AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.609 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Pfam PF10410 DnaB-helicase binding domain of primase 369 424 1.3E-12 T 29-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Gene3D G3DSA:3.40.1360.10 241 367 3.7E-33 T 29-03-2018 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 1.9E-43 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Gene3D G3DSA:3.90.980.10 109 240 4.7E-45 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 SMART SM00400 36 90 7.6E-38 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Gene3D G3DSA:1.20.50.20 368 417 1.5E-21 T 29-03-2018 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 SUPERFAMILY SSF117023 447 579 3.01E-43 T 29-03-2018 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 SMART SM00493 259 330 2.3E-21 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 SMART SM00766 450 575 1.4E-48 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 SUPERFAMILY SSF57783 4 100 8.67E-36 T 29-03-2018 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 SUPERFAMILY SSF56731 115 428 3.01E-116 T 29-03-2018 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 8.9E-152 T 29-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Pfam PF01807 CHC2 zinc finger 7 100 5.4E-41 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 1.3E-32 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Gene3D G3DSA:1.10.860.10 434 581 1.3E-38 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Pfam PF13155 Toprim-like 263 348 1.4E-14 T 29-03-2018 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 PIRSF PIRSF002811 2 580 6.7E-146 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM460_RS08140 047ff8959ea9fdf2db5662f6d407a4af 581 Gene3D G3DSA:3.90.580.10 1 101 9.1E-35 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 SUPERFAMILY SSF54631 94 203 1.64E-24 T 29-03-2018 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 SMART SM01240 7 473 0.0 T 29-03-2018 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 Pfam PF00571 CBS domain 95 140 5.4E-9 T 29-03-2018 IPR000644 CBS domain AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 Pfam PF00571 CBS domain 153 202 1.5E-4 T 29-03-2018 IPR000644 CBS domain AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 SUPERFAMILY SSF51412 217 477 1.31E-127 T 29-03-2018 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 SUPERFAMILY SSF51412 1 90 1.31E-127 T 29-03-2018 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 SMART SM00116 96 144 2.9E-11 T 29-03-2018 IPR000644 CBS domain AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 SMART SM00116 158 206 1.9E-8 T 29-03-2018 IPR000644 CBS domain AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.491 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 PIRSF PIRSF000130 1 487 1.9E-197 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.2E-201 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 3.8E-162 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM460_RS11875 f8ef0f65c290d412f98d7f0b40bc5d3e 488 Gene3D G3DSA:3.20.20.70 1 482 2.3E-116 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS23975 6c2d419723f03c21a64a58907d80b139 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 319 9.4E-135 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM460_RS23975 6c2d419723f03c21a64a58907d80b139 320 Pfam PF00762 Ferrochelatase 5 317 2.1E-110 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM460_RS23975 6c2d419723f03c21a64a58907d80b139 320 Gene3D G3DSA:3.40.50.1400 173 300 1.4E-40 T 29-03-2018 AM460_RS23975 6c2d419723f03c21a64a58907d80b139 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 29-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM460_RS23975 6c2d419723f03c21a64a58907d80b139 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.341 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM460_RS23975 6c2d419723f03c21a64a58907d80b139 320 Gene3D G3DSA:3.40.50.1400 1 172 4.7E-47 T 29-03-2018 AM460_RS23975 6c2d419723f03c21a64a58907d80b139 320 SUPERFAMILY SSF53800 4 318 7.72E-101 T 29-03-2018 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 Gene3D G3DSA:3.30.420.40 6 191 5.0E-65 T 29-03-2018 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 163.408 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 78.154 T 29-03-2018 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 SUPERFAMILY SSF53067 5 191 7.34E-65 T 29-03-2018 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 TIGRFAM TIGR00016 ackA: acetate kinase 4 393 4.1E-172 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 199 220 2.3E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 296 309 2.3E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 374 386 2.3E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 318 334 2.3E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 169 182 2.3E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 7 18 2.3E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 Pfam PF00871 Acetokinase family 7 386 2.6E-167 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 PIRSF PIRSF000722 3 397 2.4E-134 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 SUPERFAMILY SSF53067 153 392 2.33E-85 T 29-03-2018 AM460_RS07870 73c565029da097e83d016724468b1b5c 402 Gene3D G3DSA:3.30.420.40 193 400 1.4E-73 T 29-03-2018 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 29 60 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 PIRSF PIRSF006092 11 169 4.0E-46 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 Gene3D G3DSA:1.10.287.180 15 87 2.5E-29 T 29-03-2018 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 Gene3D G3DSA:3.10.50.30 88 170 1.0E-21 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 Pfam PF03449 Transcription elongation factor, N-terminal 18 86 7.6E-27 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 93 167 1.5E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 Hamap MF_00930 Transcription elongation factor GreB [greB]. 13 168 54.298 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 SUPERFAMILY SSF54534 92 167 4.32E-20 T 29-03-2018 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 14 169 1.4E-88 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 Hamap MF_00105 Transcription elongation factor GreA [greA]. 14 166 28.83 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 131 147 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM460_RS06375 54d7836f0196375657f8c86eb141a4e9 170 SUPERFAMILY SSF46557 15 90 4.32E-28 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:3.40.50.720 209 373 1.1E-46 T 29-03-2018 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 SMART SM00839 204 445 1.4E-93 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:1.10.285.10 6 61 2.9E-8 T 29-03-2018 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:1.10.285.10 374 447 6.1E-26 T 29-03-2018 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:3.40.50.10860 62 190 5.7E-54 T 29-03-2018 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 2.5E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 2.5E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.5E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 2.5E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 1.9E-87 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 PIRSF PIRSF000185 22 447 5.7E-115 T 29-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 SUPERFAMILY SSF53223 6 196 6.4E-74 T 29-03-2018 AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 SUPERFAMILY SSF51735 202 446 7.67E-77 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16200 ee572cb4202207749c31ae7a00d68cb5 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 9.1E-49 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 SUPERFAMILY SSF52172 1 108 1.01E-27 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 Pfam PF01339 CheB methylesterase 159 336 4.8E-62 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 PIRSF PIRSF000876 1 346 8.4E-138 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 Gene3D G3DSA:3.40.50.180 163 349 3.1E-79 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 SUPERFAMILY SSF52738 156 342 8.11E-75 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 Gene3D G3DSA:3.40.50.2300 1 162 3.4E-27 T 29-03-2018 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.374 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 Pfam PF00072 Response regulator receiver domain 6 109 9.1E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS15555 d8f7fd1251989ed36d2044cc08e89d80 349 SMART SM00448 4 119 8.4E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.6E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 Pfam PF03466 LysR substrate binding domain 97 279 3.4E-27 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 Gene3D G3DSA:3.40.190.10 183 262 3.8E-16 T 29-03-2018 AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 Gene3D G3DSA:1.10.10.10 9 93 2.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 SUPERFAMILY SSF46785 11 119 2.12E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 SUPERFAMILY SSF53850 96 292 7.42E-29 T 29-03-2018 AM460_RS12895 66ecc0f5626f2e285cf0c584fbe9345d 312 Gene3D G3DSA:3.40.190.10 94 182 2.9E-13 T 29-03-2018 AM460_RS27285 2e6014aa108dc9cbf4b9dddc506cfedf 272 SUPERFAMILY SSF55469 177 263 3.71E-8 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS27285 2e6014aa108dc9cbf4b9dddc506cfedf 272 SUPERFAMILY SSF55469 99 147 3.71E-8 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS27285 2e6014aa108dc9cbf4b9dddc506cfedf 272 Gene3D G3DSA:3.40.109.10 87 263 1.4E-14 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS27285 2e6014aa108dc9cbf4b9dddc506cfedf 272 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 115 258 6.8E-28 T 29-03-2018 IPR020051 SagB-type dehydrogenase domain AM460_RS27285 2e6014aa108dc9cbf4b9dddc506cfedf 272 Pfam PF00881 Nitroreductase family 91 253 1.8E-7 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM460_RS22895 9d77c70a533b14ea06ac555c8f2a2c77 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 433 6.0E-257 T 29-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AM460_RS22895 9d77c70a533b14ea06ac555c8f2a2c77 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 432 1.7E-153 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM460_RS22895 9d77c70a533b14ea06ac555c8f2a2c77 439 Hamap MF_02073 Putrescine transporter PotE [potE]. 9 436 36.456 T 29-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AM460_RS22895 9d77c70a533b14ea06ac555c8f2a2c77 439 PIRSF PIRSF006060 1 437 7.5E-48 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS22895 9d77c70a533b14ea06ac555c8f2a2c77 439 Pfam PF13520 Amino acid permease 10 408 1.5E-48 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS00575 bccec6c4dcc915caff6e34a0280453e9 225 Gene3D G3DSA:1.10.10.10 42 210 3.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00575 bccec6c4dcc915caff6e34a0280453e9 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 204 1.5E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS00575 bccec6c4dcc915caff6e34a0280453e9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS00575 bccec6c4dcc915caff6e34a0280453e9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS00575 bccec6c4dcc915caff6e34a0280453e9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS00575 bccec6c4dcc915caff6e34a0280453e9 225 SUPERFAMILY SSF46894 145 205 8.16E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS00575 bccec6c4dcc915caff6e34a0280453e9 225 SMART SM00421 150 207 4.4E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 Gene3D G3DSA:3.40.50.10860 11 140 4.9E-50 T 29-03-2018 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 SUPERFAMILY SSF53223 3 122 7.96E-41 T 29-03-2018 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 Gene3D G3DSA:3.40.50.720 141 264 2.2E-39 T 29-03-2018 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 SUPERFAMILY SSF51735 123 281 5.14E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.854 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 279 1.1E-68 T 29-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 8.1E-40 T 29-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 9.2E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 9.2E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 9.2E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 9.2E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 9.2E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 9.2E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS23680 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 9.2E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SUPERFAMILY SSF49493 115 210 1.7E-15 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Gene3D G3DSA:2.60.260.20 115 199 2.2E-16 T 29-03-2018 AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Gene3D G3DSA:2.60.260.20 204 282 8.3E-21 T 29-03-2018 AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 41 61 2.4E-17 T 29-03-2018 IPR001623 DnaJ domain AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 61 80 2.4E-17 T 29-03-2018 IPR001623 DnaJ domain AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 25 40 2.4E-17 T 29-03-2018 IPR001623 DnaJ domain AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 7 25 2.4E-17 T 29-03-2018 IPR001623 DnaJ domain AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SUPERFAMILY SSF49493 204 284 1.22E-17 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Gene3D G3DSA:1.10.287.110 1 114 9.9E-33 T 29-03-2018 IPR001623 DnaJ domain AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Gene3D G3DSA:1.20.5.460 283 304 4.1E-15 T 29-03-2018 AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Pfam PF01556 DnaJ C terminal domain 120 276 5.6E-34 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Pfam PF00226 DnaJ domain 5 66 1.9E-23 T 29-03-2018 IPR001623 DnaJ domain AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SUPERFAMILY SSF46565 1 93 2.36E-27 T 29-03-2018 IPR001623 DnaJ domain AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 29-03-2018 IPR018253 DnaJ domain, conserved site AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 57.353 T 29-03-2018 IPR023859 DNA-binding protein, curved-DNA AM460_RS20560 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SMART SM00271 4 61 3.0E-26 T 29-03-2018 IPR001623 DnaJ domain AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Pfam PF00009 Elongation factor Tu GTP binding domain 2 163 1.0E-31 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Gene3D G3DSA:1.10.10.10 548 606 8.0E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Pfam PF09106 Elongation factor SelB, winged helix 424 480 1.4E-15 T 29-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Gene3D G3DSA:1.10.10.10 417 480 6.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 SUPERFAMILY SSF46785 551 607 6.42E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Gene3D G3DSA:2.40.30.10 282 335 7.3E-8 T 29-03-2018 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Pfam PF03144 Elongation factor Tu domain 2 189 256 4.6E-9 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Gene3D G3DSA:1.10.10.10 489 545 6.8E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 SUPERFAMILY SSF46785 488 546 5.68E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 6.6E-277 T 29-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Gene3D G3DSA:2.40.30.10 172 281 3.2E-21 T 29-03-2018 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Gene3D G3DSA:3.40.50.300 50 171 1.7E-21 T 29-03-2018 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 PRINTS PR00315 GTP-binding elongation factor signature 54 64 2.1E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 PRINTS PR00315 GTP-binding elongation factor signature 2 15 2.1E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 PRINTS PR00315 GTP-binding elongation factor signature 70 81 2.1E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 PRINTS PR00315 GTP-binding elongation factor signature 107 116 2.1E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Pfam PF09107 Elongation factor SelB, winged helix 560 605 1.3E-19 T 29-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 Gene3D G3DSA:3.40.50.300 1 49 8.4E-8 T 29-03-2018 AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 SUPERFAMILY SSF52540 2 165 2.35E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 SUPERFAMILY SSF46785 417 484 1.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 SUPERFAMILY SSF50465 272 351 3.41E-7 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM460_RS05300 e21020a01f8217767d2c7bc02170a131 614 SUPERFAMILY SSF50447 175 293 2.16E-25 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS15535 fd56555bf7be884ab313102eaabc0485 167 Pfam PF01584 CheW-like domain 18 154 7.6E-36 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM460_RS15535 fd56555bf7be884ab313102eaabc0485 167 Gene3D G3DSA:2.30.30.40 100 145 2.9E-17 T 29-03-2018 AM460_RS15535 fd56555bf7be884ab313102eaabc0485 167 SUPERFAMILY SSF50341 15 156 5.23E-39 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM460_RS15535 fd56555bf7be884ab313102eaabc0485 167 SMART SM00260 14 151 6.2E-49 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM460_RS15535 fd56555bf7be884ab313102eaabc0485 167 Gene3D G3DSA:2.40.50.180 35 99 7.1E-19 T 29-03-2018 AM460_RS19880 ed5aa1c9ddc9a01bfefe64eaea426b0c 217 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 216 1.0E-60 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS19880 ed5aa1c9ddc9a01bfefe64eaea426b0c 217 SUPERFAMILY SSF55120 38 215 1.41E-42 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS19880 ed5aa1c9ddc9a01bfefe64eaea426b0c 217 Pfam PF00849 RNA pseudouridylate synthase 41 186 3.1E-13 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS19880 ed5aa1c9ddc9a01bfefe64eaea426b0c 217 Gene3D G3DSA:3.30.70.1560 120 202 4.4E-24 T 29-03-2018 AM460_RS19880 ed5aa1c9ddc9a01bfefe64eaea426b0c 217 Gene3D G3DSA:3.30.70.580 36 119 1.2E-14 T 29-03-2018 AM460_RS19880 ed5aa1c9ddc9a01bfefe64eaea426b0c 217 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS26610 c619a71f5d3c467247a2f91195df9b5a 183 Pfam PF13091 PLD-like domain 50 175 1.6E-27 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS26610 c619a71f5d3c467247a2f91195df9b5a 183 SUPERFAMILY SSF56024 35 181 4.04E-38 T 29-03-2018 AM460_RS26610 c619a71f5d3c467247a2f91195df9b5a 183 Gene3D G3DSA:3.30.870.10 31 183 5.6E-30 T 29-03-2018 AM460_RS20185 46323683d221a3fef79dc2d8eaadeac4 401 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 383 4.2E-97 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM460_RS20185 46323683d221a3fef79dc2d8eaadeac4 401 Pfam PF00460 Flagella basal body rod protein 4 33 1.1E-11 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM460_RS20185 46323683d221a3fef79dc2d8eaadeac4 401 Pfam PF07559 Flagellar basal body protein FlaE 173 282 1.0E-20 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AM460_RS20185 46323683d221a3fef79dc2d8eaadeac4 401 SUPERFAMILY SSF117143 73 362 7.72E-85 T 29-03-2018 AM460_RS20185 46323683d221a3fef79dc2d8eaadeac4 401 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 323 400 2.5E-20 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM460_RS20185 46323683d221a3fef79dc2d8eaadeac4 401 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM460_RS20185 46323683d221a3fef79dc2d8eaadeac4 401 Gene3D G3DSA:2.60.98.20 146 283 2.8E-29 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 Gene3D G3DSA:3.50.50.60 2 393 1.0E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 3.2E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 3.2E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 3.2E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.2E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.2E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 3.2E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 6.5E-10 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 Pfam PF01266 FAD dependent oxidoreductase 10 359 8.9E-52 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 539 3.7E-266 T 29-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM460_RS13125 37852bd610e82ac3700426873a8d468d 542 SUPERFAMILY SSF51905 9 322 5.09E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS19225 e50788e300c5f966ce522c81738380f5 375 Gene3D G3DSA:3.40.1350.10 40 171 1.5E-10 T 29-03-2018 AM460_RS12440 266e85c64791e7c0e3eb19ffc0a4c7f6 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 2.9E-143 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM460_RS12440 266e85c64791e7c0e3eb19ffc0a4c7f6 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 296 1.3E-118 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM460_RS12440 266e85c64791e7c0e3eb19ffc0a4c7f6 306 PIRSF PIRSF026649 3 305 1.1E-92 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM460_RS12440 266e85c64791e7c0e3eb19ffc0a4c7f6 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 305 69.52 T 29-03-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 AM460_RS12440 266e85c64791e7c0e3eb19ffc0a4c7f6 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 305 49.245 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 Gene3D G3DSA:3.20.20.60 316 543 2.0E-72 T 29-03-2018 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.2E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 4.8E-127 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 8.2E-30 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 Gene3D G3DSA:3.50.30.10 145 277 3.3E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 PIRSF PIRSF000732 1 574 1.5E-218 T 29-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 SUPERFAMILY SSF47831 24 143 3.92E-34 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.5E-31 T 29-03-2018 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.5E-31 T 29-03-2018 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.5E-31 T 29-03-2018 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.5E-31 T 29-03-2018 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 Gene3D G3DSA:1.10.274.10 24 144 1.3E-36 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 9.9E-274 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 SUPERFAMILY SSF51621 249 549 2.62E-110 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 Gene3D G3DSA:3.20.20.60 278 315 7.2E-15 T 29-03-2018 AM460_RS12245 15bee38ceddf313e820c96428f194200 575 SUPERFAMILY SSF52009 125 246 4.58E-37 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS05045 957368e42b98dad4dc7704bf5ba11925 198 SUPERFAMILY SSF46689 5 86 4.39E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS05045 957368e42b98dad4dc7704bf5ba11925 198 Gene3D G3DSA:1.10.10.60 2 60 1.4E-10 T 29-03-2018 AM460_RS05045 957368e42b98dad4dc7704bf5ba11925 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.994 T 29-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AM460_RS05045 957368e42b98dad4dc7704bf5ba11925 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 5.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS05045 957368e42b98dad4dc7704bf5ba11925 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS05045 957368e42b98dad4dc7704bf5ba11925 198 Gene3D G3DSA:1.10.357.10 61 195 5.7E-17 T 29-03-2018 AM460_RS05045 957368e42b98dad4dc7704bf5ba11925 198 SUPERFAMILY SSF48498 84 193 2.78E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 Pfam PF13247 4Fe-4S dicluster domain 84 181 5.3E-24 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 7.2E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 SUPERFAMILY SSF54862 36 215 1.26E-63 T 29-03-2018 AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 Pfam PF00037 4Fe-4S binding domain 40 56 1.5E-4 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 Gene3D G3DSA:3.30.70.20 107 144 3.4E-18 T 29-03-2018 AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 Gene3D G3DSA:3.30.70.20 50 106 1.2E-16 T 29-03-2018 AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 222 2.8E-125 T 29-03-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 Gene3D G3DSA:3.30.70.20 22 49 3.0E-4 T 29-03-2018 AM460_RS02515 533b84f35a8227db8a345dffbf53e683 223 Gene3D G3DSA:3.30.70.20 145 218 1.6E-24 T 29-03-2018 AM460_RS12765 f9427d79caa87084263037a75506f088 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 346 8.8E-7 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 29-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 Pfam PF08245 Mur ligase middle domain 54 196 2.5E-10 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 PIRSF PIRSF001563 6 419 2.6E-108 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 1.6E-114 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 Gene3D G3DSA:3.90.190.20 288 422 7.6E-30 T 29-03-2018 AM460_RS12765 f9427d79caa87084263037a75506f088 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 29-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 SUPERFAMILY SSF53623 13 284 1.4E-88 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 Gene3D G3DSA:3.40.1190.10 2 287 1.1E-76 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS12765 f9427d79caa87084263037a75506f088 422 SUPERFAMILY SSF53244 286 414 4.58E-34 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 5.4E-12 T 29-03-2018 IPR000014 PAS domain AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 SMART SM00086 80 121 2.8E-5 T 29-03-2018 IPR001610 PAC motif AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 Pfam PF08447 PAS fold 31 113 7.4E-17 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 SUPERFAMILY SSF58104 233 505 3.27E-61 T 29-03-2018 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 Gene3D G3DSA:1.10.287.950 314 506 1.9E-40 T 29-03-2018 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 Gene3D G3DSA:1.10.287.950 207 313 3.5E-7 T 29-03-2018 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 SMART SM00283 259 506 2.6E-92 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.7E-40 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 1.7E-40 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.7E-40 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.7E-40 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 472 6.2E-46 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 Gene3D G3DSA:3.40.50.10600 8 129 7.1E-29 T 29-03-2018 AM460_RS08100 b2addee1ea79b062f1bb90d594ca326c 506 SUPERFAMILY SSF55785 21 114 8.2E-25 T 29-03-2018 IPR000014 PAS domain AM460_RS06175 323878b039d26544ed9273721a601b75 577 SUPERFAMILY SSF56235 38 569 1.23E-196 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 159 178 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 141 159 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 453 468 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 288 307 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 477 494 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 68 93 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 258 274 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 430 9.7E-81 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 388 412 - T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 46 568 8.8E-236 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS06175 323878b039d26544ed9273721a601b75 577 Pfam PF01019 Gamma-glutamyltranspeptidase 61 569 3.0E-191 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 Gene3D G3DSA:3.40.190.10 193 281 4.7E-26 T 29-03-2018 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 1.0E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 1.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 1.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 1.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 Pfam PF03466 LysR substrate binding domain 104 308 1.3E-40 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 Gene3D G3DSA:3.40.190.10 104 192 2.7E-13 T 29-03-2018 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 SUPERFAMILY SSF46785 17 96 1.17E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 SUPERFAMILY SSF53850 106 308 2.17E-43 T 29-03-2018 AM460_RS24895 9c15e89ed2560690a8feeee52bc07c26 311 Gene3D G3DSA:1.10.10.10 4 103 8.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20135 86377c39744182463b0635af7454c685 319 SUPERFAMILY SSF55120 95 316 1.76E-67 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS20135 86377c39744182463b0635af7454c685 319 SMART SM00363 20 79 9.9E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS20135 86377c39744182463b0635af7454c685 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 316 2.2E-101 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS20135 86377c39744182463b0635af7454c685 319 Gene3D G3DSA:3.10.290.10 8 79 2.0E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS20135 86377c39744182463b0635af7454c685 319 SUPERFAMILY SSF55174 19 70 4.56E-9 T 29-03-2018 AM460_RS20135 86377c39744182463b0635af7454c685 319 Pfam PF00849 RNA pseudouridylate synthase 101 249 1.4E-29 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS20135 86377c39744182463b0635af7454c685 319 Pfam PF01479 S4 domain 20 66 1.7E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS20135 86377c39744182463b0635af7454c685 319 Gene3D G3DSA:3.30.2350.10 92 319 3.1E-69 T 29-03-2018 AM460_RS20135 86377c39744182463b0635af7454c685 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS21220 c0164b100a5931873c65d2e908e65fc1 115 Gene3D G3DSA:3.10.450.40 9 113 3.5E-19 T 29-03-2018 AM460_RS21220 c0164b100a5931873c65d2e908e65fc1 115 Pfam PF04965 Gene 25-like lysozyme 21 94 4.8E-11 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM460_RS21220 c0164b100a5931873c65d2e908e65fc1 115 SUPERFAMILY SSF160719 16 102 3.79E-22 T 29-03-2018 AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 SUPERFAMILY SSF100950 84 236 1.26E-13 T 29-03-2018 AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 Pfam PF00455 DeoR C terminal sensor domain 84 235 1.3E-29 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 SMART SM01134 75 236 1.1E-34 T 29-03-2018 AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 Pfam PF08220 DeoR-like helix-turn-helix domain 8 52 1.0E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 SMART SM00420 8 59 0.0011 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 Gene3D G3DSA:3.40.50.1360 77 235 1.4E-16 T 29-03-2018 AM460_RS01250 6ccab6848f665d1731a27753a32598b6 260 Gene3D G3DSA:1.10.10.10 1 65 8.5E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24140 e0765e64751f94d38385136eeda977e4 566 Gene3D G3DSA:3.90.76.10 140 258 2.0E-16 T 29-03-2018 AM460_RS24140 e0765e64751f94d38385136eeda977e4 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 2.4E-39 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AM460_RS24140 e0765e64751f94d38385136eeda977e4 566 Gene3D G3DSA:1.10.10.10 1 139 9.8E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24140 e0765e64751f94d38385136eeda977e4 566 Gene3D G3DSA:3.10.105.10 354 532 8.5E-7 T 29-03-2018 AM460_RS24140 e0765e64751f94d38385136eeda977e4 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 303 1.4E-15 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS24140 e0765e64751f94d38385136eeda977e4 566 SUPERFAMILY SSF53850 115 561 3.26E-56 T 29-03-2018 AM460_RS24140 e0765e64751f94d38385136eeda977e4 566 Gene3D G3DSA:3.40.190.10 259 305 3.8E-4 T 29-03-2018 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 Gene3D G3DSA:3.30.420.40 236 484 4.8E-40 T 29-03-2018 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 54.414 T 29-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 7.5E-26 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 SUPERFAMILY SSF53067 252 472 2.59E-31 T 29-03-2018 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 460 1.2E-242 T 29-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 1.6E-28 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 Gene3D G3DSA:3.30.420.40 1 235 5.2E-49 T 29-03-2018 AM460_RS03555 397c671108e36eb4bd7eece662022242 489 SUPERFAMILY SSF53067 7 245 6.91E-49 T 29-03-2018 AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 Gene3D G3DSA:3.40.50.620 2 178 2.0E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 SUPERFAMILY SSF52467 189 309 6.95E-42 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 PIRSF PIRSF000089 3 312 2.1E-85 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 4.9E-28 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 SMART SM00893 5 180 1.6E-13 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 Pfam PF01012 Electron transfer flavoprotein domain 24 167 1.0E-18 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 Gene3D G3DSA:3.40.50.1220 185 312 3.2E-46 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS16540 3b8a2eed8560226e2e97056b4392edbd 312 SUPERFAMILY SSF52402 6 181 1.88E-27 T 29-03-2018 AM460_RS26280 fd663c367297cadbd81e4c8b4dbfb5a7 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.131 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM460_RS26280 fd663c367297cadbd81e4c8b4dbfb5a7 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 2.4E-100 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM460_RS26280 fd663c367297cadbd81e4c8b4dbfb5a7 316 Pfam PF02401 LytB protein 3 282 1.7E-92 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SMART SM00634 803 889 0.47 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SMART SM00634 1106 1197 2.6E-5 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SMART SM00634 1208 1302 0.0011 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SMART SM00634 901 992 4.0E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SMART SM00634 1001 1093 2.0E-5 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 576 668 1.7E-8 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF02369 Bacterial Ig-like domain (group 1) 1004 1091 9.7E-8 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF02369 Bacterial Ig-like domain (group 1) 906 991 1.5E-8 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 PRINTS PR01369 Intimin signature 214 233 2.2E-10 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 PRINTS PR01369 Intimin signature 282 301 2.2E-10 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 PRINTS PR01369 Intimin signature 186 201 2.2E-10 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 1209 1300 6.08E-10 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 617 740 1.4E-9 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 502 616 1.2E-10 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 741 841 4.6E-6 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 842 946 2.3E-17 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 1252 1360 5.5E-11 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 1149 1251 1.5E-8 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 329 501 4.2E-14 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 947 1043 1.2E-8 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Gene3D G3DSA:2.60.120.260 1044 1148 4.5E-15 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF09134 Invasin, domain 3 445 555 1.0E-10 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF09134 Invasin, domain 3 1105 1195 2.1E-7 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF09134 Invasin, domain 3 564 674 1.1E-10 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF09134 Invasin, domain 3 817 894 1.4E-9 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF09134 Invasin, domain 3 683 788 1.2E-10 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 457 549 3.4E-9 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 902 995 3.14E-15 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 695 786 2.28E-8 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 1014 1102 2.55E-10 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 1099 1185 4.32E-12 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 Pfam PF11924 Inverse autotransporter, beta-domain 59 334 1.2E-104 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain AM460_RS19780 1138f784413ebd9280f0bd2c2225d675 1421 SUPERFAMILY SSF49373 802 889 1.05E-7 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.5E-19 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Gene3D G3DSA:2.30.38.10 430 515 3.0E-12 T 29-03-2018 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Gene3D G3DSA:3.40.50.980 267 429 8.7E-39 T 29-03-2018 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.7E-26 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.352 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Pfam PF00501 AMP-binding enzyme 83 522 7.3E-96 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Gene3D G3DSA:3.40.50.980 74 266 1.2E-54 T 29-03-2018 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 SUPERFAMILY SSF56801 11 643 5.63E-192 T 29-03-2018 AM460_RS02540 16fe334fd3428a553833c2aa575dac05 652 Gene3D G3DSA:3.30.300.30 518 650 4.3E-28 T 29-03-2018 AM460_RS19020 257c3a233f45544665edde813161b54b 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 277 1.2E-107 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM460_RS19020 257c3a233f45544665edde813161b54b 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 275 47.418 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM460_RS19020 257c3a233f45544665edde813161b54b 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 1.7E-90 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM460_RS19020 257c3a233f45544665edde813161b54b 277 Gene3D G3DSA:3.40.50.150 85 276 5.6E-45 T 29-03-2018 AM460_RS19020 257c3a233f45544665edde813161b54b 277 Gene3D G3DSA:1.10.8.10 1 84 2.3E-22 T 29-03-2018 AM460_RS19020 257c3a233f45544665edde813161b54b 277 SUPERFAMILY SSF53335 3 275 2.22E-60 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS19020 257c3a233f45544665edde813161b54b 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS19020 257c3a233f45544665edde813161b54b 277 Pfam PF13847 Methyltransferase domain 108 243 1.9E-20 T 29-03-2018 IPR025714 Methyltransferase domain AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 SUPERFAMILY SSF51735 102 298 1.34E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 Gene3D G3DSA:3.40.50.720 1 112 7.2E-29 T 29-03-2018 AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 SUPERFAMILY SSF52283 2 135 1.89E-45 T 29-03-2018 AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 Gene3D G3DSA:3.40.50.720 113 300 9.0E-52 T 29-03-2018 AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 5.2E-35 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 3.7E-53 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM460_RS17850 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 1.6E-27 T 29-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 SUPERFAMILY SSF52283 4 110 1.36E-18 T 29-03-2018 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 256 4.1E-32 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.764 T 29-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 Gene3D G3DSA:3.40.50.720 1 107 8.7E-22 T 29-03-2018 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 280 2.4E-17 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 Gene3D G3DSA:3.40.50.720 108 259 1.1E-30 T 29-03-2018 AM460_RS12740 44e4990043d9dfeac0a470b1e2a2fd59 378 SUPERFAMILY SSF51735 91 257 7.49E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 SUPERFAMILY SSF103515 1013 1295 4.71E-45 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 Gene3D G3DSA:2.160.20.20 635 971 1.2E-19 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 Gene3D G3DSA:2.160.20.20 309 634 1.9E-6 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 Pfam PF03797 Autotransporter beta-domain 1036 1273 3.8E-36 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 7.8E-7 T 29-03-2018 IPR024973 ESPR domain AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 Gene3D G3DSA:2.40.128.130 991 1295 4.8E-50 T 29-03-2018 AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 SMART SM00869 1033 1284 4.9E-33 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 Pfam PF02395 Immunoglobulin A1 protease 55 517 1.2E-39 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 SUPERFAMILY SSF51126 382 676 1.54E-61 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 SUPERFAMILY SSF51126 710 991 1.54E-61 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS09135 7678e5ea3576f5cc825d9b477a9a3ca5 1295 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 885 1295 3.2E-70 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 SUPERFAMILY SSF55874 316 479 1.7E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 479 5.2E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 Pfam PF00672 HAMP domain 211 256 3.0E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 479 9.8E-158 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 SMART SM00388 261 327 3.7E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 SUPERFAMILY SSF47384 244 328 6.28E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 326 3.5E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 Gene3D G3DSA:1.10.287.130 251 323 2.9E-11 T 29-03-2018 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 SMART SM00387 371 480 6.6E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 SMART SM00304 207 260 4.3E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS23625 2e54720ac5b381990407865e4da681e9 480 Gene3D G3DSA:3.30.565.10 331 480 3.7E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04035 ac224392766194c7404df0716e313ec4 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 3.7E-93 T 29-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AM460_RS04035 ac224392766194c7404df0716e313ec4 299 SUPERFAMILY SSF103481 199 278 1.19E-9 T 29-03-2018 AM460_RS04035 ac224392766194c7404df0716e313ec4 299 Pfam PF00892 EamA-like transporter family 139 274 7.9E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS04035 ac224392766194c7404df0716e313ec4 299 Pfam PF00892 EamA-like transporter family 2 128 9.2E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS04035 ac224392766194c7404df0716e313ec4 299 SUPERFAMILY SSF103481 35 130 4.71E-6 T 29-03-2018 AM460_RS06870 88dcf3c63abf6783733af222cd11271c 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 7.0E-55 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM460_RS06870 88dcf3c63abf6783733af222cd11271c 123 Gene3D G3DSA:2.40.150.20 1 123 2.1E-53 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM460_RS06870 88dcf3c63abf6783733af222cd11271c 123 SMART SM01374 1 123 3.7E-86 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM460_RS06870 88dcf3c63abf6783733af222cd11271c 123 SUPERFAMILY SSF50193 2 122 2.35E-51 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM460_RS06870 88dcf3c63abf6783733af222cd11271c 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.5E-60 T 29-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM460_RS06870 88dcf3c63abf6783733af222cd11271c 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.628 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM460_RS06870 88dcf3c63abf6783733af222cd11271c 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 29-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS18230 e8f545b716abc8c33b9b3ea714c919e1 108 Gene3D G3DSA:3.30.780.10 16 106 2.4E-19 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM460_RS18230 e8f545b716abc8c33b9b3ea714c919e1 108 Pfam PF01253 Translation initiation factor SUI1 32 101 5.3E-18 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM460_RS18230 e8f545b716abc8c33b9b3ea714c919e1 108 PIRSF PIRSF037511 1 108 2.9E-36 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM460_RS18230 e8f545b716abc8c33b9b3ea714c919e1 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.9E-39 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM460_RS18230 e8f545b716abc8c33b9b3ea714c919e1 108 SUPERFAMILY SSF55159 6 104 6.15E-25 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM460_RS17405 2e1e239ee31e0d8f390015fee23077a6 304 SUPERFAMILY SSF49401 25 182 2.61E-65 T 29-03-2018 IPR008966 Adhesion domain AM460_RS17405 2e1e239ee31e0d8f390015fee23077a6 304 Pfam PF09160 FimH, mannose binding 27 171 9.4E-68 T 29-03-2018 IPR015243 FimH, mannose-binding domain AM460_RS17405 2e1e239ee31e0d8f390015fee23077a6 304 SUPERFAMILY SSF49401 184 304 8.45E-23 T 29-03-2018 IPR008966 Adhesion domain AM460_RS17405 2e1e239ee31e0d8f390015fee23077a6 304 Gene3D G3DSA:2.60.40.1090 25 182 1.6E-52 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17405 2e1e239ee31e0d8f390015fee23077a6 304 Gene3D G3DSA:2.60.40.1090 183 304 1.3E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS03895 017f531b107ee6dcbb23ce75ebddec0e 171 Gene3D G3DSA:1.20.120.290 33 118 0.0011 T 29-03-2018 AM460_RS03895 017f531b107ee6dcbb23ce75ebddec0e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-33 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM460_RS03895 017f531b107ee6dcbb23ce75ebddec0e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-33 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM460_RS03895 017f531b107ee6dcbb23ce75ebddec0e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-33 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM460_RS03895 017f531b107ee6dcbb23ce75ebddec0e 171 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 6.2E-32 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM460_RS03895 017f531b107ee6dcbb23ce75ebddec0e 171 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 143 19.419 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 Gene3D G3DSA:3.40.50.970 167 516 1.7E-94 T 29-03-2018 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 SUPERFAMILY SSF52518 575 791 4.04E-52 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 PIRSF PIRSF000157 1 932 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 SUPERFAMILY SSF52518 121 546 8.1E-89 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 Gene3D G3DSA:1.10.287.1150 83 166 1.6E-24 T 29-03-2018 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 SMART SM00861 591 784 1.6E-65 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 Pfam PF02779 Transketolase, pyrimidine binding domain 591 785 4.7E-67 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 788 930 9.4E-54 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 Pfam PF00676 Dehydrogenase E1 component 218 511 1.2E-48 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 Gene3D G3DSA:3.40.50.970 591 800 4.4E-58 T 29-03-2018 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 930 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM460_RS22720 1c310b35f44f6fcad358fdcd4b8ccdde 933 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.9E-15 T 29-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 114 306 3.8E-23 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 SUPERFAMILY SSF56091 25 305 1.6E-65 T 29-03-2018 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 SMART SM00532 29 425 3.2E-130 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 124 153 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 321 336 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Hamap MF_01587 DNA ligase B [ligB]. 3 558 52.061 T 29-03-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Gene3D G3DSA:1.10.150.20 480 540 0.0027 T 29-03-2018 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Gene3D G3DSA:1.10.287.610 22 84 2.6E-13 T 29-03-2018 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Gene3D G3DSA:3.30.470.30 128 264 2.8E-16 T 29-03-2018 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 SUPERFAMILY SSF50249 310 386 6.68E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Gene3D G3DSA:1.10.150.20 409 479 1.7E-8 T 29-03-2018 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Gene3D G3DSA:2.40.50.140 308 380 2.5E-16 T 29-03-2018 AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 SUPERFAMILY SSF47781 404 556 3.95E-19 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS05015 7863e924cb7f049ac59287f7cf3a350e 560 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 385 4.0E-18 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM460_RS20925 04ff47613ead4158806335f8accfa6ef 297 SUPERFAMILY SSF56112 4 270 7.65E-27 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS20925 04ff47613ead4158806335f8accfa6ef 297 Gene3D G3DSA:1.20.1050.20 78 192 1.6E-4 T 29-03-2018 AM460_RS20925 04ff47613ead4158806335f8accfa6ef 297 Pfam PF01636 Phosphotransferase enzyme family 64 238 3.4E-6 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.6E-24 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 PIRSF PIRSF009393 1 719 3.3E-290 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.1E-48 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 29-03-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 SUPERFAMILY SSF55904 571 718 1.44E-47 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 3.3E-200 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 Gene3D G3DSA:3.90.1150.10 421 600 5.8E-51 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 Gene3D G3DSA:3.90.100.10 601 727 3.1E-39 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 Gene3D G3DSA:3.40.640.10 109 419 1.6E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 SUPERFAMILY SSF53383 109 567 6.66E-120 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 SUPERFAMILY SSF52172 1 107 1.39E-36 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 Gene3D G3DSA:3.40.50.220 3 107 1.2E-37 T 29-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM460_RS22890 74aa8a7b5fd45cb1cea318e812ff1c07 732 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 Gene3D G3DSA:3.40.50.1220 199 348 2.6E-50 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 SUPERFAMILY SSF52518 366 560 1.91E-66 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 Gene3D G3DSA:3.40.50.970 349 551 3.6E-51 T 29-03-2018 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 178 5.3E-57 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 2.1E-48 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 2.4E-201 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 Gene3D G3DSA:3.40.50.970 6 198 1.5E-61 T 29-03-2018 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 SUPERFAMILY SSF52518 10 185 5.31E-59 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 7.0E-44 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM460_RS04830 b3a9e4043cd163dd6ed5b5363614782d 562 SUPERFAMILY SSF52467 165 361 1.64E-56 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS17555 a9c50c4780c003137754cf8ddef4599f 231 Gene3D G3DSA:1.10.3480.10 21 205 9.2E-30 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS17555 a9c50c4780c003137754cf8ddef4599f 231 Pfam PF02613 Nitrate reductase delta subunit 44 151 9.0E-11 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS17555 a9c50c4780c003137754cf8ddef4599f 231 SUPERFAMILY SSF89155 2 156 2.88E-26 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS17555 a9c50c4780c003137754cf8ddef4599f 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 3.9E-34 T 29-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Pfam PF00905 Penicillin binding protein transpeptidase domain 473 714 1.2E-24 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Pfam PF00912 Transglycosylase 209 380 2.8E-54 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 SUPERFAMILY SSF53955 196 403 2.14E-65 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 SUPERFAMILY SSF56601 412 778 6.76E-104 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 SUPERFAMILY SSF56601 362 384 6.76E-104 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Pfam PF14814 Bifunctional transglycosylase second domain 113 197 1.0E-27 T 29-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 PIRSF PIRSF002799 13 840 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 68 795 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 79 1.9E-26 T 29-03-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Gene3D G3DSA:3.40.710.10 404 829 7.2E-98 T 29-03-2018 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Gene3D G3DSA:3.30.2060.10 112 198 3.1E-27 T 29-03-2018 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Gene3D G3DSA:1.10.3810.10 199 397 1.7E-61 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS25580 57f026e28f6840b4f848b3ddf97c40f3 841 Gene3D G3DSA:1.20.5.100 57 95 3.7E-17 T 29-03-2018 AM460_RS18100 9b875f158a8efa9d47cded8a23df00bd 73 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 3.1E-32 T 29-03-2018 IPR014321 Phage shock protein, PspD AM460_RS18100 9b875f158a8efa9d47cded8a23df00bd 73 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 8.7E-36 T 29-03-2018 IPR014321 Phage shock protein, PspD AM460_RS23760 b14a7fe134771d2b7bde02778e4ec1e6 261 Gene3D G3DSA:2.60.120.10 1 261 8.2E-41 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS23760 b14a7fe134771d2b7bde02778e4ec1e6 261 Pfam PF07883 Cupin domain 184 230 2.7E-7 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM460_RS23760 b14a7fe134771d2b7bde02778e4ec1e6 261 Pfam PF05899 Protein of unknown function (DUF861) 56 136 2.2E-11 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM460_RS23760 b14a7fe134771d2b7bde02778e4ec1e6 261 SUPERFAMILY SSF51182 11 261 6.44E-67 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS23760 b14a7fe134771d2b7bde02778e4ec1e6 261 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 3 260 2.2E-115 T 29-03-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Gene3D G3DSA:1.20.120.330 190 334 1.4E-24 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Pfam PF01909 Nucleotidyltransferase domain 86 137 9.9E-7 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Pfam PF01966 HD domain 468 601 1.5E-14 T 29-03-2018 IPR006674 HD domain AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 890 349.313 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 SMART SM00471 464 611 3.1E-12 T 29-03-2018 IPR003607 HD/PDEase domain AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Pfam PF08335 GlnD PII-uridylyltransferase 193 331 1.9E-36 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Gene3D G3DSA:3.30.70.260 809 886 1.7E-10 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Gene3D G3DSA:3.30.70.260 699 792 8.1E-9 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Gene3D G3DSA:1.10.3090.10 360 663 4.3E-37 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 SUPERFAMILY SSF109604 446 628 8.0E-13 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 PIRSF PIRSF006288 26 889 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 SUPERFAMILY SSF55021 705 761 5.83E-9 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 SUPERFAMILY SSF81301 31 189 1.96E-21 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 SUPERFAMILY SSF55021 815 874 4.2E-9 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Gene3D G3DSA:3.30.460.10 52 186 1.4E-23 T 29-03-2018 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Pfam PF01842 ACT domain 817 874 1.2E-8 T 29-03-2018 IPR002912 ACT domain AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 Pfam PF01842 ACT domain 709 758 4.8E-7 T 29-03-2018 IPR002912 ACT domain AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 884 3.4E-303 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM460_RS25475 8a26b806abeb191dd3e2592ef0996e8c 890 SUPERFAMILY SSF81593 213 328 1.18E-9 T 29-03-2018 AM460_RS23820 f1ee95485472b026ff49e7abc26a3e55 222 Pfam PF11153 Protein of unknown function (DUF2931) 8 220 7.3E-41 T 29-03-2018 IPR021326 Protein of unknown function DUF2931 AM460_RS12840 53125c9d93bd98e258222dccef54316e 180 Gene3D G3DSA:3.90.79.10 1 180 1.6E-39 T 29-03-2018 AM460_RS12840 53125c9d93bd98e258222dccef54316e 180 SUPERFAMILY SSF55811 9 166 3.93E-36 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS12840 53125c9d93bd98e258222dccef54316e 180 PIRSF PIRSF017340 1 171 8.1E-76 T 29-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 AM460_RS12840 53125c9d93bd98e258222dccef54316e 180 Pfam PF00293 NUDIX domain 36 154 3.2E-18 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS19605 2ac6abec56b2dd5a4cd58be6cec71dc8 247 Gene3D G3DSA:3.90.1720.10 108 228 3.2E-18 T 29-03-2018 AM460_RS19605 2ac6abec56b2dd5a4cd58be6cec71dc8 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 101 2.5E-13 T 29-03-2018 IPR028090 JAB domain, prokaryotic AM460_RS19605 2ac6abec56b2dd5a4cd58be6cec71dc8 247 SUPERFAMILY SSF54001 101 226 1.08E-16 T 29-03-2018 AM460_RS19605 2ac6abec56b2dd5a4cd58be6cec71dc8 247 SMART SM00232 1 119 0.002 T 29-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AM460_RS19605 2ac6abec56b2dd5a4cd58be6cec71dc8 247 SUPERFAMILY SSF102712 6 97 1.57E-16 T 29-03-2018 AM460_RS19605 2ac6abec56b2dd5a4cd58be6cec71dc8 247 Gene3D G3DSA:3.40.140.10 3 107 8.9E-14 T 29-03-2018 AM460_RS19605 2ac6abec56b2dd5a4cd58be6cec71dc8 247 Pfam PF00877 NlpC/P60 family 112 223 7.4E-13 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 SUPERFAMILY SSF55347 132 319 2.74E-51 T 29-03-2018 AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 117 1.9E-25 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 Gene3D G3DSA:3.30.360.10 144 314 2.8E-45 T 29-03-2018 AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 SUPERFAMILY SSF51735 5 157 5.4E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 PIRSF PIRSF000148 4 337 4.0E-101 T 29-03-2018 AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 SMART SM00859 6 121 4.4E-32 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 3.9E-42 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS12745 d1eabbf04fdbf7b2a7838df64344bd29 337 Gene3D G3DSA:3.40.50.720 1 143 1.7E-29 T 29-03-2018 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 Hamap MF_01644 D-phenylhydantoinase [hyuA]. 1 461 99.249 T 29-03-2018 IPR023766 D-phenylhydantoinase GO:0005737|GO:0006208|GO:0016812 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 453 2.7E-201 T 29-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 SUPERFAMILY SSF51556 54 381 5.3E-95 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 SUPERFAMILY SSF51338 1 64 8.33E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 Pfam PF01979 Amidohydrolase family 50 434 1.4E-21 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 Gene3D G3DSA:3.20.20.140 278 422 4.8E-42 T 29-03-2018 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 Gene3D G3DSA:3.20.20.140 60 277 9.0E-51 T 29-03-2018 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 Gene3D G3DSA:2.30.40.10 1 59 2.1E-12 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS09820 22d068db1754cca290da2cd505ab97d9 461 SUPERFAMILY SSF51338 350 456 3.51E-36 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS19640 b13301bebc114ffb5d061824ea58272c 131 SUPERFAMILY SSF143749 2 130 5.75E-49 T 29-03-2018 IPR009312 Minor tail protein U-like AM460_RS19640 b13301bebc114ffb5d061824ea58272c 131 Pfam PF06141 Phage minor tail protein U 1 129 7.4E-49 T 29-03-2018 IPR009312 Minor tail protein U-like AM460_RS11580 f043a217724589dd5ee675ce3a6abd86 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 5.9E-41 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM460_RS11580 f043a217724589dd5ee675ce3a6abd86 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.669 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM460_RS11580 f043a217724589dd5ee675ce3a6abd86 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 4.2E-61 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM460_RS11580 f043a217724589dd5ee675ce3a6abd86 126 SUPERFAMILY SSF56214 3 125 1.29E-29 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS11580 f043a217724589dd5ee675ce3a6abd86 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 5.4E-24 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS11580 f043a217724589dd5ee675ce3a6abd86 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 23 87 9.0E-33 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM460_RS11580 f043a217724589dd5ee675ce3a6abd86 126 Gene3D G3DSA:3.90.470.20 1 126 8.1E-37 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:1.10.8.70 317 360 4.2E-12 T 29-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.1E-124 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:3.40.50.620 119 230 1.2E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 SUPERFAMILY SSF52374 3 298 4.56E-114 T 29-03-2018 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 SUPERFAMILY SSF48163 299 461 8.76E-46 T 29-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.996 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 463 2.1E-212 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:3.40.50.620 3 118 1.9E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:1.10.10.350 366 471 5.8E-25 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM460_RS12335 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:1.10.1160.10 232 314 9.0E-35 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 429 535 1.72E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 274 348 2.5E-27 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 361 435 2.3E-20 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 182 266 2.5E-26 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 105 178 2.7E-7 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 190 260 2.8E-28 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 19 87 6.8E-5 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 449 520 2.9E-22 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 275 347 2.2E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 362 434 3.4E-21 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 103 171 2.0E-8 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 1 92 8.2E-8 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 362 443 1.56E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 1 112 9.43E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 255 371 1.03E-31 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.3E-99 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 PIRSF PIRSF002111 1 534 3.3E-221 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 106 185 3.43E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 451 550 4.3E-20 T 29-03-2018 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 104 171 8.3E-10 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 449 520 4.6E-18 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 20 78 7.8E-7 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20965 3a715b3d0635089e27f33e920bee8f54 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.4E-241 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 Pfam PF03472 Autoinducer binding domain 23 158 1.2E-32 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 Gene3D G3DSA:1.10.10.10 176 240 1.3E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 SUPERFAMILY SSF75516 8 170 1.01E-35 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 1.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 1.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 1.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 SUPERFAMILY SSF46894 162 240 5.1E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 Gene3D G3DSA:3.30.450.80 1 175 6.9E-42 T 29-03-2018 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 5.7E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15090 45e3915c66a69f9e200bbbb8977da8ea 240 SMART SM00421 177 234 1.1E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS20705 b39bfa938221d3624fb3e59b2337251e 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 1.1E-18 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM460_RS20705 b39bfa938221d3624fb3e59b2337251e 105 SMART SM00992 3 102 3.3E-33 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM460_RS20705 b39bfa938221d3624fb3e59b2337251e 105 Gene3D G3DSA:2.30.30.390 1 105 2.9E-17 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM460_RS20705 b39bfa938221d3624fb3e59b2337251e 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 3.8E-35 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM460_RS20705 b39bfa938221d3624fb3e59b2337251e 105 SUPERFAMILY SSF141255 4 95 7.06E-30 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM460_RS20705 b39bfa938221d3624fb3e59b2337251e 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 37.369 T 29-03-2018 IPR022866 Heat shock protein HspQ AM460_RS04900 fa7632294f1f5792212773b834a44ccc 272 Gene3D G3DSA:3.40.190.10 33 129 2.9E-16 T 29-03-2018 AM460_RS04900 fa7632294f1f5792212773b834a44ccc 272 SUPERFAMILY SSF53850 34 272 8.15E-77 T 29-03-2018 AM460_RS04900 fa7632294f1f5792212773b834a44ccc 272 Pfam PF03180 NLPA lipoprotein 34 272 3.7E-93 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM460_RS04900 fa7632294f1f5792212773b834a44ccc 272 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 272 3.6E-149 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM460_RS04900 fa7632294f1f5792212773b834a44ccc 272 PIRSF PIRSF002854 1 272 4.8E-96 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM460_RS04900 fa7632294f1f5792212773b834a44ccc 272 Gene3D G3DSA:3.40.190.10 130 272 7.2E-47 T 29-03-2018 AM460_RS09305 ee31cf06d57de054e16dddc079d38ce5 359 Pfam PF01464 Transglycosylase SLT domain 196 319 1.3E-32 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS09305 ee31cf06d57de054e16dddc079d38ce5 359 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 358 66.899 T 29-03-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 AM460_RS09305 ee31cf06d57de054e16dddc079d38ce5 359 SUPERFAMILY SSF53955 191 357 1.24E-36 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS09305 ee31cf06d57de054e16dddc079d38ce5 359 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 213 241 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM460_RS09305 ee31cf06d57de054e16dddc079d38ce5 359 Gene3D G3DSA:1.10.530.10 180 357 8.7E-35 T 29-03-2018 AM460_RS09305 ee31cf06d57de054e16dddc079d38ce5 359 Pfam PF11873 Domain of unknown function (DUF3393) 3 191 4.4E-76 T 29-03-2018 IPR024570 Murein transglycosylase-C, N-terminal AM460_RS28115 8de67da643993b1c5bc1772f933b840c 875 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 38 276 1.0E-45 T 29-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM460_RS28115 8de67da643993b1c5bc1772f933b840c 875 Gene3D G3DSA:3.40.50.300 318 788 1.3E-17 T 29-03-2018 AM460_RS28115 8de67da643993b1c5bc1772f933b840c 875 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 43 853 1.0E-291 T 29-03-2018 IPR014117 Type-IV secretion system protein TraC AM460_RS28115 8de67da643993b1c5bc1772f933b840c 875 SUPERFAMILY SSF52540 439 762 1.01E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27590 dce162480212cd7795d020858cf36ca2 179 Pfam PF00436 Single-strand binding protein family 6 110 1.3E-38 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM460_RS27590 dce162480212cd7795d020858cf36ca2 179 SUPERFAMILY SSF50249 4 179 3.77E-56 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS27590 dce162480212cd7795d020858cf36ca2 179 Gene3D G3DSA:2.40.50.140 1 118 8.7E-43 T 29-03-2018 AM460_RS27590 dce162480212cd7795d020858cf36ca2 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 116 37.62 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS27590 dce162480212cd7795d020858cf36ca2 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 1.6E-55 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS27590 dce162480212cd7795d020858cf36ca2 179 PIRSF PIRSF002070 2 153 4.8E-37 T 29-03-2018 AM460_RS27590 dce162480212cd7795d020858cf36ca2 179 PIRSF PIRSF002070 140 175 860.0 T 29-03-2018 AM460_RS13425 d4897918f175b1f2ae85206babd6293b 396 Gene3D G3DSA:1.20.1250.20 208 396 4.0E-17 T 29-03-2018 AM460_RS13425 d4897918f175b1f2ae85206babd6293b 396 Gene3D G3DSA:1.20.1250.20 4 196 8.8E-37 T 29-03-2018 AM460_RS13425 d4897918f175b1f2ae85206babd6293b 396 SUPERFAMILY SSF103473 8 395 9.29E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS13425 d4897918f175b1f2ae85206babd6293b 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 390 5.8E-162 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM460_RS13425 d4897918f175b1f2ae85206babd6293b 396 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 4.0E-42 T 29-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 AM460_RS13425 d4897918f175b1f2ae85206babd6293b 396 Pfam PF07690 Major Facilitator Superfamily 16 358 1.1E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 Gene3D G3DSA:3.40.50.300 1 289 4.2E-40 T 29-03-2018 AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 2.5E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 2.5E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 2.5E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 2.5E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 SUPERFAMILY SSF52540 4 286 1.05E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS06630 9849c6af54015aaa176c988e5adad49b 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.6E-78 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AM460_RS15500 65a44ba834f47eea8d6d2cb512d0a1e9 474 Pfam PF00982 Glycosyltransferase family 20 17 452 5.5E-152 T 29-03-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 AM460_RS15500 65a44ba834f47eea8d6d2cb512d0a1e9 474 SUPERFAMILY SSF53756 2 455 6.8E-148 T 29-03-2018 AM460_RS15500 65a44ba834f47eea8d6d2cb512d0a1e9 474 Gene3D G3DSA:3.40.50.2000 1 236 4.5E-68 T 29-03-2018 AM460_RS15500 65a44ba834f47eea8d6d2cb512d0a1e9 474 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 8.1E-184 T 29-03-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 AM460_RS15500 65a44ba834f47eea8d6d2cb512d0a1e9 474 Gene3D G3DSA:3.40.50.2000 237 437 1.0E-39 T 29-03-2018 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 SUPERFAMILY SSF102114 52 316 8.76E-68 T 29-03-2018 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 9.6E-7 T 29-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 Gene3D G3DSA:3.20.20.70 28 304 2.2E-27 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.8E-164 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF04055 Radical SAM superfamily 91 251 1.2E-14 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.267 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 PIRSF PIRSF005963 2 321 4.0E-131 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM460_RS23245 723afa78dd8cb0f4392bbdc68d14adc4 321 SMART SM00729 84 293 1.9E-15 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 SUPERFAMILY SSF50814 15 176 9.98E-50 T 29-03-2018 IPR012674 Calycin AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 29-03-2018 IPR022272 Lipocalin family conserved site AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 Pfam PF08212 Lipocalin-like domain 35 174 2.5E-45 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PIRSF PIRSF036893 1 177 3.9E-52 T 29-03-2018 IPR022271 Lipocalin, ApoD type AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 Gene3D G3DSA:2.40.128.20 2 177 1.9E-46 T 29-03-2018 IPR012674 Calycin AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 2.6E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 2.6E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 2.6E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 2.6E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 2.6E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 2.6E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS02005 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 2.6E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS05040 2c13089ccc8ac8947d75994bef52960e 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 2.2E-72 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS05040 2c13089ccc8ac8947d75994bef52960e 213 SUPERFAMILY SSF53271 2 209 4.84E-51 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS05040 2c13089ccc8ac8947d75994bef52960e 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 1.3E-11 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM460_RS05040 2c13089ccc8ac8947d75994bef52960e 213 Gene3D G3DSA:3.40.50.2020 1 193 5.0E-49 T 29-03-2018 AM460_RS05040 2c13089ccc8ac8947d75994bef52960e 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 37.06 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 5.8E-26 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 Gene3D G3DSA:3.40.50.1000 1 164 3.9E-25 T 29-03-2018 IPR023214 HAD-like domain AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 Gene3D G3DSA:3.30.230.40 255 355 8.6E-32 T 29-03-2018 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 5.6E-46 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 8 134 4.9E-6 T 29-03-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.706 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 2.8E-83 T 29-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 SUPERFAMILY SSF56784 1 158 3.12E-40 T 29-03-2018 IPR023214 HAD-like domain AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 51.428 T 29-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 9.4E-65 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 Gene3D G3DSA:3.30.230.40 165 253 2.5E-34 T 29-03-2018 AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 SUPERFAMILY SSF54211 252 342 1.39E-32 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS14165 240bb09ba3a6ff192c52f83717238fbf 355 SUPERFAMILY SSF54211 167 251 1.07E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS05070 527e433349d66445e6c1224986f9ef24 55 SUPERFAMILY SSF57829 1 53 4.27E-20 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM460_RS05070 527e433349d66445e6c1224986f9ef24 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 29-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS05070 527e433349d66445e6c1224986f9ef24 55 Pfam PF00471 Ribosomal protein L33 7 53 8.8E-19 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS05070 527e433349d66445e6c1224986f9ef24 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.9E-28 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS05070 527e433349d66445e6c1224986f9ef24 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01385 607801e44d7f428c9557dab0bd92feb0 500 SUPERFAMILY SSF52540 13 369 4.6E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01385 607801e44d7f428c9557dab0bd92feb0 500 Gene3D G3DSA:3.40.50.300 13 443 2.9E-30 T 29-03-2018 AM460_RS01385 607801e44d7f428c9557dab0bd92feb0 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 7.9E-250 T 29-03-2018 IPR033186 Helicase HerA-like C-terminal AM460_RS12390 ffdb15eded2cbc4a89b6e9ece42b30e9 108 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 90 5.7E-27 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM460_RS12390 ffdb15eded2cbc4a89b6e9ece42b30e9 108 SUPERFAMILY SSF52794 4 101 1.2E-29 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS12390 ffdb15eded2cbc4a89b6e9ece42b30e9 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 98 2.1E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS12390 ffdb15eded2cbc4a89b6e9ece42b30e9 108 Gene3D G3DSA:3.40.50.2300 4 102 1.7E-36 T 29-03-2018 AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 Gene3D G3DSA:3.40.1360.10 78 171 5.6E-36 T 29-03-2018 AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 Pfam PF02132 RecR protein 41 77 2.1E-15 T 29-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 SUPERFAMILY SSF111304 2 199 7.98E-73 T 29-03-2018 IPR023627 Recombination protein RecR AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.67 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 SMART SM00493 81 166 2.1E-20 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 Gene3D G3DSA:1.10.150.20 5 38 0.4 T 29-03-2018 AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 3.9E-85 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 29-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AM460_RS23995 90556cceaea882a61285fd22312b2d34 201 Pfam PF13662 Toprim domain 82 172 2.4E-24 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 SMART SM00421 142 195 0.0012 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 19 195 3.0E-9 T 29-03-2018 AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 Gene3D G3DSA:1.10.10.10 82 196 1.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 187 1.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 1.2E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 1.2E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 1.2E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24950 37b132fd497a0ce7e2756540995eed44 196 SUPERFAMILY SSF46894 139 187 5.78E-12 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 Pfam PF00672 HAMP domain 217 263 2.7E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 SUPERFAMILY SSF47170 25 181 5.23E-52 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 SMART SM00319 44 182 3.0E-70 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 Gene3D G3DSA:1.10.287.1060 236 327 0.002 T 29-03-2018 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 Pfam PF02203 Tar ligand binding domain homologue 1 176 5.1E-58 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 2.5E-92 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.5E-92 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.5E-92 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.5E-92 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.5E-92 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.5E-92 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.5E-92 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 SMART SM00304 216 268 6.7E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 SUPERFAMILY SSF58104 236 522 9.42E-76 T 29-03-2018 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 29-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 SMART SM00283 269 516 4.9E-96 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 Gene3D G3DSA:1.20.120.30 23 190 1.2E-48 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 Gene3D G3DSA:1.10.287.950 328 520 1.1E-47 T 29-03-2018 AM460_RS00630 6f9afd2c815ccb4c6f5d65959881c93d 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 1.3E-60 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM460_RS19390 dbd96ae06c20d176e465415f8123eb06 97 Pfam PF05166 YcgL domain 3 75 1.7E-33 T 29-03-2018 IPR027354 YcgL domain AM460_RS19390 dbd96ae06c20d176e465415f8123eb06 97 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.677 T 29-03-2018 IPR027354 YcgL domain AM460_RS19390 dbd96ae06c20d176e465415f8123eb06 97 SUPERFAMILY SSF160191 1 95 4.97E-42 T 29-03-2018 AM460_RS19390 dbd96ae06c20d176e465415f8123eb06 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 4.0E-42 T 29-03-2018 IPR027354 YcgL domain AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 SUPERFAMILY SSF52096 7 299 4.83E-71 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 29-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Gene3D G3DSA:1.10.1040.10 613 710 4.6E-20 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Gene3D G3DSA:1.10.1040.10 491 591 5.0E-25 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Gene3D G3DSA:3.90.226.10 2 205 1.3E-60 T 29-03-2018 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 SUPERFAMILY SSF51735 308 489 8.82E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 8.6E-59 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 204 7.9E-44 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 SUPERFAMILY SSF48179 615 706 8.5E-25 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 53.848 T 29-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 2.1E-28 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 618 704 2.9E-5 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 SUPERFAMILY SSF48179 492 595 3.83E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS12635 64baba805cd02ac372aad52cb948ad8c 714 Gene3D G3DSA:3.40.50.720 252 490 5.7E-56 T 29-03-2018 AM460_RS16820 7ef72b0bab2aa4fe67742c1012ed305f 199 Gene3D G3DSA:1.10.10.60 7 60 1.2E-14 T 29-03-2018 AM460_RS16820 7ef72b0bab2aa4fe67742c1012ed305f 199 SUPERFAMILY SSF48498 81 194 2.36E-23 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS16820 7ef72b0bab2aa4fe67742c1012ed305f 199 SUPERFAMILY SSF46689 7 78 1.85E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS16820 7ef72b0bab2aa4fe67742c1012ed305f 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 189 2.4E-10 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS16820 7ef72b0bab2aa4fe67742c1012ed305f 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 2.4E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS16820 7ef72b0bab2aa4fe67742c1012ed305f 199 Gene3D G3DSA:1.10.357.10 61 195 1.6E-24 T 29-03-2018 AM460_RS14465 65c1023dd5dcbddfee0217ebbc1f8d51 398 Pfam PF01548 Transposase 14 168 4.3E-44 T 29-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM460_RS14465 65c1023dd5dcbddfee0217ebbc1f8d51 398 Gene3D G3DSA:1.10.340.30 178 295 0.026 T 29-03-2018 AM460_RS14465 65c1023dd5dcbddfee0217ebbc1f8d51 398 Pfam PF02371 Transposase IS116/IS110/IS902 family 277 358 1.7E-21 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM460_RS10430 b41f833f84940fa76bbc933032e6e449 445 SUPERFAMILY SSF103473 8 428 8.5E-68 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10430 b41f833f84940fa76bbc933032e6e449 445 Pfam PF00083 Sugar (and other) transporter 29 429 1.1E-50 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS10430 b41f833f84940fa76bbc933032e6e449 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS10430 b41f833f84940fa76bbc933032e6e449 445 Gene3D G3DSA:1.20.1250.20 13 212 8.3E-34 T 29-03-2018 AM460_RS10430 b41f833f84940fa76bbc933032e6e449 445 Gene3D G3DSA:1.20.1250.20 227 439 8.1E-27 T 29-03-2018 AM460_RS19675 947bc791c0b1e9548ee79e042dc4da71 533 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 30 510 1.1E-140 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AM460_RS19675 947bc791c0b1e9548ee79e042dc4da71 533 Pfam PF05136 Phage portal protein, lambda family 32 400 4.7E-94 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AM460_RS10785 fbec8eb342493b8b017f88eed7a0390a 166 Gene3D G3DSA:1.10.10.10 70 114 1.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10785 fbec8eb342493b8b017f88eed7a0390a 166 Gene3D G3DSA:1.10.10.10 116 166 3.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10785 fbec8eb342493b8b017f88eed7a0390a 166 Pfam PF02631 RecX family 50 162 1.5E-29 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AM460_RS10785 fbec8eb342493b8b017f88eed7a0390a 166 Hamap MF_01114 Regulatory protein RecX [recX]. 6 166 13.172 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AM460_RS10785 fbec8eb342493b8b017f88eed7a0390a 166 Gene3D G3DSA:1.10.10.10 12 69 5.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 Hamap MF_01060 Periplasmic trehalase [treA]. 3 534 83.609 T 29-03-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 ProSitePatterns PS00928 Trehalase signature 2. 446 455 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 191 209 2.9E-49 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 375 391 2.9E-49 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 266 283 2.9E-49 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 439 455 2.9E-49 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 516 529 2.9E-49 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 332 349 2.9E-49 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 300 317 2.9E-49 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 SUPERFAMILY SSF48208 39 539 7.37E-174 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 Pfam PF01204 Trehalase 55 532 1.4E-176 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 Gene3D G3DSA:1.50.10.10 31 537 1.2E-155 T 29-03-2018 AM460_RS19265 799c8ac0a77b1a67b0460d6f0d5e8cd5 565 ProSitePatterns PS00927 Trehalase signature 1. 149 162 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS18180 c292dea37b683ca08c15f59ea3641b8e 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 281 4.9E-15 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS18180 c292dea37b683ca08c15f59ea3641b8e 373 SUPERFAMILY SSF111369 45 288 9.29E-80 T 29-03-2018 AM460_RS18180 c292dea37b683ca08c15f59ea3641b8e 373 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 348 2.7E-7 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS18180 c292dea37b683ca08c15f59ea3641b8e 373 Gene3D G3DSA:1.20.1600.10 15 326 2.4E-29 T 29-03-2018 AM460_RS18180 c292dea37b683ca08c15f59ea3641b8e 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 363 2.4E-82 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS19690 77659c70c7c016e80a89b5d6a5aaa602 181 Pfam PF07471 Phage DNA packaging protein Nu1 1 164 2.5E-89 T 29-03-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit AM460_RS19690 77659c70c7c016e80a89b5d6a5aaa602 181 Gene3D G3DSA:1.10.10.10 2 63 1.2E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS19690 77659c70c7c016e80a89b5d6a5aaa602 181 SUPERFAMILY SSF46955 2 64 1.28E-15 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS19400 428476f76776efe280c6a6c7acde0733 133 Gene3D G3DSA:2.60.120.380 23 133 9.4E-18 T 29-03-2018 AM460_RS19400 428476f76776efe280c6a6c7acde0733 133 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 48 111 2.6E-7 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 Pfam PF00012 Hsp70 protein 7 80 8.0E-16 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 Pfam PF00012 Hsp70 protein 86 540 3.5E-98 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 176 186 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 353 372 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 297 313 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 34 46 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 436 452 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 117 137 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 PRINTS PR00301 70kDa heat shock protein signature 328 348 3.3E-35 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 SUPERFAMILY SSF53067 165 344 4.34E-40 T 29-03-2018 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 170 183 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 Gene3D G3DSA:3.30.420.40 5 174 2.4E-51 T 29-03-2018 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 SUPERFAMILY SSF53067 7 163 3.74E-46 T 29-03-2018 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 Gene3D G3DSA:2.60.34.10 334 538 2.2E-37 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 300 314 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 Gene3D G3DSA:3.30.420.40 175 329 2.3E-31 T 29-03-2018 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 SUPERFAMILY SSF100920 349 506 2.75E-31 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM460_RS23135 2f541821aa2c406e2e5488c3d23f6256 556 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 10 17 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS01955 6c175897455328a309878f577f3609d3 322 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.4E-59 T 29-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM460_RS01955 6c175897455328a309878f577f3609d3 322 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 1.1E-102 T 29-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM460_RS01955 6c175897455328a309878f577f3609d3 322 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.228 T 29-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 SUPERFAMILY SSF52425 3 198 3.92E-54 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 Pfam PF03441 FAD binding domain of DNA photolyase 272 466 9.0E-86 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 PRINTS PR00147 DNA photolyase signature 322 338 1.6E-32 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 PRINTS PR00147 DNA photolyase signature 381 395 1.6E-32 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 PRINTS PR00147 DNA photolyase signature 342 360 1.6E-32 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 PRINTS PR00147 DNA photolyase signature 143 159 1.6E-32 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 SUPERFAMILY SSF48173 192 470 2.22E-108 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 Gene3D G3DSA:1.10.579.10 290 470 1.7E-76 T 29-03-2018 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 Gene3D G3DSA:3.40.50.620 1 128 3.2E-32 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 Gene3D G3DSA:1.25.40.80 132 289 4.4E-39 T 29-03-2018 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 Pfam PF00875 DNA photolyase 5 168 2.6E-47 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM460_RS22840 3b50bd4c36c3cfdc7bb3758f3a5aac92 472 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 342 361 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:3.30.56.50 4 45 1.5E-9 T 29-03-2018 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:3.30.56.50 316 357 5.8E-10 T 29-03-2018 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 ProSitePatterns PS01176 Initiation factor 2 signature. 840 862 - T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Pfam PF00009 Elongation factor Tu GTP binding domain 394 550 2.2E-35 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Pfam PF11987 Translation-initiation factor 2 674 779 3.9E-36 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:3.40.50.300 373 562 1.6E-39 T 29-03-2018 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 393 548 1.7E-33 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:2.40.30.10 563 691 6.9E-30 T 29-03-2018 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF46955 3 50 9.89E-12 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 56 94 5.1E-16 T 29-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF52156 667 796 3.53E-37 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:2.40.30.10 790 888 2.2E-30 T 29-03-2018 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 889 6.1E-298 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 52 1.7E-7 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 7.2E-15 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF50447 563 644 7.9E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF52540 389 557 1.1E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 887 17.643 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF50447 791 887 3.73E-34 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS07615 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:3.40.50.10050 692 768 4.8E-25 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 SUPERFAMILY SSF53686 5 390 5.5E-142 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 Gene3D G3DSA:3.40.50.1100 9 194 1.2E-44 T 29-03-2018 AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 Gene3D G3DSA:3.40.50.1100 195 397 9.2E-37 T 29-03-2018 AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 9.0E-189 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.278 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 375 1.5E-49 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS18370 51c86a0c230d4dc1f80d073d74215a64 397 PIRSF PIRSF001413 1 397 1.7E-172 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 407 35.859 T 29-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.1E-10 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 1.1E-10 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 1.1E-10 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.1E-10 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 Gene3D G3DSA:1.10.3860.10 8 406 1.4E-73 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 SUPERFAMILY SSF118215 18 400 5.62E-95 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS08000 623c383d872c3d1a6fab8710721f66b7 414 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 5.3E-63 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Pfam PF00703 Glycosyl hydrolases family 2 209 318 7.8E-20 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 SUPERFAMILY SSF49785 1 205 2.41E-61 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 SUPERFAMILY SSF49303 209 318 1.21E-24 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 43 204 3.3E-47 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 370 395 - T 29-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 435 449 - T 29-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Gene3D G3DSA:2.60.120.260 1 206 4.2E-60 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Pfam PF16353 Domain of unknown function(DUF4981) 614 699 2.2E-16 T 29-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Gene3D G3DSA:3.20.20.80 319 599 4.3E-63 T 29-03-2018 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 SUPERFAMILY SSF51445 320 598 1.96E-83 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Gene3D G3DSA:2.60.40.10 600 707 1.4E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 320 604 4.7E-120 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 SUPERFAMILY SSF74650 714 1000 1.33E-84 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 SUPERFAMILY SSF49303 596 702 1.22E-23 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Gene3D G3DSA:2.60.40.10 208 318 9.1E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 SMART SM01038 727 998 2.9E-123 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Gene3D G3DSA:2.70.98.10 710 999 4.7E-83 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 378 1.2E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 329 343 1.2E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 435 450 1.2E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 1.2E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 506 521 1.2E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS08070 59cf7e3043112905bc718756f3dd0031 1030 Pfam PF02929 Beta galactosidase small chain 730 997 1.9E-64 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS19280 5caf8c18d9aca662b43ef3bbad4e0c13 326 Pfam PF01032 FecCD transport family 12 322 5.9E-89 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS19280 5caf8c18d9aca662b43ef3bbad4e0c13 326 SUPERFAMILY SSF81345 6 322 1.14E-78 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS19280 5caf8c18d9aca662b43ef3bbad4e0c13 326 Gene3D G3DSA:1.10.3470.10 1 326 7.1E-73 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 66 157 2.7E-8 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 SMART SM00922 163 269 1.3E-7 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 132 157 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 Gene3D G3DSA:3.30.390.10 1 159 9.6E-48 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 Pfam PF13378 Enolase C-terminal domain-like 183 392 1.9E-36 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 Hamap MF_01288 L-rhamnonate dehydratase [rhmD]. 1 401 79.574 T 29-03-2018 IPR023444 L-rhamnonate dehydratase GO:0050032 KEGG: 00051+4.2.1.90|MetaCyc: PWY-6713|MetaCyc: PWY-6714 AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 SUPERFAMILY SSF54826 41 158 2.65E-23 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 Gene3D G3DSA:3.20.20.120 160 390 2.5E-46 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS13090 0f4504e5800520406b9ff1c11c70153c 401 SUPERFAMILY SSF51604 145 397 4.06E-55 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 432 450 - T 29-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 Gene3D G3DSA:3.40.50.150 78 305 9.5E-60 T 29-03-2018 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 88 104 2.2E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 271 284 2.2E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 217 231 2.2E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 Gene3D G3DSA:3.90.120.10 306 438 9.9E-24 T 29-03-2018 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 169 181 - T 29-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 89 450 1.4E-105 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 Pfam PF00145 C-5 cytosine-specific DNA methylase 87 448 2.2E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS14835 e1ff9a20a14d88b6493d9de109ae6302 472 SUPERFAMILY SSF53335 87 450 4.71E-80 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 Gene3D G3DSA:3.40.50.970 143 495 1.4E-75 T 29-03-2018 AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 SMART SM00861 569 762 1.8E-50 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 Gene3D G3DSA:1.10.287.1150 59 141 4.6E-17 T 29-03-2018 AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 Pfam PF00676 Dehydrogenase E1 component 182 495 1.7E-49 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 908 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 SUPERFAMILY SSF52518 143 512 2.16E-76 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 PIRSF PIRSF000157 1 911 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 Pfam PF02779 Transketolase, pyrimidine binding domain 568 761 2.6E-60 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 767 909 1.0E-46 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 SUPERFAMILY SSF52518 552 768 8.93E-47 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS02685 65d4acf292a6397f3e59c513cb960149 914 Gene3D G3DSA:3.40.50.970 568 777 6.7E-53 T 29-03-2018 AM460_RS14015 4917bf6a6b31e9720741cb1871238b79 646 SUPERFAMILY SSF56112 83 227 1.05E-10 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS14015 4917bf6a6b31e9720741cb1871238b79 646 Gene3D G3DSA:1.10.510.10 104 338 2.8E-8 T 29-03-2018 AM460_RS14015 4917bf6a6b31e9720741cb1871238b79 646 Gene3D G3DSA:1.10.150.20 504 569 5.5E-4 T 29-03-2018 AM460_RS14015 4917bf6a6b31e9720741cb1871238b79 646 PIRSF PIRSF030823 1 646 0.0 T 29-03-2018 IPR016960 Uncharacterised conserved protein UCP030823, kinase, HhH DNA-binding AM460_RS20055 d6c840314700469aa3414736bc27c517 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 175 1.5E-13 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS20055 d6c840314700469aa3414736bc27c517 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 729 4.0E-177 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS20055 d6c840314700469aa3414736bc27c517 729 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS20055 d6c840314700469aa3414736bc27c517 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS20055 d6c840314700469aa3414736bc27c517 729 Gene3D G3DSA:2.170.130.10 35 184 2.5E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS20055 d6c840314700469aa3414736bc27c517 729 Gene3D G3DSA:2.40.170.20 187 729 5.2E-82 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS20055 d6c840314700469aa3414736bc27c517 729 SUPERFAMILY SSF56935 33 729 8.11E-120 T 29-03-2018 AM460_RS20055 d6c840314700469aa3414736bc27c517 729 Pfam PF00593 TonB dependent receptor 276 727 7.5E-51 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS21235 a4fab5d351aee0552d9ca4562446e1e0 415 Pfam PF03406 Phage tail fibre repeat 125 163 8.3E-18 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS21235 a4fab5d351aee0552d9ca4562446e1e0 415 Pfam PF03406 Phage tail fibre repeat 69 108 1.7E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS21235 a4fab5d351aee0552d9ca4562446e1e0 415 Pfam PF03406 Phage tail fibre repeat 181 219 2.8E-18 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS21235 a4fab5d351aee0552d9ca4562446e1e0 415 Pfam PF07484 Phage Tail Collar Domain 283 330 1.4E-14 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS21235 a4fab5d351aee0552d9ca4562446e1e0 415 Gene3D G3DSA:4.10.1070.10 326 394 4.8E-15 T 29-03-2018 AM460_RS21235 a4fab5d351aee0552d9ca4562446e1e0 415 SUPERFAMILY SSF88874 273 414 1.16E-36 T 29-03-2018 AM460_RS21235 a4fab5d351aee0552d9ca4562446e1e0 415 Gene3D G3DSA:3.90.1340.10 272 325 3.3E-20 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Gene3D G3DSA:1.20.120.430 67 269 3.0E-48 T 29-03-2018 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 1.2E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.4E-28 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Hamap MF_00195 GTPase Der [der]. 2 461 39.835 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 2.9E-26 T 29-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 203 368 3.3E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.1E-21 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 1.8E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Gene3D G3DSA:1.20.120.430 2 66 2.0E-15 T 29-03-2018 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Gene3D G3DSA:1.20.120.430 270 380 7.2E-15 T 29-03-2018 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 SUPERFAMILY SSF52540 137 167 1.3E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 SUPERFAMILY SSF52540 200 464 1.3E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.1E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 SUPERFAMILY SSF52540 4 168 1.33E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 PIRSF PIRSF006485 1 466 4.9E-180 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM460_RS11845 384f5ec37cecda22db4232f36c5c6e32 490 Gene3D G3DSA:3.30.300.20 381 459 1.1E-27 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF52029 185 376 3.14E-83 T 29-03-2018 IPR027409 GroEL-like apical domain AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 1 184 7.3E-44 T 29-03-2018 IPR027413 GroEL-like equatorial domain AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.3E-94 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:3.50.7.10 185 373 1.2E-97 T 29-03-2018 IPR027409 GroEL-like apical domain AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF54849 137 203 1.42E-24 T 29-03-2018 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.2E-257 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 406 521 5.88E-78 T 29-03-2018 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 7 134 5.88E-78 T 29-03-2018 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.614 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM460_RS02045 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 374 516 5.2E-24 T 29-03-2018 IPR027413 GroEL-like equatorial domain AM460_RS04995 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.859 T 29-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AM460_RS04995 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 Gene3D G3DSA:3.40.1280.10 1 189 2.4E-47 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS04995 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.1E-36 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM460_RS04995 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.5E-24 T 29-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AM460_RS04995 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 SUPERFAMILY SSF75217 4 174 7.85E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS08040 ec18aae6b6297caf8940883f573d230e 138 Gene3D G3DSA:1.10.260.40 80 138 1.9E-7 T 29-03-2018 AM460_RS08040 ec18aae6b6297caf8940883f573d230e 138 Pfam PF01381 Helix-turn-helix 84 135 4.5E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS08040 ec18aae6b6297caf8940883f573d230e 138 SUPERFAMILY SSF47413 83 137 2.96E-7 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS08040 ec18aae6b6297caf8940883f573d230e 138 SMART SM00530 83 136 2.1E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 SUPERFAMILY SSF47240 10 167 5.13E-50 T 29-03-2018 IPR009078 Ferritin-like superfamily AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.9E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.9E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.9E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 50.452 T 29-03-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 Gene3D G3DSA:1.20.1260.10 1 167 1.1E-39 T 29-03-2018 IPR012347 Ferritin-related AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 PIRSF PIRSF005900 8 167 2.9E-43 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM460_RS22255 36aa46c3c11c46dd41f216524ccbb299 167 Pfam PF00210 Ferritin-like domain 31 166 8.5E-22 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 52 1.0E-17 T 29-03-2018 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 29-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS08145 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS09500 118e3dc802b0a3613bbb1713e76d9e35 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 321 4.4E-177 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM460_RS09500 118e3dc802b0a3613bbb1713e76d9e35 321 Gene3D G3DSA:3.30.540.10 2 149 4.8E-49 T 29-03-2018 AM460_RS09500 118e3dc802b0a3613bbb1713e76d9e35 321 Gene3D G3DSA:3.30.540.10 151 321 3.2E-37 T 29-03-2018 AM460_RS09500 118e3dc802b0a3613bbb1713e76d9e35 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 4 321 6.7E-121 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM460_RS09500 118e3dc802b0a3613bbb1713e76d9e35 321 PIRSF PIRSF004532 1 321 1.1E-134 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM460_RS09500 118e3dc802b0a3613bbb1713e76d9e35 321 SUPERFAMILY SSF56655 2 321 5.74E-99 T 29-03-2018 AM460_RS15820 85f61b43464d10b131477f9a7c3b9a77 165 Gene3D G3DSA:3.30.450.40 2 155 2.0E-25 T 29-03-2018 IPR029016 GAF domain-like AM460_RS15820 85f61b43464d10b131477f9a7c3b9a77 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 90 107 - T 29-03-2018 IPR000614 Free Met sulfoxide reductase conserved site AM460_RS15820 85f61b43464d10b131477f9a7c3b9a77 165 SUPERFAMILY SSF55781 2 148 3.49E-42 T 29-03-2018 IPR029016 GAF domain-like AM460_RS15820 85f61b43464d10b131477f9a7c3b9a77 165 Pfam PF13185 GAF domain 34 151 1.5E-12 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS15820 85f61b43464d10b131477f9a7c3b9a77 165 SMART SM00065 9 161 1.4E-14 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 6.0E-40 T 29-03-2018 AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.443 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 SMART SM01387 8 88 1.8E-52 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 SUPERFAMILY SSF47060 3 89 1.71E-35 T 29-03-2018 IPR009068 S15/NS1, RNA-binding AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 5.7E-41 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 Gene3D G3DSA:1.10.287.10 2 89 9.8E-38 T 29-03-2018 AM460_RS07630 85d82584bc67014d3c63ee6ceabd5751 89 Pfam PF00312 Ribosomal protein S15 9 88 2.3E-38 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 SUPERFAMILY SSF56327 173 443 5.56E-79 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 SUPERFAMILY SSF51735 4 167 3.63E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 2.0E-77 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 2.1E-35 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 Gene3D G3DSA:3.40.50.720 2 169 1.4E-27 T 29-03-2018 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.5E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 6.5E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.5E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 6.5E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 6.5E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 6.5E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 6.5E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM460_RS16345 36a2ae9370e6c06bec76878b721b97a7 450 Gene3D G3DSA:3.90.110.10 171 449 3.9E-69 T 29-03-2018 AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 Pfam PF00005 ABC transporter 328 459 2.6E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 Pfam PF00005 ABC transporter 17 178 2.1E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 Pfam PF12848 ABC transporter 217 298 1.0E-28 T 29-03-2018 IPR032781 ABC-transporter extension domain AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 Gene3D G3DSA:3.40.50.300 308 563 1.1E-49 T 29-03-2018 AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 Gene3D G3DSA:3.40.50.300 2 279 1.2E-53 T 29-03-2018 AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 SUPERFAMILY SSF52540 119 253 3.66E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 SUPERFAMILY SSF52540 2 92 3.66E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 SMART SM00382 337 506 2.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 SMART SM00382 26 223 2.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 SUPERFAMILY SSF52540 295 516 5.68E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06645 6c7a8aa4c36cda06680cd2a606c4b746 637 Gene3D G3DSA:1.10.287.380 564 618 8.3E-4 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM460_RS08025 30e6d53e65387ac107055d0594e7fb02 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS08025 30e6d53e65387ac107055d0594e7fb02 378 PIRSF PIRSF037565 1 374 5.4E-166 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS08025 30e6d53e65387ac107055d0594e7fb02 378 Gene3D G3DSA:3.40.50.150 183 378 6.8E-36 T 29-03-2018 AM460_RS08025 30e6d53e65387ac107055d0594e7fb02 378 SUPERFAMILY SSF53335 192 373 7.17E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS08025 30e6d53e65387ac107055d0594e7fb02 378 Pfam PF05175 Methyltransferase small domain 199 370 1.0E-58 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM460_RS08025 30e6d53e65387ac107055d0594e7fb02 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 373 50.478 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS26160 7410ba7e2190b8f71105613cf05b7b18 94 Gene3D G3DSA:2.30.30.110 2 94 2.2E-17 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS26160 7410ba7e2190b8f71105613cf05b7b18 94 SUPERFAMILY SSF50118 1 93 7.19E-22 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS26160 7410ba7e2190b8f71105613cf05b7b18 94 Pfam PF01845 CcdB protein 2 93 3.2E-26 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM460_RS26160 7410ba7e2190b8f71105613cf05b7b18 94 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 11 94 1.0E-42 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM460_RS00080 0ad53589a6f40bad5cc32bd22757dd37 98 Pfam PF10697 Protein of unknown function (DUF2502) 25 82 3.0E-15 T 29-03-2018 IPR019638 Protein of unknown function DUF2502 AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Gene3D G3DSA:3.30.390.10 6 97 8.5E-30 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 2.1E-53 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Gene3D G3DSA:3.20.20.120 98 353 6.9E-67 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 SUPERFAMILY SSF54826 1 112 1.13E-32 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 SUPERFAMILY SSF51604 95 359 4.85E-72 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 9.4E-31 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.53 T 29-03-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 AM460_RS04745 2c4bc2a637e0f55c1b8382b99ba2a64b 382 SMART SM00922 125 230 1.0E-17 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 Gene3D G3DSA:1.10.1040.10 212 287 5.2E-28 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 5.7E-103 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.5E-27 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 SUPERFAMILY SSF48179 191 287 1.29E-30 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 Gene3D G3DSA:1.20.5.100 194 211 4.9E-14 T 29-03-2018 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 Gene3D G3DSA:3.40.50.720 288 388 2.2E-16 T 29-03-2018 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 SMART SM00984 300 387 2.2E-13 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 SUPERFAMILY SSF51735 1 194 1.29E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 PIRSF PIRSF000124 1 388 5.5E-143 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 SUPERFAMILY SSF52413 283 387 8.37E-28 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 Gene3D G3DSA:3.40.50.720 1 193 2.7E-50 T 29-03-2018 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 PIRSF PIRSF500134 1 343 2.2E-120 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 PIRSF PIRSF500134 338 388 0.0042 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 3.1E-32 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS14135 9cf4cb5850e2e7636579d384d104e98e 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 7.9E-8 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 SUPERFAMILY SSF50249 138 235 1.03E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Pfam PF00575 S1 RNA binding domain 641 724 2.2E-20 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 SMART SM00316 642 725 5.2E-17 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 6.5E-293 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Pfam PF08206 Ribonuclease B OB domain 87 144 4.3E-22 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Pfam PF08206 Ribonuclease B OB domain 158 213 8.7E-5 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 3.5E-13 T 29-03-2018 IPR013668 Ribonuclease R winged-helix domain AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 SUPERFAMILY SSF50249 221 641 4.68E-144 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 4.7E-290 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Pfam PF00773 RNB domain 260 587 2.9E-111 T 29-03-2018 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Gene3D G3DSA:1.10.10.10 15 75 1.6E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Gene3D G3DSA:2.40.50.140 76 207 0.36 T 29-03-2018 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 SMART SM00955 260 588 4.9E-187 T 29-03-2018 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 SUPERFAMILY SSF50249 67 145 8.01E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 SUPERFAMILY SSF50249 644 724 1.5E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Gene3D G3DSA:2.40.50.140 641 726 2.6E-21 T 29-03-2018 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 58.134 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM460_RS01855 1cf6b260bd08cf66b2c42ae027095362 813 SMART SM00357 86 145 2.1E-16 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS10415 688d5b0a2b504c25f84f64005f1aaa07 425 SUPERFAMILY SSF103473 5 413 1.57E-39 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10415 688d5b0a2b504c25f84f64005f1aaa07 425 Pfam PF07690 Major Facilitator Superfamily 26 359 1.5E-22 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS10415 688d5b0a2b504c25f84f64005f1aaa07 425 Gene3D G3DSA:1.20.1250.20 211 419 2.6E-12 T 29-03-2018 AM460_RS10415 688d5b0a2b504c25f84f64005f1aaa07 425 Gene3D G3DSA:1.20.1250.20 4 209 1.2E-22 T 29-03-2018 AM460_RS28090 0a6a6aa87e3ce9962f2b80d65438c45a 216 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 97 209 4.5E-37 T 29-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup AM460_RS28090 0a6a6aa87e3ce9962f2b80d65438c45a 216 Gene3D G3DSA:3.40.30.10 35 196 5.0E-4 T 29-03-2018 AM460_RS28090 0a6a6aa87e3ce9962f2b80d65438c45a 216 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 98 175 9.0E-20 T 29-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AM460_RS06230 6deebede2d14ede69959fe739f433218 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 366 5.0E-227 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 PIRSF PIRSF000148 1 367 1.1E-71 T 29-03-2018 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 34.33 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 SUPERFAMILY SSF51735 1 147 1.06E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS06230 6deebede2d14ede69959fe739f433218 367 Gene3D G3DSA:3.30.360.10 144 350 1.5E-60 T 29-03-2018 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 SUPERFAMILY SSF55347 134 354 8.93E-79 T 29-03-2018 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 3.5E-24 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 Gene3D G3DSA:3.40.50.720 1 143 5.6E-19 T 29-03-2018 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 SMART SM00859 3 122 2.2E-24 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS06230 6deebede2d14ede69959fe739f433218 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 7.0E-61 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 SUPERFAMILY SSF55326 3 156 1.24E-32 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 SUPERFAMILY SSF56042 163 331 2.99E-39 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 Gene3D G3DSA:3.30.1330.10 1 156 3.9E-23 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 152 1.3E-15 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 Gene3D G3DSA:3.90.650.10 161 324 1.5E-33 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 PIRSF PIRSF005644 1 336 2.2E-123 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 336 5.9E-141 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE AM460_RS10620 41679ded0754c7f772d1ce36852b99c3 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 313 1.6E-25 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS15085 e58d9956dae3bb0957216e5a69975f71 250 Pfam PF00005 ABC transporter 19 173 3.4E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS15085 e58d9956dae3bb0957216e5a69975f71 250 SMART SM00382 28 221 3.2E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS15085 e58d9956dae3bb0957216e5a69975f71 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS15085 e58d9956dae3bb0957216e5a69975f71 250 Gene3D G3DSA:3.40.50.300 1 248 7.4E-79 T 29-03-2018 AM460_RS15085 e58d9956dae3bb0957216e5a69975f71 250 SUPERFAMILY SSF52540 4 243 2.35E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS15085 e58d9956dae3bb0957216e5a69975f71 250 PIRSF PIRSF039085 1 249 9.8E-112 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM460_RS25450 2a381e1e09c703d61823ce7f7d5643e3 241 Pfam PF00696 Amino acid kinase family 10 219 4.0E-28 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS25450 2a381e1e09c703d61823ce7f7d5643e3 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 7.3E-104 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM460_RS25450 2a381e1e09c703d61823ce7f7d5643e3 241 SUPERFAMILY SSF53633 7 240 3.93E-72 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS25450 2a381e1e09c703d61823ce7f7d5643e3 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.437 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM460_RS25450 2a381e1e09c703d61823ce7f7d5643e3 241 Gene3D G3DSA:3.40.1160.10 2 241 6.9E-44 T 29-03-2018 AM460_RS25450 2a381e1e09c703d61823ce7f7d5643e3 241 PIRSF PIRSF005650 4 241 8.0E-90 T 29-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AM460_RS22295 25cafef8865201de4409cc87732d74ce 760 SUPERFAMILY SSF56935 31 760 8.11E-123 T 29-03-2018 AM460_RS22295 25cafef8865201de4409cc87732d74ce 760 Gene3D G3DSA:2.40.170.20 182 760 3.3E-86 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS22295 25cafef8865201de4409cc87732d74ce 760 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS22295 25cafef8865201de4409cc87732d74ce 760 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 760 2.6E-78 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS22295 25cafef8865201de4409cc87732d74ce 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 168 2.5E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS22295 25cafef8865201de4409cc87732d74ce 760 Gene3D G3DSA:2.170.130.10 32 176 1.9E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS22295 25cafef8865201de4409cc87732d74ce 760 Pfam PF00593 TonB dependent receptor 256 758 6.8E-53 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 2.5E-26 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 SUPERFAMILY SSF53623 105 338 8.77E-80 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 Gene3D G3DSA:3.40.1390.10 2 104 1.1E-23 T 29-03-2018 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 35.031 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 Gene3D G3DSA:3.90.190.20 343 494 2.9E-49 T 29-03-2018 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 SUPERFAMILY SSF53244 339 491 6.41E-52 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 2.1E-165 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 SUPERFAMILY SSF63418 5 103 1.7E-22 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 Pfam PF08245 Mur ligase middle domain 114 318 1.1E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 7.2E-12 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM460_RS25955 9d78a2e69d0d123728d064d9fbb833f7 495 Gene3D G3DSA:3.40.1190.10 105 342 1.1E-53 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS12010 80a9dd33d587548bf4184d4111abf754 66 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 2.6E-34 T 29-03-2018 IPR020910 Uncharacterised protein family UPF0370 AM460_RS12010 80a9dd33d587548bf4184d4111abf754 66 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 27.722 T 29-03-2018 IPR020910 Uncharacterised protein family UPF0370 AM460_RS01610 6368f0cdf1a01dc384e1c2397a7d71e6 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 5.0E-30 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 AM460_RS01610 6368f0cdf1a01dc384e1c2397a7d71e6 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.2E-29 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 AM460_RS01610 6368f0cdf1a01dc384e1c2397a7d71e6 68 Gene3D G3DSA:3.30.1910.10 1 62 3.9E-31 T 29-03-2018 AM460_RS20345 564233cc09f9d1c7cf9967ffcf8472f6 177 Gene3D G3DSA:3.40.220.10 1 177 9.5E-71 T 29-03-2018 AM460_RS20345 564233cc09f9d1c7cf9967ffcf8472f6 177 Pfam PF01661 Macro domain 21 137 1.2E-41 T 29-03-2018 IPR002589 Macro domain AM460_RS20345 564233cc09f9d1c7cf9967ffcf8472f6 177 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 48.2 T 29-03-2018 IPR024900 O-acetyl-ADP-ribose deacetylase AM460_RS20345 564233cc09f9d1c7cf9967ffcf8472f6 177 SMART SM00506 4 137 3.5E-58 T 29-03-2018 IPR002589 Macro domain AM460_RS20345 564233cc09f9d1c7cf9967ffcf8472f6 177 SUPERFAMILY SSF52949 3 172 3.7E-64 T 29-03-2018 AM460_RS26955 04c5d97590c526fbfc88bdf79fbf6a83 333 Pfam PF14022 Protein of unknown function (DUF4238) 13 309 2.2E-37 T 29-03-2018 IPR025332 Protein of unknown function DUF4238 AM460_RS00665 e863d3ecce843e05cc29556239d34445 388 Gene3D G3DSA:1.10.10.10 127 238 1.1E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00665 e863d3ecce843e05cc29556239d34445 388 Gene3D G3DSA:3.40.1350.10 239 368 2.7E-21 T 29-03-2018 AM460_RS00665 e863d3ecce843e05cc29556239d34445 388 Pfam PF04471 Restriction endonuclease 243 359 1.7E-29 T 29-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AM460_RS00665 e863d3ecce843e05cc29556239d34445 388 SUPERFAMILY SSF52980 247 362 5.36E-14 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 SUPERFAMILY SSF100950 76 234 1.47E-30 T 29-03-2018 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 Pfam PF00455 DeoR C terminal sensor domain 77 233 2.3E-48 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.8E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.8E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.7E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 Gene3D G3DSA:1.10.10.10 1 59 5.4E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 SMART SM01134 74 234 7.2E-58 T 29-03-2018 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 Gene3D G3DSA:3.40.50.1360 66 233 8.5E-34 T 29-03-2018 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 SMART SM00420 6 58 1.9E-25 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS16145 0b50e5077e47d8a3743a756e261bfb99 252 SUPERFAMILY SSF46785 4 71 1.78E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25685 9f1522028e54ff7517988e8ad6b5bf6d 409 SUPERFAMILY SSF88713 191 376 5.0E-29 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS25685 9f1522028e54ff7517988e8ad6b5bf6d 409 Gene3D G3DSA:3.20.20.370 174 405 3.0E-38 T 29-03-2018 AM460_RS25685 9f1522028e54ff7517988e8ad6b5bf6d 409 Pfam PF01522 Polysaccharide deacetylase 228 366 2.5E-21 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM460_RS20510 f32afda8bbffe3f14c1dd9b290121171 128 Pfam PF01042 Endoribonuclease L-PSP 13 125 1.5E-32 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM460_RS20510 f32afda8bbffe3f14c1dd9b290121171 128 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.2E-75 T 29-03-2018 IPR019898 Putative aminoacrylate peracid reductase RutC AM460_RS20510 f32afda8bbffe3f14c1dd9b290121171 128 SUPERFAMILY SSF55298 3 126 3.93E-34 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS20510 f32afda8bbffe3f14c1dd9b290121171 128 Gene3D G3DSA:3.30.1330.40 3 128 8.5E-32 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS20510 f32afda8bbffe3f14c1dd9b290121171 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 29-03-2018 IPR019897 RidA, conserved site AM460_RS20510 f32afda8bbffe3f14c1dd9b290121171 128 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 44.886 T 29-03-2018 IPR019898 Putative aminoacrylate peracid reductase RutC AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 32.097 T 29-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.0E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.0E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 SUPERFAMILY SSF143800 1 66 1.02E-27 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 Pfam PF01197 Ribosomal protein L31 1 65 7.5E-31 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS03395 091bb03c9d1e8734ac0da1ad6ed169e2 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 6.9E-35 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 196 0.0087 T 29-03-2018 AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 Pfam PF00106 short chain dehydrogenase 10 205 3.8E-57 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 SUPERFAMILY SSF51735 8 266 1.19E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.3E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 7.3E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.3E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 7.3E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.3E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.3E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.8E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.8E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.8E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS02895 c4a4793ac7e1c453c9c6228e04376fc7 268 Gene3D G3DSA:3.40.50.720 4 264 1.3E-61 T 29-03-2018 AM460_RS14895 ad19a7639463b8497f82a7cafc7e6d6c 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 4.1E-35 T 29-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AM460_RS14895 ad19a7639463b8497f82a7cafc7e6d6c 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.4E-30 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS14895 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.9E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS14895 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.9E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS14895 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.9E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS14895 ad19a7639463b8497f82a7cafc7e6d6c 89 PIRSF PIRSF004669 1 89 7.5E-34 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS20180 bcaf5dbfd8a146e89fdf1689062ba98a 251 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-10 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM460_RS20180 bcaf5dbfd8a146e89fdf1689062ba98a 251 SUPERFAMILY SSF117143 77 209 3.14E-17 T 29-03-2018 AM460_RS20180 bcaf5dbfd8a146e89fdf1689062ba98a 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 2.0E-20 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM460_RS20180 bcaf5dbfd8a146e89fdf1689062ba98a 251 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM460_RS20180 bcaf5dbfd8a146e89fdf1689062ba98a 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.5E-32 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM460_RS28000 af43d3f07ccfa02d4d3d0207bbc8f030 738 Pfam PF12615 F sex factor protein N terminal 31 128 7.8E-29 T 29-03-2018 IPR022585 TraD coupling protein, N-terminal AM460_RS28000 af43d3f07ccfa02d4d3d0207bbc8f030 738 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 1.9E-121 T 29-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AM460_RS28000 af43d3f07ccfa02d4d3d0207bbc8f030 738 SUPERFAMILY SSF52540 163 572 7.99E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS28000 af43d3f07ccfa02d4d3d0207bbc8f030 738 Gene3D G3DSA:3.40.50.300 132 574 7.7E-42 T 29-03-2018 AM460_RS28000 af43d3f07ccfa02d4d3d0207bbc8f030 738 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 577 1.6E-251 T 29-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 AM460_RS27420 af43d3f07ccfa02d4d3d0207bbc8f030 738 Pfam PF12615 F sex factor protein N terminal 31 128 7.8E-29 T 29-03-2018 IPR022585 TraD coupling protein, N-terminal AM460_RS27420 af43d3f07ccfa02d4d3d0207bbc8f030 738 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 1.9E-121 T 29-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AM460_RS27420 af43d3f07ccfa02d4d3d0207bbc8f030 738 SUPERFAMILY SSF52540 163 572 7.99E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27420 af43d3f07ccfa02d4d3d0207bbc8f030 738 Gene3D G3DSA:3.40.50.300 132 574 7.7E-42 T 29-03-2018 AM460_RS27420 af43d3f07ccfa02d4d3d0207bbc8f030 738 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 577 1.6E-251 T 29-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 AM460_RS05225 d55a28869a5627ad8c61bdb1cebfa635 396 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.486 T 29-03-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AM460_RS05225 d55a28869a5627ad8c61bdb1cebfa635 396 PIRSF PIRSF000138 2 379 2.7E-120 T 29-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AM460_RS05225 d55a28869a5627ad8c61bdb1cebfa635 396 Gene3D G3DSA:3.20.20.70 2 378 2.6E-96 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS05225 d55a28869a5627ad8c61bdb1cebfa635 396 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.4E-124 T 29-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AM460_RS05225 d55a28869a5627ad8c61bdb1cebfa635 396 SUPERFAMILY SSF51395 6 375 2.14E-99 T 29-03-2018 AM460_RS05225 d55a28869a5627ad8c61bdb1cebfa635 396 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 29-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AM460_RS07925 a6784213cd17fa79c58dda7d61e626b3 298 SUPERFAMILY SSF46785 8 91 1.69E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07925 a6784213cd17fa79c58dda7d61e626b3 298 Pfam PF03466 LysR substrate binding domain 96 280 2.3E-18 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS07925 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:1.10.10.10 2 89 1.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07925 a6784213cd17fa79c58dda7d61e626b3 298 SUPERFAMILY SSF53850 93 288 1.38E-23 T 29-03-2018 AM460_RS07925 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:3.40.190.10 94 183 4.7E-7 T 29-03-2018 AM460_RS07925 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:3.40.190.10 184 268 6.4E-11 T 29-03-2018 AM460_RS07925 a6784213cd17fa79c58dda7d61e626b3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS18315 d8b0ea633cbe8c7d54c8aabc3e0b2b56 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 7.9E-61 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM460_RS18315 d8b0ea633cbe8c7d54c8aabc3e0b2b56 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 7.0E-85 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM460_RS18315 d8b0ea633cbe8c7d54c8aabc3e0b2b56 196 Gene3D G3DSA:3.40.50.300 6 196 6.5E-73 T 29-03-2018 AM460_RS18315 d8b0ea633cbe8c7d54c8aabc3e0b2b56 196 SUPERFAMILY SSF52540 7 196 1.78E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18315 d8b0ea633cbe8c7d54c8aabc3e0b2b56 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 2.4E-6 T 29-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM460_RS18315 d8b0ea633cbe8c7d54c8aabc3e0b2b56 196 PIRSF PIRSF015617 1 196 4.2E-70 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 728 1031 3.7E-68 T 29-03-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 837 872 7.0E-7 T 29-03-2018 AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 Gene3D G3DSA:3.40.50.300 266 452 2.6E-21 T 29-03-2018 AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 SMART SM00487 268 478 2.1E-14 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 39 725 5.1E-230 T 29-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 SUPERFAMILY SSF52540 229 440 6.98E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 Pfam PF04851 Type III restriction enzyme, res subunit 271 439 1.2E-36 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM460_RS27745 18a413d689eedb25da31654e5c1090e0 1038 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 30 219 3.1E-52 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 29-03-2018 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:3.30.1360.10 119 231 2.8E-28 T 29-03-2018 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:3.30.1360.10 4 90 3.1E-19 T 29-03-2018 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 SMART SM00662 23 234 3.0E-105 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.651 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF56553 53 178 1.45E-41 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 29-03-2018 AM460_RS06945 456bfd9236c5cfd90803aed14a8ec2d0 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 4.3E-113 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 SUPERFAMILY SSF46785 3 87 4.75E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 Pfam PF03466 LysR substrate binding domain 91 292 9.5E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 SUPERFAMILY SSF53850 93 295 1.4E-41 T 29-03-2018 AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 Gene3D G3DSA:3.40.190.10 92 177 1.4E-15 T 29-03-2018 AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 Gene3D G3DSA:1.10.10.10 4 91 3.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10230 70aac3f12269ec71b1c2d840c87da85c 305 Gene3D G3DSA:3.40.190.10 178 263 1.4E-23 T 29-03-2018 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Gene3D G3DSA:3.20.20.330 2 337 2.1E-112 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Gene3D G3DSA:3.10.196.10 1080 1227 4.1E-65 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Gene3D G3DSA:3.10.196.10 956 1079 1.3E-45 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 SUPERFAMILY SSF52242 743 894 2.35E-48 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Gene3D G3DSA:3.20.20.20 345 644 1.6E-74 T 29-03-2018 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Gene3D G3DSA:3.40.50.280 732 903 1.1E-55 T 29-03-2018 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 SUPERFAMILY SSF56507 902 1226 1.02E-135 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 2.5E-80 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 SUPERFAMILY SSF47644 652 739 4.05E-29 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 SMART SM01018 657 740 5.0E-45 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Pfam PF00809 Pterin binding enzyme 360 598 6.0E-62 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Pfam PF02310 B12 binding domain 748 840 3.7E-18 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 SUPERFAMILY SSF51717 356 630 4.71E-88 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Gene3D G3DSA:1.10.1240.10 652 731 7.0E-38 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 PIRSF PIRSF000381 1 1195 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Pfam PF02607 B12 binding domain 660 733 3.1E-25 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 1.6E-127 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS02945 a8dd67e2e2c020296b209867fb0fe126 1227 SUPERFAMILY SSF82282 8 399 2.49E-119 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM460_RS19415 5527a023a66e2cb7183f5d718237c1ed 231 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 2.2E-40 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AM460_RS19415 5527a023a66e2cb7183f5d718237c1ed 231 SUPERFAMILY SSF63848 125 230 3.53E-29 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM460_RS19415 5527a023a66e2cb7183f5d718237c1ed 231 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 230 3.9E-71 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM460_RS19415 5527a023a66e2cb7183f5d718237c1ed 231 Gene3D G3DSA:2.160.20.70 110 231 2.5E-29 T 29-03-2018 AM460_RS19415 5527a023a66e2cb7183f5d718237c1ed 231 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 128 227 7.1E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM460_RS19415 5527a023a66e2cb7183f5d718237c1ed 231 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 231 29.126 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM460_RS17535 a285af6fd5e27f2a2aedd54a313aab56 293 SUPERFAMILY SSF103481 191 291 1.57E-7 T 29-03-2018 AM460_RS17535 a285af6fd5e27f2a2aedd54a313aab56 293 SUPERFAMILY SSF103481 48 140 7.85E-6 T 29-03-2018 AM460_RS17535 a285af6fd5e27f2a2aedd54a313aab56 293 Pfam PF00892 EamA-like transporter family 6 137 1.2E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS17535 a285af6fd5e27f2a2aedd54a313aab56 293 Pfam PF00892 EamA-like transporter family 158 285 5.4E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS08835 9623659a47cc75ead606da837216c523 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 5.4E-48 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 AM460_RS08835 9623659a47cc75ead606da837216c523 122 SUPERFAMILY SSF143737 8 118 5.89E-51 T 29-03-2018 AM460_RS08835 9623659a47cc75ead606da837216c523 122 Gene3D G3DSA:3.30.450.20 27 119 1.0E-49 T 29-03-2018 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01383 42 118 1.9E-48 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50249 3 125 5.14E-50 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 3.6E-132 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01382 124 251 7.5E-90 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.144 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:4.10.950.10 197 272 3.3E-35 T 29-03-2018 IPR014726 Ribosomal protein L2, domain 3 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.9E-34 T 29-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 29-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50104 126 269 1.44E-59 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.30.30.30 119 195 1.3E-31 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 PIRSF PIRSF002158 12 273 4.0E-101 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 9.7E-56 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM460_RS06835 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.40.50.140 1 114 3.6E-48 T 29-03-2018 AM460_RS11725 107dc9ab2091a48212aca790095f00e4 284 Pfam PF12146 Serine aminopeptidase, S33 77 187 3.0E-13 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM460_RS11725 107dc9ab2091a48212aca790095f00e4 284 SUPERFAMILY SSF53474 21 280 3.69E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS11725 107dc9ab2091a48212aca790095f00e4 284 Gene3D G3DSA:3.40.50.1820 35 280 2.1E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS05145 d33fc04db5db29f9e910e2697f4701cb 319 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 317 1.3E-130 T 29-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 AM460_RS05145 d33fc04db5db29f9e910e2697f4701cb 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 315 4.4E-81 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM460_RS05145 d33fc04db5db29f9e910e2697f4701cb 319 SUPERFAMILY SSF53756 1 318 7.69E-74 T 29-03-2018 AM460_RS05145 d33fc04db5db29f9e910e2697f4701cb 319 Gene3D G3DSA:3.40.50.2000 164 319 2.2E-34 T 29-03-2018 AM460_RS05145 d33fc04db5db29f9e910e2697f4701cb 319 Gene3D G3DSA:3.40.50.2000 1 163 3.6E-41 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:3.30.230.10 585 772 6.1E-70 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 7.1E-57 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 7.1E-57 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 7.1E-57 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 7.1E-57 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 7.1E-57 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 29-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:1.10.4060.10 121 211 1.8E-31 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PIRSF PIRSF001174 1 775 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:2.30.130.40 1 118 3.3E-31 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SUPERFAMILY SSF88697 10 201 4.22E-52 T 29-03-2018 IPR015947 PUA-like domain AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SUPERFAMILY SSF52540 313 587 5.4E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:1.10.8.60 491 584 8.0E-33 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SMART SM00382 348 492 4.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SUPERFAMILY SSF54211 595 771 1.1E-59 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:3.40.50.300 313 490 4.8E-30 T 29-03-2018 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.577 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.5E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 9.2E-43 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.1E-97 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM460_RS24170 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SMART SM00464 10 202 3.9E-88 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM460_RS20550 01f51658daa54b6fce36cc556c007d30 75 Pfam PF13993 YccJ-like protein 9 75 1.8E-38 T 29-03-2018 IPR025600 YccJ-like protein AM460_RS07550 6430a14f5b78b1e75288bbc6f448e0c5 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-44 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM460_RS07550 6430a14f5b78b1e75288bbc6f448e0c5 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.6E-44 T 29-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AM460_RS07550 6430a14f5b78b1e75288bbc6f448e0c5 97 SMART SM01103 3 86 4.3E-40 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM460_RS07550 6430a14f5b78b1e75288bbc6f448e0c5 97 Gene3D G3DSA:3.30.110.60 2 97 1.3E-28 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM460_RS07550 6430a14f5b78b1e75288bbc6f448e0c5 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.7E-22 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM460_RS07550 6430a14f5b78b1e75288bbc6f448e0c5 97 SUPERFAMILY SSF75471 1 95 5.89E-31 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM460_RS26470 5c777307dfb86aefe449f2c0b054c5c6 431 Pfam PF06864 Pilin accessory protein (PilO) 22 429 1.6E-71 T 29-03-2018 IPR009663 Pilin accessory predicted AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 213 552 8.5E-151 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 SUPERFAMILY SSF52794 105 206 3.84E-35 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 107 190 7.1E-40 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 108 194 1.4E-18 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 SUPERFAMILY SSF52794 4 88 1.18E-9 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 Gene3D G3DSA:3.40.50.2300 35 84 0.2 T 29-03-2018 AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 Gene3D G3DSA:3.40.50.2300 105 202 6.2E-37 T 29-03-2018 AM460_RS13510 85ff8e6e1303d0fc63511e100f9bf19a 563 Pfam PF02378 Phosphotransferase system, EIIC 233 496 9.6E-19 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 SUPERFAMILY SSF53850 89 270 3.98E-15 T 29-03-2018 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 Gene3D G3DSA:3.40.190.10 83 230 4.9E-10 T 29-03-2018 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 SUPERFAMILY SSF46785 2 85 1.67E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 275 49.51 T 29-03-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 Gene3D G3DSA:1.10.10.10 1 82 1.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04380 1484697fcd40280fab89483d3aa85aa8 279 Pfam PF03466 LysR substrate binding domain 87 270 3.3E-13 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 SUPERFAMILY SSF50692 688 828 1.06E-41 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 SMART SM00926 39 93 4.0E-14 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 SUPERFAMILY SSF53706 37 700 1.57E-204 T 29-03-2018 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Gene3D G3DSA:3.40.50.740 99 269 3.9E-37 T 29-03-2018 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 1.3E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.8E-24 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 30.881 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Gene3D G3DSA:3.40.50.740 304 668 3.4E-66 T 29-03-2018 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Gene3D G3DSA:2.40.40.20 669 828 4.7E-36 T 29-03-2018 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Gene3D G3DSA:2.20.25.90 34 95 8.5E-15 T 29-03-2018 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 39 92 2.6E-17 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS13305 c48a24e6b2f2ae0e474cb0db98254036 828 Pfam PF00384 Molybdopterin oxidoreductase 96 567 8.8E-92 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS00545 16e09361c78308e59955323f408e9c8f 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.728 T 29-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS00545 16e09361c78308e59955323f408e9c8f 343 Pfam PF05175 Methyltransferase small domain 167 333 5.8E-61 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM460_RS00545 16e09361c78308e59955323f408e9c8f 343 SUPERFAMILY SSF53335 154 315 1.49E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00545 16e09361c78308e59955323f408e9c8f 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS00545 16e09361c78308e59955323f408e9c8f 343 Gene3D G3DSA:3.40.50.150 159 343 7.9E-35 T 29-03-2018 AM460_RS00545 16e09361c78308e59955323f408e9c8f 343 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.5E-56 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 7.1E-5 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 526 0.39 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 SMART SM00382 34 306 1.7E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 SMART SM00382 311 502 1.1E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 Pfam PF00005 ABC transporter 26 184 5.7E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 Pfam PF00005 ABC transporter 302 454 5.0E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 SUPERFAMILY SSF52540 276 525 7.25E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 Gene3D G3DSA:3.40.50.300 272 528 8.4E-72 T 29-03-2018 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 Gene3D G3DSA:3.40.50.300 2 267 2.0E-69 T 29-03-2018 AM460_RS13440 cb90657b00ccf5c180a023bd02b4d8fd 529 SUPERFAMILY SSF52540 5 256 7.28E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 3.2E-30 T 29-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Gene3D G3DSA:1.10.10.10 449 499 7.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.3E-120 T 29-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04546 Sigma-70, non-essential region 137 348 1.1E-74 T 29-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 SUPERFAMILY SSF88659 452 525 8.78E-21 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 SUPERFAMILY SSF88946 113 446 1.11E-103 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04539 Sigma-70 region 3 458 533 3.5E-29 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 SUPERFAMILY SSF88659 509 611 2.55E-25 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Gene3D G3DSA:1.10.10.10 541 612 6.8E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Gene3D G3DSA:1.10.601.10 3 112 3.8E-13 T 29-03-2018 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Gene3D G3DSA:1.10.601.10 113 448 8.1E-109 T 29-03-2018 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04545 Sigma-70, region 4 547 600 1.0E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.778 T 29-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AM460_RS08130 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.8E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS05335 d4319c327013241cc080b2ae0ccd2267 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.4E-133 T 29-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM460_RS05335 d4319c327013241cc080b2ae0ccd2267 231 SUPERFAMILY SSF53639 1 223 6.67E-70 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS05335 d4319c327013241cc080b2ae0ccd2267 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.4E-46 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS05335 d4319c327013241cc080b2ae0ccd2267 231 Gene3D G3DSA:3.40.225.10 1 231 3.9E-58 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS05335 d4319c327013241cc080b2ae0ccd2267 231 SMART SM01007 7 198 3.9E-68 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS25395 009b981acb9ddf0a9dd6996be35184c1 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 3.2E-191 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS25395 009b981acb9ddf0a9dd6996be35184c1 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 2.0E-156 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS25395 009b981acb9ddf0a9dd6996be35184c1 382 SUPERFAMILY SSF53756 9 361 4.71E-29 T 29-03-2018 AM460_RS25395 009b981acb9ddf0a9dd6996be35184c1 382 Gene3D G3DSA:3.40.50.2000 1 184 4.0E-4 T 29-03-2018 AM460_RS25395 009b981acb9ddf0a9dd6996be35184c1 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.644 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS25395 009b981acb9ddf0a9dd6996be35184c1 382 Gene3D G3DSA:3.40.50.2000 185 367 3.1E-13 T 29-03-2018 AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 SUPERFAMILY SSF140570 119 281 1.23E-77 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.981 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF17192 MukF middle domain 121 281 4.5E-85 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 Gene3D G3DSA:1.10.10.10 24 116 2.4E-40 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 SUPERFAMILY SSF46785 8 118 1.83E-48 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF17193 MukF C-terminal domain 283 440 5.1E-81 T 29-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF03882 MukF winged-helix domain 3 117 8.3E-58 T 29-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AM460_RS20910 3c613cad0e6152bbcccc71ae2e7b1dae 440 PIRSF PIRSF018282 1 440 4.2E-245 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 SMART SM00895 159 287 2.8E-10 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 Gene3D G3DSA:1.10.10.10 1 71 9.9E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.5E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.5E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 Gene3D G3DSA:1.20.120.530 155 304 2.5E-15 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 Gene3D G3DSA:1.10.10.10 85 154 2.9E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 Pfam PF07729 FCD domain 159 286 6.9E-9 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 SUPERFAMILY SSF46785 93 149 2.42E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 59 8.1E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 SUPERFAMILY SSF46785 3 72 9.1E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00620 aa25e4320d437c9538d2dd221fc6affd 304 SUPERFAMILY SSF48008 157 294 1.67E-12 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS18765 ccc0dabf33b043cd75b15f1dd82c573d 212 Pfam PF03922 OmpW family 23 212 4.6E-70 T 29-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AM460_RS18765 ccc0dabf33b043cd75b15f1dd82c573d 212 Gene3D G3DSA:2.40.160.20 22 212 6.7E-34 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS18765 ccc0dabf33b043cd75b15f1dd82c573d 212 SUPERFAMILY SSF56925 28 212 1.7E-25 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 4.8E-27 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 1.9E-13 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 6.0E-25 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 Gene3D G3DSA:1.10.645.10 380 535 1.5E-31 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 Gene3D G3DSA:1.10.645.10 175 379 6.7E-45 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 467 537 5.6E-11 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 1.3E-34 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 SUPERFAMILY SSF56762 193 537 4.45E-109 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10665 69b405b4c53f7731c9eea24de52881a1 569 SUPERFAMILY SSF143243 9 194 1.83E-47 T 29-03-2018 AM460_RS15190 01b30313efcc8f018b395c1f4c2b2207 471 Gene3D G3DSA:3.40.50.300 169 454 4.7E-33 T 29-03-2018 AM460_RS15190 01b30313efcc8f018b395c1f4c2b2207 471 Pfam PF03796 DnaB-like helicase C terminal domain 187 430 2.8E-61 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM460_RS15190 01b30313efcc8f018b395c1f4c2b2207 471 SUPERFAMILY SSF48024 7 115 1.18E-28 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM460_RS15190 01b30313efcc8f018b395c1f4c2b2207 471 Pfam PF00772 DnaB-like helicase N terminal domain 8 109 2.4E-26 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM460_RS15190 01b30313efcc8f018b395c1f4c2b2207 471 SUPERFAMILY SSF52540 187 258 3.75E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS15190 01b30313efcc8f018b395c1f4c2b2207 471 SUPERFAMILY SSF52540 285 435 3.75E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS15190 01b30313efcc8f018b395c1f4c2b2207 471 Gene3D G3DSA:1.10.860.10 3 150 4.2E-30 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM460_RS24515 322bda0adc376df38fa44767159b44d3 207 Pfam PF15977 Winged helix-turn-helix DNA binding 138 205 1.5E-29 T 29-03-2018 AM460_RS24515 322bda0adc376df38fa44767159b44d3 207 Hamap MF_02072 Inhibitor of hydrogen peroxide resistance [iprA]. 1 207 46.285 T 29-03-2018 IPR034719 Inhibitor of hydrogen peroxide resistance AM460_RS24515 322bda0adc376df38fa44767159b44d3 207 SUPERFAMILY SSF51206 27 123 2.07E-6 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM460_RS24515 322bda0adc376df38fa44767159b44d3 207 Gene3D G3DSA:1.10.10.10 135 200 4.7E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24515 322bda0adc376df38fa44767159b44d3 207 Gene3D G3DSA:2.60.120.10 13 126 8.1E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS06565 693b315dcca58aea4e10ca149cda4777 268 Gene3D G3DSA:1.20.1080.10 1 260 7.3E-60 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM460_RS06565 693b315dcca58aea4e10ca149cda4777 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 1.9E-84 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM460_RS06565 693b315dcca58aea4e10ca149cda4777 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site AM460_RS06565 693b315dcca58aea4e10ca149cda4777 268 Pfam PF01226 Formate/nitrite transporter 20 247 9.1E-57 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM460_RS06565 693b315dcca58aea4e10ca149cda4777 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site AM460_RS07565 b2556f2cdc9741bd5d233d576a33c8ef 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.0E-102 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM460_RS07565 b2556f2cdc9741bd5d233d576a33c8ef 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS07565 b2556f2cdc9741bd5d233d576a33c8ef 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS07565 b2556f2cdc9741bd5d233d576a33c8ef 282 Pfam PF00809 Pterin binding enzyme 18 257 1.1E-90 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS07565 b2556f2cdc9741bd5d233d576a33c8ef 282 Gene3D G3DSA:3.20.20.20 14 154 5.7E-59 T 29-03-2018 AM460_RS07565 b2556f2cdc9741bd5d233d576a33c8ef 282 Gene3D G3DSA:3.20.20.20 155 276 1.6E-49 T 29-03-2018 AM460_RS07565 b2556f2cdc9741bd5d233d576a33c8ef 282 SUPERFAMILY SSF51717 6 274 1.1E-105 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 SUPERFAMILY SSF53732 2 464 5.1E-168 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.30.499.10 1 152 1.9E-40 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 5.8E-284 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.30.499.10 304 466 9.7E-53 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 286 300 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 82 95 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 119 132 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 195 208 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 343 354 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 399 412 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 209 222 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 133 148 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 108 116 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.40.1060.10 153 288 4.2E-44 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.866 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM460_RS26025 4d42f5f16566dbb9e6cade35cf385fe1 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 6.2E-161 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18455 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS18455 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 132 366 7.9E-22 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS18455 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:1.10.10.60 7 51 3.9E-7 T 29-03-2018 AM460_RS18455 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 1.9E-19 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS14355 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS14355 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 132 366 7.9E-22 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS14355 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:1.10.10.60 7 51 3.9E-7 T 29-03-2018 AM460_RS14355 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 1.9E-19 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS10100 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS10100 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 132 366 7.9E-22 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS10100 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:1.10.10.60 7 51 3.9E-7 T 29-03-2018 AM460_RS10100 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 1.9E-19 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS21310 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS21310 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 132 366 7.9E-22 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS21310 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:1.10.10.60 7 51 3.9E-7 T 29-03-2018 AM460_RS21310 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 1.9E-19 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 SMART SM00091 111 177 1.0E-6 T 29-03-2018 IPR000014 PAS domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 Gene3D G3DSA:3.20.20.450 403 661 4.4E-88 T 29-03-2018 IPR001633 EAL domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 Pfam PF13426 PAS domain 123 225 1.3E-9 T 29-03-2018 IPR000014 PAS domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 394 2.1E-35 T 29-03-2018 IPR000160 GGDEF domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 Pfam PF00563 EAL domain 412 644 1.1E-64 T 29-03-2018 IPR001633 EAL domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 SMART SM00052 405 649 1.1E-118 T 29-03-2018 IPR001633 EAL domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 Gene3D G3DSA:3.30.70.270 235 402 1.5E-55 T 29-03-2018 AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 SUPERFAMILY SSF141868 412 657 2.48E-81 T 29-03-2018 IPR001633 EAL domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 Gene3D G3DSA:3.30.450.20 98 234 4.3E-18 T 29-03-2018 AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 SUPERFAMILY SSF55073 243 397 3.06E-44 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 SMART SM00267 226 395 1.2E-69 T 29-03-2018 IPR000160 GGDEF domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 233 2.5E-13 T 29-03-2018 IPR000014 PAS domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 SUPERFAMILY SSF55785 123 234 1.47E-15 T 29-03-2018 IPR000014 PAS domain AM460_RS18210 e70b963e9b37fb38fa49c76112e8eb68 661 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 2.2E-46 T 29-03-2018 IPR000160 GGDEF domain AM460_RS20585 71fda564349ddad227f5aca5ed160d5c 230 Gene3D G3DSA:3.40.50.2300 1 127 2.9E-31 T 29-03-2018 AM460_RS20585 71fda564349ddad227f5aca5ed160d5c 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 1.2E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS20585 71fda564349ddad227f5aca5ed160d5c 230 SMART SM00862 153 225 4.8E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS20585 71fda564349ddad227f5aca5ed160d5c 230 Gene3D G3DSA:1.10.10.10 128 230 4.7E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20585 71fda564349ddad227f5aca5ed160d5c 230 Pfam PF00072 Response regulator receiver domain 5 113 3.8E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS20585 71fda564349ddad227f5aca5ed160d5c 230 SUPERFAMILY SSF52172 3 190 2.28E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS20585 71fda564349ddad227f5aca5ed160d5c 230 SMART SM00448 3 113 1.2E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS12065 9e891f8fa93a3ab5935aac0011369945 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS12065 9e891f8fa93a3ab5935aac0011369945 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 310 2.1E-101 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS12065 9e891f8fa93a3ab5935aac0011369945 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS12065 9e891f8fa93a3ab5935aac0011369945 316 Hamap MF_00492 Transaldolase [tal]. 1 316 53.052 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS12065 9e891f8fa93a3ab5935aac0011369945 316 SUPERFAMILY SSF51569 1 315 1.63E-114 T 29-03-2018 AM460_RS12065 9e891f8fa93a3ab5935aac0011369945 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 4.5E-165 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS12065 9e891f8fa93a3ab5935aac0011369945 316 Gene3D G3DSA:3.20.20.70 1 316 6.5E-118 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 SUPERFAMILY SSF53067 2 242 1.22E-73 T 29-03-2018 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.3E-87 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 3.5E-196 T 29-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 SUPERFAMILY SSF53067 242 482 4.86E-63 T 29-03-2018 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 Gene3D G3DSA:3.30.420.40 238 481 3.2E-58 T 29-03-2018 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 PIRSF PIRSF000538 1 484 2.0E-138 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 2.7E-32 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS05435 fbb43e1b9dec62814528559e91f48b26 484 Gene3D G3DSA:3.30.420.40 1 237 6.9E-79 T 29-03-2018 AM460_RS22580 8a48f64c3b1ce1d37bbfbd89117db733 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 7.8E-51 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM460_RS22580 8a48f64c3b1ce1d37bbfbd89117db733 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 5.9E-75 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM460_RS12685 72f361d856655f6a303138073644d75e 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.694 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM460_RS12685 72f361d856655f6a303138073644d75e 310 Gene3D G3DSA:1.10.8.10 14 101 1.3E-11 T 29-03-2018 AM460_RS12685 72f361d856655f6a303138073644d75e 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 2.9E-139 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM460_RS12685 72f361d856655f6a303138073644d75e 310 Gene3D G3DSA:3.40.50.150 102 275 2.1E-36 T 29-03-2018 AM460_RS12685 72f361d856655f6a303138073644d75e 310 Pfam PF05175 Methyltransferase small domain 132 215 2.7E-16 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM460_RS12685 72f361d856655f6a303138073644d75e 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS12685 72f361d856655f6a303138073644d75e 310 SUPERFAMILY SSF53335 15 293 3.38E-54 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS12685 72f361d856655f6a303138073644d75e 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 305 6.0E-110 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM460_RS12685 72f361d856655f6a303138073644d75e 310 PIRSF PIRSF037167 1 307 7.7E-151 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM460_RS21450 d9d95d8f7664ae1ee4207bcf8a9a22a5 344 PIRSF PIRSF018494 1 344 2.4E-154 T 29-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AM460_RS21450 d9d95d8f7664ae1ee4207bcf8a9a22a5 344 Pfam PF04860 Phage portal protein 89 322 4.9E-12 T 29-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM460_RS21450 d9d95d8f7664ae1ee4207bcf8a9a22a5 344 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 332 4.5E-75 T 29-03-2018 IPR006430 Phage portal protein PBSX family AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.842 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 2.8E-201 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 SMART SM00840 341 402 4.6E-29 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 SUPERFAMILY SSF52374 1 313 1.38E-103 T 29-03-2018 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 Gene3D G3DSA:3.40.50.620 1 305 2.3E-93 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.2E-146 T 29-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 Pfam PF09190 DALR domain 341 402 1.2E-25 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 SUPERFAMILY SSF47323 316 460 4.05E-45 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS23695 2047dcdd64a4c4916fea2b7a432bd97e 461 Gene3D G3DSA:1.20.120.640 306 392 1.4E-22 T 29-03-2018 AM460_RS25110 ef04b3e991f9708024fe67ba1f39054d 150 SUPERFAMILY SSF55729 1 146 1.03E-28 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS25110 ef04b3e991f9708024fe67ba1f39054d 150 Gene3D G3DSA:3.40.630.30 85 150 2.3E-8 T 29-03-2018 AM460_RS25110 ef04b3e991f9708024fe67ba1f39054d 150 Pfam PF13673 Acetyltransferase (GNAT) domain 31 141 1.1E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS25110 ef04b3e991f9708024fe67ba1f39054d 150 Gene3D G3DSA:3.40.630.30 1 84 4.1E-15 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 SMART SM00926 221 275 7.0E-10 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.40.50.740 460 704 4.1E-20 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF54292 1 77 1.09E-18 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.10.20.30 1 165 1.1E-10 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.40.50.740 281 443 1.6E-9 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 8.1E-11 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:2.20.25.90 214 280 8.8E-10 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF54862 81 213 2.93E-34 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 SMART SM00929 88 128 1.9E-19 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF53706 219 688 4.71E-84 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.2E-11 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:2.40.40.20 824 901 1.6E-13 T 29-03-2018 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF01568 Molydopterin dinucleotide binding domain 828 890 1.0E-6 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF50692 814 891 1.06E-13 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF00384 Molybdopterin oxidoreductase 562 638 8.8E-8 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12925 9605ed4c3cda8f087c1c3ba083eb409c 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 1.0E-205 T 29-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS18705 6f62f46ff0385273fcfb878f6ef332a3 141 Gene3D G3DSA:1.10.3600.10 4 114 2.1E-39 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT AM460_RS18705 6f62f46ff0385273fcfb878f6ef332a3 141 Pfam PF06254 Putative bacterial toxin ydaT 48 102 1.0E-10 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT AM460_RS13085 dca7629966dcb875999602dbfe96fd9c 260 SUPERFAMILY SSF46785 7 79 2.31E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13085 dca7629966dcb875999602dbfe96fd9c 260 Pfam PF09339 IclR helix-turn-helix domain 9 58 1.8E-8 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS13085 dca7629966dcb875999602dbfe96fd9c 260 Gene3D G3DSA:3.30.450.40 84 254 2.8E-49 T 29-03-2018 IPR029016 GAF domain-like AM460_RS13085 dca7629966dcb875999602dbfe96fd9c 260 Gene3D G3DSA:1.10.10.10 2 83 1.4E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13085 dca7629966dcb875999602dbfe96fd9c 260 SUPERFAMILY SSF55781 72 251 2.55E-48 T 29-03-2018 IPR029016 GAF domain-like AM460_RS13085 dca7629966dcb875999602dbfe96fd9c 260 Pfam PF01614 Bacterial transcriptional regulator 122 247 3.7E-41 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS13085 dca7629966dcb875999602dbfe96fd9c 260 SMART SM00346 7 95 2.5E-33 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS22705 952a12588809478949035bbbb8605308 289 SMART SM00881 4 100 2.2E-37 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS22705 952a12588809478949035bbbb8605308 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AM460_RS22705 952a12588809478949035bbbb8605308 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.416 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS22705 952a12588809478949035bbbb8605308 289 Pfam PF00549 CoA-ligase 151 271 4.9E-20 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS22705 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-39 T 29-03-2018 AM460_RS22705 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-39 T 29-03-2018 AM460_RS22705 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-39 T 29-03-2018 AM460_RS22705 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-39 T 29-03-2018 AM460_RS22705 952a12588809478949035bbbb8605308 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.1E-146 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS22705 952a12588809478949035bbbb8605308 289 Pfam PF02629 CoA binding domain 6 99 1.9E-31 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS22705 952a12588809478949035bbbb8605308 289 SUPERFAMILY SSF52210 123 288 4.97E-57 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS22705 952a12588809478949035bbbb8605308 289 Gene3D G3DSA:3.40.50.261 120 289 2.7E-56 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS22705 952a12588809478949035bbbb8605308 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AM460_RS22705 952a12588809478949035bbbb8605308 289 Gene3D G3DSA:3.40.50.720 1 119 9.7E-45 T 29-03-2018 AM460_RS22705 952a12588809478949035bbbb8605308 289 PIRSF PIRSF001553 1 289 9.9E-136 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS22705 952a12588809478949035bbbb8605308 289 SUPERFAMILY SSF51735 1 122 1.08E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS25680 0c4b65c44498a22741210287e17540e2 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.341 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM460_RS25680 0c4b65c44498a22741210287e17540e2 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-66 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM460_RS25680 0c4b65c44498a22741210287e17540e2 126 SUPERFAMILY SSF50692 1 121 7.95E-48 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS25680 0c4b65c44498a22741210287e17540e2 126 PIRSF PIRSF006246 1 125 1.2E-50 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM460_RS25680 0c4b65c44498a22741210287e17540e2 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.3E-47 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM460_RS25680 0c4b65c44498a22741210287e17540e2 126 Gene3D G3DSA:2.40.40.20 1 117 4.0E-52 T 29-03-2018 AM460_RS25680 0c4b65c44498a22741210287e17540e2 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 5.5E-69 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 Pfam PF14821 Threonine synthase N terminus 8 80 7.4E-14 T 29-03-2018 IPR029144 Threonine synthase, N-terminal AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 Gene3D G3DSA:3.40.50.1100 101 197 2.6E-18 T 29-03-2018 AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 Gene3D G3DSA:3.90.1380.10 1 81 7.6E-19 T 29-03-2018 IPR029144 Threonine synthase, N-terminal AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 369 7.1E-24 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 Gene3D G3DSA:3.40.50.1100 322 395 2.5E-13 T 29-03-2018 AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 Gene3D G3DSA:3.40.50.1100 198 321 4.8E-40 T 29-03-2018 AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 SUPERFAMILY SSF53686 1 426 1.96E-132 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS00085 0f672c1a849e2be046f5232b655c4e47 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 9.1E-131 T 29-03-2018 IPR004450 Threonine synthase-like AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SUPERFAMILY SSF48452 484 623 6.5E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Pfam PF17128 Domain of unknown function (DUF5107) 39 343 1.2E-68 T 29-03-2018 IPR033396 Domain of unknown function DUF5107 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SMART SM00028 778 812 34.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SMART SM00028 744 777 0.85 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SMART SM00028 535 568 73.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SMART SM00028 569 602 0.015 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SMART SM00028 495 528 110.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SUPERFAMILY SSF48452 736 813 3.8E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SUPERFAMILY SSF48452 568 607 3.8E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 SUPERFAMILY SSF48452 892 1009 1.52E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Gene3D G3DSA:2.70.98.10 45 276 5.7E-4 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Gene3D G3DSA:1.25.40.10 381 512 0.14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Gene3D G3DSA:1.25.40.10 550 625 1.0E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Gene3D G3DSA:1.25.40.10 887 1082 1.9E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Gene3D G3DSA:1.25.40.10 513 549 1.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Pfam PF13432 Tetratricopeptide repeat 542 602 1.4E-4 T 29-03-2018 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Pfam PF13432 Tetratricopeptide repeat 754 813 0.0053 T 29-03-2018 AM460_RS11665 cd9803928f950f7d08b673b0092ec8f0 1093 Gene3D G3DSA:1.25.40.10 626 819 1.1E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:3.40.50.300 2 73 7.3E-11 T 29-03-2018 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.095 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:3.40.50.300 74 203 7.6E-31 T 29-03-2018 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50465 298 393 2.76E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.7E-34 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.0E-239 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 5.4E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.0E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-33 T 29-03-2018 AM460_RS06720 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 206 299 1.3E-32 T 29-03-2018 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 SUPERFAMILY SSF101904 533 851 4.05E-111 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Gene3D G3DSA:3.90.199.10 34 284 7.4E-115 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.1E-10 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 9.2E-11 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 688 4.0E-7 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 5.5E-13 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 9.9E-14 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 8.0E-15 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.505 T 29-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 SUPERFAMILY SSF56719 30 521 1.96E-181 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Gene3D G3DSA:2.120.10.90 533 856 2.0E-132 T 29-03-2018 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 SMART SM00434 11 499 1.1E-297 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.5E-153 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Gene3D G3DSA:1.10.268.10 376 497 3.0E-49 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 29-03-2018 AM460_RS13170 d4a34a9fe32cd4eab6bd71bd509f5411 875 Gene3D G3DSA:3.90.199.10 285 375 3.7E-9 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 Gene3D G3DSA:3.90.1150.10 290 405 2.4E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 SUPERFAMILY SSF53383 13 397 2.82E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.403 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 Pfam PF00202 Aminotransferase class-III 21 396 9.5E-126 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 Hamap MF_01173 Succinylornithine transaminase [astC]. 1 406 77.199 T 29-03-2018 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 2.2E-168 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 401 2.1E-228 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 PIRSF PIRSF000521 26 158 2.2E-5 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 PIRSF PIRSF000521 165 400 1.2E-39 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 Gene3D G3DSA:3.90.1150.10 6 171 2.2E-47 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS16270 98c66684f1b7124d2b69bfd116054a11 406 Gene3D G3DSA:3.40.640.10 172 289 2.2E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 4.7E-208 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 SUPERFAMILY SSF51161 255 438 2.62E-51 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Gene3D G3DSA:2.160.10.10 245 318 8.3E-18 T 29-03-2018 AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Gene3D G3DSA:2.160.10.10 319 440 1.5E-33 T 29-03-2018 AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.135 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Gene3D G3DSA:3.90.550.10 3 244 1.1E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 3.9E-20 T 29-03-2018 IPR025877 MobA-like NTP transferase AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 SUPERFAMILY SSF53448 5 252 9.6E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.2E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0029 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS04545 3004941e1835352222e7b1036a89aa67 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 6.0E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 SMART SM00984 324 420 3.9E-21 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 Gene3D G3DSA:3.40.50.720 4 205 2.7E-45 T 29-03-2018 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 SUPERFAMILY SSF48179 206 298 2.72E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 2.3E-60 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 Gene3D G3DSA:1.20.5.170 206 229 1.0E-14 T 29-03-2018 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 SUPERFAMILY SSF51735 5 198 6.85E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 85.283 T 29-03-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 Gene3D G3DSA:3.40.50.720 230 420 1.2E-49 T 29-03-2018 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 3.5E-119 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 PIRSF PIRSF000124 4 419 5.3E-78 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 5.2E-27 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 PIRSF PIRSF500136 1 420 1.2E-148 T 29-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 4.9E-18 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS04260 badb47e52604b0b16c048acc31f95500 420 SUPERFAMILY SSF52413 311 419 1.96E-24 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM460_RS05315 1e2ac847fa8459f7480c7d61b2b05fa7 512 Pfam PF00171 Aldehyde dehydrogenase family 33 498 5.9E-164 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS05315 1e2ac847fa8459f7480c7d61b2b05fa7 512 Gene3D G3DSA:3.40.309.10 285 486 6.8E-65 T 29-03-2018 AM460_RS05315 1e2ac847fa8459f7480c7d61b2b05fa7 512 SUPERFAMILY SSF53720 21 505 2.62E-161 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS05315 1e2ac847fa8459f7480c7d61b2b05fa7 512 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM460_RS05315 1e2ac847fa8459f7480c7d61b2b05fa7 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM460_RS05315 1e2ac847fa8459f7480c7d61b2b05fa7 512 Gene3D G3DSA:3.40.605.10 18 284 1.3E-95 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 1.1E-146 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 Pfam PF02926 THUMP domain 28 161 1.1E-28 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 SUPERFAMILY SSF52402 174 372 7.28E-42 T 29-03-2018 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 SUPERFAMILY SSF52821 407 481 1.58E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 SMART SM00981 75 165 3.8E-26 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-81 T 29-03-2018 IPR020536 Thil, AANH domain GO:0004810 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 232.096 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 Gene3D G3DSA:3.40.250.10 403 481 2.4E-9 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 Gene3D G3DSA:3.30.2300.10 84 162 1.5E-21 T 29-03-2018 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 2.0E-40 T 29-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 Gene3D G3DSA:3.40.50.620 175 400 3.5E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 Gene3D G3DSA:3.30.70.1510 2 82 6.8E-22 T 29-03-2018 AM460_RS24255 51e2bf0db5e75f866952ca80c28d9e8a 482 SUPERFAMILY SSF143437 1 173 6.98E-51 T 29-03-2018 AM460_RS06700 8e96038d70f7e04647cfa404b02419d5 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 30.492 T 29-03-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 AM460_RS06700 8e96038d70f7e04647cfa404b02419d5 95 Pfam PF04077 DsrH like protein 7 91 1.1E-29 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM460_RS06700 8e96038d70f7e04647cfa404b02419d5 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 1.3E-33 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM460_RS06700 8e96038d70f7e04647cfa404b02419d5 95 SUPERFAMILY SSF75169 1 95 3.83E-32 T 29-03-2018 IPR027396 DsrEFH-like AM460_RS06700 8e96038d70f7e04647cfa404b02419d5 95 Gene3D G3DSA:3.40.1260.10 1 93 1.6E-23 T 29-03-2018 AM460_RS12700 10c02a589a7eba998fe90721c892248e 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 3.3E-42 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM460_RS11925 313e3944fc2a0adf6530841e4fbd8fe0 212 SUPERFAMILY SSF53328 1 205 8.24E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS11925 313e3944fc2a0adf6530841e4fbd8fe0 212 Pfam PF00551 Formyl transferase 1 181 3.6E-68 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS11925 313e3944fc2a0adf6530841e4fbd8fe0 212 Gene3D G3DSA:3.40.50.170 1 197 1.5E-69 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS11925 313e3944fc2a0adf6530841e4fbd8fe0 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 191 6.5E-85 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM460_RS11925 313e3944fc2a0adf6530841e4fbd8fe0 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS11925 313e3944fc2a0adf6530841e4fbd8fe0 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 31.843 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Gene3D G3DSA:3.40.50.2300 1 97 3.2E-24 T 29-03-2018 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 8 528 3.6E-266 T 29-03-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Gene3D G3DSA:3.40.50.300 218 399 2.4E-26 T 29-03-2018 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 SMART SM00382 238 401 1.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Gene3D G3DSA:3.40.50.10660 98 176 1.5E-24 T 29-03-2018 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 SUPERFAMILY SSF46689 444 527 6.45E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Gene3D G3DSA:1.10.8.60 400 479 9.4E-15 T 29-03-2018 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 313 328 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 SUPERFAMILY SSF159800 12 195 6.28E-54 T 29-03-2018 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Gene3D G3DSA:1.10.10.60 495 527 3.4E-10 T 29-03-2018 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Gene3D G3DSA:1.20.5.170 178 217 1.2E-19 T 29-03-2018 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 444 453 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 SUPERFAMILY SSF52540 217 461 1.49E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Pfam PF06506 Propionate catabolism activator 36 196 3.7E-50 T 29-03-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Pfam PF02954 Bacterial regulatory protein, Fis family 498 527 2.6E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 495 512 4.1E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 512 528 4.1E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS24665 0635f8d2e902ff314da7c274bec6cf5f 528 Pfam PF00158 Sigma-54 interaction domain 219 393 8.6E-65 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS19660 475215658e4d4fdcfe0e10126ff7fda9 341 Gene3D G3DSA:3.90.1690.10 2 341 5.5E-68 T 29-03-2018 AM460_RS19660 475215658e4d4fdcfe0e10126ff7fda9 341 Pfam PF03864 Phage major capsid protein E 4 338 3.9E-72 T 29-03-2018 IPR005564 Major capsid protein GpE GO:0019028 AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 Gene3D G3DSA:1.10.10.10 2 79 1.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 SMART SM00345 18 77 4.8E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 5.3E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 SMART SM00895 106 227 2.9E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 SUPERFAMILY SSF48008 106 226 3.14E-19 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 Gene3D G3DSA:1.20.120.530 95 228 1.3E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 Pfam PF07729 FCD domain 108 226 1.8E-19 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.4E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.4E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04415 a5ae3776a8b5c14e52624dd28e568860 230 SUPERFAMILY SSF46785 10 81 7.61E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.0E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 SUPERFAMILY SSF47729 1 90 8.54E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 SMART SM00411 1 90 3.1E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS03045 4939a1cdd4b26c7d9053b02c16db7e41 90 Gene3D G3DSA:4.10.520.10 1 90 7.1E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 SUPERFAMILY SSF160240 209 288 8.37E-26 T 29-03-2018 AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 67.202 T 29-03-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Gene3D G3DSA:1.20.1510.10 8 206 2.9E-41 T 29-03-2018 AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Pfam PF01545 Cation efflux family 14 206 4.7E-44 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 3.7E-80 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 2.0E-26 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Gene3D G3DSA:3.30.70.1350 207 290 5.7E-25 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM460_RS03500 58c994fb414b59b8bf6bb1f8dcb64fe7 300 SUPERFAMILY SSF161111 8 207 2.62E-51 T 29-03-2018 AM460_RS05345 0d40cf5ff21309422b441d8ce65defdb 220 SMART SM00934 5 207 2.8E-35 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS05345 0d40cf5ff21309422b441d8ce65defdb 220 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 205 9.2E-26 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS05345 0d40cf5ff21309422b441d8ce65defdb 220 SUPERFAMILY SSF51366 2 215 8.87E-37 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS05345 0d40cf5ff21309422b441d8ce65defdb 220 Gene3D G3DSA:3.20.20.70 1 216 6.5E-32 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS08665 019db8469ccd4f5ab74e1983378a354d 390 Gene3D G3DSA:3.90.1150.10 278 390 5.0E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS08665 019db8469ccd4f5ab74e1983378a354d 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM460_RS08665 019db8469ccd4f5ab74e1983378a354d 390 Pfam PF00155 Aminotransferase class I and II 44 384 3.1E-54 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS08665 019db8469ccd4f5ab74e1983378a354d 390 SUPERFAMILY SSF53383 8 387 4.26E-98 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS08665 019db8469ccd4f5ab74e1983378a354d 390 Gene3D G3DSA:3.40.640.10 61 277 2.8E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS13665 0fce27d4f1889da18e5823320779c3b7 316 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.002 T 29-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AM460_RS13665 0fce27d4f1889da18e5823320779c3b7 316 Pfam PF01207 Dihydrouridine synthase (Dus) 5 306 3.9E-96 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS13665 0fce27d4f1889da18e5823320779c3b7 316 PIRSF PIRSF006621 1 315 9.1E-84 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS13665 0fce27d4f1889da18e5823320779c3b7 316 SUPERFAMILY SSF51395 1 302 8.61E-71 T 29-03-2018 AM460_RS13665 0fce27d4f1889da18e5823320779c3b7 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS13665 0fce27d4f1889da18e5823320779c3b7 316 Gene3D G3DSA:3.20.20.70 1 242 3.5E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 SMART SM00898 2 110 1.3E-14 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 SUPERFAMILY SSF81624 2 127 5.36E-27 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 SMART SM01232 126 221 7.1E-17 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 Gene3D G3DSA:3.20.190.10 2 120 4.1E-25 T 29-03-2018 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 2.1E-11 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 Gene3D G3DSA:1.10.8.50 121 263 4.7E-36 T 29-03-2018 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.2E-8 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 SUPERFAMILY SSF57716 226 262 4.46E-11 T 29-03-2018 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 60.426 T 29-03-2018 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 1.7E-10 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM460_RS22810 93fa5e8a06eefde1577c124219dfde6e 263 SUPERFAMILY SSF46946 126 214 2.75E-17 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 Gene3D G3DSA:3.40.640.10 1 232 2.6E-52 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-89 T 29-03-2018 IPR000192 Aminotransferase class V domain AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 Gene3D G3DSA:3.90.1150.10 233 404 6.6E-53 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 PIRSF PIRSF005572 2 384 6.9E-145 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.5E-236 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 SUPERFAMILY SSF53383 5 391 4.52E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS11745 858f1fe35d5f51a75188c72882269fe8 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 56.355 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM460_RS20130 7ede1cb10caf9adcae35773b3f04e86d 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 185 4.4E-75 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS20130 7ede1cb10caf9adcae35773b3f04e86d 194 SUPERFAMILY SSF52972 2 185 1.05E-61 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS20130 7ede1cb10caf9adcae35773b3f04e86d 194 PIRSF PIRSF006305 1 193 5.5E-46 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS20130 7ede1cb10caf9adcae35773b3f04e86d 194 Gene3D G3DSA:3.90.950.10 2 194 3.2E-61 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS20130 7ede1cb10caf9adcae35773b3f04e86d 194 Pfam PF02545 Maf-like protein 4 186 8.1E-47 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS20130 7ede1cb10caf9adcae35773b3f04e86d 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.739 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS25510 0e6003b175c65911bc68fb215270015c 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 9.6E-138 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS25510 0e6003b175c65911bc68fb215270015c 232 SUPERFAMILY SSF53167 1 229 4.32E-75 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS25510 0e6003b175c65911bc68fb215270015c 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.921 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS25510 0e6003b175c65911bc68fb215270015c 232 Gene3D G3DSA:3.40.50.1580 1 232 4.3E-57 T 29-03-2018 AM460_RS25510 0e6003b175c65911bc68fb215270015c 232 Pfam PF01048 Phosphorylase superfamily 2 226 6.4E-49 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 1.9E-142 T 29-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 SUPERFAMILY SSF51905 2 175 1.5E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 SUPERFAMILY SSF51905 265 381 1.5E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 1.9E-136 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 Gene3D G3DSA:3.50.50.60 2 352 4.4E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.4E-14 T 29-03-2018 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 3.4E-14 T 29-03-2018 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.4E-14 T 29-03-2018 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.4E-14 T 29-03-2018 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 Pfam PF01494 FAD binding domain 2 336 4.7E-23 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM460_RS09650 7ff53cab9ee4c09da300651acd8eb9a2 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM460_RS04905 1e4409155f744d98e39a8d4eecbd1286 307 Pfam PF00892 EamA-like transporter family 6 145 6.9E-21 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS04905 1e4409155f744d98e39a8d4eecbd1286 307 Pfam PF00892 EamA-like transporter family 158 290 1.5E-21 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS04905 1e4409155f744d98e39a8d4eecbd1286 307 SUPERFAMILY SSF103481 43 148 1.05E-6 T 29-03-2018 AM460_RS04905 1e4409155f744d98e39a8d4eecbd1286 307 SUPERFAMILY SSF103481 191 296 2.48E-13 T 29-03-2018 AM460_RS04905 1e4409155f744d98e39a8d4eecbd1286 307 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 18 287 2.0E-78 T 29-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AM460_RS07555 a04f362abdb231dcff8b802527688b2f 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.88 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM460_RS07555 a04f362abdb231dcff8b802527688b2f 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.1E-58 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM460_RS07555 a04f362abdb231dcff8b802527688b2f 209 Gene3D G3DSA:3.40.50.150 1 209 1.0E-58 T 29-03-2018 AM460_RS07555 a04f362abdb231dcff8b802527688b2f 209 SUPERFAMILY SSF53335 31 208 1.09E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS07555 a04f362abdb231dcff8b802527688b2f 209 PIRSF PIRSF005461 1 209 1.1E-82 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM460_RS07555 a04f362abdb231dcff8b802527688b2f 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 4.9E-97 T 29-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 AM460_RS18800 208354961a828ed042be128413c103bd 417 SUPERFAMILY SSF51735 242 384 3.94E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18800 208354961a828ed042be128413c103bd 417 Pfam PF02254 TrkA-N domain 246 365 7.4E-20 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM460_RS18800 208354961a828ed042be128413c103bd 417 SUPERFAMILY SSF81324 166 261 8.77E-19 T 29-03-2018 AM460_RS18800 208354961a828ed042be128413c103bd 417 SUPERFAMILY SSF81324 86 119 8.77E-19 T 29-03-2018 AM460_RS18800 208354961a828ed042be128413c103bd 417 Gene3D G3DSA:1.10.287.70 74 226 1.5E-16 T 29-03-2018 AM460_RS18800 208354961a828ed042be128413c103bd 417 Pfam PF07885 Ion channel 149 221 3.5E-15 T 29-03-2018 IPR013099 Potassium channel domain AM460_RS18800 208354961a828ed042be128413c103bd 417 Gene3D G3DSA:3.40.50.720 235 364 2.0E-22 T 29-03-2018 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 3.2E-84 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 PIRSF PIRSF016262 2 210 4.5E-57 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 SUPERFAMILY SSF55681 4 204 2.73E-68 T 29-03-2018 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-24 T 29-03-2018 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 Gene3D G3DSA:3.30.930.10 2 204 3.8E-60 T 29-03-2018 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.636 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 6.3E-7 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM460_RS23225 55788dc4d7c7535f40503fb835a212d1 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 29-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 8.0E-166 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 PIRSF PIRSF000774 1 477 4.0E-153 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 1.0E-15 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 Gene3D G3DSA:1.10.10.10 322 413 9.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 186 203 2.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 376 388 2.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 450 468 2.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 392 403 2.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 2.1E-62 T 29-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AM460_RS07440 8ae15e9195e9e36653306e096f916693 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.1E-70 T 29-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Gene3D G3DSA:2.60.40.10 1019 1122 4.0E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Gene3D G3DSA:2.60.40.10 394 476 5.9E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Gene3D G3DSA:2.60.40.10 862 1018 0.038 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Pfam PF01835 MG2 domain 388 479 1.7E-20 T 29-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 SUPERFAMILY SSF48239 1177 1434 3.53E-44 T 29-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 289 381 6.5E-22 T 29-03-2018 AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Pfam PF00207 Alpha-2-macroglobulin family 977 1056 9.7E-8 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 759 906 2.0E-14 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 SMART SM01360 968 1057 1.9E-20 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Gene3D G3DSA:1.50.10.20 1166 1464 4.6E-26 T 29-03-2018 AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 PIRSF PIRSF038980 1 1653 0.0 T 29-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Gene3D G3DSA:2.60.40.10 638 758 0.014 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 SMART SM01359 758 906 1.5E-33 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Gene3D G3DSA:2.60.40.10 759 821 0.11 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11795 4fe32ade7369f0ebf9441414e276c8d4 1653 Gene3D G3DSA:2.60.40.10 300 370 0.0012 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Pfam PF08447 PAS fold 452 537 6.2E-10 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SUPERFAMILY SSF55785 541 669 5.32E-19 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00091 555 623 5.0E-8 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00091 429 496 0.35 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00091 302 368 1.7E-11 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SUPERFAMILY SSF55073 687 845 2.28E-46 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Gene3D G3DSA:3.30.450.20 483 551 4.6E-4 T 29-03-2018 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SUPERFAMILY SSF55785 309 419 1.11E-21 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SUPERFAMILY SSF55785 438 545 1.15E-14 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00086 629 671 0.021 T 29-03-2018 IPR001610 PAC motif AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00086 502 543 1.8E-5 T 29-03-2018 IPR001610 PAC motif AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00086 375 417 3.6E-9 T 29-03-2018 IPR001610 PAC motif AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Gene3D G3DSA:3.30.450.20 439 482 3.4E-11 T 29-03-2018 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Gene3D G3DSA:3.30.450.20 287 438 3.3E-27 T 29-03-2018 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Gene3D G3DSA:3.30.450.20 552 687 1.3E-22 T 29-03-2018 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Pfam PF13426 PAS domain 314 416 8.4E-11 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 680 842 2.6E-37 T 29-03-2018 IPR000160 GGDEF domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Pfam PF08448 PAS fold 561 672 2.4E-10 T 29-03-2018 IPR013656 PAS fold-4 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Pfam PF00990 Diguanylate cyclase, GGDEF domain 682 838 2.0E-45 T 29-03-2018 IPR000160 GGDEF domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00052 855 1095 1.6E-46 T 29-03-2018 IPR001633 EAL domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Pfam PF05231 MASE1 19 294 1.8E-34 T 29-03-2018 IPR007895 MASE1 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Gene3D G3DSA:3.20.20.450 890 1099 1.3E-20 T 29-03-2018 IPR001633 EAL domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Gene3D G3DSA:3.30.70.270 688 851 3.1E-54 T 29-03-2018 AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SUPERFAMILY SSF141868 899 1096 5.62E-17 T 29-03-2018 IPR001633 EAL domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 SMART SM00267 671 843 7.0E-67 T 29-03-2018 IPR000160 GGDEF domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 553 676 5.4E-13 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 422 1.6E-34 T 29-03-2018 IPR000014 PAS domain AM460_RS14030 c7f14b540052c289e00bd5e8674b7297 1105 Pfam PF00563 EAL domain 897 1088 3.2E-19 T 29-03-2018 IPR001633 EAL domain AM460_RS03085 63ec842ef2e6dad1e508cb609083f7b9 251 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 8 209 1.9E-86 T 29-03-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM460_RS03085 63ec842ef2e6dad1e508cb609083f7b9 251 SUPERFAMILY SSF69572 2 245 1.22E-81 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM460_RS03085 63ec842ef2e6dad1e508cb609083f7b9 251 Gene3D G3DSA:3.40.50.720 1 245 2.5E-73 T 29-03-2018 AM460_RS03085 63ec842ef2e6dad1e508cb609083f7b9 251 Pfam PF00899 ThiF family 9 240 3.2E-65 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 Gene3D G3DSA:3.40.50.720 3 281 2.0E-95 T 29-03-2018 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 Gene3D G3DSA:1.10.1040.10 282 489 1.2E-49 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 SUPERFAMILY SSF48179 283 486 1.94E-54 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 SUPERFAMILY SSF51735 14 281 2.52E-88 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 6.7E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 6.7E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 6.7E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 6.7E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.2E-39 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM460_RS08475 cd7523b2bd592628d364dffc44556ad5 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 454 1.0E-74 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM460_RS23735 533ee63df3c86d61c723d4ad385210bb 271 Pfam PF11392 Protein of unknown function (DUF2877) 159 263 1.3E-28 T 29-03-2018 IPR021530 Protein of unknown function DUF2877 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.948 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 Pfam PF00871 Acetokinase family 6 393 4.6E-178 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 Gene3D G3DSA:3.30.420.40 199 400 2.8E-76 T 29-03-2018 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.3E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.3E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 302 315 2.3E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 176 189 2.3E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 206 227 2.3E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 380 392 2.3E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 Gene3D G3DSA:3.30.420.40 5 198 1.1E-67 T 29-03-2018 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 PIRSF PIRSF000722 2 400 5.5E-143 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 SUPERFAMILY SSF53067 160 398 6.02E-84 T 29-03-2018 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 SUPERFAMILY SSF53067 4 199 3.17E-63 T 29-03-2018 AM460_RS12855 d3380e9e3ca970d9dfbed22064b59906 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 9.7E-188 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 SMART SM00866 90 229 1.8E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 7.5E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 7.5E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 8.7E-24 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 Gene3D G3DSA:1.10.10.10 2 71 7.9E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 Gene3D G3DSA:3.40.1410.10 72 238 1.3E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 SMART SM00345 10 69 2.4E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 Pfam PF07702 UTRA domain 91 229 3.3E-36 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 SUPERFAMILY SSF64288 59 236 6.75E-47 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS22700 aad37c9eb10e4410c7e38655c7486343 240 SUPERFAMILY SSF46785 2 73 4.97E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 2.2E-180 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 Pfam PF03023 MviN-like protein 28 478 1.2E-162 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PIRSF PIRSF002869 1 511 3.3E-184 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.2E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.2E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.2E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.2E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.2E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.2E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.2E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS20220 3e40e9df3be6c55537066637f95dad0f 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.518 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM460_RS14040 33400ec6d0ae67fc66a4a57ef909eb60 193 Gene3D G3DSA:2.70.40.10 2 168 1.1E-43 T 29-03-2018 AM460_RS14040 33400ec6d0ae67fc66a4a57ef909eb60 193 Pfam PF00692 dUTPase 78 185 9.8E-9 T 29-03-2018 IPR029054 dUTPase-like AM460_RS14040 33400ec6d0ae67fc66a4a57ef909eb60 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.6E-67 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM460_RS14040 33400ec6d0ae67fc66a4a57ef909eb60 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.223 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM460_RS14040 33400ec6d0ae67fc66a4a57ef909eb60 193 SUPERFAMILY SSF51283 1 193 9.68E-60 T 29-03-2018 IPR029054 dUTPase-like AM460_RS06210 c408489b35f0e0af9d2c1fbd101cf0b1 446 Pfam PF02447 GntP family permease 5 441 7.4E-169 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS06210 c408489b35f0e0af9d2c1fbd101cf0b1 446 PIRSF PIRSF002746 1 446 5.2E-155 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS06210 c408489b35f0e0af9d2c1fbd101cf0b1 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 2.8E-180 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS03595 444af201730bd8b6d135bb080bb793ae 195 Pfam PF00384 Molybdopterin oxidoreductase 107 155 2.6E-6 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS03595 444af201730bd8b6d135bb080bb793ae 195 SUPERFAMILY SSF53706 35 195 1.57E-57 T 29-03-2018 AM460_RS03595 444af201730bd8b6d135bb080bb793ae 195 Gene3D G3DSA:3.40.50.740 109 195 4.9E-13 T 29-03-2018 AM460_RS03595 444af201730bd8b6d135bb080bb793ae 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 4.0E-19 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS03595 444af201730bd8b6d135bb080bb793ae 195 Gene3D G3DSA:2.20.25.90 37 108 7.6E-21 T 29-03-2018 AM460_RS03595 444af201730bd8b6d135bb080bb793ae 195 SMART SM00926 43 104 4.9E-22 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS03595 444af201730bd8b6d135bb080bb793ae 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM460_RS02615 74f001ecf58a0053fbf03fb3e8c5af9c 93 Pfam PF15940 Family of unknown function 1 90 1.5E-43 T 29-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM460_RS02615 74f001ecf58a0053fbf03fb3e8c5af9c 93 PIRSF PIRSF030798 1 93 6.1E-66 T 29-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM460_RS02615 74f001ecf58a0053fbf03fb3e8c5af9c 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 4.0E-37 T 29-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM460_RS22505 3eb27c078ad558ee99ae3ee4b543bb3b 257 Gene3D G3DSA:3.40.190.10 25 118 2.2E-19 T 29-03-2018 AM460_RS22505 3eb27c078ad558ee99ae3ee4b543bb3b 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 1.0E-50 T 29-03-2018 AM460_RS22505 3eb27c078ad558ee99ae3ee4b543bb3b 257 Gene3D G3DSA:3.40.190.10 119 218 9.2E-33 T 29-03-2018 AM460_RS22505 3eb27c078ad558ee99ae3ee4b543bb3b 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 1.1E-88 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AM460_RS22505 3eb27c078ad558ee99ae3ee4b543bb3b 257 SUPERFAMILY SSF53850 28 255 7.06E-71 T 29-03-2018 AM460_RS22505 3eb27c078ad558ee99ae3ee4b543bb3b 257 PIRSF PIRSF004846 1 257 7.7E-86 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AM460_RS22455 4efb495197c638234c35892befd7eca0 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 15 157 2.1E-38 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM460_RS22455 4efb495197c638234c35892befd7eca0 158 Gene3D G3DSA:3.90.280.10 1 158 1.2E-50 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM460_RS22455 4efb495197c638234c35892befd7eca0 158 SUPERFAMILY SSF49777 1 157 2.88E-52 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM460_RS22455 4efb495197c638234c35892befd7eca0 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 3.1E-58 T 29-03-2018 IPR005247 YbhB/YbcL AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF116726 148 226 1.26E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.40.50.720 233 366 6.0E-25 T 29-03-2018 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF51735 232 376 3.83E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.30.70.1450 367 458 3.4E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF51735 1 152 2.99E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.5E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.40.50.720 2 139 3.5E-27 T 29-03-2018 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02254 TrkA-N domain 3 111 5.9E-30 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02254 TrkA-N domain 235 350 3.3E-26 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.30.70.1450 140 232 1.3E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02080 TrkA-C domain 390 451 1.3E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02080 TrkA-C domain 157 225 1.6E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS06975 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF116726 390 450 1.57E-6 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.0E-84 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 PIRSF PIRSF005751 1 351 3.4E-144 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 204 3.8E-11 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 SUPERFAMILY SSF52374 145 335 3.31E-25 T 29-03-2018 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 SMART SM00764 147 333 7.7E-135 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 Gene3D G3DSA:3.40.50.620 140 338 2.0E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 342 2.5E-179 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 SUPERFAMILY SSF55729 34 116 6.45E-9 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 338 2.0E-132 T 29-03-2018 AM460_RS23295 9ae99b578fc0484dd23857f4ca6d1ee4 352 Gene3D G3DSA:3.40.630.30 7 139 4.4E-7 T 29-03-2018 AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 Pfam PF00034 Cytochrome c 340 453 2.3E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 SMART SM01235 16 155 9.3E-54 T 29-03-2018 IPR025992 Haem-binding domain AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 Gene3D G3DSA:1.10.760.10 36 165 0.0017 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 Pfam PF14376 Haem-binding domain 18 152 6.9E-34 T 29-03-2018 IPR025992 Haem-binding domain AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 SUPERFAMILY SSF46626 319 460 5.34E-40 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 Pfam PF03150 Di-haem cytochrome c peroxidase 185 332 7.5E-48 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 SUPERFAMILY SSF46626 170 320 1.35E-46 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 Gene3D G3DSA:1.10.760.10 337 463 1.7E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM460_RS05730 61a6fdcde6c89e0eb68d33462ab34988 465 Gene3D G3DSA:1.10.760.10 173 336 1.3E-43 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 ProSitePatterns PS01047 Heavy-metal-associated domain. 105 134 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Gene3D G3DSA:3.30.70.100 97 183 2.0E-21 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF56784 519 539 1.26E-58 T 29-03-2018 IPR023214 HAD-like domain AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF56784 576 824 1.26E-58 T 29-03-2018 IPR023214 HAD-like domain AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 291 795 1.3E-89 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 ProSitePatterns PS01229 Hypothetical cof family signature 2. 718 740 - T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 518 732 1.3E-49 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 718 734 6.5E-9 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 749 774 6.5E-9 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 690 706 6.5E-9 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 252 827 5.0E-184 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF81653 322 419 8.89E-25 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Pfam PF00122 E1-E2 ATPase 320 500 1.1E-51 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Pfam PF00403 Heavy-metal-associated domain 105 159 3.5E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Pfam PF00403 Heavy-metal-associated domain 8 62 2.6E-11 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Gene3D G3DSA:1.20.1110.10 283 537 8.6E-46 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF81665 420 515 1.7E-13 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF81665 286 323 1.7E-13 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF81665 767 786 1.7E-13 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Gene3D G3DSA:3.30.70.100 1 73 1.8E-15 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF55008 2 67 2.09E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 SUPERFAMILY SSF55008 101 166 3.8E-19 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Gene3D G3DSA:3.40.50.1000 645 783 3.6E-47 T 29-03-2018 IPR023214 HAD-like domain AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 Gene3D G3DSA:3.40.1110.10 538 644 3.7E-31 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 535 2.3E-26 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 654 2.3E-26 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 753 2.3E-26 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 369 383 2.3E-26 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 675 2.3E-26 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 737 2.3E-26 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 233 827 1.5E-193 T 29-03-2018 AM460_RS23905 5d106c511a80aaff5b39443953a5870b 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 523 529 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Gene3D G3DSA:3.40.50.720 550 643 3.3E-15 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 SUPERFAMILY SSF46548 394 561 3.3E-20 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 453 532 6.2E-16 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 SUPERFAMILY SSF51395 205 257 2.72E-12 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 SUPERFAMILY SSF51395 287 405 2.72E-12 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 SUPERFAMILY SSF51395 43 140 2.72E-12 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Gene3D G3DSA:3.50.50.60 693 854 1.5E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Gene3D G3DSA:3.20.20.70 43 409 6.8E-8 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1027 0.0 T 29-03-2018 IPR017701 Putative selenate reductase YgfK AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Gene3D G3DSA:3.50.50.60 644 692 3.5E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 SUPERFAMILY SSF51971 551 786 1.47E-48 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 PRINTS PR00419 Adrenodoxin reductase family signature 575 588 3.3E-16 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 PRINTS PR00419 Adrenodoxin reductase family signature 552 574 3.3E-16 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 PRINTS PR00419 Adrenodoxin reductase family signature 681 695 3.3E-16 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Gene3D G3DSA:1.10.1060.10 410 549 7.8E-25 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Gene3D G3DSA:1.10.1060.10 855 964 3.3E-10 T 29-03-2018 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 938 949 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 552 840 1.3E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09795 3e40e1148e738c5ed76ab366301b541b 1032 SUPERFAMILY SSF46548 872 963 7.85E-10 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 SUPERFAMILY SSF52467 181 342 3.1E-59 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 Gene3D G3DSA:3.40.50.970 1 186 3.5E-62 T 29-03-2018 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 Gene3D G3DSA:3.40.50.970 334 534 3.6E-50 T 29-03-2018 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 9.1E-50 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 SUPERFAMILY SSF52518 357 546 4.11E-66 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 5.3E-57 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 1.0E-42 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 3.2E-217 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 SUPERFAMILY SSF52518 1 174 4.8E-63 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS04350 cf87b5d68ec30499c91aa2074c891383 548 Gene3D G3DSA:3.40.50.1220 187 333 1.2E-48 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS10285 0898791abbc91e671cb48c247eb149ae 455 SUPERFAMILY SSF143548 16 158 6.54E-46 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM460_RS10285 0898791abbc91e671cb48c247eb149ae 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 8.0E-223 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM460_RS10285 0898791abbc91e671cb48c247eb149ae 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.5E-95 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM460_RS10285 0898791abbc91e671cb48c247eb149ae 455 Pfam PF03315 Serine dehydratase beta chain 3 155 3.6E-56 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM460_RS10285 0898791abbc91e671cb48c247eb149ae 455 Gene3D G3DSA:3.30.1330.90 10 158 2.5E-51 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM460_RS10285 0898791abbc91e671cb48c247eb149ae 455 Gene3D G3DSA:1.10.4100.10 255 445 6.0E-34 T 29-03-2018 AM460_RS11820 5f58cfaecc945e94d90219b19197c356 335 SMART SM00530 18 79 2.2E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS11820 5f58cfaecc945e94d90219b19197c356 335 SUPERFAMILY SSF47413 14 83 9.65E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS11820 5f58cfaecc945e94d90219b19197c356 335 Gene3D G3DSA:1.10.260.40 2 96 7.0E-14 T 29-03-2018 AM460_RS11820 5f58cfaecc945e94d90219b19197c356 335 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 330 45.544 T 29-03-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 AM460_RS11820 5f58cfaecc945e94d90219b19197c356 335 Pfam PF13464 Domain of unknown function (DUF4115) 253 327 2.2E-23 T 29-03-2018 IPR025194 Domain of unknown function DUF4115 AM460_RS11820 5f58cfaecc945e94d90219b19197c356 335 Pfam PF13413 Helix-turn-helix domain 18 78 6.6E-15 T 29-03-2018 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 SUPERFAMILY SSF53098 2 210 1.73E-67 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 Gene3D G3DSA:1.10.150.80 195 293 4.3E-23 T 29-03-2018 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 Pfam PF00570 HRDC domain 213 279 1.2E-14 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 Gene3D G3DSA:3.30.420.10 1 194 1.0E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 SMART SM00341 210 289 3.3E-23 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 SMART SM00474 3 171 9.0E-56 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.031 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 SUPERFAMILY SSF47819 295 372 1.96E-24 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 Pfam PF01612 3'-5' exonuclease 3 169 3.7E-47 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 TIGRFAM TIGR01388 rnd: ribonuclease D 5 372 2.0E-164 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM460_RS15985 5a8fb4eb0ea1ca816852ae207b36a136 375 SUPERFAMILY SSF47819 194 301 1.1E-29 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 SUPERFAMILY SSF53155 187 267 8.24E-21 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Gene3D G3DSA:1.10.10.10 265 351 7.0E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Gene3D G3DSA:1.10.10.60 80 137 3.7E-18 T 29-03-2018 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Gene3D G3DSA:1.10.10.60 138 180 0.15 T 29-03-2018 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 SUPERFAMILY SSF46767 268 348 1.29E-30 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 SMART SM00342 99 181 6.4E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 4.5E-32 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Pfam PF12833 Helix-turn-helix domain 105 181 3.1E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 SUPERFAMILY SSF46689 85 133 1.34E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Gene3D G3DSA:3.30.160.70 181 264 7.8E-20 T 29-03-2018 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Gene3D G3DSA:3.40.10.10 1 77 6.1E-28 T 29-03-2018 IPR035451 Ada-like domain AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 177 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Pfam PF02805 Metal binding domain of Ada 11 75 8.6E-32 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 266 1.9E-21 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 86 128 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 1.2E-37 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 SUPERFAMILY SSF57884 1 92 2.35E-34 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM460_RS13265 9c31cc0b28d42372dbdeb16ab1b83d9e 354 PIRSF PIRSF000409 1 354 1.0E-145 T 29-03-2018 IPR016221 Bifunctional regulatory protein Ada AM460_RS02370 ed97bda1e25dac2e0837706ae13d09cb 144 Pfam PF00583 Acetyltransferase (GNAT) family 24 133 3.3E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS02370 ed97bda1e25dac2e0837706ae13d09cb 144 Gene3D G3DSA:3.40.630.30 1 142 6.7E-24 T 29-03-2018 AM460_RS02370 ed97bda1e25dac2e0837706ae13d09cb 144 SUPERFAMILY SSF55729 6 137 6.08E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS05380 f1686d3f65e84fbe44ab9c4b33f7cd5f 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 89.058 T 29-03-2018 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.13+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 AM460_RS05380 f1686d3f65e84fbe44ab9c4b33f7cd5f 332 Gene3D G3DSA:3.30.1370.60 71 303 6.8E-67 T 29-03-2018 AM460_RS05380 f1686d3f65e84fbe44ab9c4b33f7cd5f 332 SUPERFAMILY SSF89733 1 332 7.32E-95 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS05380 f1686d3f65e84fbe44ab9c4b33f7cd5f 332 Gene3D G3DSA:1.10.1530.10 3 70 1.1E-19 T 29-03-2018 AM460_RS05380 f1686d3f65e84fbe44ab9c4b33f7cd5f 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 330 3.4E-103 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 SMART SM00936 282 373 1.6E-26 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 1.8E-20 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 SUPERFAMILY SSF69189 282 375 1.28E-21 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 Gene3D G3DSA:3.40.710.10 20 283 1.5E-49 T 29-03-2018 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 262 2.8E-99 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.8E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.8E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.8E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS14250 952ba8bae94c9324a574530207a82307 388 SUPERFAMILY SSF56601 4 282 1.84E-76 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS14250 952ba8bae94c9324a574530207a82307 388 Gene3D G3DSA:2.60.410.10 284 373 1.2E-18 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS13365 f1802769da8c9cc2c67c3a32eecbac06 350 Gene3D G3DSA:1.25.40.10 256 348 3.8E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS13365 f1802769da8c9cc2c67c3a32eecbac06 350 Pfam PF03918 Cytochrome C biogenesis protein 7 129 1.1E-50 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AM460_RS13365 f1802769da8c9cc2c67c3a32eecbac06 350 Gene3D G3DSA:1.25.40.10 152 255 4.1E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS13365 f1802769da8c9cc2c67c3a32eecbac06 350 Pfam PF14559 Tetratricopeptide repeat 233 298 1.9E-5 T 29-03-2018 AM460_RS13365 f1802769da8c9cc2c67c3a32eecbac06 350 SUPERFAMILY SSF48452 218 327 2.04E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS09430 6e54240b246735d5a285824d43665226 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.1E-43 T 29-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 PIRSF PIRSF000497 1 382 3.0E-176 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.288 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.3E-45 T 29-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.5E-201 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 233 382 9.03E-72 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 6.3E-70 T 29-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 134 233 1.8E-43 T 29-03-2018 AM460_RS09430 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS09430 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 11 133 1.3E-44 T 29-03-2018 AM460_RS09430 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 246 383 4.1E-50 T 29-03-2018 AM460_RS09430 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 112 232 7.46E-52 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM460_RS18840 ce1b2f23645ff09545704e6128b72399 543 PIRSF PIRSF002741 1 543 2.7E-111 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS18840 ce1b2f23645ff09545704e6128b72399 543 Gene3D G3DSA:3.10.105.10 312 512 1.2E-55 T 29-03-2018 AM460_RS18840 ce1b2f23645ff09545704e6128b72399 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM460_RS18840 ce1b2f23645ff09545704e6128b72399 543 Gene3D G3DSA:3.40.190.10 176 311 5.2E-37 T 29-03-2018 AM460_RS18840 ce1b2f23645ff09545704e6128b72399 543 SUPERFAMILY SSF53850 35 525 1.14E-146 T 29-03-2018 AM460_RS18840 ce1b2f23645ff09545704e6128b72399 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 4.2E-88 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS18840 ce1b2f23645ff09545704e6128b72399 543 Gene3D G3DSA:3.90.76.10 63 175 6.9E-35 T 29-03-2018 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 6.2E-131 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 9.1E-176 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 2.2E-29 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF50800 74 168 1.74E-24 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 Gene3D G3DSA:3.40.1380.20 328 480 3.7E-42 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 Gene3D G3DSA:3.20.20.60 6 172 8.4E-35 T 29-03-2018 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 Gene3D G3DSA:3.20.20.60 173 327 6.7E-54 T 29-03-2018 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF52935 329 479 2.35E-39 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF51621 3 78 1.92E-86 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF51621 160 345 1.92E-86 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 4.7E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 4.7E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.7E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 4.7E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 4.7E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 4.7E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS15710 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.7E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:1.10.8.50 1 66 5.5E-20 T 29-03-2018 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.4E-34 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:4.10.910.10 85 118 1.9E-26 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 SUPERFAMILY SSF46946 2 114 4.71E-45 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.8E-52 T 29-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 29-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.319 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 PIRSF PIRSF002134 1 118 6.1E-41 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06930 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:4.10.910.10 67 84 4.4E-18 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS09520 7dd7bc8d5b29efd3f99b99eab0ce557d 225 Pfam PF00005 ABC transporter 30 170 7.3E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS09520 7dd7bc8d5b29efd3f99b99eab0ce557d 225 Gene3D G3DSA:3.40.50.300 24 223 6.2E-37 T 29-03-2018 AM460_RS09520 7dd7bc8d5b29efd3f99b99eab0ce557d 225 SUPERFAMILY SSF52540 24 221 1.31E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS09520 7dd7bc8d5b29efd3f99b99eab0ce557d 225 SMART SM00382 27 210 3.6E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 239 5.6E-102 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 Gene3D G3DSA:3.40.50.1000 2 36 0.016 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 Gene3D G3DSA:1.10.150.240 37 98 9.6E-22 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 1.8E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 1.8E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.8E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 1.8E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 209 1.2E-36 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 204 1.8E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 240 36.678 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 Gene3D G3DSA:3.40.50.1000 99 247 7.7E-38 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 SUPERFAMILY SSF56784 2 239 1.15E-59 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06500 32bab1e9795cff60e119707766f1b872 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 209 4.9E-15 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS02030 fb99945bbd39aeb1b88eecfbf4c690ce 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 8.5E-161 T 29-03-2018 IPR022462 Lysine-2,3-aminomutase-like AM460_RS02030 fb99945bbd39aeb1b88eecfbf4c690ce 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 6.5E-157 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM460_RS02030 fb99945bbd39aeb1b88eecfbf4c690ce 342 Gene3D G3DSA:3.20.20.70 101 330 8.1E-21 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS02030 fb99945bbd39aeb1b88eecfbf4c690ce 342 PIRSF PIRSF004911 1 342 2.9E-125 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM460_RS02030 fb99945bbd39aeb1b88eecfbf4c690ce 342 Pfam PF04055 Radical SAM superfamily 118 265 7.7E-9 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS02030 fb99945bbd39aeb1b88eecfbf4c690ce 342 Pfam PF13353 4Fe-4S single cluster domain 112 176 1.8E-5 T 29-03-2018 AM460_RS02030 fb99945bbd39aeb1b88eecfbf4c690ce 342 SUPERFAMILY SSF102114 102 324 1.96E-26 T 29-03-2018 AM460_RS05865 7bc94d28d9c88ad66bb9ce22b5d40df4 141 SUPERFAMILY SSF52833 3 137 9.7E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS05865 7bc94d28d9c88ad66bb9ce22b5d40df4 141 Pfam PF03960 ArsC family 7 115 4.8E-20 T 29-03-2018 IPR006660 Arsenate reductase-like AM460_RS05865 7bc94d28d9c88ad66bb9ce22b5d40df4 141 Gene3D G3DSA:3.40.30.10 1 141 5.3E-45 T 29-03-2018 AM460_RS05865 7bc94d28d9c88ad66bb9ce22b5d40df4 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 1.9E-40 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM460_RS08005 00375183539afbde28c739288cf854a7 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 311 4.8E-121 T 29-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AM460_RS08005 00375183539afbde28c739288cf854a7 321 Pfam PF03741 Integral membrane protein TerC family 80 282 8.7E-57 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 SUPERFAMILY SSF46548 282 392 9.59E-19 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Pfam PF11870 Domain of unknown function (DUF3390) 386 468 4.2E-11 T 29-03-2018 IPR024569 4Fe-4S binding protein, C-terminal AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 SUPERFAMILY SSF100950 65 89 2.13E-40 T 29-03-2018 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 SUPERFAMILY SSF100950 135 295 2.13E-40 T 29-03-2018 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 453 8.6E-235 T 29-03-2018 IPR004452 4Fe-4S binding protein GO:0019516 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Pfam PF13183 4Fe-4S dicluster domain 309 376 1.4E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Pfam PF02589 LUD domain 72 294 2.9E-55 T 29-03-2018 IPR003741 LUD domain AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Gene3D G3DSA:3.40.50.10420 138 293 1.6E-45 T 29-03-2018 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Gene3D G3DSA:3.40.50.10420 63 137 6.0E-8 T 29-03-2018 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Gene3D G3DSA:3.30.70.20 362 386 0.18 T 29-03-2018 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Gene3D G3DSA:3.30.70.20 320 361 1.7E-7 T 29-03-2018 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 Gene3D G3DSA:3.30.70.20 294 319 0.0054 T 29-03-2018 AM460_RS24835 16da49a4374d394770e5347a35a510d3 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS06935 4787f9523b6ef03d3642ec5730a0ceb5 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.678 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM460_RS06935 4787f9523b6ef03d3642ec5730a0ceb5 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 29-03-2018 IPR018102 Ribosomal S11, conserved site AM460_RS06935 4787f9523b6ef03d3642ec5730a0ceb5 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.7E-55 T 29-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06935 4787f9523b6ef03d3642ec5730a0ceb5 129 SUPERFAMILY SSF53137 14 129 4.77E-48 T 29-03-2018 AM460_RS06935 4787f9523b6ef03d3642ec5730a0ceb5 129 Pfam PF00411 Ribosomal protein S11 19 128 2.9E-54 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM460_RS06935 4787f9523b6ef03d3642ec5730a0ceb5 129 PIRSF PIRSF002131 1 129 9.0E-53 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM460_RS06935 4787f9523b6ef03d3642ec5730a0ceb5 129 Gene3D G3DSA:3.30.420.80 5 129 2.0E-44 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 4.1E-116 T 29-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 2.4E-57 T 29-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 6.9E-206 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 29-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 Gene3D G3DSA:3.30.360.10 188 490 4.2E-126 T 29-03-2018 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 PIRSF PIRSF000110 1 491 8.6E-180 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.991 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 Gene3D G3DSA:3.40.50.720 7 187 3.1E-61 T 29-03-2018 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 8.6E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 8.6E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 8.6E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 8.6E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 8.6E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 SUPERFAMILY SSF55347 176 488 4.25E-113 T 29-03-2018 AM460_RS15720 2adc85c04e205bb322f6838caacfc474 491 SUPERFAMILY SSF51735 4 189 4.53E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16810 fa5c17838c0a78b7fff2418d71c1f464 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM460_RS16810 fa5c17838c0a78b7fff2418d71c1f464 135 Gene3D G3DSA:3.10.180.10 1 135 1.3E-36 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS16810 fa5c17838c0a78b7fff2418d71c1f464 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM460_RS16810 fa5c17838c0a78b7fff2418d71c1f464 135 SUPERFAMILY SSF54593 1 130 2.69E-34 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS16810 fa5c17838c0a78b7fff2418d71c1f464 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.3E-69 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM460_RS16810 fa5c17838c0a78b7fff2418d71c1f464 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 9.3E-25 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM460_RS27395 74d03cb3446c8616cf28c556bd8feb93 153 SMART SM00318 19 140 9.3E-49 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM460_RS27395 74d03cb3446c8616cf28c556bd8feb93 153 SUPERFAMILY SSF50199 15 147 3.01E-38 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM460_RS27395 74d03cb3446c8616cf28c556bd8feb93 153 Pfam PF00565 Staphylococcal nuclease homologue 44 140 6.6E-27 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM460_RS27395 74d03cb3446c8616cf28c556bd8feb93 153 ProSitePatterns PS01123 Thermonuclease family signature 1. 30 54 - T 29-03-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 AM460_RS27395 74d03cb3446c8616cf28c556bd8feb93 153 Gene3D G3DSA:2.40.50.90 17 144 2.3E-32 T 29-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain AM460_RS27395 74d03cb3446c8616cf28c556bd8feb93 153 ProSitePatterns PS01284 Thermonuclease family signature 2. 84 94 - T 29-03-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 AM460_RS16150 21d4083fa80363c994703e6c93431a79 452 SUPERFAMILY SSF103473 9 449 2.22E-66 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS16150 21d4083fa80363c994703e6c93431a79 452 Pfam PF00083 Sugar (and other) transporter 55 451 1.9E-36 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS16150 21d4083fa80363c994703e6c93431a79 452 Gene3D G3DSA:1.20.1250.20 238 452 6.9E-25 T 29-03-2018 AM460_RS16150 21d4083fa80363c994703e6c93431a79 452 Gene3D G3DSA:1.20.1250.20 9 231 2.9E-26 T 29-03-2018 AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 Gene3D G3DSA:3.40.50.300 261 503 1.4E-37 T 29-03-2018 AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 SMART SM00382 287 480 5.5E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 SMART SM00382 35 226 2.6E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 Pfam PF00005 ABC transporter 278 432 5.3E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 Pfam PF00005 ABC transporter 26 178 5.2E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 SUPERFAMILY SSF52540 17 229 8.95E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 SUPERFAMILY SSF52540 273 483 1.04E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 Gene3D G3DSA:3.40.50.300 3 239 5.5E-47 T 29-03-2018 AM460_RS11675 10e580c30a8b78b07722c1b056202c49 509 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS00450 da7129c5bd7902400d6a29dd517ed005 176 Gene3D G3DSA:1.20.5.170 1 87 8.2E-10 T 29-03-2018 AM460_RS00450 da7129c5bd7902400d6a29dd517ed005 176 SUPERFAMILY SSF161266 19 170 1.27E-45 T 29-03-2018 AM460_RS00450 da7129c5bd7902400d6a29dd517ed005 176 Pfam PF07352 Bacteriophage Mu Gam like protein 24 169 3.7E-40 T 29-03-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 AM460_RS12500 58e8d45fb9ce6319980f596a092eacad 512 Gene3D G3DSA:1.20.1250.20 12 204 4.7E-34 T 29-03-2018 AM460_RS12500 58e8d45fb9ce6319980f596a092eacad 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 502 9.7E-172 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM460_RS12500 58e8d45fb9ce6319980f596a092eacad 512 Gene3D G3DSA:1.20.1250.20 259 509 2.2E-25 T 29-03-2018 AM460_RS12500 58e8d45fb9ce6319980f596a092eacad 512 Pfam PF07690 Major Facilitator Superfamily 23 417 1.2E-51 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS12500 58e8d45fb9ce6319980f596a092eacad 512 SUPERFAMILY SSF103473 479 504 7.06E-69 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS12500 58e8d45fb9ce6319980f596a092eacad 512 SUPERFAMILY SSF103473 255 427 7.06E-69 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS12500 58e8d45fb9ce6319980f596a092eacad 512 SUPERFAMILY SSF103473 7 197 7.06E-69 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS24335 71affcd52404a53dba2f3b6f1bfef285 110 SMART SM01323 19 102 4.0E-37 T 29-03-2018 IPR003849 Preprotein translocase YajC AM460_RS24335 71affcd52404a53dba2f3b6f1bfef285 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 3.0E-35 T 29-03-2018 IPR003849 Preprotein translocase YajC AM460_RS24335 71affcd52404a53dba2f3b6f1bfef285 110 Pfam PF02699 Preprotein translocase subunit 22 99 1.5E-26 T 29-03-2018 IPR003849 Preprotein translocase YajC AM460_RS24335 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 29-03-2018 IPR003849 Preprotein translocase YajC AM460_RS24335 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 29-03-2018 IPR003849 Preprotein translocase YajC AM460_RS20945 df0a24832e1ec86e3a3e5c2eea54c276 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 326 40.357 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM460_RS20945 df0a24832e1ec86e3a3e5c2eea54c276 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 2.3E-111 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM460_RS20945 df0a24832e1ec86e3a3e5c2eea54c276 328 SUPERFAMILY SSF52540 46 164 1.79E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20945 df0a24832e1ec86e3a3e5c2eea54c276 328 Gene3D G3DSA:3.40.50.300 33 285 8.0E-9 T 29-03-2018 AM460_RS20945 df0a24832e1ec86e3a3e5c2eea54c276 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 9.9E-124 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM460_RS13470 0f1ca6d393fad43a774b0a4616d818f6 237 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 1 233 41.743 T 29-03-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 AM460_RS13470 0f1ca6d393fad43a774b0a4616d818f6 237 SUPERFAMILY SSF48317 2 226 2.29E-35 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS13470 0f1ca6d393fad43a774b0a4616d818f6 237 SMART SM00014 94 210 5.1E-22 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS13470 0f1ca6d393fad43a774b0a4616d818f6 237 Gene3D G3DSA:1.20.144.10 9 224 1.3E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS13470 0f1ca6d393fad43a774b0a4616d818f6 237 Pfam PF01569 PAP2 superfamily 135 207 5.3E-9 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS25930 38cfa5b54084d0efef9b7d2d81305e46 355 Gene3D G3DSA:3.40.50.2000 179 347 4.9E-31 T 29-03-2018 AM460_RS25930 38cfa5b54084d0efef9b7d2d81305e46 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 344 6.8E-38 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM460_RS25930 38cfa5b54084d0efef9b7d2d81305e46 355 Gene3D G3DSA:3.40.50.2000 1 178 1.1E-44 T 29-03-2018 AM460_RS25930 38cfa5b54084d0efef9b7d2d81305e46 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.001 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25930 38cfa5b54084d0efef9b7d2d81305e46 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 347 5.0E-114 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25930 38cfa5b54084d0efef9b7d2d81305e46 355 SUPERFAMILY SSF53756 6 353 5.54E-131 T 29-03-2018 AM460_RS25930 38cfa5b54084d0efef9b7d2d81305e46 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.5E-49 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS23815 eb5f85eb803c9efe326669e7287fd60b 368 SUPERFAMILY SSF52821 9 66 2.74E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS23815 eb5f85eb803c9efe326669e7287fd60b 368 SUPERFAMILY SSF52821 94 134 2.74E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS23815 eb5f85eb803c9efe326669e7287fd60b 368 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 349 1.6E-105 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM460_RS23815 eb5f85eb803c9efe326669e7287fd60b 368 SMART SM00450 4 134 4.1E-14 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS23815 eb5f85eb803c9efe326669e7287fd60b 368 Gene3D G3DSA:3.40.50.300 141 359 4.9E-4 T 29-03-2018 AM460_RS23815 eb5f85eb803c9efe326669e7287fd60b 368 Gene3D G3DSA:3.40.250.10 2 140 1.8E-17 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS23815 eb5f85eb803c9efe326669e7287fd60b 368 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 364 49.639 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.30.300.10 401 525 2.6E-53 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.3E-44 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.4E-85 T 29-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.40.50.880 5 221 1.2E-48 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.678 T 29-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF52402 197 420 3.97E-59 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.40.50.620 222 400 4.3E-36 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF52317 5 204 9.01E-59 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 2.0E-156 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 8.1E-42 T 29-03-2018 IPR017926 Glutamine amidotransferase AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF54810 405 525 1.44E-51 T 29-03-2018 AM460_RS11880 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF02540 NAD synthase 223 257 1.2E-6 T 29-03-2018 IPR022310 NAD/GMP synthase AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 SUPERFAMILY SSF52317 153 378 1.28E-64 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.802 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 Gene3D G3DSA:3.40.50.880 152 379 5.1E-70 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 SUPERFAMILY SSF52021 3 143 2.09E-57 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.5E-40 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.5E-40 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.5E-40 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.5E-40 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.5E-40 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 3.2E-153 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.9E-50 T 29-03-2018 IPR017926 Glutamine amidotransferase AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 SMART SM01097 3 133 2.9E-91 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 Gene3D G3DSA:3.50.30.20 2 151 1.5E-63 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.5E-52 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 29-03-2018 AM460_RS26255 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 29-03-2018 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 PIRSF PIRSF005784 3 191 1.2E-84 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 Pfam PF04060 Putative Fe-S cluster 44 76 1.4E-12 T 29-03-2018 IPR007202 4Fe-4S domain GO:0051536 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 Gene3D G3DSA:3.30.70.20 148 180 8.9E-6 T 29-03-2018 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 Gene3D G3DSA:3.30.70.20 127 147 2.7E-12 T 29-03-2018 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 1.0E-16 T 29-03-2018 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 Gene3D G3DSA:3.30.70.20 24 126 2.3E-11 T 29-03-2018 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.313 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 1.7E-88 T 29-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AM460_RS16930 b285e066cea9793adc11a09b5caa92f1 192 SUPERFAMILY SSF54862 38 174 6.35E-29 T 29-03-2018 AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 PRINTS PR00969 Pili chaperone signature 20 29 5.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 PRINTS PR00969 Pili chaperone signature 69 90 5.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 PRINTS PR00969 Pili chaperone signature 158 173 5.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 PRINTS PR00969 Pili chaperone signature 97 114 5.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 PRINTS PR00969 Pili chaperone signature 123 138 5.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 Gene3D G3DSA:2.60.40.10 19 142 1.4E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 3.5E-9 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 Gene3D G3DSA:2.60.40.10 144 223 2.2E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 SUPERFAMILY SSF49584 136 221 1.31E-16 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 19 141 3.4E-41 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS13835 84da920a7c9ed3059bb4572dd07772f5 224 SUPERFAMILY SSF49354 15 141 3.66E-39 T 29-03-2018 IPR008962 PapD-like AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 8.5E-23 T 29-03-2018 IPR023214 HAD-like domain AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 SUPERFAMILY SSF56784 3 198 3.61E-42 T 29-03-2018 IPR023214 HAD-like domain AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 Gene3D G3DSA:3.40.50.1000 84 214 1.4E-18 T 29-03-2018 IPR023214 HAD-like domain AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 4 190 2.7E-68 T 29-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 Gene3D G3DSA:1.10.150.240 16 83 2.5E-20 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 3.7E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.7E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 3.7E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 190 6.0E-19 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS18050 8986e3128e2fbdc41ca06bf39a51b2cc 219 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 3 191 2.3E-81 T 29-03-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 SUPERFAMILY SSF56801 9 517 1.44E-134 T 29-03-2018 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 Gene3D G3DSA:3.30.300.30 421 517 1.4E-22 T 29-03-2018 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 Pfam PF00501 AMP-binding enzyme 17 426 2.7E-89 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 Gene3D G3DSA:3.40.50.980 6 183 8.7E-40 T 29-03-2018 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 Gene3D G3DSA:2.30.38.10 335 419 3.3E-22 T 29-03-2018 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 Hamap MF_01524 Probable crotonobetaine/carnitine-CoA ligase [caiC]. 1 517 85.901 T 29-03-2018 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC GO:0009437|GO:0016878|GO:0051108|GO:0051109 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 Gene3D G3DSA:3.40.50.980 184 334 4.7E-35 T 29-03-2018 AM460_RS26225 fba49e61d64a7e9fb0742d416e982202 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 510 3.6E-15 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS08360 5fb68503b231cac3ce001b75f2b74d3b 713 SUPERFAMILY SSF56935 36 713 2.49E-127 T 29-03-2018 AM460_RS08360 5fb68503b231cac3ce001b75f2b74d3b 713 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 696 713 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS08360 5fb68503b231cac3ce001b75f2b74d3b 713 Gene3D G3DSA:2.40.170.20 177 713 3.4E-88 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS08360 5fb68503b231cac3ce001b75f2b74d3b 713 Gene3D G3DSA:2.170.130.10 29 176 6.1E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS08360 5fb68503b231cac3ce001b75f2b74d3b 713 Pfam PF00593 TonB dependent receptor 242 711 5.5E-64 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS08360 5fb68503b231cac3ce001b75f2b74d3b 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 6.4E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS08360 5fb68503b231cac3ce001b75f2b74d3b 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 713 4.0E-112 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS06790 ca1cacd94c612610f66c81f0ab65810f 493 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 25 484 2.2E-196 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AM460_RS06790 ca1cacd94c612610f66c81f0ab65810f 493 SUPERFAMILY SSF52540 94 484 3.54E-105 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06790 ca1cacd94c612610f66c81f0ab65810f 493 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 308 322 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM460_RS06790 ca1cacd94c612610f66c81f0ab65810f 493 SMART SM00382 241 383 5.0E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06790 ca1cacd94c612610f66c81f0ab65810f 493 Pfam PF00437 Type II/IV secretion system protein 114 380 6.9E-92 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM460_RS06790 ca1cacd94c612610f66c81f0ab65810f 493 Gene3D G3DSA:3.30.450.90 73 213 2.6E-47 T 29-03-2018 AM460_RS06790 ca1cacd94c612610f66c81f0ab65810f 493 Gene3D G3DSA:3.40.50.300 214 492 3.7E-63 T 29-03-2018 AM460_RS24705 b3664ba010138f2212e85c0a2921b627 515 SUPERFAMILY SSF52210 349 507 1.2E-7 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS24705 b3664ba010138f2212e85c0a2921b627 515 Gene3D G3DSA:3.40.50.261 167 515 3.6E-35 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS24705 b3664ba010138f2212e85c0a2921b627 515 Pfam PF02629 CoA binding domain 189 283 3.1E-15 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS24705 b3664ba010138f2212e85c0a2921b627 515 SUPERFAMILY SSF52210 180 288 5.49E-20 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS24705 b3664ba010138f2212e85c0a2921b627 515 Pfam PF00549 CoA-ligase 346 503 3.3E-46 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS24705 b3664ba010138f2212e85c0a2921b627 515 Gene3D G3DSA:3.40.50.720 71 166 1.7E-5 T 29-03-2018 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 Gene3D G3DSA:1.10.10.60 6 44 8.3E-15 T 29-03-2018 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 Gene3D G3DSA:1.10.260.40 45 66 5.0E-6 T 29-03-2018 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 87 192 2.9E-28 T 29-03-2018 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.7E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 Gene3D G3DSA:1.10.357.10 67 195 1.9E-10 T 29-03-2018 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 SUPERFAMILY SSF48498 87 190 4.23E-16 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 6.2E-79 T 29-03-2018 IPR017757 Transcriptional repressor BetI AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 195 102.221 T 29-03-2018 IPR017757 Transcriptional repressor BetI AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.3E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.3E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS24765 1fb8624e341137b84c2bea0200350672 195 SUPERFAMILY SSF46689 6 79 3.75E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 SUPERFAMILY SSF53850 89 294 1.39E-31 T 29-03-2018 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 Gene3D G3DSA:3.40.190.10 87 173 5.2E-19 T 29-03-2018 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.5E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 SUPERFAMILY SSF46785 1 111 6.52E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 Gene3D G3DSA:1.10.10.10 1 83 1.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.2E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.2E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.2E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 Gene3D G3DSA:3.40.190.10 174 266 9.1E-11 T 29-03-2018 AM460_RS04325 ae2c77a5247caf6923185dd05d8806c4 296 Pfam PF03466 LysR substrate binding domain 89 293 5.0E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 6.5E-58 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.552 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.1E-41 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.1E-41 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.1E-41 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.1E-41 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 1.4E-71 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 SUPERFAMILY SSF54611 10 142 1.2E-53 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS05205 82d218d455a27c5acdf11662265cd47e 155 Gene3D G3DSA:3.10.420.10 1 153 2.3E-56 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM460_RS03840 9062fe6cf283187c0c37942d78b3bc1c 181 SUPERFAMILY SSF52218 2 172 2.17E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS03840 9062fe6cf283187c0c37942d78b3bc1c 181 Gene3D G3DSA:3.40.50.360 2 174 9.6E-20 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS03840 9062fe6cf283187c0c37942d78b3bc1c 181 Pfam PF12724 Flavodoxin domain 4 152 3.6E-53 T 29-03-2018 IPR026816 Flavodoxin domain AM460_RS03840 9062fe6cf283187c0c37942d78b3bc1c 181 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 Gene3D G3DSA:3.40.50.150 24 292 1.9E-30 T 29-03-2018 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 30 46 2.3E-9 T 29-03-2018 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 137 149 2.3E-9 T 29-03-2018 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 60 74 2.3E-9 T 29-03-2018 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 197 221 2.3E-9 T 29-03-2018 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 SUPERFAMILY SSF53335 19 154 1.42E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 SUPERFAMILY SSF53335 184 291 1.42E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 Gene3D G3DSA:3.90.220.10 318 480 4.5E-8 T 29-03-2018 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 TIGRFAM TIGR02987 met_A_Alw26: type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family 27 545 1.4E-199 T 29-03-2018 IPR014329 M6 adenine DNA methyltransferase, Alw26I AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 Pfam PF02384 N-6 DNA Methylase 20 149 7.8E-7 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM460_RS00960 b7cee5d8b15d9ca7b3bff19d39e29e8a 546 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 140 146 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS10180 5ddc385610a04fea2089be2aa6573a2b 166 PIRSF PIRSF028301 1 166 5.1E-54 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM460_RS10180 5ddc385610a04fea2089be2aa6573a2b 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 3.7E-52 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM460_RS10180 5ddc385610a04fea2089be2aa6573a2b 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 1.3E-48 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 PRINTS PR00412 Epoxide hydrolase signature 124 137 3.9E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 PRINTS PR00412 Epoxide hydrolase signature 262 284 3.9E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 PRINTS PR00412 Epoxide hydrolase signature 65 80 3.9E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 SUPERFAMILY SSF53474 22 286 3.19E-60 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 Gene3D G3DSA:3.40.50.1820 6 288 2.6E-55 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 Hamap MF_01654 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase [mhpC]. 2 287 71.086 T 29-03-2018 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase GO:0005737|GO:0016787|GO:0018771|GO:0019439|GO:0042803 KEGG: 00360+3.7.1.14|MetaCyc: PWY-6690 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 2.6E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 2.6E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 2.6E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 2.6E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS24590 0aaec787bbd8d8183720c5859804aaed 288 Pfam PF00561 alpha/beta hydrolase fold 38 273 3.6E-21 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS21590 eccd7e5c401655d022391c5af0750764 80 Pfam PF15946 Domain of unknown function (DUF4754) 1 80 2.1E-54 T 29-03-2018 IPR031860 Protein of unknown function DUF4754 AM460_RS24000 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Gene3D G3DSA:3.30.1310.10 1 109 4.6E-46 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM460_RS24000 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 1.8E-35 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM460_RS24000 a7c2dce10c2ff34d22b8aa674aa75c8c 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.3E-42 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM460_RS24000 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.604 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM460_RS24000 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PIRSF PIRSF004555 3 109 1.8E-39 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM460_RS24000 a7c2dce10c2ff34d22b8aa674aa75c8c 109 SUPERFAMILY SSF82607 11 103 1.44E-36 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM460_RS16505 4ff96fba3c38492cef054a89021fa03e 348 Gene3D G3DSA:3.20.20.70 7 348 3.4E-121 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS16505 4ff96fba3c38492cef054a89021fa03e 348 SUPERFAMILY SSF51569 7 347 4.29E-132 T 29-03-2018 AM460_RS16505 4ff96fba3c38492cef054a89021fa03e 348 Pfam PF00793 DAHP synthetase I family 43 336 7.1E-110 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS16505 4ff96fba3c38492cef054a89021fa03e 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.5E-177 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM460_RS16505 4ff96fba3c38492cef054a89021fa03e 348 PIRSF PIRSF001361 1 348 2.4E-158 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 61.255 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.9E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 Gene3D G3DSA:3.40.50.10730 153 303 9.7E-27 T 29-03-2018 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 SUPERFAMILY SSF51735 141 305 3.54E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.3E-31 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 SMART SM00829 12 338 1.2E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 4.4E-192 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 SUPERFAMILY SSF50129 1 173 2.28E-54 T 29-03-2018 IPR011032 GroES-like AM460_RS05165 d31d2d8b5b0365e46970ac3f7e0075ff 341 Gene3D G3DSA:3.90.180.10 1 152 2.8E-46 T 29-03-2018 AM460_RS00440 2e220e99a1ee951e454fa4e76b4b9f7a 388 SMART SM00382 143 300 0.0014 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00440 2e220e99a1ee951e454fa4e76b4b9f7a 388 SUPERFAMILY SSF52540 128 341 1.59E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00440 2e220e99a1ee951e454fa4e76b4b9f7a 388 Pfam PF13401 AAA domain 142 284 7.5E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00440 2e220e99a1ee951e454fa4e76b4b9f7a 388 Gene3D G3DSA:3.40.50.300 112 375 5.5E-10 T 29-03-2018 AM460_RS00440 2e220e99a1ee951e454fa4e76b4b9f7a 388 Gene3D G3DSA:1.10.260.40 2 67 0.0024 T 29-03-2018 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 373 385 1.1E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 256 272 1.1E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 SUPERFAMILY SSF53092 4 177 6.28E-54 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 Pfam PF00557 Metallopeptidase family M24 185 414 1.2E-65 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 SMART SM01011 4 139 5.2E-59 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 SUPERFAMILY SSF55920 178 436 2.75E-89 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 Gene3D G3DSA:3.90.230.10 175 441 1.1E-89 T 29-03-2018 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 Gene3D G3DSA:3.40.350.10 2 174 6.2E-50 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 129 1.0E-36 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM460_RS09645 ca7aadca4dda04f88d5c927482dce325 441 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 351 363 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM460_RS06330 b9de8ccc9a8a34db920aac70bf9fcea6 227 TIGRFAM TIGR00201 comF: comF family protein 23 225 5.7E-81 T 29-03-2018 IPR005222 Competence protein ComF AM460_RS06330 b9de8ccc9a8a34db920aac70bf9fcea6 227 Pfam PF00156 Phosphoribosyl transferase domain 173 224 3.2E-8 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM460_RS06330 b9de8ccc9a8a34db920aac70bf9fcea6 227 SUPERFAMILY SSF53271 45 225 4.33E-36 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS06330 b9de8ccc9a8a34db920aac70bf9fcea6 227 Gene3D G3DSA:3.40.50.2020 57 227 3.3E-26 T 29-03-2018 AM460_RS18715 86ac95a4b1a462ad8f875798c231deca 238 Pfam PF00717 Peptidase S24-like 146 222 1.6E-7 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS18715 86ac95a4b1a462ad8f875798c231deca 238 Pfam PF01381 Helix-turn-helix 23 77 1.6E-16 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS18715 86ac95a4b1a462ad8f875798c231deca 238 SUPERFAMILY SSF47413 15 83 7.59E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS18715 86ac95a4b1a462ad8f875798c231deca 238 Gene3D G3DSA:1.10.3100.10 14 103 6.9E-20 T 29-03-2018 IPR027910 YdiL-like domain AM460_RS18715 86ac95a4b1a462ad8f875798c231deca 238 SUPERFAMILY SSF51306 140 233 2.79E-16 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS18715 86ac95a4b1a462ad8f875798c231deca 238 Gene3D G3DSA:2.10.109.10 104 234 9.0E-11 T 29-03-2018 AM460_RS18715 86ac95a4b1a462ad8f875798c231deca 238 SMART SM00530 22 77 3.0E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Gene3D G3DSA:3.40.1160.10 1 283 4.3E-63 T 29-03-2018 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 SUPERFAMILY SSF55021 297 393 7.85E-17 T 29-03-2018 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Pfam PF00696 Amino acid kinase family 4 277 9.0E-48 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Pfam PF01842 ACT domain 323 378 2.2E-6 T 29-03-2018 IPR002912 ACT domain AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Gene3D G3DSA:3.30.70.260 284 365 5.7E-20 T 29-03-2018 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 PIRSF PIRSF000726 2 449 1.3E-167 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 SUPERFAMILY SSF55021 372 448 2.46E-13 T 29-03-2018 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 2.8E-139 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 448 2.9E-153 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Gene3D G3DSA:3.30.70.260 372 449 1.4E-13 T 29-03-2018 AM460_RS02875 5ec46a150b2d0ad6c1b0436e8095f9e3 449 SUPERFAMILY SSF53633 4 292 5.37E-76 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.9E-59 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 Gene3D G3DSA:3.90.1170.10 1 136 4.0E-50 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.8E-47 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 SUPERFAMILY SSF54686 3 133 9.16E-55 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM460_RS06855 159e6ede332e7763b3b56f0b925339f5 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.018 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06050 5a422db384aafff6e9de57f0759b81fb 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.938 T 29-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AM460_RS06050 5a422db384aafff6e9de57f0759b81fb 81 Pfam PF01206 Sulfurtransferase TusA 10 79 2.2E-25 T 29-03-2018 IPR001455 TusA-like domain AM460_RS06050 5a422db384aafff6e9de57f0759b81fb 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 29-03-2018 IPR001455 TusA-like domain AM460_RS06050 5a422db384aafff6e9de57f0759b81fb 81 Gene3D G3DSA:3.30.110.40 2 80 5.5E-29 T 29-03-2018 IPR001455 TusA-like domain AM460_RS06050 5a422db384aafff6e9de57f0759b81fb 81 SUPERFAMILY SSF64307 5 80 9.03E-28 T 29-03-2018 IPR001455 TusA-like domain AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 Gene3D G3DSA:3.30.565.10 303 472 3.2E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 3.8E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.8E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.8E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 3.8E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 Gene3D G3DSA:1.10.287.130 239 302 6.5E-14 T 29-03-2018 AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 SMART SM00387 360 472 1.9E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 470 2.2E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 SUPERFAMILY SSF55874 321 469 2.36E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 316 2.0E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 SUPERFAMILY SSF47384 236 316 8.83E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS11630 62a0b16aec0f49e5eb26cd92170bff9d 475 SMART SM00388 249 317 3.5E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS07950 3fa7e8669f303c3b972b1d59e67a7154 134 Gene3D G3DSA:1.20.1250.20 15 134 9.1E-4 T 29-03-2018 AM460_RS07950 3fa7e8669f303c3b972b1d59e67a7154 134 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 1.3E-22 T 29-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AM460_RS04755 c7bb32898835216c9c814f6f75105685 366 SUPERFAMILY SSF51905 3 168 4.58E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS04755 c7bb32898835216c9c814f6f75105685 366 SUPERFAMILY SSF51905 251 301 4.58E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS04755 c7bb32898835216c9c814f6f75105685 366 Pfam PF01494 FAD binding domain 135 166 1.8E-5 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM460_RS04755 c7bb32898835216c9c814f6f75105685 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 5.7E-11 T 29-03-2018 AM460_RS04755 c7bb32898835216c9c814f6f75105685 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.7E-11 T 29-03-2018 AM460_RS04755 c7bb32898835216c9c814f6f75105685 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 5.7E-11 T 29-03-2018 AM460_RS04755 c7bb32898835216c9c814f6f75105685 366 Gene3D G3DSA:3.50.50.60 3 333 4.2E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24955 8c03397fdac9d15bcb93c61a8738523c 195 Pfam PF16449 Fimbrillin MatB 26 193 1.7E-90 T 29-03-2018 IPR016514 Fimbrial protein MatB AM460_RS24955 8c03397fdac9d15bcb93c61a8738523c 195 PIRSF PIRSF007320 1 195 4.3E-118 T 29-03-2018 IPR016514 Fimbrial protein MatB AM460_RS16235 762bb683640bc5b58ce4afcdf5235c46 388 PIRSF PIRSF029172 1 388 5.1E-184 T 29-03-2018 IPR027020 Protein ynjB AM460_RS16235 762bb683640bc5b58ce4afcdf5235c46 388 Gene3D G3DSA:3.40.190.10 166 329 8.5E-16 T 29-03-2018 AM460_RS16235 762bb683640bc5b58ce4afcdf5235c46 388 Gene3D G3DSA:3.40.190.10 34 165 1.6E-6 T 29-03-2018 AM460_RS16235 762bb683640bc5b58ce4afcdf5235c46 388 Pfam PF13416 Bacterial extracellular solute-binding protein 62 340 1.3E-20 T 29-03-2018 AM460_RS16235 762bb683640bc5b58ce4afcdf5235c46 388 SUPERFAMILY SSF53850 32 385 3.37E-32 T 29-03-2018 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.1E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-100 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF07650 KH domain 38 111 1.1E-18 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.300.20 17 107 9.1E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54814 2 106 1.6E-37 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 SMART SM00322 60 125 1.6E-6 T 29-03-2018 IPR004087 K Homology domain GO:0003676 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.1140.32 108 207 3.4E-40 T 29-03-2018 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 29-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06850 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 SUPERFAMILY SSF58104 235 522 3.27E-76 T 29-03-2018 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 SMART SM00304 214 266 1.5E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 Gene3D G3DSA:1.20.120.30 23 188 4.3E-36 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 SUPERFAMILY SSF47170 39 178 1.05E-47 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 2.5E-91 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 2.5E-91 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.5E-91 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.5E-91 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 2.5E-91 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 2.5E-91 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 2.5E-91 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 Gene3D G3DSA:1.20.1480.30 229 319 8.1E-4 T 29-03-2018 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 Pfam PF02203 Tar ligand binding domain homologue 1 169 5.7E-45 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 Gene3D G3DSA:1.10.287.950 320 518 6.6E-49 T 29-03-2018 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 SMART SM00319 44 180 2.5E-44 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 SMART SM00283 267 514 7.1E-96 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 Pfam PF00672 HAMP domain 214 262 5.5E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS15540 43a2872392870cdfd7d551d5a66c405d 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 482 1.7E-60 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:3.40.190.10 177 261 1.4E-20 T 29-03-2018 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 SUPERFAMILY SSF53850 88 286 1.18E-49 T 29-03-2018 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:3.40.190.10 86 176 4.7E-26 T 29-03-2018 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 Pfam PF03466 LysR substrate binding domain 86 286 1.1E-53 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.1E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:1.10.10.10 1 84 8.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13555 cc3e6fb6928dbf30678f50efdfaf37a0 293 SUPERFAMILY SSF46785 2 109 2.18E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SUPERFAMILY SSF48452 592 698 3.54E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Pfam PF13432 Tetratricopeptide repeat 274 336 7.5E-7 T 29-03-2018 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Pfam PF13432 Tetratricopeptide repeat 389 442 3.2E-5 T 29-03-2018 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Gene3D G3DSA:1.25.40.10 447 587 8.9E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SUPERFAMILY SSF48452 70 212 6.32E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SUPERFAMILY SSF48452 240 339 6.32E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 802 1136 9.9E-119 T 29-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Gene3D G3DSA:1.25.40.10 22 109 5.9E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Gene3D G3DSA:1.25.40.10 355 440 7.0E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Gene3D G3DSA:1.25.40.10 322 354 0.0019 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SMART SM00028 461 494 98.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SMART SM00028 303 336 1.5E-5 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SMART SM00028 351 384 34.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SMART SM00028 603 636 260.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SMART SM00028 671 704 480.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SMART SM00028 385 418 0.33 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SMART SM00028 269 302 500.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SUPERFAMILY SSF48452 477 531 4.93E-22 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 SUPERFAMILY SSF48452 272 421 4.93E-22 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Gene3D G3DSA:1.25.40.10 110 265 1.6E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Pfam PF14559 Tetratricopeptide repeat 615 684 5.4E-7 T 29-03-2018 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Gene3D G3DSA:1.25.40.10 588 742 1.1E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS05655 ebdc70d721b2c97886ca476c8ce2b346 1157 Gene3D G3DSA:1.25.40.10 271 321 4.0E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS00860 1a8ed4e5a7a6beb190688975a4946006 182 Gene3D G3DSA:2.60.40.1090 31 182 2.1E-38 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS00860 1a8ed4e5a7a6beb190688975a4946006 182 SUPERFAMILY SSF49401 32 182 2.78E-36 T 29-03-2018 IPR008966 Adhesion domain AM460_RS00860 1a8ed4e5a7a6beb190688975a4946006 182 Pfam PF00419 Fimbrial protein 33 182 2.4E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 3.1E-151 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.3E-29 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF51621 1 74 2.09E-100 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF51621 156 340 2.09E-100 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 4.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 4.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 4.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 4.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 4.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF52935 323 469 9.68E-37 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF50800 70 166 1.67E-29 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.20.20.60 160 321 2.8E-65 T 29-03-2018 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:2.40.33.10 77 159 3.9E-31 T 29-03-2018 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.7E-193 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.40.1380.20 322 470 1.8E-46 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM460_RS16660 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.20.20.60 1 76 8.8E-19 T 29-03-2018 AM460_RS01965 4d4efb5c6faeee6dda85aef0af79ed30 104 ProDom PD069399 MEMBRANE INNER YJEO SIMILAR INTEGRAL ORF22 ESCHERICHIA TRANSMEMBRANE COLI 12 103 1.0E-38 T 29-03-2018 IPR022553 Protein of unknown function DUF2645 AM460_RS01965 4d4efb5c6faeee6dda85aef0af79ed30 104 Pfam PF10840 Protein of unknown function (DUF2645) 7 103 1.7E-39 T 29-03-2018 IPR022553 Protein of unknown function DUF2645 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 Gene3D G3DSA:3.30.465.10 107 268 9.4E-78 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 SUPERFAMILY SSF56176 10 271 7.48E-74 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 Pfam PF01565 FAD binding domain 47 166 5.7E-8 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 PIRSF PIRSF000101 4 569 0.0 T 29-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 Gene3D G3DSA:3.30.70.610 269 347 4.9E-21 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 Gene3D G3DSA:3.30.70.610 348 434 1.1E-28 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 Gene3D G3DSA:3.30.43.10 1 104 3.5E-12 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 6.2E-148 T 29-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 SUPERFAMILY SSF55103 275 567 1.68E-118 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM460_RS13710 98c3dfcb55d0f018cf38774370a2a7f0 571 Gene3D G3DSA:3.30.1370.20 435 518 3.7E-43 T 29-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 SUPERFAMILY SSF53955 245 398 9.01E-34 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 SUPERFAMILY SSF53955 433 441 9.01E-34 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 268 1.1E-30 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 Gene3D G3DSA:1.10.530.10 273 451 2.8E-34 T 29-03-2018 AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 Pfam PF01464 Transglycosylase SLT domain 297 402 3.2E-22 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 SUPERFAMILY SSF53850 40 268 4.01E-35 T 29-03-2018 AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 SMART SM00062 47 269 1.1E-50 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 473 47.48 T 29-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 Gene3D G3DSA:3.40.190.10 165 271 1.7E-5 T 29-03-2018 AM460_RS11615 03d8e65717ec8e662f7c435fe057b990 518 Gene3D G3DSA:3.40.190.10 34 155 5.3E-16 T 29-03-2018 AM460_RS06065 8ca974e156348b08e2e94fc2b0be7d03 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 2.5E-31 T 29-03-2018 IPR019635 Protein of unknown function DUF2500 AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:1.10.10.10 137 238 2.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF46894 136 234 7.65E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:3.40.50.2300 1 136 9.9E-32 T 29-03-2018 AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00072 Response regulator receiver domain 6 113 8.5E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00862 156 232 3.7E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00448 4 114 6.3E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF52172 2 126 2.85E-36 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS00115 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.5E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS08010 a13e2b0a5a8628b6949c6d686bf5aac1 328 SUPERFAMILY SSF55347 126 290 6.05E-23 T 29-03-2018 AM460_RS08010 a13e2b0a5a8628b6949c6d686bf5aac1 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.9E-27 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM460_RS08010 a13e2b0a5a8628b6949c6d686bf5aac1 328 SUPERFAMILY SSF51735 2 152 5.71E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS08010 a13e2b0a5a8628b6949c6d686bf5aac1 328 Gene3D G3DSA:3.40.50.720 1 142 4.4E-33 T 29-03-2018 AM460_RS08010 a13e2b0a5a8628b6949c6d686bf5aac1 328 Gene3D G3DSA:3.30.360.10 143 325 2.3E-25 T 29-03-2018 AM460_RS22825 ab5a7e253e4542fe06458f799b751008 218 SUPERFAMILY SSF160467 5 93 1.57E-9 T 29-03-2018 AM460_RS22825 ab5a7e253e4542fe06458f799b751008 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 2.3E-70 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM460_RS22825 ab5a7e253e4542fe06458f799b751008 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.9E-106 T 29-03-2018 IPR010016 KipI family AM460_RS22825 ab5a7e253e4542fe06458f799b751008 218 SUPERFAMILY SSF50891 88 214 1.18E-46 T 29-03-2018 IPR029000 Cyclophilin-like domain AM460_RS22825 ab5a7e253e4542fe06458f799b751008 218 Gene3D G3DSA:3.30.1360.40 1 82 6.6E-9 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM460_RS22825 ab5a7e253e4542fe06458f799b751008 218 Gene3D G3DSA:2.40.100.10 86 217 8.0E-51 T 29-03-2018 IPR029000 Cyclophilin-like domain AM460_RS22825 ab5a7e253e4542fe06458f799b751008 218 SMART SM00796 4 202 3.5E-94 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM460_RS16210 e857750572aabb6b6d2d58de3df6e9ec 135 PRINTS PR00502 NUDIX hydrolase family signature 46 61 6.1E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS16210 e857750572aabb6b6d2d58de3df6e9ec 135 PRINTS PR00502 NUDIX hydrolase family signature 32 46 6.1E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS16210 e857750572aabb6b6d2d58de3df6e9ec 135 Pfam PF00293 NUDIX domain 5 125 2.3E-21 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS16210 e857750572aabb6b6d2d58de3df6e9ec 135 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS16210 e857750572aabb6b6d2d58de3df6e9ec 135 Gene3D G3DSA:3.90.79.10 2 135 6.8E-34 T 29-03-2018 AM460_RS16210 e857750572aabb6b6d2d58de3df6e9ec 135 SUPERFAMILY SSF55811 1 125 7.45E-36 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS19385 02a87b603dbe9e73b9f5d2d2c2a58488 219 SUPERFAMILY SSF56529 11 213 1.24E-69 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM460_RS19385 02a87b603dbe9e73b9f5d2d2c2a58488 219 Gene3D G3DSA:3.90.850.10 2 218 9.1E-71 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM460_RS19385 02a87b603dbe9e73b9f5d2d2c2a58488 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 210 1.3E-52 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 SUPERFAMILY SSF56003 302 318 2.09E-166 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 SUPERFAMILY SSF56003 354 955 2.09E-166 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 SUPERFAMILY SSF54665 164 317 4.97E-45 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 PIRSF PIRSF000127 146 343 1.2E-15 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 PIRSF PIRSF000127 51 146 0.47 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 PIRSF PIRSF000127 355 945 1.2E-66 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Gene3D G3DSA:3.30.365.10 470 638 1.2E-36 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Pfam PF01799 [2Fe-2S] binding domain 73 144 9.8E-9 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 SMART SM01008 186 298 1.8E-35 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Gene3D G3DSA:1.10.150.120 73 179 4.7E-14 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Gene3D G3DSA:3.30.365.10 646 789 9.5E-35 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 355 893 2.6E-148 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 SUPERFAMILY SSF47741 84 188 3.93E-17 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Gene3D G3DSA:3.90.1170.50 180 299 2.4E-25 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 955 0.0 T 29-03-2018 IPR017699 Molybdenum-binding protein YgfN/XdhD AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Gene3D G3DSA:3.30.365.10 364 469 4.7E-31 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Gene3D G3DSA:3.30.365.10 790 956 1.1E-45 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09780 5534faa296e0c545cff8aa3bfcfd60cc 956 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 187 297 2.9E-30 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS12885 f90d60219db6a32804d897d57c9f691e 405 Gene3D G3DSA:3.40.640.10 53 280 4.8E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS12885 f90d60219db6a32804d897d57c9f691e 405 SUPERFAMILY SSF53383 7 401 4.17E-94 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS12885 f90d60219db6a32804d897d57c9f691e 405 Gene3D G3DSA:3.90.1150.10 281 405 1.1E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS12885 f90d60219db6a32804d897d57c9f691e 405 Pfam PF00155 Aminotransferase class I and II 58 387 8.8E-47 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 2.8E-14 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 Gene3D G3DSA:3.30.70.1050 1 118 5.5E-35 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 SUPERFAMILY SSF54534 97 241 2.16E-37 T 29-03-2018 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 Hamap MF_00303 Trigger factor [tig]. 1 418 22.317 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 SUPERFAMILY SSF102735 1 131 5.62E-39 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 Gene3D G3DSA:1.10.3120.10 211 389 1.2E-47 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 9.3E-41 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.5E-41 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 SUPERFAMILY SSF109998 248 429 4.05E-48 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 PIRSF PIRSF003095 1 432 3.2E-132 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AM460_RS24185 f36b61600b90acbd562053f5f3ee15c1 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 5.5E-144 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AM460_RS09255 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS09255 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS09255 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.10 5 67 3.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09100 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS09100 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS09100 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.10 5 67 3.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01285 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS01285 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS01285 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.10 5 67 3.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27970 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS27970 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS27970 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.10 5 67 3.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14995 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS14995 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS14995 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.10 5 67 3.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS19160 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS19160 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS19160 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.10 5 67 3.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03955 8fc0f39d608f014474968ffb90e60976 254 Gene3D G3DSA:3.40.50.1580 3 254 2.0E-56 T 29-03-2018 AM460_RS03955 8fc0f39d608f014474968ffb90e60976 254 Pfam PF01048 Phosphorylase superfamily 21 250 1.2E-40 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS03955 8fc0f39d608f014474968ffb90e60976 254 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS03955 8fc0f39d608f014474968ffb90e60976 254 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.9E-133 T 29-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AM460_RS03955 8fc0f39d608f014474968ffb90e60976 254 SUPERFAMILY SSF53167 6 250 6.55E-73 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS18980 218993131d81f27abaaacd6d03856761 117 Pfam PF02635 DsrE/DsrF-like family 2 117 2.5E-23 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM460_RS18980 218993131d81f27abaaacd6d03856761 117 Gene3D G3DSA:3.40.1260.10 1 117 3.1E-29 T 29-03-2018 AM460_RS18980 218993131d81f27abaaacd6d03856761 117 SUPERFAMILY SSF75169 1 117 1.1E-35 T 29-03-2018 IPR027396 DsrEFH-like AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 29-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 Gene3D G3DSA:3.40.710.10 27 286 1.6E-35 T 29-03-2018 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 Pfam PF13354 Beta-lactamase enzyme family 49 256 7.7E-40 T 29-03-2018 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 30 54 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27895 a57302ca27229fb06a22728ba4bd7aca 286 SUPERFAMILY SSF56601 29 285 2.91E-79 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 29-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 Gene3D G3DSA:3.40.710.10 27 286 1.6E-35 T 29-03-2018 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 Pfam PF13354 Beta-lactamase enzyme family 49 256 7.7E-40 T 29-03-2018 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 30 54 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM460_RS27320 a57302ca27229fb06a22728ba4bd7aca 286 SUPERFAMILY SSF56601 29 285 2.91E-79 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS24565 f60bbc536504abdf8c7ca620f7506b13 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 2.4E-60 T 29-03-2018 IPR018636 Protein of unknown function DUF2058 AM460_RS02155 f0c8c8c6f53e9bb51c6200354807c9a7 276 Gene3D G3DSA:1.10.10.60 214 276 8.9E-15 T 29-03-2018 AM460_RS02155 f0c8c8c6f53e9bb51c6200354807c9a7 276 SMART SM00342 187 269 1.4E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS02155 f0c8c8c6f53e9bb51c6200354807c9a7 276 Pfam PF12833 Helix-turn-helix domain 193 268 8.4E-14 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS02155 f0c8c8c6f53e9bb51c6200354807c9a7 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 2.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02155 f0c8c8c6f53e9bb51c6200354807c9a7 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 2.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02155 f0c8c8c6f53e9bb51c6200354807c9a7 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS02155 f0c8c8c6f53e9bb51c6200354807c9a7 276 SUPERFAMILY SSF46689 222 268 1.16E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS24450 33221920300f1b251518b225a4291ac6 371 SUPERFAMILY SSF55073 215 368 4.71E-44 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS24450 33221920300f1b251518b225a4291ac6 371 Gene3D G3DSA:3.30.70.270 193 371 1.7E-49 T 29-03-2018 AM460_RS24450 33221920300f1b251518b225a4291ac6 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 366 4.6E-47 T 29-03-2018 IPR000160 GGDEF domain AM460_RS24450 33221920300f1b251518b225a4291ac6 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 370 5.1E-66 T 29-03-2018 IPR000160 GGDEF domain AM460_RS24450 33221920300f1b251518b225a4291ac6 371 Pfam PF05230 MASE2 domain 40 128 2.2E-28 T 29-03-2018 IPR007894 MASE2 AM460_RS24450 33221920300f1b251518b225a4291ac6 371 SMART SM00267 199 370 1.0E-66 T 29-03-2018 IPR000160 GGDEF domain AM460_RS24205 b75ad70f49fa51978faf8c4812b8a6aa 491 SUPERFAMILY SSF103473 15 404 2.75E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS24205 b75ad70f49fa51978faf8c4812b8a6aa 491 Pfam PF07690 Major Facilitator Superfamily 17 366 2.3E-31 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS24205 b75ad70f49fa51978faf8c4812b8a6aa 491 Gene3D G3DSA:1.20.1250.20 208 414 2.4E-17 T 29-03-2018 AM460_RS24205 b75ad70f49fa51978faf8c4812b8a6aa 491 Gene3D G3DSA:1.20.1250.20 1 200 8.4E-23 T 29-03-2018 AM460_RS24205 b75ad70f49fa51978faf8c4812b8a6aa 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 3.0E-128 T 29-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Gene3D G3DSA:3.30.190.20 134 248 2.3E-42 T 29-03-2018 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 SUPERFAMILY SSF52540 433 569 1.67E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 SUPERFAMILY SSF52540 4 204 1.67E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Gene3D G3DSA:3.40.50.300 36 133 1.6E-4 T 29-03-2018 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Gene3D G3DSA:1.10.8.280 285 405 4.4E-37 T 29-03-2018 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Gene3D G3DSA:3.40.50.300 1 35 2.2E-8 T 29-03-2018 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.222 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Gene3D G3DSA:3.40.50.300 414 614 3.7E-21 T 29-03-2018 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 Gene3D G3DSA:3.40.50.300 615 939 4.8E-55 T 29-03-2018 AM460_RS02625 a96f2cdded379422d8e5e9c5dda9d517 940 SUPERFAMILY SSF52540 613 911 2.9E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Gene3D G3DSA:1.20.120.530 83 244 1.6E-24 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SMART SM00895 94 224 2.5E-19 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Gene3D G3DSA:1.10.10.10 1 75 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SMART SM00345 13 72 2.0E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SUPERFAMILY SSF48008 93 232 1.18E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 9.6E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SUPERFAMILY SSF46785 8 76 3.13E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.2E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.2E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08480 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Pfam PF07729 FCD domain 94 223 1.7E-19 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS03875 9d7cacf25e6bf152f5cf75cd6bcaff38 497 SUPERFAMILY SSF50475 6 325 2.43E-128 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS03875 9d7cacf25e6bf152f5cf75cd6bcaff38 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 1.7E-191 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM460_RS03875 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 5.3E-173 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM460_RS03875 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.603 T 29-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM460_RS03875 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Gene3D G3DSA:1.20.5.570 463 490 1.2E-19 T 29-03-2018 AM460_RS03875 9d7cacf25e6bf152f5cf75cd6bcaff38 497 SUPERFAMILY SSF143968 326 489 3.4E-66 T 29-03-2018 AM460_RS03875 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Gene3D G3DSA:3.40.1670.10 326 462 2.3E-52 T 29-03-2018 AM460_RS24295 726e62e250bbd136faca4fd18d794103 156 SUPERFAMILY SSF52121 4 154 7.85E-59 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS24295 726e62e250bbd136faca4fd18d794103 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.3E-60 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS24295 726e62e250bbd136faca4fd18d794103 156 Gene3D G3DSA:3.40.50.960 1 155 1.2E-64 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS24295 726e62e250bbd136faca4fd18d794103 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.65 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS24295 726e62e250bbd136faca4fd18d794103 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.4E-55 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 1.6E-116 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 SUPERFAMILY SSF82861 834 916 1.7E-8 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 Pfam PF00924 Mechanosensitive ion channel 875 1074 1.5E-53 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 SUPERFAMILY SSF82689 985 1083 7.85E-16 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 Gene3D G3DSA:2.30.30.60 933 982 2.0E-12 T 29-03-2018 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 SUPERFAMILY SSF50182 918 983 7.52E-17 T 29-03-2018 IPR010920 LSM domain AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 31 256 2.8E-53 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 Gene3D G3DSA:3.30.70.100 985 1079 1.6E-11 T 29-03-2018 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 Gene3D G3DSA:1.20.5.110 209 801 2.9E-4 T 29-03-2018 AM460_RS01960 50c06a6ac1907d5b9e7d90ccc97e1399 1107 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 Gene3D G3DSA:3.50.50.60 1 365 9.7E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.5E-19 T 29-03-2018 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.5E-19 T 29-03-2018 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.5E-19 T 29-03-2018 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.5E-19 T 29-03-2018 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 SUPERFAMILY SSF51905 4 177 1.64E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 SUPERFAMILY SSF51905 268 385 1.64E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 3.5E-134 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM460_RS09655 124b1f40f69ec2dfcd6fb0c676053d69 400 Pfam PF01494 FAD binding domain 4 345 1.3E-28 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM460_RS18925 b35134631aee5254ff80c728e9777205 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 2.8E-30 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM460_RS18925 b35134631aee5254ff80c728e9777205 338 Gene3D G3DSA:3.90.25.10 180 338 1.3E-18 T 29-03-2018 AM460_RS18925 b35134631aee5254ff80c728e9777205 338 SUPERFAMILY SSF51735 298 334 3.52E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18925 b35134631aee5254ff80c728e9777205 338 SUPERFAMILY SSF51735 2 269 3.52E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18925 b35134631aee5254ff80c728e9777205 338 Gene3D G3DSA:3.40.50.720 1 179 4.6E-32 T 29-03-2018 AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 2.1E-40 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.407 T 29-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 1.6E-18 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 SMART SM00967 4 80 3.9E-21 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 SUPERFAMILY SSF55315 2 76 5.18E-21 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 Gene3D G3DSA:3.40.1280.10 77 243 1.7E-49 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 9.3E-95 T 29-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 Gene3D G3DSA:3.30.1330.30 1 76 2.4E-18 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AM460_RS01850 408cf5369cfd018aab68e18204ca5547 243 SUPERFAMILY SSF75217 68 242 3.2E-49 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 Pfam PF01467 Cytidylyltransferase-like 345 469 3.6E-15 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 Gene3D G3DSA:3.40.1190.20 2 310 1.7E-60 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 3.0E-130 T 29-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 SUPERFAMILY SSF53613 12 309 5.14E-60 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.522 T 29-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 SUPERFAMILY SSF52374 340 471 7.32E-22 T 29-03-2018 AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 Pfam PF00294 pfkB family carbohydrate kinase 12 305 5.1E-60 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.6E-64 T 29-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 Gene3D G3DSA:3.40.50.620 320 477 9.6E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS08225 1fc2249e1c4bebb40e213b246a12a9ed 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS08460 b44c06ad9e8e3e20b443321ed795c650 327 PIRSF PIRSF006470 1 324 2.3E-85 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM460_RS08460 b44c06ad9e8e3e20b443321ed795c650 327 Gene3D G3DSA:3.40.190.10 153 227 8.9E-5 T 29-03-2018 AM460_RS08460 b44c06ad9e8e3e20b443321ed795c650 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 270 5.0E-66 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM460_RS08460 b44c06ad9e8e3e20b443321ed795c650 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 5.2E-80 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM460_RS26850 38b9fa472ac7ba914945ea7eaca96dde 100 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 1 100 4.0E-46 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS26850 38b9fa472ac7ba914945ea7eaca96dde 100 Pfam PF03230 Antirestriction protein 4 100 1.3E-27 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS22265 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 13 146 4.1E-39 T 29-03-2018 AM460_RS22265 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 147 248 2.0E-18 T 29-03-2018 AM460_RS22265 91e1fc09c4c0571f784e7272bf3d625a 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM460_RS22265 91e1fc09c4c0571f784e7272bf3d625a 248 SUPERFAMILY SSF53850 7 245 8.25E-75 T 29-03-2018 AM460_RS22265 91e1fc09c4c0571f784e7272bf3d625a 248 SMART SM00062 26 246 5.7E-74 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS22265 91e1fc09c4c0571f784e7272bf3d625a 248 SMART SM00079 26 245 1.3E-7 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM460_RS22265 91e1fc09c4c0571f784e7272bf3d625a 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 1.0E-70 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 5.0E-74 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 SMART SM00278 73 92 1.3 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 SMART SM00278 108 127 0.05 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF01330 RuvA N terminal domain 2 62 5.0E-20 T 29-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF47781 66 137 9.18E-22 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:1.10.150.20 81 142 1.0E-14 T 29-03-2018 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:2.40.50.140 2 56 1.7E-23 T 29-03-2018 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.4E-16 T 29-03-2018 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF50249 2 63 7.42E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF07499 RuvA, C-terminal domain 159 201 2.7E-15 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.86 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:1.10.8.10 157 202 1.7E-15 T 29-03-2018 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:1.10.150.280 57 80 0.029 T 29-03-2018 AM460_RS15670 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF46929 157 201 7.59E-11 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM460_RS09695 ce7aa2fb8257edc26db1b4e10ec44400 88 Gene3D G3DSA:1.10.150.250 1 85 4.1E-27 T 29-03-2018 AM460_RS09695 ce7aa2fb8257edc26db1b4e10ec44400 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 75 7.4E-26 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase AM460_RS09695 ce7aa2fb8257edc26db1b4e10ec44400 88 SUPERFAMILY SSF109910 1 78 3.92E-27 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 331 7.6E-153 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 Pfam PF14842 FliG N-terminal domain 3 103 2.4E-29 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 Pfam PF01706 FliG C-terminal domain 218 323 1.6E-37 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 SUPERFAMILY SSF48029 115 324 9.55E-63 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 5.8E-75 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 5.8E-75 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 5.8E-75 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 5.8E-75 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 5.8E-75 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 5.8E-75 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 5.8E-75 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 SUPERFAMILY SSF48029 5 104 2.62E-18 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 Gene3D G3DSA:1.10.220.30 2 66 2.4E-10 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 Pfam PF14841 FliG middle domain 115 186 3.9E-24 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 PIRSF PIRSF003161 1 331 2.6E-118 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 Gene3D G3DSA:1.10.220.30 67 189 1.3E-21 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM460_RS14945 142007a5db6d956b34a72e96db840cdf 331 Gene3D G3DSA:1.10.220.30 194 331 1.2E-29 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 1.3E-162 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 SMART SM00861 354 525 7.8E-62 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.5E-17 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 SUPERFAMILY SSF52518 335 525 2.59E-64 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 SUPERFAMILY SSF52922 533 664 2.22E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 SUPERFAMILY SSF52518 4 320 1.92E-121 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 Gene3D G3DSA:3.40.50.920 541 662 8.7E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.8E-43 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 664 3.7E-304 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 Gene3D G3DSA:3.40.50.970 364 540 2.6E-38 T 29-03-2018 AM460_RS04010 aed21bf36be51a1fca315bbfee09b38c 665 Gene3D G3DSA:3.40.50.970 1 363 1.3E-123 T 29-03-2018 AM460_RS03505 dfa9e01deeb9b70c1ffa4b789a91d914 166 PIRSF PIRSF034445 2 146 6.8E-31 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM460_RS03505 dfa9e01deeb9b70c1ffa4b789a91d914 166 Pfam PF07813 LTXXQ motif family protein 41 135 7.5E-22 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM460_RS06530 fcd6368c824fb615b7590f1585477f35 408 PIRSF PIRSF001491 1 402 1.5E-114 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM460_RS06530 fcd6368c824fb615b7590f1585477f35 408 Gene3D G3DSA:3.40.720.10 1 403 1.3E-42 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS06530 fcd6368c824fb615b7590f1585477f35 408 Pfam PF01676 Metalloenzyme superfamily 3 388 2.6E-49 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM460_RS06530 fcd6368c824fb615b7590f1585477f35 408 SUPERFAMILY SSF53649 230 399 1.44E-55 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS06530 fcd6368c824fb615b7590f1585477f35 408 SUPERFAMILY SSF53649 3 100 1.44E-55 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS08610 3ce78319232000b79c3f83c941d53e77 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 6.3E-6 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS08610 3ce78319232000b79c3f83c941d53e77 288 SUPERFAMILY SSF52833 37 130 6.34E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS08610 3ce78319232000b79c3f83c941d53e77 288 SUPERFAMILY SSF47616 133 279 1.17E-32 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS08610 3ce78319232000b79c3f83c941d53e77 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 243 2.1E-9 T 29-03-2018 AM460_RS08610 3ce78319232000b79c3f83c941d53e77 288 Gene3D G3DSA:3.40.30.10 45 145 2.8E-23 T 29-03-2018 AM460_RS08610 3ce78319232000b79c3f83c941d53e77 288 Gene3D G3DSA:1.20.1050.10 146 288 8.6E-29 T 29-03-2018 AM460_RS01780 93ea0a4197e19f7a2e093fe1ce9a3dc5 354 Hamap MF_01266 Probable L-ascorbate-6-phosphate lactonase UlaG [ulaG]. 1 354 99.387 T 29-03-2018 IPR023951 L-ascorbate-6-phosphate lactonase UlaG GO:0019854|GO:0030145|GO:0035460 AM460_RS01780 93ea0a4197e19f7a2e093fe1ce9a3dc5 354 Gene3D G3DSA:3.60.15.10 1 337 2.3E-49 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS01780 93ea0a4197e19f7a2e093fe1ce9a3dc5 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 7.4E-15 T 29-03-2018 AM460_RS01780 93ea0a4197e19f7a2e093fe1ce9a3dc5 354 SUPERFAMILY SSF56281 36 302 7.98E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS05425 3cbc160a899eba35c3baa2e4a7fec670 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 1.4E-167 T 29-03-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 AM460_RS05425 3cbc160a899eba35c3baa2e4a7fec670 330 Pfam PF13407 Periplasmic binding protein domain 38 286 6.4E-62 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS05425 3cbc160a899eba35c3baa2e4a7fec670 330 SUPERFAMILY SSF53822 24 318 2.19E-72 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS05425 3cbc160a899eba35c3baa2e4a7fec670 330 Gene3D G3DSA:3.40.50.2300 130 329 5.6E-36 T 29-03-2018 AM460_RS05425 3cbc160a899eba35c3baa2e4a7fec670 330 Gene3D G3DSA:3.40.50.2300 26 129 3.3E-20 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Pfam PF13247 4Fe-4S dicluster domain 55 144 3.9E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.30.70.20 95 166 5.0E-12 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 SUPERFAMILY SSF54862 196 293 2.18E-43 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 SUPERFAMILY SSF54862 1 161 2.18E-43 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 SUPERFAMILY SSF51971 327 582 1.18E-68 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:1.10.1060.10 176 319 3.5E-38 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 328 640 5.5E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.20.20.70 320 342 0.036 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.50.50.60 583 658 2.8E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 205 315 4.4E-37 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.40.50.720 343 418 6.5E-14 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.30.70.20 73 94 9.4E-10 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 187 653 2.5E-265 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.50.50.60 419 495 1.5E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.50.50.60 496 582 1.6E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 PRINTS PR00419 Adrenodoxin reductase family signature 471 485 3.7E-38 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 PRINTS PR00419 Adrenodoxin reductase family signature 352 365 3.7E-38 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 PRINTS PR00419 Adrenodoxin reductase family signature 505 518 3.7E-38 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 PRINTS PR00419 Adrenodoxin reductase family signature 394 404 3.7E-38 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 PRINTS PR00419 Adrenodoxin reductase family signature 329 351 3.7E-38 T 29-03-2018 AM460_RS12040 bb284efb5e6e1def02338ba3d5e39927 659 Gene3D G3DSA:3.30.70.20 2 72 1.7E-9 T 29-03-2018 AM460_RS01895 359f034d49a15f06bd355b17c624892c 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 1.6E-125 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM460_RS01895 359f034d49a15f06bd355b17c624892c 316 Gene3D G3DSA:1.10.287.890 207 289 2.5E-25 T 29-03-2018 AM460_RS01895 359f034d49a15f06bd355b17c624892c 316 SUPERFAMILY SSF52540 13 157 9.81E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01895 359f034d49a15f06bd355b17c624892c 316 Gene3D G3DSA:3.40.50.300 9 203 3.6E-60 T 29-03-2018 AM460_RS01895 359f034d49a15f06bd355b17c624892c 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.757 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM460_RS01895 359f034d49a15f06bd355b17c624892c 316 Pfam PF01715 IPP transferase 46 290 3.4E-85 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM460_RS16275 6ea6ee5d8e77f24b65192eece75b5997 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 343 72.909 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM460_RS16275 6ea6ee5d8e77f24b65192eece75b5997 344 SUPERFAMILY SSF55729 1 337 3.91E-134 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS16275 6ea6ee5d8e77f24b65192eece75b5997 344 Gene3D G3DSA:2.40.40.20 275 337 2.3E-20 T 29-03-2018 AM460_RS16275 6ea6ee5d8e77f24b65192eece75b5997 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 3.4E-145 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM460_RS16275 6ea6ee5d8e77f24b65192eece75b5997 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 9.7E-155 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM460_RS16275 6ea6ee5d8e77f24b65192eece75b5997 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 1.5E-167 T 29-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM460_RS16275 6ea6ee5d8e77f24b65192eece75b5997 344 Gene3D G3DSA:3.40.630.30 1 274 1.4E-25 T 29-03-2018 AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.9E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 Gene3D G3DSA:1.10.10.10 126 239 6.1E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 SMART SM00448 5 116 8.6E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 Gene3D G3DSA:3.40.50.2300 2 125 2.0E-38 T 29-03-2018 AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 SMART SM00862 156 232 1.8E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS06385 afb0fdac3ad41c319f9c3eb78ec6db62 239 SUPERFAMILY SSF46894 132 234 1.87E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS09565 a662bcf101235224438618fb5a38c7ab 211 Pfam PF01810 LysE type translocator 14 201 3.5E-57 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS09565 a662bcf101235224438618fb5a38c7ab 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.578 T 29-03-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 AM460_RS09565 a662bcf101235224438618fb5a38c7ab 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 9.4E-73 T 29-03-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 566 672 7.32E-29 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 39 132 4.53E-27 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.70.1430 38 141 5.6E-29 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82714 723 809 5.36E-23 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 138 182 1.46E-24 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 274 330 1.46E-24 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.70.1430 568 672 2.8E-24 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82866 807 1030 7.59E-45 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.70.1440 673 769 1.7E-23 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.2090.10 180 273 7.1E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82866 296 497 1.44E-47 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82714 182 272 1.7E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:1.20.1640.10 821 1030 1.1E-37 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:1.20.1640.10 274 500 7.8E-43 T 29-03-2018 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS12030 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.0E-110 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 Gene3D G3DSA:2.60.40.1180 407 495 3.0E-31 T 29-03-2018 AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 SMART SM00642 4 402 5.0E-60 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 SUPERFAMILY SSF51445 7 404 3.15E-88 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 416 491 5.9E-6 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 Gene3D G3DSA:3.20.20.80 4 386 7.1E-68 T 29-03-2018 AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 PIRSF PIRSF001021 1 494 9.1E-209 T 29-03-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 SUPERFAMILY SSF51011 405 491 1.03E-29 T 29-03-2018 AM460_RS15035 fe1b14c88eee1debee777c19c3f0e1eb 495 Pfam PF00128 Alpha amylase, catalytic domain 30 367 5.4E-21 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS02010 4c57b23ab62f3064487d3fd7f5504aa8 105 SUPERFAMILY SSF103481 5 103 9.42E-21 T 29-03-2018 AM460_RS02010 4c57b23ab62f3064487d3fd7f5504aa8 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.3E-33 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM460_RS27330 7029f7e80752b5d87477647944cf2b7d 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 95 1.1E-12 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM460_RS27330 7029f7e80752b5d87477647944cf2b7d 99 Gene3D G3DSA:3.30.2310.20 1 94 1.2E-5 T 29-03-2018 AM460_RS27330 7029f7e80752b5d87477647944cf2b7d 99 SUPERFAMILY SSF143011 1 89 2.9E-5 T 29-03-2018 IPR035095 Toxin RelE-like domain AM460_RS17175 245ad62c5fa6dff994fe21d93ed521a7 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 236 8.6E-128 T 29-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 AM460_RS17175 245ad62c5fa6dff994fe21d93ed521a7 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 236 1.0E-136 T 29-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 AM460_RS17175 245ad62c5fa6dff994fe21d93ed521a7 236 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 2 236 38.799 T 29-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 SMART SM01130 1 290 1.4E-141 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 4.8E-126 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 3.4E-127 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 PIRSF PIRSF001365 1 292 6.1E-99 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 Gene3D G3DSA:3.20.20.70 1 292 2.1E-92 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.636 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS11980 bb329795a06092d7524eb26961f2fade 292 SUPERFAMILY SSF51569 1 292 1.0E-99 T 29-03-2018 AM460_RS25245 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF53955 99 249 1.13E-41 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS25245 4c991d24375147672387b8f55871976f 452 Pfam PF01476 LysM domain 402 442 9.7E-11 T 29-03-2018 IPR018392 LysM domain AM460_RS25245 4c991d24375147672387b8f55871976f 452 Pfam PF01476 LysM domain 343 384 7.6E-15 T 29-03-2018 IPR018392 LysM domain AM460_RS25245 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF54106 400 443 2.49E-10 T 29-03-2018 IPR018392 LysM domain AM460_RS25245 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:1.10.530.10 20 246 5.3E-35 T 29-03-2018 AM460_RS25245 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:3.10.350.10 399 445 1.5E-15 T 29-03-2018 AM460_RS25245 4c991d24375147672387b8f55871976f 452 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 121 149 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM460_RS25245 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:3.10.350.10 339 398 1.1E-15 T 29-03-2018 AM460_RS25245 4c991d24375147672387b8f55871976f 452 Pfam PF01464 Transglycosylase SLT domain 102 216 1.2E-29 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS25245 4c991d24375147672387b8f55871976f 452 SMART SM00257 342 385 1.4E-16 T 29-03-2018 IPR018392 LysM domain AM460_RS25245 4c991d24375147672387b8f55871976f 452 SMART SM00257 401 443 4.6E-13 T 29-03-2018 IPR018392 LysM domain AM460_RS25245 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF54106 341 384 9.29E-12 T 29-03-2018 IPR018392 LysM domain AM460_RS15045 768c50eb41fa8ba12a2da39039b2689f 136 PIRSF PIRSF039090 1 135 8.4E-45 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM460_RS15045 768c50eb41fa8ba12a2da39039b2689f 136 Pfam PF02561 Flagellar protein FliS 8 124 3.9E-34 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM460_RS15045 768c50eb41fa8ba12a2da39039b2689f 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 129 8.6E-59 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM460_RS15045 768c50eb41fa8ba12a2da39039b2689f 136 SUPERFAMILY SSF101116 8 124 5.49E-34 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM460_RS15045 768c50eb41fa8ba12a2da39039b2689f 136 Gene3D G3DSA:1.20.120.340 1 126 1.1E-35 T 29-03-2018 AM460_RS04965 08ac57ad5c39f08269ca08559f1ad31b 310 SUPERFAMILY SSF53067 1 300 1.24E-61 T 29-03-2018 AM460_RS04965 08ac57ad5c39f08269ca08559f1ad31b 310 Gene3D G3DSA:3.30.420.40 1 116 1.7E-23 T 29-03-2018 AM460_RS04965 08ac57ad5c39f08269ca08559f1ad31b 310 ProSitePatterns PS01125 ROK family signature. 131 158 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS04965 08ac57ad5c39f08269ca08559f1ad31b 310 Gene3D G3DSA:3.30.420.40 117 309 4.5E-49 T 29-03-2018 AM460_RS04965 08ac57ad5c39f08269ca08559f1ad31b 310 Pfam PF00480 ROK family 3 299 2.1E-72 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS02950 34d7052280b152a27a6a4dbfeae1845b 274 Pfam PF09339 IclR helix-turn-helix domain 26 76 1.1E-18 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS02950 34d7052280b152a27a6a4dbfeae1845b 274 Gene3D G3DSA:1.10.10.10 7 85 9.1E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02950 34d7052280b152a27a6a4dbfeae1845b 274 SMART SM00346 24 114 5.8E-38 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS02950 34d7052280b152a27a6a4dbfeae1845b 274 Pfam PF01614 Bacterial transcriptional regulator 145 267 1.4E-41 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS02950 34d7052280b152a27a6a4dbfeae1845b 274 SUPERFAMILY SSF55781 95 271 1.31E-49 T 29-03-2018 IPR029016 GAF domain-like AM460_RS02950 34d7052280b152a27a6a4dbfeae1845b 274 Gene3D G3DSA:3.30.450.40 95 274 2.0E-50 T 29-03-2018 IPR029016 GAF domain-like AM460_RS02950 34d7052280b152a27a6a4dbfeae1845b 274 SUPERFAMILY SSF46785 24 97 2.37E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14225 3d94ea30ecbdf959ac0021fbfdffb577 452 PIRSF PIRSF006060 2 445 8.7E-72 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS14225 3d94ea30ecbdf959ac0021fbfdffb577 452 Pfam PF13520 Amino acid permease 57 409 7.3E-35 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS20970 0f7490d45baddf54e20237a41e546b97 227 Gene3D G3DSA:3.40.50.300 5 224 1.1E-52 T 29-03-2018 AM460_RS20970 0f7490d45baddf54e20237a41e546b97 227 SUPERFAMILY SSF52540 6 224 5.98E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20970 0f7490d45baddf54e20237a41e546b97 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.5E-97 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM460_RS20970 0f7490d45baddf54e20237a41e546b97 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.523 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM460_RS20970 0f7490d45baddf54e20237a41e546b97 227 Pfam PF02224 Cytidylate kinase 8 221 4.2E-85 T 29-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 SUPERFAMILY SSF53335 7 254 7.1E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 TIGRFAM TIGR00571 dam: DNA adenine methylase 6 244 5.0E-34 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 229 6.1E-27 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 PIRSF PIRSF000398 2 254 2.3E-47 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 Gene3D G3DSA:3.40.50.150 2 254 5.7E-37 T 29-03-2018 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 173 185 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS21070 9cfc626f48bd20f9ce3e79f91058cb8f 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 32 46 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 Gene3D G3DSA:3.10.290.10 1 62 3.4E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 Pfam PF01479 S4 domain 1 45 2.9E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 SUPERFAMILY SSF55174 1 55 1.62E-12 T 29-03-2018 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 Pfam PF00849 RNA pseudouridylate synthase 62 192 6.5E-18 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 8.1E-61 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 SUPERFAMILY SSF55120 61 227 1.23E-47 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 Gene3D G3DSA:3.30.2350.10 63 228 9.9E-40 T 29-03-2018 AM460_RS13420 fa03fcb61a8edc1b5b91fad4d162279e 231 SMART SM00363 1 60 4.2E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS13210 264e24997204dbd0b3839e380534dcae 216 SMART SM00882 5 198 3.6E-65 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS13210 264e24997204dbd0b3839e380534dcae 216 Pfam PF01144 Coenzyme A transferase 5 179 2.1E-37 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS13210 264e24997204dbd0b3839e380534dcae 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 204 1.7E-92 T 29-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AM460_RS13210 264e24997204dbd0b3839e380534dcae 216 SUPERFAMILY SSF100950 2 211 1.06E-67 T 29-03-2018 AM460_RS13210 264e24997204dbd0b3839e380534dcae 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 29-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS13210 264e24997204dbd0b3839e380534dcae 216 Gene3D G3DSA:3.40.1080.10 2 210 2.4E-64 T 29-03-2018 AM460_RS12295 fa222482af6feb5e60ac7d947ec8db4b 277 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 80 121 - T 29-03-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AM460_RS12295 fa222482af6feb5e60ac7d947ec8db4b 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 27 272 5.7E-106 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AM460_RS12295 fa222482af6feb5e60ac7d947ec8db4b 277 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 27 274 6.5E-162 T 29-03-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM460_RS12295 fa222482af6feb5e60ac7d947ec8db4b 277 Pfam PF01048 Phosphorylase superfamily 27 273 9.4E-42 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS12295 fa222482af6feb5e60ac7d947ec8db4b 277 SUPERFAMILY SSF53167 9 275 7.65E-84 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS12295 fa222482af6feb5e60ac7d947ec8db4b 277 PIRSF PIRSF000477 1 276 1.6E-119 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AM460_RS12295 fa222482af6feb5e60ac7d947ec8db4b 277 Gene3D G3DSA:3.40.50.1580 11 276 1.2E-57 T 29-03-2018 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 2.7E-8 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Gene3D G3DSA:3.40.50.970 793 1168 5.1E-104 T 29-03-2018 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 6.9E-82 T 29-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 SMART SM00890 622 679 4.1E-29 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 1.1E-9 T 29-03-2018 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Pfam PF10371 Domain of unknown function 626 678 6.1E-23 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 SUPERFAMILY SSF53323 419 668 1.44E-76 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Gene3D G3DSA:3.40.50.970 1 254 1.6E-48 T 29-03-2018 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Gene3D G3DSA:3.30.70.20 669 791 1.0E-29 T 29-03-2018 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS17865 b14f75f54e62157b616193adda201672 1174 SUPERFAMILY SSF52518 2 254 6.47E-72 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS17865 b14f75f54e62157b616193adda201672 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Gene3D G3DSA:3.40.50.920 255 417 1.9E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 PIRSF PIRSF000159 1 1174 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 SUPERFAMILY SSF52922 256 411 1.57E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 3.8E-34 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Gene3D G3DSA:3.40.920.10 418 623 8.0E-55 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 SUPERFAMILY SSF52518 794 1166 1.5E-118 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Gene3D G3DSA:4.10.780.10 634 668 2.2E-15 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 SUPERFAMILY SSF54862 665 838 6.7E-23 T 29-03-2018 AM460_RS17865 b14f75f54e62157b616193adda201672 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 2.0E-15 T 29-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AM460_RS09310 d3e155df63b4b26d95a6a761b36e6453 91 SUPERFAMILY SSF111148 1 90 1.44E-40 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM460_RS09310 d3e155df63b4b26d95a6a761b36e6453 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.992 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM460_RS09310 d3e155df63b4b26d95a6a761b36e6453 91 PIRSF PIRSF029827 1 90 1.6E-44 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM460_RS09310 d3e155df63b4b26d95a6a761b36e6453 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 1.8E-40 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM460_RS09310 d3e155df63b4b26d95a6a761b36e6453 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM460_RS09310 d3e155df63b4b26d95a6a761b36e6453 91 Gene3D G3DSA:1.10.3880.10 2 89 7.8E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 SMART SM00271 204 269 5.2E-17 T 29-03-2018 IPR001623 DnaJ domain AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 PRINTS PR00625 DnaJ domain signature 207 225 1.7E-7 T 29-03-2018 IPR001623 DnaJ domain AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 PRINTS PR00625 DnaJ domain signature 249 269 1.7E-7 T 29-03-2018 IPR001623 DnaJ domain AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 PRINTS PR00625 DnaJ domain signature 225 240 1.7E-7 T 29-03-2018 IPR001623 DnaJ domain AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 270 38.978 T 29-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 Pfam PF00226 DnaJ domain 208 267 7.4E-11 T 29-03-2018 IPR001623 DnaJ domain AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 Gene3D G3DSA:1.10.3680.10 41 171 6.3E-24 T 29-03-2018 IPR029024 TerB-like AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 Gene3D G3DSA:1.10.287.110 172 269 4.9E-16 T 29-03-2018 IPR001623 DnaJ domain AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 Pfam PF05099 Tellurite resistance protein TerB 47 170 5.0E-10 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AM460_RS26125 4b7eda950acf139d8e6a59b38d8bb1e9 271 SUPERFAMILY SSF46565 131 267 3.24E-31 T 29-03-2018 IPR001623 DnaJ domain AM460_RS22880 dde57c4ad459591c98f5c799781c09f6 225 Pfam PF00072 Response regulator receiver domain 4 112 2.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS22880 dde57c4ad459591c98f5c799781c09f6 225 SMART SM00862 147 223 2.1E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS22880 dde57c4ad459591c98f5c799781c09f6 225 Gene3D G3DSA:3.40.50.2300 1 120 1.9E-35 T 29-03-2018 AM460_RS22880 dde57c4ad459591c98f5c799781c09f6 225 SMART SM00448 2 112 2.4E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS22880 dde57c4ad459591c98f5c799781c09f6 225 SUPERFAMILY SSF52172 3 176 1.57E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS22880 dde57c4ad459591c98f5c799781c09f6 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 7.5E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS22880 dde57c4ad459591c98f5c799781c09f6 225 Gene3D G3DSA:1.10.10.10 121 225 3.1E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09810 c6376e4d5702937a559a634b1b5573fe 541 Gene3D G3DSA:3.40.50.720 240 440 0.005 T 29-03-2018 AM460_RS09810 c6376e4d5702937a559a634b1b5573fe 541 Gene3D G3DSA:3.40.50.20 104 203 3.0E-5 T 29-03-2018 AM460_RS09810 c6376e4d5702937a559a634b1b5573fe 541 SUPERFAMILY SSF53187 407 489 2.09E-6 T 29-03-2018 AM460_RS09810 c6376e4d5702937a559a634b1b5573fe 541 Pfam PF13478 XdhC Rossmann domain 106 247 3.3E-31 T 29-03-2018 IPR027051 XdhC Rossmann domain AM460_RS09810 c6376e4d5702937a559a634b1b5573fe 541 Gene3D G3DSA:2.40.50.100 441 498 4.3E-4 T 29-03-2018 AM460_RS09810 c6376e4d5702937a559a634b1b5573fe 541 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 4.9E-126 T 29-03-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family AM460_RS09810 c6376e4d5702937a559a634b1b5573fe 541 Pfam PF02625 XdhC and CoxI family 12 73 2.6E-16 T 29-03-2018 IPR003777 XdhC- CoxI AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 Gene3D G3DSA:1.10.10.60 132 178 1.2E-6 T 29-03-2018 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 Gene3D G3DSA:3.40.50.1390 1 106 8.2E-37 T 29-03-2018 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 Gene3D G3DSA:1.20.5.40 107 131 2.7E-20 T 29-03-2018 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 SUPERFAMILY SSF53041 1 135 1.83E-47 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 SUPERFAMILY SSF46689 138 181 8.51E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 Pfam PF00239 Resolvase, N terminal domain 3 135 3.6E-49 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 Pfam PF02796 Helix-turn-helix domain of resolvase 138 180 3.2E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 SMART SM00857 2 136 2.4E-62 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS00225 b7012ce0fc86b66b5cf39222558595dc 190 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 Gene3D G3DSA:1.10.10.60 132 178 1.2E-6 T 29-03-2018 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 Gene3D G3DSA:3.40.50.1390 1 106 8.2E-37 T 29-03-2018 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 Gene3D G3DSA:1.20.5.40 107 131 2.7E-20 T 29-03-2018 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 SUPERFAMILY SSF53041 1 135 1.83E-47 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 SUPERFAMILY SSF46689 138 181 8.51E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 Pfam PF00239 Resolvase, N terminal domain 3 135 3.6E-49 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 Pfam PF02796 Helix-turn-helix domain of resolvase 138 180 3.2E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 SMART SM00857 2 136 2.4E-62 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21255 b7012ce0fc86b66b5cf39222558595dc 190 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 Gene3D G3DSA:1.10.4030.10 178 232 7.2E-4 T 29-03-2018 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 Gene3D G3DSA:1.10.4030.10 38 170 2.2E-25 T 29-03-2018 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 SUPERFAMILY SSF109998 203 240 5.76E-38 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 SUPERFAMILY SSF109998 39 169 5.76E-38 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 Gene3D G3DSA:3.10.50.40 379 496 6.7E-9 T 29-03-2018 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 Gene3D G3DSA:3.10.50.40 233 378 2.2E-33 T 29-03-2018 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 Pfam PF13145 PPIC-type PPIASE domain 247 369 3.2E-24 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 SUPERFAMILY SSF54534 225 355 3.34E-23 T 29-03-2018 AM460_RS24160 fea0a110ac3fd327287e4729ac1e557e 623 Pfam PF13624 SurA N-terminal domain 1 165 1.9E-54 T 29-03-2018 AM460_RS22955 a12bae00ccdf7f1cfa0380e298d00670 328 SUPERFAMILY SSF53659 4 326 3.68E-107 T 29-03-2018 AM460_RS22955 a12bae00ccdf7f1cfa0380e298d00670 328 Gene3D G3DSA:3.40.718.10 1 328 8.3E-125 T 29-03-2018 AM460_RS22955 a12bae00ccdf7f1cfa0380e298d00670 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 325 6.8E-111 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS22955 a12bae00ccdf7f1cfa0380e298d00670 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 326 34.824 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS22955 a12bae00ccdf7f1cfa0380e298d00670 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 2.8E-102 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS19275 61396f80769fcc40607fdfb4b62bd3ed 340 SUPERFAMILY SSF53807 43 307 3.06E-36 T 29-03-2018 AM460_RS19275 61396f80769fcc40607fdfb4b62bd3ed 340 Pfam PF01497 Periplasmic binding protein 55 278 1.4E-18 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS19275 61396f80769fcc40607fdfb4b62bd3ed 340 Gene3D G3DSA:3.40.50.1980 156 326 1.0E-23 T 29-03-2018 AM460_RS19275 61396f80769fcc40607fdfb4b62bd3ed 340 Gene3D G3DSA:3.40.50.1980 34 155 1.2E-12 T 29-03-2018 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 SMART SM00342 207 290 1.1E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 Gene3D G3DSA:2.60.120.10 23 250 9.5E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 Pfam PF12833 Helix-turn-helix domain 214 291 7.8E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 SUPERFAMILY SSF47454 129 186 6.8E-12 T 29-03-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 Gene3D G3DSA:1.10.10.60 251 301 3.6E-13 T 29-03-2018 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 SUPERFAMILY SSF46689 243 291 8.51E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02230 077dd1cf25ce43971c9644b87674dca7 302 SUPERFAMILY SSF51182 36 109 8.19E-7 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS18875 6ed99991e9462665bf809039af43ddd9 337 SMART SM00448 8 120 1.3E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS18875 6ed99991e9462665bf809039af43ddd9 337 SUPERFAMILY SSF52172 8 144 8.4E-32 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS18875 6ed99991e9462665bf809039af43ddd9 337 Gene3D G3DSA:3.40.50.2300 6 297 9.4E-33 T 29-03-2018 AM460_RS18875 6ed99991e9462665bf809039af43ddd9 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.218 T 29-03-2018 IPR028616 Regulator of RpoS AM460_RS18875 6ed99991e9462665bf809039af43ddd9 337 Pfam PF00072 Response regulator receiver domain 10 120 2.7E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:3.30.70.940 6 119 8.2E-42 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.812 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF00467 KOW motif 130 162 5.5E-8 T 29-03-2018 IPR005824 KOW AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF50104 125 180 4.66E-20 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 2.8E-71 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00739 127 154 7.9E-7 T 29-03-2018 IPR005824 KOW AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00738 6 115 8.6E-51 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 29-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AM460_RS03140 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:2.30.30.30 122 181 4.8E-22 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82714 703 785 5.23E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.115 T 29-03-2018 IPR023931 Multidrug resistance protein MdtC AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Gene3D G3DSA:3.30.70.1430 40 142 2.1E-25 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82866 813 1010 2.75E-43 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82693 136 182 5.49E-23 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82693 268 324 5.49E-23 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82693 40 135 4.19E-23 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82693 788 833 6.1E-6 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82693 663 701 6.1E-6 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 5.7E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Gene3D G3DSA:3.30.2090.10 701 788 2.2E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Gene3D G3DSA:3.30.70.1430 557 652 3.1E-15 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Gene3D G3DSA:3.30.2090.10 181 269 1.4E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82693 555 650 3.53E-19 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Gene3D G3DSA:1.20.1640.10 801 1022 3.5E-36 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 Gene3D G3DSA:1.20.1640.10 281 503 1.0E-48 T 29-03-2018 AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82714 183 266 5.1E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13980 d650e4e8955e2120712ff39b8ea3d1fe 1025 SUPERFAMILY SSF82866 291 490 1.12E-48 T 29-03-2018 AM460_RS04005 574c290bd143386d0ef752e12673806a 281 SUPERFAMILY SSF46689 6 79 1.63E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS04005 574c290bd143386d0ef752e12673806a 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 77 6.4E-22 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM460_RS04005 574c290bd143386d0ef752e12673806a 281 SUPERFAMILY SSF53697 103 269 3.03E-33 T 29-03-2018 AM460_RS04005 574c290bd143386d0ef752e12673806a 281 Gene3D G3DSA:1.10.10.10 2 83 2.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04005 574c290bd143386d0ef752e12673806a 281 Pfam PF01380 SIS domain 126 255 3.9E-20 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS04005 574c290bd143386d0ef752e12673806a 281 Gene3D G3DSA:3.40.50.10490 86 273 3.3E-28 T 29-03-2018 AM460_RS00155 209ab2b375d36ccfd02e55f0146093fc 108 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-40 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM460_RS00155 209ab2b375d36ccfd02e55f0146093fc 108 SUPERFAMILY SSF48295 5 105 9.42E-30 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM460_RS00155 209ab2b375d36ccfd02e55f0146093fc 108 TIGRFAM TIGR01321 TrpR: trp operon repressor 11 103 1.2E-42 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM460_RS00155 209ab2b375d36ccfd02e55f0146093fc 108 Gene3D G3DSA:1.10.1270.10 8 108 1.7E-28 T 29-03-2018 AM460_RS00155 209ab2b375d36ccfd02e55f0146093fc 108 Pfam PF01371 Trp repressor protein 17 102 3.3E-28 T 29-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AM460_RS00155 209ab2b375d36ccfd02e55f0146093fc 108 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.062 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM460_RS00155 209ab2b375d36ccfd02e55f0146093fc 108 PIRSF PIRSF003196 3 108 2.5E-40 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 SUPERFAMILY SSF90123 8 325 3.01E-75 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 Gene3D G3DSA:3.40.50.300 329 582 1.1E-78 T 29-03-2018 AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 Gene3D G3DSA:1.20.1560.10 1 328 7.7E-67 T 29-03-2018 AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.0E-275 T 29-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 Pfam PF00005 ABC transporter 359 509 1.6E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 SUPERFAMILY SSF52540 332 580 1.04E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 SMART SM00382 368 555 1.4E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS20950 e440a509009f132cc0ec21378fd115bc 582 Pfam PF00664 ABC transporter transmembrane region 27 297 2.9E-61 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS26785 c8c327befbbb761931dc27621b6dd4c0 166 Pfam PF07275 Antirestriction protein (ArdA) 8 163 5.0E-30 T 29-03-2018 IPR009899 Antirestriction AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 Gene3D G3DSA:3.30.70.120 1 108 1.1E-45 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 SMART SM00938 4 105 6.4E-61 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 PIRSF PIRSF039144 1 112 7.5E-53 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS24115 2c10f8c51446d7159794c9595ed25026 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.0E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS12145 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 5.7E-101 T 29-03-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 AM460_RS12145 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 PIRSF PIRSF012290 1 219 2.3E-85 T 29-03-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 AM460_RS12145 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 SMART SM00877 146 219 2.9E-7 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12145 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 SMART SM00877 35 132 7.1E-4 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12145 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 SUPERFAMILY SSF143414 158 211 6.15E-6 T 29-03-2018 AM460_RS12145 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 Pfam PF00936 BMC domain 36 107 3.0E-11 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12145 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 Pfam PF00936 BMC domain 160 208 1.9E-6 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS20530 2fcbbff795c8a1cb1e6356ae3c1ab064 442 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 1 428 4.2E-255 T 29-03-2018 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 AM460_RS20530 2fcbbff795c8a1cb1e6356ae3c1ab064 442 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 424 2.6E-119 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS20530 2fcbbff795c8a1cb1e6356ae3c1ab064 442 Pfam PF00860 Permease family 31 401 9.4E-104 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS20530 2fcbbff795c8a1cb1e6356ae3c1ab064 442 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS10845 262c6389889617e47bffeeb8fe293df5 370 Gene3D G3DSA:1.10.3090.10 9 215 1.5E-13 T 29-03-2018 AM460_RS10845 262c6389889617e47bffeeb8fe293df5 370 Pfam PF13671 AAA domain 226 355 1.4E-22 T 29-03-2018 AM460_RS10845 262c6389889617e47bffeeb8fe293df5 370 SUPERFAMILY SSF109604 32 165 4.54E-11 T 29-03-2018 AM460_RS10845 262c6389889617e47bffeeb8fe293df5 370 SUPERFAMILY SSF52540 221 365 2.24E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10845 262c6389889617e47bffeeb8fe293df5 370 Gene3D G3DSA:3.40.50.300 224 361 1.1E-13 T 29-03-2018 AM460_RS07515 336b4f05a160e5cc79e6d8ece23f9828 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM460_RS07515 336b4f05a160e5cc79e6d8ece23f9828 323 Pfam PF00348 Polyprenyl synthetase 30 263 2.3E-77 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM460_RS07515 336b4f05a160e5cc79e6d8ece23f9828 323 SUPERFAMILY SSF48576 6 322 5.76E-101 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM460_RS07515 336b4f05a160e5cc79e6d8ece23f9828 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM460_RS07515 336b4f05a160e5cc79e6d8ece23f9828 323 Gene3D G3DSA:1.10.600.10 1 323 3.5E-105 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 Gene3D G3DSA:3.30.465.10 69 218 9.7E-49 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 SUPERFAMILY SSF56194 202 339 1.44E-50 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 1.3E-131 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 SUPERFAMILY SSF56176 3 197 2.25E-50 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 Pfam PF01565 FAD binding domain 18 149 8.2E-27 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 Gene3D G3DSA:3.30.43.10 3 68 4.9E-21 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 329 1.1E-33 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 Gene3D G3DSA:3.90.78.10 221 334 1.1E-40 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03195 ab1b9bfa84eef9673dd22f37fd227d34 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 90.71 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF55781 2 159 3.27E-30 T 29-03-2018 IPR029016 GAF domain-like AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 2.3E-125 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 1.3E-23 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF52009 293 413 1.57E-25 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 2.1E-15 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.50.30.10 304 419 3.0E-18 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 SMART SM00065 17 164 8.2E-29 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF51621 419 715 4.71E-97 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.20.20.60 420 739 1.2E-86 T 29-03-2018 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF47831 197 309 3.92E-26 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.30.450.40 1 173 4.8E-29 T 29-03-2018 IPR029016 GAF domain-like AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:1.10.274.10 195 303 4.1E-29 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 5.2E-110 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF01590 GAF domain 18 152 6.2E-15 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.1E-24 T 29-03-2018 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.1E-24 T 29-03-2018 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.1E-24 T 29-03-2018 AM460_RS09955 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.1E-24 T 29-03-2018 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 Gene3D G3DSA:3.40.50.2030 235 375 3.2E-63 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 5.4E-156 T 29-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 Gene3D G3DSA:3.40.50.2030 376 550 9.0E-59 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.641 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 Gene3D G3DSA:1.20.1270.20 1 147 2.4E-36 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 SUPERFAMILY SSF56821 1 548 3.27E-190 T 29-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 Gene3D G3DSA:1.20.1270.20 150 232 7.2E-21 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 6.8E-231 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS21935 b189f185f54fa5a1d7ae0c85e28d6b80 550 PIRSF PIRSF000076 1 550 2.8E-241 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF53623 95 308 1.44E-48 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.90.190.20 313 451 2.5E-27 T 29-03-2018 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 2.3E-276 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.8E-20 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF08245 Mur ligase middle domain 108 291 2.6E-18 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.40.1190.10 91 312 2.0E-37 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF53244 312 447 4.45E-37 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.40.50.720 1 90 1.5E-13 T 29-03-2018 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF51984 1 90 1.31E-24 T 29-03-2018 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.577 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM460_RS01535 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 361 7.4E-10 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS23320 1dd4c61ec2fa3294ec4178d5efb57095 292 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 3 292 182.564 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM460_RS23320 1dd4c61ec2fa3294ec4178d5efb57095 292 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 26 290 3.6E-82 T 29-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM460_RS23320 1dd4c61ec2fa3294ec4178d5efb57095 292 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 21 291 1.0E-108 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM460_RS04470 9d52fca8512dfcc5438b41ae18e193ae 330 Gene3D G3DSA:3.30.930.10 1 328 4.5E-39 T 29-03-2018 AM460_RS04470 9d52fca8512dfcc5438b41ae18e193ae 330 SUPERFAMILY SSF55681 7 329 1.35E-98 T 29-03-2018 AM460_RS04470 9d52fca8512dfcc5438b41ae18e193ae 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 2.5E-93 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM460_RS04470 9d52fca8512dfcc5438b41ae18e193ae 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.2E-200 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM460_RS04470 9d52fca8512dfcc5438b41ae18e193ae 330 PIRSF PIRSF001555 1 329 9.8E-152 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM460_RS04470 9d52fca8512dfcc5438b41ae18e193ae 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.169 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 Gene3D G3DSA:3.30.2090.10 180 275 6.0E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 Gene3D G3DSA:3.30.70.1430 569 670 5.0E-21 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 Gene3D G3DSA:1.20.1640.10 287 510 1.1E-44 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1048 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.4E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82866 296 497 1.7E-48 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82714 725 812 2.49E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 Gene3D G3DSA:1.20.1640.10 827 1033 5.7E-38 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 Gene3D G3DSA:3.30.70.1440 674 771 2.6E-20 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82866 809 1033 9.29E-45 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82714 182 271 5.1E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82693 135 182 4.13E-27 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82693 274 330 4.13E-27 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82693 38 132 1.46E-27 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 Gene3D G3DSA:3.30.70.1430 38 140 1.2E-29 T 29-03-2018 AM460_RS24055 2bf30d931dc006d1eeb05f15a1cebeea 1049 SUPERFAMILY SSF82693 567 671 1.57E-33 T 29-03-2018 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 SUPERFAMILY SSF63411 504 728 1.55E-48 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 9.8E-39 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 SUPERFAMILY SSF63411 265 502 1.75E-66 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Gene3D G3DSA:3.30.830.10 722 962 1.6E-42 T 29-03-2018 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 SUPERFAMILY SSF63411 33 261 7.14E-51 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Gene3D G3DSA:3.30.830.10 517 721 9.3E-17 T 29-03-2018 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 SUPERFAMILY SSF63411 735 957 3.14E-45 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Pfam PF05193 Peptidase M16 inactive domain 216 394 5.7E-21 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Pfam PF05193 Peptidase M16 inactive domain 681 856 6.9E-14 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Gene3D G3DSA:3.30.830.10 272 502 3.0E-58 T 29-03-2018 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Gene3D G3DSA:3.30.830.10 21 268 5.7E-72 T 29-03-2018 AM460_RS09995 65b6e838b2f0967d5e2d233e2084d0ac 962 Pfam PF16187 Middle or third domain of peptidase_M16 400 676 6.4E-54 T 29-03-2018 IPR032632 Peptidase M16, middle/third domain AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Gene3D G3DSA:3.90.1340.10 472 525 6.1E-20 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF07484 Phage Tail Collar Domain 483 530 2.5E-14 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Gene3D G3DSA:2.10.280.10 248 293 0.015 T 29-03-2018 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Gene3D G3DSA:2.10.280.10 148 193 0.01 T 29-03-2018 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF03406 Phage tail fibre repeat 381 419 1.2E-17 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF03406 Phage tail fibre repeat 125 165 6.0E-18 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF03406 Phage tail fibre repeat 225 265 6.0E-18 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF03406 Phage tail fibre repeat 325 363 1.4E-17 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF03406 Phage tail fibre repeat 169 207 2.4E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF03406 Phage tail fibre repeat 269 307 2.4E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Pfam PF03406 Phage tail fibre repeat 69 107 2.0E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 Gene3D G3DSA:4.10.1070.10 526 632 3.2E-18 T 29-03-2018 AM460_RS00245 84917650432e49c1146f6f9f532911eb 640 SUPERFAMILY SSF88874 473 639 1.12E-35 T 29-03-2018 AM460_RS28010 9c8719342f11531d6016ad0781a954d8 243 Pfam PF05818 Enterobacterial TraT complement resistance protein 32 243 1.3E-81 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 AM460_RS28010 9c8719342f11531d6016ad0781a954d8 243 PIRSF PIRSF002859 1 243 2.4E-154 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 AM460_RS27430 9c8719342f11531d6016ad0781a954d8 243 Pfam PF05818 Enterobacterial TraT complement resistance protein 32 243 1.3E-81 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 AM460_RS27430 9c8719342f11531d6016ad0781a954d8 243 PIRSF PIRSF002859 1 243 2.4E-154 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 4 463 1.4E-253 T 29-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 SUPERFAMILY SSF53067 5 252 1.12E-60 T 29-03-2018 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 Hamap MF_00986 L-fuculokinase [fucK]. 3 464 62.43 T 29-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 1.7E-87 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 1.8E-21 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 Gene3D G3DSA:3.30.420.40 246 470 2.0E-38 T 29-03-2018 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 PIRSF PIRSF000538 3 472 4.0E-84 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 Gene3D G3DSA:3.30.420.40 1 245 1.4E-59 T 29-03-2018 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS10255 7db5f7adfcd1d7d32ed73c188ebaa311 472 SUPERFAMILY SSF53067 254 467 4.05E-41 T 29-03-2018 AM460_RS26220 0de6d153e349b651976d49f98cfc7726 405 Hamap MF_01050 L-carnitine CoA-transferase [caiB]. 1 405 99.492 T 29-03-2018 IPR023452 L-carnitine CoA-transferase CaiB GO:0009437|GO:0016782 AM460_RS26220 0de6d153e349b651976d49f98cfc7726 405 SUPERFAMILY SSF89796 5 401 4.84E-100 T 29-03-2018 IPR023606 CoA-transferase family III domain AM460_RS26220 0de6d153e349b651976d49f98cfc7726 405 Pfam PF02515 CoA-transferase family III 12 378 6.4E-79 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM460_RS26220 0de6d153e349b651976d49f98cfc7726 405 Gene3D G3DSA:3.40.50.10540 6 405 1.1E-83 T 29-03-2018 IPR023606 CoA-transferase family III domain AM460_RS09460 ae0be99beb547c04624d8e2d28047874 306 PIRSF PIRSF036979 12 304 8.2E-102 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM460_RS09460 ae0be99beb547c04624d8e2d28047874 306 Pfam PF00491 Arginase family 34 297 9.5E-86 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM460_RS09460 ae0be99beb547c04624d8e2d28047874 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 9.6E-119 T 29-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM460_RS09460 ae0be99beb547c04624d8e2d28047874 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.558 T 29-03-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 AM460_RS09460 ae0be99beb547c04624d8e2d28047874 306 SUPERFAMILY SSF52768 13 301 4.5E-91 T 29-03-2018 AM460_RS09460 ae0be99beb547c04624d8e2d28047874 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM460_RS09460 ae0be99beb547c04624d8e2d28047874 306 Gene3D G3DSA:3.40.800.10 4 306 7.2E-93 T 29-03-2018 AM460_RS20810 71b5d725e30fc27fe3de12b5148455da 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 40.085 T 29-03-2018 IPR009809 Cell division protein ZapC AM460_RS20810 71b5d725e30fc27fe3de12b5148455da 180 PIRSF PIRSF010252 1 179 6.0E-67 T 29-03-2018 IPR009809 Cell division protein ZapC AM460_RS20810 71b5d725e30fc27fe3de12b5148455da 180 Pfam PF07126 Cell-division protein ZapC 3 168 2.5E-66 T 29-03-2018 IPR009809 Cell division protein ZapC AM460_RS16065 4ca9455a979dea054eaa543659ece87b 496 Gene3D G3DSA:3.30.70.270 337 496 1.8E-35 T 29-03-2018 AM460_RS16065 4ca9455a979dea054eaa543659ece87b 496 SUPERFAMILY SSF55073 349 495 1.88E-32 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS16065 4ca9455a979dea054eaa543659ece87b 496 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 495 1.2E-35 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16065 4ca9455a979dea054eaa543659ece87b 496 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 494 1.7E-39 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16065 4ca9455a979dea054eaa543659ece87b 496 SMART SM00267 333 496 2.9E-46 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16065 4ca9455a979dea054eaa543659ece87b 496 Gene3D G3DSA:3.30.450.20 58 252 6.0E-6 T 29-03-2018 AM460_RS16065 4ca9455a979dea054eaa543659ece87b 496 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 31 304 3.5E-149 T 29-03-2018 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 AM460_RS25120 b2e11dccedefa224f601e45dedbf288f 307 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 21 70 4.8E-14 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain AM460_RS25120 b2e11dccedefa224f601e45dedbf288f 307 Gene3D G3DSA:3.30.1330.60 100 298 1.0E-27 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS25120 b2e11dccedefa224f601e45dedbf288f 307 Pfam PF00691 OmpA family 166 258 1.9E-14 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS25120 b2e11dccedefa224f601e45dedbf288f 307 SUPERFAMILY SSF103088 152 268 4.45E-18 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 Gene3D G3DSA:3.90.1150.10 245 354 2.8E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 352 1.5E-127 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 355 55.363 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 SUPERFAMILY SSF53383 8 352 1.75E-82 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 Pfam PF00155 Aminotransferase class I and II 46 351 5.9E-68 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 Gene3D G3DSA:3.40.640.10 67 244 2.9E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS14170 880415537dd8d58515f8c03705e93beb 356 Gene3D G3DSA:3.90.1150.10 5 66 2.4E-5 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS13395 01c2339d00a1f333a43a8aa4845ab337 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 1.7E-24 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM460_RS13395 01c2339d00a1f333a43a8aa4845ab337 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 24.867 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM460_RS13395 01c2339d00a1f333a43a8aa4845ab337 75 Gene3D G3DSA:1.10.3390.10 2 71 5.8E-36 T 29-03-2018 IPR023202 YejL-like domain AM460_RS13395 01c2339d00a1f333a43a8aa4845ab337 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 4.0E-33 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM460_RS13395 01c2339d00a1f333a43a8aa4845ab337 75 PIRSF PIRSF006188 1 72 1.1E-38 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM460_RS13395 01c2339d00a1f333a43a8aa4845ab337 75 SUPERFAMILY SSF158651 1 75 2.22E-32 T 29-03-2018 IPR023202 YejL-like domain AM460_RS07685 dd664686f4a27bee92a86962695ef215 100 Pfam PF01541 GIY-YIG catalytic domain 4 75 4.1E-13 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS07685 dd664686f4a27bee92a86962695ef215 100 Gene3D G3DSA:3.40.1440.10 2 94 1.4E-5 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS07685 dd664686f4a27bee92a86962695ef215 100 SUPERFAMILY SSF82771 3 72 3.4E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS07685 dd664686f4a27bee92a86962695ef215 100 SMART SM00465 2 81 7.8E-4 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS07685 dd664686f4a27bee92a86962695ef215 100 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 1 92 32.641 T 29-03-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 SMART SM00922 114 209 1.2E-11 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 Pfam PF13378 Enolase C-terminal domain-like 124 280 1.4E-16 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 SUPERFAMILY SSF54826 1 97 5.5E-30 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 319 22.739 T 29-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 Gene3D G3DSA:3.30.390.10 1 109 7.1E-19 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 6.1E-133 T 29-03-2018 AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 Gene3D G3DSA:3.20.20.120 110 294 1.4E-40 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS13015 d8a2e41ef66dc57bc3f8af8ddf60e634 320 SUPERFAMILY SSF51604 104 304 3.54E-50 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS27165 9a171af6318dc45b0a07e94c4050a370 188 Pfam PF00436 Single-strand binding protein family 19 123 1.6E-38 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM460_RS27165 9a171af6318dc45b0a07e94c4050a370 188 Gene3D G3DSA:2.40.50.140 14 132 5.7E-43 T 29-03-2018 AM460_RS27165 9a171af6318dc45b0a07e94c4050a370 188 SUPERFAMILY SSF50249 17 188 1.13E-55 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS27165 9a171af6318dc45b0a07e94c4050a370 188 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 16 188 2.3E-56 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS27165 9a171af6318dc45b0a07e94c4050a370 188 PIRSF PIRSF002070 15 180 6.9E-38 T 29-03-2018 AM460_RS27165 9a171af6318dc45b0a07e94c4050a370 188 Hamap MF_00984 Single-stranded DNA-binding protein. 19 129 37.779 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS25445 75b8e7871c67938515ee3f14a5c26b15 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.437 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM460_RS25445 75b8e7871c67938515ee3f14a5c26b15 185 Pfam PF01765 Ribosome recycling factor 20 183 2.7E-63 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM460_RS25445 75b8e7871c67938515ee3f14a5c26b15 185 Gene3D G3DSA:1.10.132.20 2 74 1.5E-9 T 29-03-2018 AM460_RS25445 75b8e7871c67938515ee3f14a5c26b15 185 Gene3D G3DSA:1.10.132.20 75 184 7.9E-37 T 29-03-2018 AM460_RS25445 75b8e7871c67938515ee3f14a5c26b15 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.0E-81 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM460_RS25445 75b8e7871c67938515ee3f14a5c26b15 185 SUPERFAMILY SSF55194 2 184 2.09E-71 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM460_RS08470 b38a1bb03df875505eacebc17e30cf89 338 SUPERFAMILY SSF51735 138 302 8.42E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS08470 b38a1bb03df875505eacebc17e30cf89 338 Gene3D G3DSA:3.90.180.10 1 158 2.8E-47 T 29-03-2018 AM460_RS08470 b38a1bb03df875505eacebc17e30cf89 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 1.2E-29 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS08470 b38a1bb03df875505eacebc17e30cf89 338 Gene3D G3DSA:3.40.50.720 159 282 1.9E-23 T 29-03-2018 AM460_RS08470 b38a1bb03df875505eacebc17e30cf89 338 Pfam PF00107 Zinc-binding dehydrogenase 171 297 1.1E-19 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS08470 b38a1bb03df875505eacebc17e30cf89 338 SUPERFAMILY SSF50129 1 170 8.07E-48 T 29-03-2018 IPR011032 GroES-like AM460_RS21955 430cfce112245b0ddb2f6ba27c439db5 476 Pfam PF13460 NAD(P)H-binding 9 158 1.1E-15 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS21955 430cfce112245b0ddb2f6ba27c439db5 476 Gene3D G3DSA:3.30.530.20 325 476 2.3E-5 T 29-03-2018 IPR023393 START-like domain AM460_RS21955 430cfce112245b0ddb2f6ba27c439db5 476 Pfam PF11066 Protein of unknown function (DUF2867) 331 463 9.9E-12 T 29-03-2018 IPR021295 Protein of unknown function DUF2867 AM460_RS21955 430cfce112245b0ddb2f6ba27c439db5 476 Gene3D G3DSA:3.40.50.720 2 312 8.8E-28 T 29-03-2018 AM460_RS21955 430cfce112245b0ddb2f6ba27c439db5 476 SUPERFAMILY SSF51735 3 294 5.2E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS21955 430cfce112245b0ddb2f6ba27c439db5 476 SUPERFAMILY SSF55961 333 473 9.16E-6 T 29-03-2018 AM460_RS08345 1a78793fdbf2ad46c261d9c79cf4431f 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 5.4E-21 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS08345 1a78793fdbf2ad46c261d9c79cf4431f 275 Gene3D G3DSA:3.60.21.10 7 272 1.8E-42 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS08345 1a78793fdbf2ad46c261d9c79cf4431f 275 SUPERFAMILY SSF56300 16 269 1.26E-61 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS08345 1a78793fdbf2ad46c261d9c79cf4431f 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 43.006 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AM460_RS08345 1a78793fdbf2ad46c261d9c79cf4431f 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 9.0E-27 T 29-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AM460_RS16625 b567ee8e067816f252ad8406f27ad58e 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 1.1E-68 T 29-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM460_RS16625 b567ee8e067816f252ad8406f27ad58e 495 SUPERFAMILY SSF101960 41 86 1.05E-136 T 29-03-2018 AM460_RS16625 b567ee8e067816f252ad8406f27ad58e 495 SUPERFAMILY SSF101960 125 492 1.05E-136 T 29-03-2018 AM460_RS16625 b567ee8e067816f252ad8406f27ad58e 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 1.2E-193 T 29-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AM460_RS19590 fdcbf2d80257e2edb623d8d1c81259f4 673 SUPERFAMILY SSF49464 5 81 2.28E-6 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain AM460_RS19590 fdcbf2d80257e2edb623d8d1c81259f4 673 Gene3D G3DSA:2.60.120.200 516 673 4.4E-8 T 29-03-2018 AM460_RS19590 fdcbf2d80257e2edb623d8d1c81259f4 673 SUPERFAMILY SSF49899 521 671 1.33E-5 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM460_RS19590 fdcbf2d80257e2edb623d8d1c81259f4 673 Gene3D G3DSA:2.60.120.260 318 499 2.0E-9 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19590 fdcbf2d80257e2edb623d8d1c81259f4 673 Gene3D G3DSA:2.60.40.1120 1 89 1.0E-7 T 29-03-2018 AM460_RS19590 fdcbf2d80257e2edb623d8d1c81259f4 673 Pfam PF08400 Prophage tail fibre N-terminal 1 131 1.9E-67 T 29-03-2018 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 PRINTS PR01401 Mutator MutT protein signature 2 23 3.6E-16 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 PRINTS PR01401 Mutator MutT protein signature 77 90 3.6E-16 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 SUPERFAMILY SSF55811 1 127 4.6E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 Gene3D G3DSA:3.90.79.10 1 129 9.4E-30 T 29-03-2018 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 Pfam PF00293 NUDIX domain 5 125 1.3E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 128 7.2E-68 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.6E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS25885 160578b3e730e4f3b71e7638406928ed 132 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.6E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS02250 603c045291906201e96d39c9eee49720 253 Gene3D G3DSA:1.10.10.60 198 253 3.7E-12 T 29-03-2018 AM460_RS02250 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 3.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02250 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 3.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02250 603c045291906201e96d39c9eee49720 253 Pfam PF12833 Helix-turn-helix domain 169 244 1.1E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS02250 603c045291906201e96d39c9eee49720 253 SUPERFAMILY SSF46689 197 248 2.69E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS02250 603c045291906201e96d39c9eee49720 253 SMART SM00342 162 244 5.4E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS02250 603c045291906201e96d39c9eee49720 253 Gene3D G3DSA:1.10.10.60 111 197 0.025 T 29-03-2018 AM460_RS02250 603c045291906201e96d39c9eee49720 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS20010 76d08c8cacbb14514a6d7679d730e710 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 8.5E-12 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM460_RS23765 7abf5047a15c75d20accc0312131b273 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.6E-170 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS23765 7abf5047a15c75d20accc0312131b273 381 SUPERFAMILY SSF110738 1 375 2.62E-136 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS23765 7abf5047a15c75d20accc0312131b273 381 Pfam PF02595 Glycerate kinase family 3 373 9.6E-146 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS23765 7abf5047a15c75d20accc0312131b273 381 PIRSF PIRSF006078 1 376 7.9E-133 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS23765 7abf5047a15c75d20accc0312131b273 381 Gene3D G3DSA:3.90.1510.10 42 276 6.7E-95 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM460_RS00260 f5654abd1877b2f7d03705102419ac5a 115 Pfam PF04965 Gene 25-like lysozyme 21 94 4.8E-11 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM460_RS00260 f5654abd1877b2f7d03705102419ac5a 115 Gene3D G3DSA:3.10.450.40 9 113 3.4E-19 T 29-03-2018 AM460_RS00260 f5654abd1877b2f7d03705102419ac5a 115 SUPERFAMILY SSF160719 16 102 3.79E-22 T 29-03-2018 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00072 Response regulator receiver domain 9 120 8.5E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 9.1E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:1.10.10.10 139 215 4.8E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00448 7 120 3.8E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF46894 146 213 1.36E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:3.40.50.2300 6 138 5.6E-38 T 29-03-2018 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00421 153 210 1.0E-25 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS18970 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF52172 6 135 1.42E-36 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 Gene3D G3DSA:3.20.20.450 478 729 2.6E-67 T 29-03-2018 IPR001633 EAL domain AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 SUPERFAMILY SSF55073 331 442 2.75E-5 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 Pfam PF05231 MASE1 16 314 6.7E-57 T 29-03-2018 IPR007895 MASE1 AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 SMART SM00052 487 729 1.6E-95 T 29-03-2018 IPR001633 EAL domain AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 SMART SM00267 315 473 8.1E-25 T 29-03-2018 IPR000160 GGDEF domain AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 Pfam PF00563 EAL domain 493 724 4.8E-59 T 29-03-2018 IPR001633 EAL domain AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 SUPERFAMILY SSF141868 493 728 1.22E-65 T 29-03-2018 IPR001633 EAL domain AM460_RS12360 8a2ad4f52b585bed6bed81696f939be1 729 Gene3D G3DSA:3.30.70.270 309 468 1.6E-8 T 29-03-2018 AM460_RS18375 a77c70452d1233e87fddcf848f8b2f8b 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.9E-113 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS18375 a77c70452d1233e87fddcf848f8b2f8b 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 29-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS18375 a77c70452d1233e87fddcf848f8b2f8b 268 Gene3D G3DSA:3.20.20.70 2 268 1.9E-72 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS18375 a77c70452d1233e87fddcf848f8b2f8b 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.666 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS18375 a77c70452d1233e87fddcf848f8b2f8b 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 8.0E-102 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM460_RS18375 a77c70452d1233e87fddcf848f8b2f8b 268 SUPERFAMILY SSF51366 1 266 1.88E-91 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 Gene3D G3DSA:3.60.15.10 1 251 4.6E-70 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 2.1E-104 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 SUPERFAMILY SSF56281 1 251 2.36E-69 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 Pfam PF00753 Metallo-beta-lactamase superfamily 12 165 9.6E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 SMART SM00849 11 165 2.4E-39 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 7.4E-22 T 29-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.793 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM460_RS25240 9208ff3a624f80375d016939e7f6b2f5 251 PIRSF PIRSF005457 1 251 5.2E-91 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM460_RS27010 a9d62822b0903a1e0863ee977b979c85 210 Pfam PF12477 Sex factor F TraW protein N terminal 4 30 2.7E-9 T 29-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain AM460_RS27010 a9d62822b0903a1e0863ee977b979c85 210 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 7 202 8.9E-75 T 29-03-2018 IPR014114 Type-F conjugative transfer system protein TraW AM460_RS23155 f4fcaddd17ff2b766b6351ceb163d563 72 Pfam PF08238 Sel1 repeat 49 72 0.0021 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23155 f4fcaddd17ff2b766b6351ceb163d563 72 Pfam PF08238 Sel1 repeat 23 44 4.3E-6 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23155 f4fcaddd17ff2b766b6351ceb163d563 72 SUPERFAMILY SSF81901 24 72 1.96E-13 T 29-03-2018 AM460_RS23155 f4fcaddd17ff2b766b6351ceb163d563 72 Gene3D G3DSA:2.60.40.1180 22 72 2.7E-16 T 29-03-2018 AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.333 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 29-03-2018 AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 1.7E-51 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF109635 9 109 1.07E-37 T 29-03-2018 AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 2.4E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS25600 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.19 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 SUPERFAMILY SSF53748 3 383 8.01E-145 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 29-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 Pfam PF00162 Phosphoglycerate kinase 6 373 6.3E-140 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 Gene3D G3DSA:3.40.50.1260 3 174 2.8E-61 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 PIRSF PIRSF000724 1 387 1.6E-134 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09550 aff29f0997aaf745c2d595a81522ee3f 387 Gene3D G3DSA:3.40.50.1260 175 371 9.8E-76 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 Pfam PF00753 Metallo-beta-lactamase superfamily 34 172 3.6E-11 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 PIRSF PIRSF005243 1 399 5.2E-163 T 29-03-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 Gene3D G3DSA:2.20.28.10 424 476 8.8E-20 T 29-03-2018 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 475 93.96 T 29-03-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 PRINTS PR00163 Rubredoxin signature 425 441 5.8E-7 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 PRINTS PR00163 Rubredoxin signature 455 471 5.8E-7 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 SUPERFAMILY SSF52218 251 396 7.58E-35 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 SUPERFAMILY SSF56281 8 285 2.23E-51 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 Pfam PF00301 Rubredoxin 425 471 8.1E-21 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 Pfam PF00258 Flavodoxin 256 388 1.5E-12 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 SMART SM00849 34 210 1.1E-28 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 Gene3D G3DSA:3.40.50.360 253 395 8.2E-22 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 Gene3D G3DSA:3.60.15.10 1 247 6.5E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS10720 0eb203bb6a5fbb493f4458f66a9a3acb 479 SUPERFAMILY SSF57802 425 474 3.87E-18 T 29-03-2018 AM460_RS24670 2e621beea4c51bc644b504f994153c83 91 Gene3D G3DSA:3.30.1660.10 21 89 1.8E-17 T 29-03-2018 IPR025543 Dodecin-like AM460_RS24670 2e621beea4c51bc644b504f994153c83 91 SUPERFAMILY SSF159871 2 90 3.27E-21 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS24670 2e621beea4c51bc644b504f994153c83 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 89 3.1E-13 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 SUPERFAMILY SSF52016 421 610 3.37E-60 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 9.7E-274 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 Gene3D G3DSA:3.40.50.2300 51 173 0.0059 T 29-03-2018 AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 SUPERFAMILY SSF143975 3 420 2.48E-135 T 29-03-2018 AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 Pfam PF00920 Dehydratase family 34 607 3.2E-220 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS04335 a7a9aa66cfcae25e5dbe1499919c563f 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.429 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS00725 d80d0a39b2a23dafe24591a7bff9eaa9 410 SUPERFAMILY SSF103473 17 401 5.75E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS00725 d80d0a39b2a23dafe24591a7bff9eaa9 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS00725 d80d0a39b2a23dafe24591a7bff9eaa9 410 Pfam PF07690 Major Facilitator Superfamily 23 354 3.5E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS00725 d80d0a39b2a23dafe24591a7bff9eaa9 410 Gene3D G3DSA:1.20.1250.20 201 397 1.4E-11 T 29-03-2018 AM460_RS00725 d80d0a39b2a23dafe24591a7bff9eaa9 410 Gene3D G3DSA:1.20.1250.20 8 197 6.4E-27 T 29-03-2018 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 Gene3D G3DSA:3.30.70.1560 145 212 4.7E-23 T 29-03-2018 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 Gene3D G3DSA:3.10.290.10 4 65 3.4E-18 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 SMART SM00363 7 68 3.4E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 SUPERFAMILY SSF55174 7 62 2.02E-13 T 29-03-2018 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 Gene3D G3DSA:3.30.70.580 66 144 5.1E-17 T 29-03-2018 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 Pfam PF01479 S4 domain 7 52 1.8E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 SUPERFAMILY SSF55120 69 229 2.37E-38 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 1.9E-15 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS02885 e2647d092ed8fafbe1fce120b360b28f 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 4.9E-54 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 Gene3D G3DSA:2.40.50.140 225 341 0.006 T 29-03-2018 AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 4.9E-129 T 29-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 SMART SM00382 27 214 3.2E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 Pfam PF00005 ABC transporter 18 164 4.9E-38 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 SUPERFAMILY SSF52540 3 244 9.13E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 Pfam PF12857 TOBE-like domain 289 339 9.9E-8 T 29-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 Gene3D G3DSA:3.40.50.300 1 224 9.8E-75 T 29-03-2018 AM460_RS12220 5c38bc291d192c3762cac45ffb7ddc12 365 SUPERFAMILY SSF50331 239 345 3.97E-14 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS18710 79b398680adb7c45c39ebd7ce496d7e9 71 SUPERFAMILY SSF47413 1 57 3.66E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS18710 79b398680adb7c45c39ebd7ce496d7e9 71 Pfam PF14549 DNA-binding transcriptional regulator Cro 3 60 6.7E-17 T 29-03-2018 AM460_RS18710 79b398680adb7c45c39ebd7ce496d7e9 71 Gene3D G3DSA:1.10.260.40 1 61 4.5E-15 T 29-03-2018 AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 Gene3D G3DSA:2.60.40.10 151 241 5.8E-18 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 147 2.3E-36 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 PRINTS PR00969 Pili chaperone signature 76 97 5.9E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 PRINTS PR00969 Pili chaperone signature 166 181 5.9E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 PRINTS PR00969 Pili chaperone signature 30 39 5.9E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 PRINTS PR00969 Pili chaperone signature 106 123 5.9E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 PRINTS PR00969 Pili chaperone signature 129 144 5.9E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 SUPERFAMILY SSF49584 154 242 3.53E-23 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 Gene3D G3DSA:2.60.40.10 29 148 1.5E-30 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 228 3.4E-11 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS12655 0b869ed0eec9ec064320013c51b08e7f 250 SUPERFAMILY SSF49354 29 147 6.28E-37 T 29-03-2018 IPR008962 PapD-like AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.3E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Gene3D G3DSA:3.30.230.10 217 391 7.1E-39 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 SUPERFAMILY SSF56719 388 621 6.02E-78 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 SMART SM00433 34 624 3.3E-213 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Gene3D G3DSA:3.30.565.10 17 216 4.0E-66 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 SUPERFAMILY SSF54211 217 382 2.85E-47 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Pfam PF01751 Toprim domain 413 521 1.8E-12 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Gene3D G3DSA:3.40.50.670 396 627 2.6E-79 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.234 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 SMART SM00387 27 173 3.0E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 2.5E-25 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 2.0E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 SUPERFAMILY SSF55874 5 215 9.47E-70 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.3E-159 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS08355 d412c495f9936df45467e3cb2d27ce35 630 Pfam PF00204 DNA gyrase B 218 384 3.6E-39 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS24430 76276175b24bc2a79c2eb244dd5c3de7 63 Pfam PF16362 YaiA protein 1 63 5.3E-40 T 29-03-2018 IPR032303 YaiA protein AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 SUPERFAMILY SSF53335 3 209 2.55E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 Pfam PF01555 DNA methylase 21 124 1.9E-11 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 Pfam PF01555 DNA methylase 141 200 8.9E-21 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 1.3E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 1.3E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 1.3E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 1.3E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 1.3E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS27670 a28d0988cdf01ca3452c6275f80bf923 227 Gene3D G3DSA:3.40.50.150 2 220 6.0E-42 T 29-03-2018 AM460_RS06770 b03e8014b55772b0f348c0e14783f378 125 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 103 9.3E-39 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AM460_RS06770 b03e8014b55772b0f348c0e14783f378 125 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06770 b03e8014b55772b0f348c0e14783f378 125 SUPERFAMILY SSF54523 38 110 2.88E-12 T 29-03-2018 AM460_RS06770 b03e8014b55772b0f348c0e14783f378 125 Gene3D G3DSA:3.30.1300.30 32 123 1.1E-14 T 29-03-2018 AM460_RS06770 b03e8014b55772b0f348c0e14783f378 125 Pfam PF02501 Type II secretion system (T2SS), protein I 40 113 5.3E-13 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AM460_RS06770 b03e8014b55772b0f348c0e14783f378 125 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.2E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06770 b03e8014b55772b0f348c0e14783f378 125 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 SUPERFAMILY SSF56645 1 227 2.36E-51 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 Gene3D G3DSA:1.20.140.10 218 383 2.2E-53 T 29-03-2018 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 107 3.3E-17 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 SUPERFAMILY SSF47203 226 381 4.19E-50 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 Gene3D G3DSA:1.10.540.10 1 115 1.4E-19 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 1.4E-22 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 PIRSF PIRSF016578 235 381 1.7E-10 T 29-03-2018 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 PIRSF PIRSF016578 8 96 0.0013 T 29-03-2018 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 PIRSF PIRSF016578 134 190 9.3 T 29-03-2018 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 2.6E-45 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 Gene3D G3DSA:2.40.110.10 120 217 2.9E-28 T 29-03-2018 AM460_RS16560 f4fbd7821c38d46764fc40e1be629d2d 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 29-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 1 79 9.1E-16 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 29-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04505 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS13740 39afb12f8e36ff9141ee3713e61b64bd 35 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 15.482 T 29-03-2018 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 SUPERFAMILY SSF50621 227 355 1.01E-44 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 Gene3D G3DSA:2.40.37.10 202 356 1.5E-60 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 TIGRFAM TIGR00492 alr: alanine racemase 4 356 8.5E-142 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 Hamap MF_01201 Alanine racemase. 2 356 33.789 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 SMART SM01005 232 356 6.6E-62 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 SUPERFAMILY SSF51419 9 233 4.58E-65 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 1.7E-67 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 61 79 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 190 217 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 27 43 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 248 263 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 286 303 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 338 351 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 265 280 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 155 166 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 PRINTS PR00992 Alanine racemase signature 121 133 4.7E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 Gene3D G3DSA:3.20.20.10 5 201 1.6E-39 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS19335 ec44068fd5b5da1ff25802d0f17c4a7a 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 1.6E-40 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 Gene3D G3DSA:3.40.1550.10 46 234 5.2E-37 T 29-03-2018 IPR028976 CheC-like domain AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 SUPERFAMILY SSF103039 49 231 3.66E-18 T 29-03-2018 IPR028976 CheC-like domain AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 Gene3D G3DSA:2.30.330.10 239 329 7.6E-16 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 2.4E-16 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 2.7E-120 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 2.9E-32 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 2.9E-32 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.9E-32 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 2.9E-32 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 SUPERFAMILY SSF101801 249 323 1.57E-12 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 PIRSF PIRSF002888 2 331 1.1E-100 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM460_RS14915 0b2aceb704c9cf7816726884a0248460 334 Pfam PF02154 Flagellar motor switch protein FliM 38 231 2.7E-80 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM460_RS18830 6e30b3781d8775e9374b1e8aebaa0169 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 1.1E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18830 6e30b3781d8775e9374b1e8aebaa0169 302 Gene3D G3DSA:1.10.3720.10 28 291 9.7E-38 T 29-03-2018 AM460_RS18830 6e30b3781d8775e9374b1e8aebaa0169 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 2.7E-14 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM460_RS18830 6e30b3781d8775e9374b1e8aebaa0169 302 SUPERFAMILY SSF161098 100 283 3.92E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 Gene3D G3DSA:3.40.47.10 263 413 7.1E-53 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 SUPERFAMILY SSF53901 3 252 7.02E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 Gene3D G3DSA:3.40.47.10 6 260 3.3E-81 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.6E-196 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 PIRSF PIRSF000447 1 413 6.3E-206 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 SUPERFAMILY SSF53901 215 412 1.54E-73 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.8E-63 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 SMART SM00825 Beta-ketoacyl synthase 6 413 9.7E-14 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM460_RS20090 401689333e60d09779c2ba651ccf31a1 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.5E-39 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 Gene3D G3DSA:3.40.1190.20 2 262 2.2E-51 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 262 29.952 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 PIRSF PIRSF000513 9 262 1.8E-103 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 Pfam PF02110 Hydroxyethylthiazole kinase family 15 259 2.0E-103 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 15 261 4.1E-99 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 3.3E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 3.3E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 3.3E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 3.3E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 3.3E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 3.3E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13865 5fb8b31a30044de278200ef4389463d7 262 SUPERFAMILY SSF53613 13 260 1.8E-60 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS15725 4c6c5e36bbf7d7afd68e4f4d18083e45 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS15725 4c6c5e36bbf7d7afd68e4f4d18083e45 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS15725 4c6c5e36bbf7d7afd68e4f4d18083e45 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 602 0.0 T 29-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AM460_RS15725 4c6c5e36bbf7d7afd68e4f4d18083e45 603 Pfam PF00920 Dehydratase family 66 598 3.5E-159 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM460_RS15725 4c6c5e36bbf7d7afd68e4f4d18083e45 603 SUPERFAMILY SSF52016 419 600 1.02E-57 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS15725 4c6c5e36bbf7d7afd68e4f4d18083e45 603 SUPERFAMILY SSF143975 1 418 9.15E-147 T 29-03-2018 AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.6E-39 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 2.0E-23 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 SUPERFAMILY SSF50104 4 100 2.84E-33 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 Pfam PF00467 KOW motif 8 37 7.7E-5 T 29-03-2018 IPR005824 KOW AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 29-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.134 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 SMART SM00739 4 31 9.8E-4 T 29-03-2018 IPR005824 KOW AM460_RS06875 843856d29a4c77ef91291d40b46e77cd 104 Gene3D G3DSA:2.30.30.30 2 93 3.0E-30 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM460_RS23285 20f397a95735142ebb05825c6c566ddc 226 SMART SM00448 5 118 9.6E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS23285 20f397a95735142ebb05825c6c566ddc 226 Gene3D G3DSA:3.40.50.2300 4 133 4.5E-23 T 29-03-2018 AM460_RS23285 20f397a95735142ebb05825c6c566ddc 226 Pfam PF12431 Transcriptional regulator 135 160 4.2E-8 T 29-03-2018 IPR028141 Transcriptional regulator AM460_RS23285 20f397a95735142ebb05825c6c566ddc 226 SUPERFAMILY SSF52172 4 179 4.7E-29 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS23285 20f397a95735142ebb05825c6c566ddc 226 Gene3D G3DSA:1.10.10.60 134 201 2.8E-4 T 29-03-2018 AM460_RS23285 20f397a95735142ebb05825c6c566ddc 226 Pfam PF00072 Response regulator receiver domain 8 117 2.7E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS23285 20f397a95735142ebb05825c6c566ddc 226 PIRSF PIRSF006171 3 226 5.3E-78 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 6.0E-62 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 3.5E-100 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 Gene3D G3DSA:2.60.40.10 649 764 1.7E-35 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 SMART SM01217 685 754 8.0E-32 T 29-03-2018 IPR026891 Fibronectin type III-like domain AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 5.3E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 5.3E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 5.3E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 5.3E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 5.3E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 SUPERFAMILY SSF52279 395 464 3.66E-58 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 SUPERFAMILY SSF52279 495 651 3.66E-58 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 Pfam PF14310 Fibronectin type III-like domain 686 754 3.5E-23 T 29-03-2018 IPR026891 Fibronectin type III-like domain AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 Gene3D G3DSA:3.40.50.1700 380 648 3.1E-85 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 Gene3D G3DSA:3.20.20.300 32 374 3.8E-103 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS13715 081fdde2b0369c5ee954c28343b4cdce 765 SUPERFAMILY SSF51445 34 394 1.9E-98 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS13460 0de1218828e725b20902355cbc0512d5 518 SUPERFAMILY SSF141868 267 514 1.09E-72 T 29-03-2018 IPR001633 EAL domain AM460_RS13460 0de1218828e725b20902355cbc0512d5 518 Pfam PF00563 EAL domain 267 500 1.4E-67 T 29-03-2018 IPR001633 EAL domain AM460_RS13460 0de1218828e725b20902355cbc0512d5 518 SMART SM00052 260 505 2.2E-106 T 29-03-2018 IPR001633 EAL domain AM460_RS13460 0de1218828e725b20902355cbc0512d5 518 Gene3D G3DSA:3.20.20.450 260 515 2.2E-76 T 29-03-2018 IPR001633 EAL domain AM460_RS13460 0de1218828e725b20902355cbc0512d5 518 Pfam PF12792 CSS motif domain associated with EAL 42 239 1.8E-42 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM460_RS17980 2d4fe43478b903582bac765e31eb768a 343 SUPERFAMILY SSF50182 162 228 1.21E-17 T 29-03-2018 IPR010920 LSM domain AM460_RS17980 2d4fe43478b903582bac765e31eb768a 343 Pfam PF00924 Mechanosensitive ion channel 120 323 9.5E-64 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM460_RS17980 2d4fe43478b903582bac765e31eb768a 343 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 194 228 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM460_RS17980 2d4fe43478b903582bac765e31eb768a 343 Gene3D G3DSA:2.30.30.60 178 228 4.0E-14 T 29-03-2018 AM460_RS17980 2d4fe43478b903582bac765e31eb768a 343 SUPERFAMILY SSF82689 231 335 8.37E-22 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM460_RS17980 2d4fe43478b903582bac765e31eb768a 343 Gene3D G3DSA:3.30.70.100 230 329 1.4E-20 T 29-03-2018 AM460_RS17980 2d4fe43478b903582bac765e31eb768a 343 SUPERFAMILY SSF82861 79 160 1.96E-10 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 Gene3D G3DSA:1.10.940.10 1 145 1.7E-34 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 239 426 3.2E-80 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 Gene3D G3DSA:3.30.70.1170 173 230 2.2E-16 T 29-03-2018 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 74.636 T 29-03-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 Pfam PF01029 NusB family 6 127 2.3E-26 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 Gene3D G3DSA:1.10.287.730 146 172 9.7E-16 T 29-03-2018 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 Gene3D G3DSA:3.40.50.150 231 429 4.9E-53 T 29-03-2018 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 1.3E-196 T 29-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 SUPERFAMILY SSF48013 5 149 2.62E-36 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS06980 5ccda4be2cb6118b5be9d76b3f785236 429 SUPERFAMILY SSF53335 142 429 1.34E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS02315 68952e880aed857a83e3de3fd1135321 338 Gene3D G3DSA:3.40.190.10 28 126 1.6E-7 T 29-03-2018 AM460_RS02315 68952e880aed857a83e3de3fd1135321 338 Gene3D G3DSA:3.40.190.10 127 276 8.9E-30 T 29-03-2018 AM460_RS02315 68952e880aed857a83e3de3fd1135321 338 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 291 8.8E-113 T 29-03-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 AM460_RS02315 68952e880aed857a83e3de3fd1135321 338 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 277 4.0E-71 T 29-03-2018 AM460_RS02315 68952e880aed857a83e3de3fd1135321 338 SUPERFAMILY SSF53850 54 244 1.61E-44 T 29-03-2018 AM460_RS02315 68952e880aed857a83e3de3fd1135321 338 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 3 254 4.0E-94 T 29-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AM460_RS20745 6e976338c49dd8c0c0ebfdcfc9c09756 169 Gene3D G3DSA:3.40.50.300 30 148 1.5E-16 T 29-03-2018 AM460_RS20745 6e976338c49dd8c0c0ebfdcfc9c09756 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 1.3E-100 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM460_RS20745 6e976338c49dd8c0c0ebfdcfc9c09756 169 PIRSF PIRSF003093 1 169 4.5E-88 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM460_RS20745 6e976338c49dd8c0c0ebfdcfc9c09756 169 SUPERFAMILY SSF52540 31 147 2.97E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20745 6e976338c49dd8c0c0ebfdcfc9c09756 169 Pfam PF03846 Cell division inhibitor SulA 6 119 2.1E-56 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM460_RS20745 6e976338c49dd8c0c0ebfdcfc9c09756 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 42.032 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 Gene3D G3DSA:3.40.50.300 201 371 3.9E-23 T 29-03-2018 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 SMART SM00091 80 147 2.1E-4 T 29-03-2018 IPR000014 PAS domain AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 SMART SM00382 226 363 7.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 SUPERFAMILY SSF55021 2 69 2.59E-5 T 29-03-2018 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 Gene3D G3DSA:3.30.70.260 1 81 1.0E-8 T 29-03-2018 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 2.3E-28 T 29-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 SUPERFAMILY SSF55785 82 174 1.47E-8 T 29-03-2018 IPR000014 PAS domain AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 Pfam PF13188 PAS domain 82 134 1.2E-4 T 29-03-2018 IPR000014 PAS domain AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 SUPERFAMILY SSF46689 454 507 4.93E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 Gene3D G3DSA:3.30.450.20 82 185 8.7E-11 T 29-03-2018 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 SUPERFAMILY SSF52540 206 440 3.38E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 Pfam PF00158 Sigma-54 interaction domain 207 365 1.2E-55 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 Gene3D G3DSA:1.10.10.60 448 508 7.6E-8 T 29-03-2018 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 Gene3D G3DSA:1.10.8.60 372 442 1.2E-17 T 29-03-2018 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS18020 c08a249e73a4d2fac9513d85d058396c 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 SUPERFAMILY SSF74653 152 221 5.49E-22 T 29-03-2018 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 Gene3D G3DSA:3.30.2420.10 163 238 2.2E-20 T 29-03-2018 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 Pfam PF16031 TonB N-terminal region 33 156 3.1E-36 T 29-03-2018 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 226 5.0E-19 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 160 232 3.4E-21 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 101 3.4E-40 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 154 175 3.4E-40 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 194 211 3.4E-40 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM460_RS18790 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 175 193 3.4E-40 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 Pfam PF00171 Aldehyde dehydrogenase family 8 282 3.2E-17 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 1.1E-202 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 29-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 SUPERFAMILY SSF53720 3 416 4.19E-117 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 Gene3D G3DSA:3.40.605.10 238 417 1.9E-36 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 PIRSF PIRSF000151 1 417 1.7E-180 T 29-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.958 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM460_RS25065 d4af6b0493115e6529b0015c2c2caa5d 417 Gene3D G3DSA:3.40.605.10 2 237 1.3E-44 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS07075 a02cc904fd04bf7c9837b6fed9b4c9a4 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 388 5.5E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS07075 a02cc904fd04bf7c9837b6fed9b4c9a4 393 Gene3D G3DSA:1.10.3720.10 11 173 2.8E-20 T 29-03-2018 AM460_RS07075 a02cc904fd04bf7c9837b6fed9b4c9a4 393 Gene3D G3DSA:1.10.3720.10 177 393 1.9E-37 T 29-03-2018 AM460_RS07075 a02cc904fd04bf7c9837b6fed9b4c9a4 393 SUPERFAMILY SSF161098 83 154 9.42E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS07075 a02cc904fd04bf7c9837b6fed9b4c9a4 393 SUPERFAMILY SSF161098 181 374 8.24E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS07075 a02cc904fd04bf7c9837b6fed9b4c9a4 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 4.5E-17 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS08990 4b3f3a54bbcf9b42f05a750c3df90ca3 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS08990 4b3f3a54bbcf9b42f05a750c3df90ca3 291 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 47.107 T 29-03-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 AM460_RS08990 4b3f3a54bbcf9b42f05a750c3df90ca3 291 Gene3D G3DSA:3.30.420.40 119 290 7.3E-39 T 29-03-2018 AM460_RS08990 4b3f3a54bbcf9b42f05a750c3df90ca3 291 Pfam PF00480 ROK family 4 285 3.2E-70 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS08990 4b3f3a54bbcf9b42f05a750c3df90ca3 291 SUPERFAMILY SSF53067 1 285 3.47E-53 T 29-03-2018 AM460_RS08990 4b3f3a54bbcf9b42f05a750c3df90ca3 291 Gene3D G3DSA:3.30.420.40 2 118 1.1E-16 T 29-03-2018 AM460_RS02640 3aa5accbde93c9fab3d20e36d6b4880b 237 PIRSF PIRSF017818 1 237 1.8E-123 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM460_RS02640 3aa5accbde93c9fab3d20e36d6b4880b 237 Gene3D G3DSA:3.40.50.1000 27 237 2.5E-41 T 29-03-2018 IPR023214 HAD-like domain AM460_RS02640 3aa5accbde93c9fab3d20e36d6b4880b 237 SUPERFAMILY SSF56784 31 237 2.33E-76 T 29-03-2018 IPR023214 HAD-like domain AM460_RS02640 3aa5accbde93c9fab3d20e36d6b4880b 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 11 220 3.4E-50 T 29-03-2018 IPR005519 Acid phosphatase, class B-like AM460_RS02640 3aa5accbde93c9fab3d20e36d6b4880b 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 1.6E-127 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM460_RS23960 1449633d56dd8d989f8fc5fd95c8017c 558 Gene3D G3DSA:3.40.50.720 416 550 2.7E-17 T 29-03-2018 AM460_RS23960 1449633d56dd8d989f8fc5fd95c8017c 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.2E-76 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM460_RS23960 1449633d56dd8d989f8fc5fd95c8017c 558 Gene3D G3DSA:1.20.91.10 239 320 1.5E-6 T 29-03-2018 AM460_RS23960 1449633d56dd8d989f8fc5fd95c8017c 558 Pfam PF02254 TrkA-N domain 421 534 3.7E-25 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM460_RS23960 1449633d56dd8d989f8fc5fd95c8017c 558 SUPERFAMILY SSF51735 418 549 2.63E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS23960 1449633d56dd8d989f8fc5fd95c8017c 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 9.2E-77 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 Gene3D G3DSA:1.10.10.60 136 179 8.0E-8 T 29-03-2018 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 Gene3D G3DSA:1.20.5.40 107 134 1.6E-20 T 29-03-2018 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 SUPERFAMILY SSF46689 138 183 5.02E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 Gene3D G3DSA:3.40.50.1390 2 106 9.5E-36 T 29-03-2018 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 SMART SM00857 2 136 4.4E-64 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 Pfam PF00239 Resolvase, N terminal domain 3 135 1.2E-48 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 SUPERFAMILY SSF53041 2 135 1.28E-47 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 Pfam PF02796 Helix-turn-helix domain of resolvase 138 180 2.1E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM460_RS21770 62352423fdaa66abc7bbeb1af1a15289 199 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS12905 f9cf5ef975a24d6cd284ebce2bd80383 220 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12905 f9cf5ef975a24d6cd284ebce2bd80383 220 SUPERFAMILY SSF56770 35 185 2.09E-65 T 29-03-2018 AM460_RS12905 f9cf5ef975a24d6cd284ebce2bd80383 220 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 8.0E-71 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12905 f9cf5ef975a24d6cd284ebce2bd80383 220 Gene3D G3DSA:3.40.50.700 36 205 1.7E-38 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12905 f9cf5ef975a24d6cd284ebce2bd80383 220 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 42.699 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12905 f9cf5ef975a24d6cd284ebce2bd80383 220 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 64 170 3.5E-22 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 Gene3D G3DSA:3.40.50.1000 186 264 0.001 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 Gene3D G3DSA:3.40.50.1000 1 97 8.1E-13 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.4E-54 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 SUPERFAMILY SSF56784 1 264 4.07E-63 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 Gene3D G3DSA:3.30.1240.10 98 185 3.8E-23 T 29-03-2018 AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 29-03-2018 AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 9.1E-20 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS22085 77c561351ab397a7fd30dcf79edebb49 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.4E-57 T 29-03-2018 IPR000150 Cof family GO:0016787 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Pfam PF05188 MutS domain II 131 256 5.5E-33 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Gene3D G3DSA:3.40.1170.10 2 134 1.1E-47 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 SUPERFAMILY SSF52540 567 798 8.18E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Pfam PF05192 MutS domain III 272 559 2.1E-40 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 SUPERFAMILY SSF53150 117 269 1.57E-42 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Gene3D G3DSA:1.10.1420.10 408 535 3.5E-30 T 29-03-2018 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 PIRSF PIRSF037677 4 190 1.3E-27 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 PIRSF PIRSF037677 220 831 5.6E-127 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 SUPERFAMILY SSF48334 270 566 1.18E-90 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 SMART SM00533 286 591 8.7E-112 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.479 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Pfam PF05190 MutS family domain IV 428 517 1.1E-28 T 29-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Gene3D G3DSA:3.30.420.110 135 265 1.6E-26 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 SMART SM00534 607 794 2.5E-123 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Gene3D G3DSA:1.10.1420.10 266 407 4.0E-37 T 29-03-2018 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Gene3D G3DSA:3.40.50.300 567 821 8.7E-42 T 29-03-2018 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Pfam PF01624 MutS domain I 11 122 6.8E-43 T 29-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 Pfam PF00488 MutS domain V 610 797 2.5E-88 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM460_RS10600 893fac1847e59ceca7ff4019f79657c3 853 SUPERFAMILY SSF55271 6 116 4.05E-43 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM460_RS03880 166ea462247ef1497a4894264e31d870 162 SMART SM00738 1 100 1.1E-33 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03880 166ea462247ef1497a4894264e31d870 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.1E-19 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03880 166ea462247ef1497a4894264e31d870 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 4.6E-70 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM460_RS03880 166ea462247ef1497a4894264e31d870 162 SUPERFAMILY SSF82679 1 96 1.26E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03880 166ea462247ef1497a4894264e31d870 162 Gene3D G3DSA:2.30.30.30 111 162 5.1E-6 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM460_RS03880 166ea462247ef1497a4894264e31d870 162 Gene3D G3DSA:3.30.70.940 1 98 6.9E-19 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS03880 166ea462247ef1497a4894264e31d870 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 48.166 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.921 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 SUPERFAMILY SSF52540 1 141 3.46E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 PIRSF PIRSF035805 1 199 1.6E-56 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 Gene3D G3DSA:3.30.60.20 142 192 8.3E-19 T 29-03-2018 AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 Gene3D G3DSA:3.40.50.300 2 141 6.4E-44 T 29-03-2018 AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 SUPERFAMILY SSF57716 142 189 1.57E-16 T 29-03-2018 AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 29-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM460_RS18860 7cf046573fdd892bb35e8f49e5a147ef 205 Pfam PF00265 Thymidine kinase 2 186 5.9E-67 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 Gene3D G3DSA:2.40.50.140 380 441 8.0E-22 T 29-03-2018 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 95 2.1E-21 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 Pfam PF04055 Radical SAM superfamily 146 323 3.2E-30 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 SUPERFAMILY SSF102114 107 371 4.84E-54 T 29-03-2018 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 1.8E-110 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 64.111 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 6.7E-203 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 SMART SM00729 140 365 5.4E-56 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS22130 9233817a6d266fb0b40e090f3f4497d6 441 Gene3D G3DSA:3.80.30.20 137 379 1.8E-48 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM460_RS17920 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 256 327 9.8E-16 T 29-03-2018 AM460_RS17920 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 72.982 T 29-03-2018 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 AM460_RS17920 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 3.1E-64 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM460_RS17920 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF144083 263 324 4.71E-13 T 29-03-2018 AM460_RS17920 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 140 255 3.3E-17 T 29-03-2018 AM460_RS17920 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF143865 8 255 1.22E-48 T 29-03-2018 AM460_RS17920 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:3.30.460.20 1 139 3.9E-20 T 29-03-2018 AM460_RS00610 4f016d34e7256b3b6a22c089b368f3e9 763 Gene3D G3DSA:3.40.720.10 151 449 1.7E-30 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS00610 4f016d34e7256b3b6a22c089b368f3e9 763 Pfam PF00884 Sulfatase 163 446 2.7E-22 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS00610 4f016d34e7256b3b6a22c089b368f3e9 763 SUPERFAMILY SSF53649 161 469 4.36E-31 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS00610 4f016d34e7256b3b6a22c089b368f3e9 763 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 6 738 54.269 T 29-03-2018 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:1.20.58.100 431 540 7.0E-37 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.50.50.60 3 294 2.0E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.50.50.60 302 430 9.8E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 PIRSF PIRSF000171 1 579 1.4E-47 T 29-03-2018 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 Pfam PF00890 FAD binding domain 9 405 2.6E-118 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.8E-278 T 29-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF46977 452 588 2.88E-46 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.5E-5 T 29-03-2018 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 5.5E-5 T 29-03-2018 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.2E-35 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:4.10.80.40 541 588 5.2E-12 T 29-03-2018 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF51905 4 259 1.97E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF51905 359 440 1.97E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS22730 d58a08a8499799efa72d9df42f21ed0f 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 5.2E-242 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS17540 8101cafda242989f4221b62e43e9f610 462 Gene3D G3DSA:1.20.1250.20 19 234 3.4E-16 T 29-03-2018 AM460_RS17540 8101cafda242989f4221b62e43e9f610 462 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 415 2.8E-102 T 29-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM460_RS17540 8101cafda242989f4221b62e43e9f610 462 SUPERFAMILY SSF103473 17 457 6.28E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17540 8101cafda242989f4221b62e43e9f610 462 Pfam PF07690 Major Facilitator Superfamily 43 419 7.1E-9 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS17540 8101cafda242989f4221b62e43e9f610 462 Gene3D G3DSA:1.20.1250.20 242 462 5.8E-22 T 29-03-2018 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 Gene3D G3DSA:3.30.70.890 207 381 5.9E-58 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PIRSF PIRSF000530 1 382 3.0E-122 T 29-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 Pfam PF08544 GHMP kinases C terminal 279 361 4.5E-13 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 2.0E-46 T 29-03-2018 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 2.0E-46 T 29-03-2018 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 2.0E-46 T 29-03-2018 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 2.0E-46 T 29-03-2018 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00473 Galactokinase signature 263 277 5.0E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00473 Galactokinase signature 27 45 5.0E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00473 Galactokinase signature 92 103 5.0E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 PRINTS PR00473 Galactokinase signature 112 130 5.0E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 2.6E-14 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 29-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 2.2E-176 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 Pfam PF10509 Galactokinase galactose-binding signature 11 58 1.9E-21 T 29-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 SUPERFAMILY SSF54211 3 202 1.67E-63 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 SUPERFAMILY SSF55060 205 380 5.12E-52 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.87 T 29-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM460_RS22545 c3a5104c676445d8933210aa5391f2f8 382 Gene3D G3DSA:3.30.230.10 2 206 1.4E-58 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 330 2.1E-41 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 SUPERFAMILY SSF55073 179 330 1.26E-38 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 SMART SM00065 18 164 5.5E-17 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 SUPERFAMILY SSF55781 18 167 5.89E-17 T 29-03-2018 IPR029016 GAF domain-like AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 Pfam PF13185 GAF domain 17 155 9.6E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 Gene3D G3DSA:3.30.450.40 2 166 1.3E-19 T 29-03-2018 IPR029016 GAF domain-like AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 Gene3D G3DSA:3.30.70.270 167 335 2.2E-47 T 29-03-2018 AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 SMART SM00267 163 335 1.8E-53 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16025 5b3a4cf787982d8f65844d268dde1d3b 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 334 3.8E-37 T 29-03-2018 IPR000160 GGDEF domain AM460_RS00530 81cd1b8b1cb2883140e8f3236864a30e 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 78 194 7.7E-21 T 29-03-2018 IPR023214 HAD-like domain AM460_RS00530 81cd1b8b1cb2883140e8f3236864a30e 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 3.3E-75 T 29-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AM460_RS00530 81cd1b8b1cb2883140e8f3236864a30e 225 Gene3D G3DSA:3.40.50.1000 86 225 4.8E-34 T 29-03-2018 IPR023214 HAD-like domain AM460_RS00530 81cd1b8b1cb2883140e8f3236864a30e 225 Gene3D G3DSA:1.10.150.240 15 85 1.2E-17 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS00530 81cd1b8b1cb2883140e8f3236864a30e 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 189 2.0E-17 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS00530 81cd1b8b1cb2883140e8f3236864a30e 225 SUPERFAMILY SSF56784 3 222 1.31E-47 T 29-03-2018 IPR023214 HAD-like domain AM460_RS00530 81cd1b8b1cb2883140e8f3236864a30e 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 195 4.0E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS24270 2a0917b57d6f69180565357666938739 620 Gene3D G3DSA:3.40.50.920 495 620 3.0E-34 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS24270 2a0917b57d6f69180565357666938739 620 Pfam PF02780 Transketolase, C-terminal domain 495 609 4.4E-27 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM460_RS24270 2a0917b57d6f69180565357666938739 620 Gene3D G3DSA:3.40.50.970 3 296 4.0E-74 T 29-03-2018 AM460_RS24270 2a0917b57d6f69180565357666938739 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.653 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS24270 2a0917b57d6f69180565357666938739 620 SUPERFAMILY SSF52518 10 199 3.76E-75 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS24270 2a0917b57d6f69180565357666938739 620 SUPERFAMILY SSF52518 243 381 3.76E-75 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS24270 2a0917b57d6f69180565357666938739 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 5.2E-40 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS24270 2a0917b57d6f69180565357666938739 620 SUPERFAMILY SSF52518 317 504 9.94E-58 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS24270 2a0917b57d6f69180565357666938739 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS24270 2a0917b57d6f69180565357666938739 620 Gene3D G3DSA:3.40.50.970 297 487 2.8E-63 T 29-03-2018 AM460_RS24270 2a0917b57d6f69180565357666938739 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS24270 2a0917b57d6f69180565357666938739 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 4.4E-116 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS24270 2a0917b57d6f69180565357666938739 620 SMART SM00861 319 484 8.7E-69 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS24270 2a0917b57d6f69180565357666938739 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS24270 2a0917b57d6f69180565357666938739 620 SUPERFAMILY SSF52922 491 619 2.49E-32 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS20735 564b6d7190f3bb8c3d828248349322c6 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 8 705 0.0 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK AM460_RS20735 564b6d7190f3bb8c3d828248349322c6 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 8 706 0.0 T 29-03-2018 IPR010019 Integral membrane protein, YccS AM460_RS20735 564b6d7190f3bb8c3d828248349322c6 717 Gene3D G3DSA:1.25.40.10 124 682 0.0023 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS20735 564b6d7190f3bb8c3d828248349322c6 717 Pfam PF13515 Fusaric acid resistance protein-like 403 525 2.0E-25 T 29-03-2018 AM460_RS20735 564b6d7190f3bb8c3d828248349322c6 717 Pfam PF12805 FUSC-like inner membrane protein yccS 66 345 9.0E-112 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AM460_RS20845 b6797a1edd2111f5315a6e44db17d21c 255 Pfam PF00005 ABC transporter 27 160 4.0E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS20845 b6797a1edd2111f5315a6e44db17d21c 255 Gene3D G3DSA:3.40.50.300 10 218 1.7E-57 T 29-03-2018 AM460_RS20845 b6797a1edd2111f5315a6e44db17d21c 255 SUPERFAMILY SSF52540 13 213 7.21E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20845 b6797a1edd2111f5315a6e44db17d21c 255 SMART SM00382 36 210 2.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS20845 b6797a1edd2111f5315a6e44db17d21c 255 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS14745 ccf122a9b2588c929f05a53bd7c14f1c 420 Pfam PF13356 Arm DNA-binding domain 3 87 1.3E-17 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM460_RS14745 ccf122a9b2588c929f05a53bd7c14f1c 420 Pfam PF00589 Phage integrase family 225 383 3.8E-18 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS14745 ccf122a9b2588c929f05a53bd7c14f1c 420 SUPERFAMILY SSF56349 98 392 5.59E-55 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS14745 ccf122a9b2588c929f05a53bd7c14f1c 420 Gene3D G3DSA:1.10.150.130 86 200 4.6E-20 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS14745 ccf122a9b2588c929f05a53bd7c14f1c 420 Gene3D G3DSA:1.10.443.10 201 398 5.4E-22 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS12770 e1cf3453d6c695e7e1cf45c2cb030907 220 Gene3D G3DSA:3.30.70.1070 137 217 3.6E-8 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS12770 e1cf3453d6c695e7e1cf45c2cb030907 220 Hamap MF_02022 Cell division protein DedD [dedD]. 10 219 24.5 T 29-03-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 AM460_RS12770 e1cf3453d6c695e7e1cf45c2cb030907 220 Pfam PF05036 Sporulation related domain 141 214 2.9E-11 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS12770 e1cf3453d6c695e7e1cf45c2cb030907 220 SUPERFAMILY SSF110997 140 217 1.57E-12 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS04095 654589fbd0159975e9024582a2cf47d1 316 Gene3D G3DSA:1.20.58.340 249 316 7.8E-21 T 29-03-2018 AM460_RS04095 654589fbd0159975e9024582a2cf47d1 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 5.4E-115 T 29-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 AM460_RS04095 654589fbd0159975e9024582a2cf47d1 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 9.0E-57 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM460_RS04095 654589fbd0159975e9024582a2cf47d1 316 Gene3D G3DSA:1.20.58.340 131 248 5.5E-9 T 29-03-2018 AM460_RS04095 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF143865 1 255 4.71E-38 T 29-03-2018 AM460_RS04095 654589fbd0159975e9024582a2cf47d1 316 Gene3D G3DSA:3.30.460.20 1 125 5.9E-11 T 29-03-2018 AM460_RS04095 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 29-03-2018 AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 29-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 283 382 6.0E-26 T 29-03-2018 AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 383 659 1.1E-52 T 29-03-2018 AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 5 150 3.1E-27 T 29-03-2018 AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 151 282 1.6E-32 T 29-03-2018 AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 7.0E-76 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 SUPERFAMILY SSF52540 7 642 1.72E-182 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04110 2d8cb0d1593dada736404297fa854c25 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.3E-75 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM460_RS09735 c3447029777d6884bc05c36f065493d1 182 PIRSF PIRSF018427 1 181 2.8E-57 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM460_RS09735 c3447029777d6884bc05c36f065493d1 182 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 34.012 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM460_RS09735 c3447029777d6884bc05c36f065493d1 182 SUPERFAMILY SSF55811 4 166 1.02E-50 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS09735 c3447029777d6884bc05c36f065493d1 182 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 165 5.3E-46 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM460_RS09735 c3447029777d6884bc05c36f065493d1 182 Gene3D G3DSA:3.90.79.10 31 182 3.3E-28 T 29-03-2018 AM460_RS09735 c3447029777d6884bc05c36f065493d1 182 Pfam PF00293 NUDIX domain 31 161 5.3E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS04265 1219b29b57af0f4a060cebd80a3df362 376 Gene3D G3DSA:3.40.50.2000 1 211 2.4E-79 T 29-03-2018 AM460_RS04265 1219b29b57af0f4a060cebd80a3df362 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 3.9E-187 T 29-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AM460_RS04265 1219b29b57af0f4a060cebd80a3df362 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 3.0E-129 T 29-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 AM460_RS04265 1219b29b57af0f4a060cebd80a3df362 376 SUPERFAMILY SSF53756 2 371 1.04E-142 T 29-03-2018 AM460_RS04265 1219b29b57af0f4a060cebd80a3df362 376 Gene3D G3DSA:3.40.50.2000 212 356 6.7E-39 T 29-03-2018 AM460_RS04265 1219b29b57af0f4a060cebd80a3df362 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 66.377 T 29-03-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 Gene3D G3DSA:3.40.50.80 255 396 1.1E-24 T 29-03-2018 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 1.4E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 Gene3D G3DSA:2.40.30.10 158 254 3.1E-25 T 29-03-2018 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 Gene3D G3DSA:1.10.490.10 1 157 1.0E-39 T 29-03-2018 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 Pfam PF00042 Globin 7 103 1.1E-14 T 29-03-2018 IPR000971 Globin GO:0020037 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 57.475 T 29-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 SUPERFAMILY SSF63380 148 253 4.43E-29 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 SUPERFAMILY SSF52343 256 394 1.19E-37 T 29-03-2018 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 Pfam PF00970 Oxidoreductase FAD-binding domain 162 252 5.6E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 SUPERFAMILY SSF46458 1 142 4.49E-38 T 29-03-2018 IPR009050 Globin-like AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.5E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.5E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.5E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS11650 6a4a93661abf919f9fe7fbe2640b0796 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 4.5E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS06080 058702febd80b535259466121a9187c0 498 Gene3D G3DSA:1.20.120.140 187 281 4.7E-23 T 29-03-2018 AM460_RS06080 058702febd80b535259466121a9187c0 498 Gene3D G3DSA:3.40.50.300 287 496 3.2E-40 T 29-03-2018 AM460_RS06080 058702febd80b535259466121a9187c0 498 Pfam PF02881 SRP54-type protein, helical bundle domain 211 276 2.1E-13 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS06080 058702febd80b535259466121a9187c0 498 Pfam PF00448 SRP54-type protein, GTPase domain 294 494 5.3E-79 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS06080 058702febd80b535259466121a9187c0 498 SMART SM00962 294 495 1.0E-124 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS06080 058702febd80b535259466121a9187c0 498 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 223 494 9.9E-116 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM460_RS06080 058702febd80b535259466121a9187c0 498 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 468 481 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS06080 058702febd80b535259466121a9187c0 498 SMART SM00963 200 280 3.3E-24 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS06080 058702febd80b535259466121a9187c0 498 SMART SM00382 293 484 1.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06080 058702febd80b535259466121a9187c0 498 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 223 495 65.632 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM460_RS06080 058702febd80b535259466121a9187c0 498 SUPERFAMILY SSF47364 195 274 1.7E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS06080 058702febd80b535259466121a9187c0 498 SUPERFAMILY SSF52540 287 494 2.34E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 2.2E-141 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 29-03-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 8.2E-34 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 8.2E-34 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 8.2E-34 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 8.2E-34 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 8.2E-34 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 8.2E-34 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 8.3E-29 T 29-03-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 Gene3D G3DSA:3.20.70.20 82 701 7.6E-160 T 29-03-2018 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 SUPERFAMILY SSF48168 13 174 1.83E-63 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 99 171 2.4E-12 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 SUPERFAMILY SSF51998 175 698 8.85E-186 T 29-03-2018 AM460_RS10910 fbfc9241eea5a772d11ce8c6ca09ad07 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 2.0E-158 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 212 5.8E-59 T 29-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Gene3D G3DSA:1.10.260.40 45 83 1.6E-10 T 29-03-2018 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Gene3D G3DSA:1.10.357.10 84 212 6.3E-25 T 29-03-2018 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 5.1E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Gene3D G3DSA:1.10.10.60 8 44 1.3E-11 T 29-03-2018 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 SUPERFAMILY SSF48498 87 212 6.47E-42 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 SUPERFAMILY SSF46689 13 90 1.25E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.6E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.6E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS20495 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 TIGRFAM TIGR03613 RutR: pyrimidine utilization regulatory protein R 11 212 1.5E-116 T 29-03-2018 IPR019915 Transcription regulator, pyrimidine utilisation, RutR AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 Pfam PF03466 LysR substrate binding domain 99 297 2.5E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 SUPERFAMILY SSF53850 100 298 1.28E-23 T 29-03-2018 AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 Gene3D G3DSA:3.40.190.10 99 182 2.9E-4 T 29-03-2018 AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 Gene3D G3DSA:1.10.10.10 6 93 9.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 71 9.7E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 Gene3D G3DSA:3.40.190.10 183 269 3.1E-11 T 29-03-2018 AM460_RS00780 67881ec9fd4c4ab2ca7d7a1226c2eaac 303 SUPERFAMILY SSF46785 12 94 4.59E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04105 dda23cf2bb205a9c6ffc65bd6eeb1281 300 Gene3D G3DSA:2.40.30.90 185 300 1.4E-25 T 29-03-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AM460_RS04105 dda23cf2bb205a9c6ffc65bd6eeb1281 300 SUPERFAMILY SSF102522 23 179 2.09E-56 T 29-03-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AM460_RS04105 dda23cf2bb205a9c6ffc65bd6eeb1281 300 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 26 290 7.4E-74 T 29-03-2018 IPR002747 SAM-dependent chlorinase/fluorinase AM460_RS04105 dda23cf2bb205a9c6ffc65bd6eeb1281 300 PIRSF PIRSF006779 20 296 8.2E-106 T 29-03-2018 IPR002747 SAM-dependent chlorinase/fluorinase AM460_RS04105 dda23cf2bb205a9c6ffc65bd6eeb1281 300 SUPERFAMILY SSF101852 189 293 2.35E-25 T 29-03-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AM460_RS04105 dda23cf2bb205a9c6ffc65bd6eeb1281 300 Gene3D G3DSA:3.40.50.10790 23 184 2.0E-54 T 29-03-2018 AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 Gene3D G3DSA:1.10.10.10 3 90 1.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 SUPERFAMILY SSF53850 94 292 1.5E-30 T 29-03-2018 AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 Pfam PF03466 LysR substrate binding domain 93 292 2.5E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.7E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.7E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.7E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 9.4E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 SUPERFAMILY SSF46785 8 92 1.6E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 Gene3D G3DSA:3.40.190.10 183 271 5.2E-19 T 29-03-2018 AM460_RS12310 e4856944ad1599f52eb10ab12696ef1f 294 Gene3D G3DSA:3.40.190.10 94 182 1.3E-15 T 29-03-2018 AM460_RS13720 646b83d62c978a6808e36186f6578041 305 Gene3D G3DSA:3.40.190.10 171 304 2.8E-18 T 29-03-2018 AM460_RS13720 646b83d62c978a6808e36186f6578041 305 SUPERFAMILY SSF53850 26 303 1.41E-58 T 29-03-2018 AM460_RS13720 646b83d62c978a6808e36186f6578041 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 3.4E-61 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM460_RS13720 646b83d62c978a6808e36186f6578041 305 Gene3D G3DSA:3.40.190.10 19 170 4.6E-25 T 29-03-2018 AM460_RS05635 55c8b3efcf0c1c62e4e2a69cbea0c4a5 250 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 239 4.3E-89 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ AM460_RS05635 55c8b3efcf0c1c62e4e2a69cbea0c4a5 250 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 236 5.3E-109 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ AM460_RS05635 55c8b3efcf0c1c62e4e2a69cbea0c4a5 250 Gene3D G3DSA:3.40.50.300 3 238 4.5E-25 T 29-03-2018 AM460_RS05635 55c8b3efcf0c1c62e4e2a69cbea0c4a5 250 SUPERFAMILY SSF52540 3 235 1.1E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS16080 7d791ccfa3356359facd9673f209c23a 644 Gene3D G3DSA:3.40.50.300 62 355 3.2E-13 T 29-03-2018 AM460_RS16080 7d791ccfa3356359facd9673f209c23a 644 SMART SM00763 19 380 1.2E-217 T 29-03-2018 IPR013153 PrkA AAA domain AM460_RS16080 7d791ccfa3356359facd9673f209c23a 644 PIRSF PIRSF000549 1 644 3.8E-293 T 29-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AM460_RS16080 7d791ccfa3356359facd9673f209c23a 644 SUPERFAMILY SSF52540 241 368 3.57E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS16080 7d791ccfa3356359facd9673f209c23a 644 SUPERFAMILY SSF52540 75 154 3.57E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS16080 7d791ccfa3356359facd9673f209c23a 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 2.5E-75 T 29-03-2018 IPR010650 PrkA C-terminal domain AM460_RS16080 7d791ccfa3356359facd9673f209c23a 644 Pfam PF08298 PrkA AAA domain 20 380 2.2E-180 T 29-03-2018 IPR013153 PrkA AAA domain AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 SUPERFAMILY SSF55785 87 195 1.54E-10 T 29-03-2018 IPR000014 PAS domain AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 SMART SM00091 98 165 1.3E-5 T 29-03-2018 IPR000014 PAS domain AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 421 1.6E-139 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 SUPERFAMILY SSF55874 259 423 8.38E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 Gene3D G3DSA:1.10.287.130 209 265 2.1E-18 T 29-03-2018 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 Gene3D G3DSA:3.30.450.20 97 208 7.0E-14 T 29-03-2018 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 4.5E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 Pfam PF00989 PAS fold 99 194 1.2E-10 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 SUPERFAMILY SSF47384 190 268 1.77E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 Gene3D G3DSA:3.30.565.10 274 431 6.7E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 SMART SM00387 313 425 2.1E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 5.4E-26 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 SMART SM00388 203 269 7.3E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS24370 78e25d47547fb9de483b967f988987cd 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 2.1E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 2.5E-29 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 Gene3D G3DSA:3.40.50.10380 5 160 6.9E-37 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.5E-102 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 SUPERFAMILY SSF53223 10 161 2.16E-54 T 29-03-2018 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.3E-19 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 PIRSF PIRSF036684 1 758 0.0 T 29-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 SMART SM01274 18 151 2.4E-83 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 SUPERFAMILY SSF53659 430 754 1.97E-92 T 29-03-2018 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 SUPERFAMILY SSF51735 163 453 2.08E-86 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 Gene3D G3DSA:3.40.50.10750 573 727 2.9E-51 T 29-03-2018 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 Gene3D G3DSA:3.40.50.720 161 448 1.1E-84 T 29-03-2018 AM460_RS12070 98fd3b2f455fe6bdc64fada648c6d2a3 759 SMART SM00919 163 401 9.7E-142 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM460_RS09385 2b68a56e970a5df33f6770665e758a03 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 8.7E-105 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM460_RS09385 2b68a56e970a5df33f6770665e758a03 234 Gene3D G3DSA:3.20.20.10 1 234 4.0E-70 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS09385 2b68a56e970a5df33f6770665e758a03 234 SUPERFAMILY SSF51419 1 227 1.57E-79 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS09385 2b68a56e970a5df33f6770665e758a03 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 1.6E-29 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS09385 2b68a56e970a5df33f6770665e758a03 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM460_RS09385 2b68a56e970a5df33f6770665e758a03 234 PIRSF PIRSF004848 1 234 1.6E-74 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Gene3D G3DSA:3.40.50.740 648 789 1.2E-33 T 29-03-2018 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1124 1151 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Gene3D G3DSA:3.40.228.10 225 647 1.9E-103 T 29-03-2018 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 SMART SM00926 43 105 1.9E-7 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 SUPERFAMILY SSF50692 1082 1235 1.42E-45 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1199 4.5E-20 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Gene3D G3DSA:2.20.25.90 55 98 4.6E-28 T 29-03-2018 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Gene3D G3DSA:4.10.1200.10 1 26 6.3E-14 T 29-03-2018 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 7.5E-16 T 29-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Gene3D G3DSA:2.40.40.20 1047 1237 1.6E-45 T 29-03-2018 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 832 2.7E-167 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 29-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Gene3D G3DSA:3.40.50.740 108 213 8.8E-4 T 29-03-2018 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 Gene3D G3DSA:3.30.2070.10 794 834 3.0E-5 T 29-03-2018 AM460_RS17545 5eeb9722ff441ce9d89fbb6840f69dc1 1246 SUPERFAMILY SSF53706 5 1070 0.0 T 29-03-2018 AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 Gene3D G3DSA:3.30.70.20 34 82 1.7E-9 T 29-03-2018 AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 Pfam PF02754 Cysteine-rich domain 303 385 3.0E-13 T 29-03-2018 IPR004017 Cysteine-rich domain AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 Pfam PF02754 Cysteine-rich domain 170 255 5.6E-13 T 29-03-2018 IPR004017 Cysteine-rich domain AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 Gene3D G3DSA:3.30.70.20 5 33 0.012 T 29-03-2018 AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 Gene3D G3DSA:3.30.70.20 83 221 0.0029 T 29-03-2018 AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 PIRSF PIRSF000139 5 407 3.0E-143 T 29-03-2018 AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 SUPERFAMILY SSF54862 12 125 3.89E-21 T 29-03-2018 AM460_RS08705 e760fd85bff3fb0c00d22ba8390e5af4 407 Pfam PF13183 4Fe-4S dicluster domain 22 89 2.4E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 29-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 413 453 4.3E-8 T 29-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 SUPERFAMILY SSF49899 337 467 7.2E-21 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 Gene3D G3DSA:2.115.10.20 36 370 3.0E-94 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 SUPERFAMILY SSF75005 22 337 5.57E-104 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 Gene3D G3DSA:2.60.120.560 381 463 2.9E-10 T 29-03-2018 AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 15 442 1.1E-165 T 29-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 SMART SM00640 31 432 9.9E-128 T 29-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AM460_RS10390 33316cf875c20577d1707a17ef35a64a 469 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 8.4E-98 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AM460_RS26480 b58bb23d312765818733ae2729eeec4c 517 Pfam PF00437 Type II/IV secretion system protein 97 373 4.0E-42 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM460_RS26480 b58bb23d312765818733ae2729eeec4c 517 SUPERFAMILY SSF52540 73 503 2.21E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS26480 b58bb23d312765818733ae2729eeec4c 517 Gene3D G3DSA:3.40.50.300 198 512 9.2E-36 T 29-03-2018 AM460_RS26480 b58bb23d312765818733ae2729eeec4c 517 Gene3D G3DSA:3.30.450.90 51 195 1.5E-20 T 29-03-2018 AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 SMART SM00642 130 558 5.6E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 Pfam PF00128 Alpha amylase, catalytic domain 185 357 6.5E-10 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 SUPERFAMILY SSF81296 7 144 7.0E-47 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 SUPERFAMILY SSF51445 130 463 3.19E-126 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 SUPERFAMILY SSF51445 492 564 3.19E-126 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 629 1.1E-268 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 97 2.4E-20 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 Gene3D G3DSA:2.60.40.10 1 133 8.9E-46 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 Gene3D G3DSA:3.20.20.80 134 572 2.6E-107 T 29-03-2018 AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 Gene3D G3DSA:2.60.40.1180 573 657 5.1E-8 T 29-03-2018 AM460_RS06240 0e0133277845349a92625bedc43b8b2d 657 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 76.041 T 29-03-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 AM460_RS09325 942656c075cbe0d7989ebcf0cc018006 239 Pfam PF02390 Putative methyltransferase 64 233 6.0E-62 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM460_RS09325 942656c075cbe0d7989ebcf0cc018006 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.392 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM460_RS09325 942656c075cbe0d7989ebcf0cc018006 239 Gene3D G3DSA:3.40.50.150 30 239 8.4E-27 T 29-03-2018 AM460_RS09325 942656c075cbe0d7989ebcf0cc018006 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 8.1E-76 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM460_RS09325 942656c075cbe0d7989ebcf0cc018006 239 SUPERFAMILY SSF53335 18 237 6.65E-38 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00930 659d1a534196ae2b50a2c14b5111eacc 84 SUPERFAMILY SSF53448 5 84 5.16E-20 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS00930 659d1a534196ae2b50a2c14b5111eacc 84 Pfam PF00535 Glycosyl transferase family 2 8 83 2.3E-17 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS00930 659d1a534196ae2b50a2c14b5111eacc 84 Gene3D G3DSA:3.90.550.10 5 84 1.6E-20 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS01420 d7fc1de813bf25ba8fb5f338e2ed8996 167 Pfam PF00583 Acetyltransferase (GNAT) family 49 144 1.9E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS01420 d7fc1de813bf25ba8fb5f338e2ed8996 167 Gene3D G3DSA:3.40.630.30 4 164 1.6E-26 T 29-03-2018 AM460_RS01420 d7fc1de813bf25ba8fb5f338e2ed8996 167 SUPERFAMILY SSF55729 10 166 2.92E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS27105 3d52d0139e504ef0f9af86428275e92c 127 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 126 4.0E-68 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 AM460_RS27105 3d52d0139e504ef0f9af86428275e92c 127 SUPERFAMILY SSF47729 2 56 8.12E-25 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS27105 3d52d0139e504ef0f9af86428275e92c 127 Pfam PF05261 TraM protein, DNA-binding 1 126 5.9E-60 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 AM460_RS27105 3d52d0139e504ef0f9af86428275e92c 127 Gene3D G3DSA:1.10.10.450 3 56 4.2E-27 T 29-03-2018 AM460_RS27105 3d52d0139e504ef0f9af86428275e92c 127 SUPERFAMILY SSF140581 60 126 5.36E-28 T 29-03-2018 AM460_RS23930 e6a5194f8550099d92331289e39f2028 159 Gene3D G3DSA:3.90.960.10 1 159 2.8E-45 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS23930 e6a5194f8550099d92331289e39f2028 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 6.3E-58 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM460_RS23930 e6a5194f8550099d92331289e39f2028 159 PIRSF PIRSF006181 1 159 2.4E-60 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM460_RS23930 e6a5194f8550099d92331289e39f2028 159 SUPERFAMILY SSF55826 2 155 9.03E-46 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS23930 e6a5194f8550099d92331289e39f2028 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 2.0E-23 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 Pfam PF00773 RNB domain 189 516 3.9E-85 T 29-03-2018 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.209 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 SUPERFAMILY SSF50249 560 643 1.11E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 SUPERFAMILY SSF50249 8 80 1.39E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 Gene3D G3DSA:2.40.50.140 558 644 9.4E-7 T 29-03-2018 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 SUPERFAMILY SSF50249 83 171 9.42E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 Pfam PF08206 Ribonuclease B OB domain 24 80 2.5E-19 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 Pfam PF00575 S1 RNA binding domain 559 636 2.2E-10 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 SUPERFAMILY SSF50249 176 556 1.83E-116 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 SMART SM00955 189 517 3.0E-129 T 29-03-2018 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 SMART SM00357 23 79 1.7E-15 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 Gene3D G3DSA:2.40.50.140 22 74 0.47 T 29-03-2018 AM460_RS18200 ff63147d6002ab9a513837dc4fde909c 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 3.7E-255 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 PIRSF PIRSF001430 9 260 4.8E-77 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 6.8E-82 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 Pfam PF01416 tRNA pseudouridine synthase 17 111 1.4E-9 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 1.9E-28 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.91 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 Gene3D G3DSA:3.30.70.580 8 113 1.9E-35 T 29-03-2018 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 Gene3D G3DSA:3.30.70.660 114 251 2.5E-38 T 29-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS12750 7538c5e9db96c635b4488a198b19d824 270 SUPERFAMILY SSF55120 9 265 1.34E-93 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 716 733 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 Pfam PF00593 TonB dependent receptor 238 730 1.1E-30 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 46 733 3.4E-191 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 Gene3D G3DSA:2.40.170.20 154 733 4.5E-53 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 146 2.7E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 Gene3D G3DSA:2.170.130.10 22 153 2.2E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 SUPERFAMILY SSF56935 31 437 1.01E-92 T 29-03-2018 AM460_RS09145 46df06ef6be2c074f879d7d61561538e 733 SUPERFAMILY SSF56935 468 731 1.01E-92 T 29-03-2018 AM460_RS06140 37548f635b68dea3138128a61e47bfbc 237 SMART SM00382 30 216 6.7E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06140 37548f635b68dea3138128a61e47bfbc 237 SUPERFAMILY SSF52540 4 234 8.31E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06140 37548f635b68dea3138128a61e47bfbc 237 Gene3D G3DSA:3.40.50.300 1 237 9.2E-60 T 29-03-2018 AM460_RS06140 37548f635b68dea3138128a61e47bfbc 237 Pfam PF00005 ABC transporter 21 165 2.5E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS06140 37548f635b68dea3138128a61e47bfbc 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS06140 37548f635b68dea3138128a61e47bfbc 237 PIRSF PIRSF039137 1 237 5.2E-104 T 29-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 Gene3D G3DSA:3.30.70.120 1 108 8.8E-50 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 SUPERFAMILY SSF54913 1 112 8.58E-47 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 PIRSF PIRSF039144 1 112 1.2E-57 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 2 17 2.3E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 52 75 2.3E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 23 41 2.3E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 83 103 2.3E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS11645 8ceb698f0aa0b9491fc60d01c78bde64 112 SMART SM00938 4 105 4.1E-68 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM460_RS21555 3df0758994a67555ac15749a0d48b611 330 SUPERFAMILY SSF56349 61 315 1.8E-47 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS21555 3df0758994a67555ac15749a0d48b611 330 Gene3D G3DSA:1.10.150.130 55 164 9.2E-14 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS21555 3df0758994a67555ac15749a0d48b611 330 Pfam PF00589 Phage integrase family 164 306 2.4E-17 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS21555 3df0758994a67555ac15749a0d48b611 330 Gene3D G3DSA:1.10.443.10 165 322 7.2E-32 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 37 5.4E-6 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PIRSF PIRSF000310 2 367 3.9E-136 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 365 5.3E-197 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 303 1.2E-26 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 Gene3D G3DSA:4.10.480.10 232 309 3.3E-29 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 SUPERFAMILY SSF56770 44 302 1.07E-84 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 3.2E-32 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 Gene3D G3DSA:3.40.50.700 42 231 6.1E-54 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 3.6E-69 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 3.6E-69 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 3.6E-69 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 3.6E-69 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 3.6E-69 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 3.6E-69 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 3.6E-69 T 29-03-2018 AM460_RS08570 031222ff536075ab9244dc6a33f00b44 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 3.6E-69 T 29-03-2018 AM460_RS00740 2bcf7b611c2643596b36574e81cc98ca 255 Gene3D G3DSA:3.30.420.40 1 92 0.0039 T 29-03-2018 AM460_RS00740 2bcf7b611c2643596b36574e81cc98ca 255 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 247 1.4E-108 T 29-03-2018 IPR008275 CoA enzyme activase AM460_RS00740 2bcf7b611c2643596b36574e81cc98ca 255 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 247 6.2E-68 T 29-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AM460_RS00740 2bcf7b611c2643596b36574e81cc98ca 255 SUPERFAMILY SSF53067 3 246 7.84E-32 T 29-03-2018 AM460_RS00740 2bcf7b611c2643596b36574e81cc98ca 255 Gene3D G3DSA:3.30.420.40 93 233 5.0E-33 T 29-03-2018 AM460_RS26290 79077e7153bc14b0cd47581bd42f5446 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.5E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM460_RS26290 79077e7153bc14b0cd47581bd42f5446 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.5E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM460_RS26290 79077e7153bc14b0cd47581bd42f5446 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.5E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM460_RS26290 79077e7153bc14b0cd47581bd42f5446 164 Pfam PF01252 Signal peptidase (SPase) II 16 155 1.9E-36 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM460_RS26290 79077e7153bc14b0cd47581bd42f5446 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.032 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM460_RS26290 79077e7153bc14b0cd47581bd42f5446 164 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM460_RS26290 79077e7153bc14b0cd47581bd42f5446 164 TIGRFAM TIGR00077 lspA: signal peptidase II 1 164 3.9E-61 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM460_RS10460 4e76b0a8835abd323c7c3d04969157fd 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 121 7.1E-34 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM460_RS10460 4e76b0a8835abd323c7c3d04969157fd 121 Gene3D G3DSA:3.30.479.10 1 121 4.6E-40 T 29-03-2018 AM460_RS10460 4e76b0a8835abd323c7c3d04969157fd 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 6 97 6.3E-33 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM460_RS10460 4e76b0a8835abd323c7c3d04969157fd 121 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 4 120 1.3E-38 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM460_RS10460 4e76b0a8835abd323c7c3d04969157fd 121 PIRSF PIRSF006113 1 121 1.3E-56 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM460_RS10460 4e76b0a8835abd323c7c3d04969157fd 121 SUPERFAMILY SSF55620 1 120 1.78E-40 T 29-03-2018 AM460_RS24145 d0ef553e5d2c8cb69946942eae828262 231 Gene3D G3DSA:3.40.50.620 1 231 6.2E-57 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS24145 d0ef553e5d2c8cb69946942eae828262 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 53.608 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM460_RS24145 d0ef553e5d2c8cb69946942eae828262 231 SUPERFAMILY SSF52402 1 221 9.48E-72 T 29-03-2018 AM460_RS24145 d0ef553e5d2c8cb69946942eae828262 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 3.9E-89 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM460_RS24145 d0ef553e5d2c8cb69946942eae828262 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 3.8E-85 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM460_RS24145 d0ef553e5d2c8cb69946942eae828262 231 PIRSF PIRSF006293 1 226 1.4E-88 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM460_RS13925 11172e7d294e995b37b0ee0001ee7e2f 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 83 7.8E-11 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS13925 11172e7d294e995b37b0ee0001ee7e2f 94 SUPERFAMILY SSF52794 3 92 4.32E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS13925 11172e7d294e995b37b0ee0001ee7e2f 94 Gene3D G3DSA:3.40.50.2300 2 94 3.4E-20 T 29-03-2018 AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 Gene3D G3DSA:3.40.50.300 111 355 1.8E-63 T 29-03-2018 AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 SUPERFAMILY SSF52540 6 360 1.38E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 602 6.7E-198 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 Pfam PF13538 UvrD-like helicase C-terminal domain 534 579 7.9E-15 T 29-03-2018 IPR027785 UvrD-like helicase C-terminal domain AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 SUPERFAMILY SSF52540 281 378 7.97E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 SUPERFAMILY SSF52540 434 602 7.97E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 Gene3D G3DSA:3.40.50.300 365 593 3.6E-41 T 29-03-2018 AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 Pfam PF13604 AAA domain 155 318 2.2E-32 T 29-03-2018 AM460_RS10005 d0ae9b06bb605a1f7b73b1d4372975e4 608 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 602 55.583 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM460_RS11360 9ecd1f858bc482a4a55c1dbcfadbeb7b 408 SUPERFAMILY SSF55073 254 402 5.1E-35 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS11360 9ecd1f858bc482a4a55c1dbcfadbeb7b 408 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 403 8.8E-45 T 29-03-2018 IPR000160 GGDEF domain AM460_RS11360 9ecd1f858bc482a4a55c1dbcfadbeb7b 408 SMART SM00267 238 408 9.0E-58 T 29-03-2018 IPR000160 GGDEF domain AM460_RS11360 9ecd1f858bc482a4a55c1dbcfadbeb7b 408 Gene3D G3DSA:3.30.70.270 237 408 2.4E-44 T 29-03-2018 AM460_RS11360 9ecd1f858bc482a4a55c1dbcfadbeb7b 408 Pfam PF17152 Periplasmic sensor domain 45 145 1.4E-29 T 29-03-2018 IPR033417 Periplasmic sensor domain CHASE8 AM460_RS11360 9ecd1f858bc482a4a55c1dbcfadbeb7b 408 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 405 1.1E-34 T 29-03-2018 IPR000160 GGDEF domain AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00072 Response regulator receiver domain 4 114 4.1E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:1.10.10.10 121 204 1.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:3.40.50.2300 1 120 2.6E-22 T 29-03-2018 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 198 8.2E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF52172 1 124 1.85E-23 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00421 141 198 2.1E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF46894 134 202 1.73E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 7.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 7.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 7.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS12490 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00448 1 113 1.1E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS19285 9e7b12b9a59641c13313510dcd70d72a 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS19285 9e7b12b9a59641c13313510dcd70d72a 252 SUPERFAMILY SSF52540 8 221 1.78E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19285 9e7b12b9a59641c13313510dcd70d72a 252 Pfam PF00005 ABC transporter 19 167 2.2E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS19285 9e7b12b9a59641c13313510dcd70d72a 252 SMART SM00382 28 216 2.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS19285 9e7b12b9a59641c13313510dcd70d72a 252 Gene3D G3DSA:3.40.50.300 1 249 1.8E-56 T 29-03-2018 AM460_RS06580 03f58a7009ebbdd8f41b157d962431a9 393 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 31.148 T 29-03-2018 IPR023528 Major facilitator superfamily transporter, TsgA AM460_RS06580 03f58a7009ebbdd8f41b157d962431a9 393 SUPERFAMILY SSF103473 4 385 8.5E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS06580 03f58a7009ebbdd8f41b157d962431a9 393 Gene3D G3DSA:1.20.1250.20 1 202 6.8E-19 T 29-03-2018 AM460_RS06580 03f58a7009ebbdd8f41b157d962431a9 393 Pfam PF07690 Major Facilitator Superfamily 14 319 9.4E-22 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS06580 03f58a7009ebbdd8f41b157d962431a9 393 Gene3D G3DSA:1.20.1250.20 207 392 1.4E-14 T 29-03-2018 AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 1.8E-33 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 3.3E-23 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 3.3E-23 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.3E-23 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 3.3E-23 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 SUPERFAMILY SSF159127 1 86 1.96E-28 T 29-03-2018 AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 Pfam PF01455 HupF/HypC family 1 71 3.1E-26 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS10630 7d03db32baa353bf74d064d746359a3b 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 29-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site AM460_RS10225 bf4b447bd2f3097b62a413fb7083ab2e 75 Gene3D G3DSA:2.30.30.100 22 73 7.6E-33 T 29-03-2018 AM460_RS10225 bf4b447bd2f3097b62a413fb7083ab2e 75 SUPERFAMILY SSF50182 23 73 4.85E-20 T 29-03-2018 IPR010920 LSM domain AM460_RS10225 bf4b447bd2f3097b62a413fb7083ab2e 75 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 5.0E-25 T 29-03-2018 IPR010305 Protein of unknown function DUF903 AM460_RS07910 553f30fb0ab683e5055a9f9d0390511d 436 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 433 35.151 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 AM460_RS07910 553f30fb0ab683e5055a9f9d0390511d 436 Pfam PF03313 Serine dehydratase alpha chain 178 428 7.1E-49 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM460_RS07910 553f30fb0ab683e5055a9f9d0390511d 436 PIRSF PIRSF006054 5 435 2.1E-184 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 AM460_RS07910 553f30fb0ab683e5055a9f9d0390511d 436 Gene3D G3DSA:1.10.4100.10 264 419 1.0E-8 T 29-03-2018 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 Gene3D G3DSA:1.10.1660.10 58 141 7.9E-26 T 29-03-2018 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 Gene3D G3DSA:1.10.1660.10 1 57 4.4E-24 T 29-03-2018 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 1.8E-61 T 29-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 9.4E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 9.4E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 9.4E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 6.5E-21 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 SUPERFAMILY SSF46955 2 121 1.9E-35 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 SMART SM00422 2 71 2.1E-34 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS06960 91d525c525296a67e7333edfd59c048d 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 SUPERFAMILY SSF51658 4 438 2.18E-172 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 133 153 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 229 253 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 156 175 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 180 201 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 300 311 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 271 298 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 92 114 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 333 344 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 PRINTS PR00688 Xylose isomerase signature 207 226 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 Gene3D G3DSA:3.20.20.150 2 440 2.0E-110 T 29-03-2018 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 54.103 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS05430 c5a23f0b677d5b9786081b32e11d7c42 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 7.5E-221 T 29-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM460_RS19995 d1e6c349459b016cf11ec746b5b05d22 320 Gene3D G3DSA:3.10.350.10 41 99 4.4E-8 T 29-03-2018 AM460_RS19995 d1e6c349459b016cf11ec746b5b05d22 320 SMART SM00257 45 91 2.9E-7 T 29-03-2018 IPR018392 LysM domain AM460_RS19995 d1e6c349459b016cf11ec746b5b05d22 320 Gene3D G3DSA:2.40.440.10 100 242 2.0E-29 T 29-03-2018 AM460_RS19995 d1e6c349459b016cf11ec746b5b05d22 320 Pfam PF01476 LysM domain 47 91 1.3E-7 T 29-03-2018 IPR018392 LysM domain AM460_RS19995 d1e6c349459b016cf11ec746b5b05d22 320 Pfam PF03734 L,D-transpeptidase catalytic domain 103 240 1.9E-19 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM460_RS19995 d1e6c349459b016cf11ec746b5b05d22 320 SUPERFAMILY SSF141523 101 240 3.14E-28 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 1 19 0.014 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 20 57 2.0E-8 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 58 71 0.026 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 133 155 0.037 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 72 92 1.4E-11 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 93 132 3.6E-12 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 SUPERFAMILY SSF54862 4 154 4.5E-41 T 29-03-2018 AM460_RS09760 81305d6bc68d9b3ef16489279235fc8c 162 Pfam PF13247 4Fe-4S dicluster domain 51 140 7.8E-13 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 605 695 2.22E-6 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 1054 1171 6.67E-24 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 702 795 9.5E-10 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 796 874 2.6E-12 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 1310 1346 7.32E-6 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF54523 1283 1291 6.28E-26 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF54523 1356 1447 6.28E-26 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 1215 1293 6.15E-18 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 163 258 2.09E-15 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.6E-9 T 29-03-2018 IPR024973 ESPR domain AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 475 502 2.7E-8 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1151 1192 8.8E-11 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 768 802 1.6E-9 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 858 902 2.9E-11 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 523 551 1.0E-10 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1015 1053 2.8E-8 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 367 405 1.6E-6 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 669 712 9.5E-11 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1325 1356 6.7E-8 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1272 1296 5.6E-11 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 572 614 8.3E-9 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 65 182 2.88E-17 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 718 792 2.35E-6 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 799 883 6.15E-8 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 459 500 2.48E-5 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 511 549 6.02E-7 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:1.20.5.170 542 566 6.0E-8 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:1.20.5.170 493 517 2.7E-8 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:1.20.5.170 875 918 5.2E-10 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:1.20.5.170 1169 1202 1.6E-8 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:1.20.5.170 388 437 6.0E-8 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:3.30.1300.30 1349 1447 1.0E-26 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF03895 YadA-like membrane anchor domain 1387 1447 2.5E-19 T 29-03-2018 IPR005594 YadA-like, C-terminal AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 518 541 1.7E-9 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 438 492 5.0E-7 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 1296 1348 4.8E-8 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 1203 1295 1.0E-22 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 253 387 1.1E-33 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 567 604 4.3E-7 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 1040 1168 8.9E-26 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 605 701 1.8E-8 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 559 597 3.27E-5 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 255 392 1.31E-28 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 158 245 9.7E-20 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 52 157 5.3E-17 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1228 1254 3.1E-7 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 198 224 5.8E-5 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 323 349 1.1E-7 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 91 111 1.2E-4 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 295 321 4.9E-6 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 930 956 4.1E-7 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 226 252 1.9E-4 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 128 154 1.1E-5 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Pfam PF05658 Head domain of trimeric autotransporter adhesin 267 293 4.2E-5 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 Gene3D G3DSA:2.150.10.10 919 1039 3.2E-20 T 29-03-2018 AM460_RS05245 a95a77196d936b3f7c9eff79d9fd4f52 1447 SUPERFAMILY SSF101967 912 1037 4.71E-17 T 29-03-2018 AM460_RS04490 3d5b7f08a6fc40f28ad8d1157f889b71 207 SUPERFAMILY SSF53335 4 204 1.69E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS04490 3d5b7f08a6fc40f28ad8d1157f889b71 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 1.8E-68 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM460_RS04490 3d5b7f08a6fc40f28ad8d1157f889b71 207 PIRSF PIRSF003078 1 207 4.1E-71 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM460_RS04490 3d5b7f08a6fc40f28ad8d1157f889b71 207 Gene3D G3DSA:3.40.50.150 1 207 1.3E-38 T 29-03-2018 AM460_RS04490 3d5b7f08a6fc40f28ad8d1157f889b71 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 5.3E-63 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM460_RS04490 3d5b7f08a6fc40f28ad8d1157f889b71 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.973 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 Pfam PF02378 Phosphotransferase system, EIIC 293 554 1.7E-8 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 Gene3D G3DSA:3.40.50.2300 165 264 5.1E-34 T 29-03-2018 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 1.3E-38 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 167 248 1.3E-23 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 Gene3D G3DSA:3.40.930.10 1 152 2.1E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 SUPERFAMILY SSF52794 166 261 6.98E-31 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 168 259 3.1E-16 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 621 1.1E-82 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 150 2.4E-32 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS22695 73d2ba6565745c4a42ab23ed69d4b24d 638 SUPERFAMILY SSF55804 1 149 1.83E-32 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Gene3D G3DSA:1.10.287.130 334 386 1.5E-13 T 29-03-2018 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 SUPERFAMILY SSF55874 408 546 7.33E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Gene3D G3DSA:3.30.450.20 41 173 9.7E-24 T 29-03-2018 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Pfam PF00989 PAS fold 225 285 4.0E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 539 3.8E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 SUPERFAMILY SSF55890 332 376 3.4E-8 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Pfam PF17203 Single cache domain 3 67 173 1.5E-21 T 29-03-2018 IPR033463 Single cache domain 3 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 9.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 9.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 9.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 9.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 373 3.9E-7 T 29-03-2018 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Gene3D G3DSA:3.30.450.20 207 333 5.4E-10 T 29-03-2018 AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 SMART SM00387 428 541 4.7E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 SMART SM00091 222 292 9.6E-9 T 29-03-2018 IPR000014 PAS domain AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 SUPERFAMILY SSF55785 223 277 3.84E-8 T 29-03-2018 IPR000014 PAS domain AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 Gene3D G3DSA:3.30.565.10 403 551 6.7E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23290 13d6cb68ccae97572c69f1a06afa1d03 552 SUPERFAMILY SSF103190 52 178 3.14E-33 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM460_RS17900 7996e4740def7f81d1b9079bbf4de812 83 Pfam PF00589 Phage integrase family 10 63 3.3E-10 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS17900 7996e4740def7f81d1b9079bbf4de812 83 SUPERFAMILY SSF56349 7 78 1.27E-15 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS17900 7996e4740def7f81d1b9079bbf4de812 83 Gene3D G3DSA:1.10.443.10 2 83 3.1E-15 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS01650 0c625ea629b944a8bfa50967e063bd0c 470 Pfam PF00324 Amino acid permease 27 468 2.6E-124 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS01650 0c625ea629b944a8bfa50967e063bd0c 470 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS01650 0c625ea629b944a8bfa50967e063bd0c 470 PIRSF PIRSF006060 1 469 9.0E-69 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS10915 a29f59ebafce7e0553309b9794d32327 136 PIRSF PIRSF005087 1 136 6.9E-56 T 29-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM460_RS10915 a29f59ebafce7e0553309b9794d32327 136 SUPERFAMILY SSF52218 2 131 9.02E-24 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10915 a29f59ebafce7e0553309b9794d32327 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 1.1E-62 T 29-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM460_RS10915 a29f59ebafce7e0553309b9794d32327 136 Gene3D G3DSA:3.40.50.360 4 131 7.2E-26 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10915 a29f59ebafce7e0553309b9794d32327 136 Pfam PF07972 NrdI Flavodoxin like 5 122 2.2E-48 T 29-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM460_RS10915 a29f59ebafce7e0553309b9794d32327 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.973 T 29-03-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial AM460_RS25435 6dc7d1e6e71851bc200d82e5e465a683 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 8.5E-82 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM460_RS25435 6dc7d1e6e71851bc200d82e5e465a683 252 SUPERFAMILY SSF64005 18 239 3.27E-88 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM460_RS25435 6dc7d1e6e71851bc200d82e5e465a683 252 Gene3D G3DSA:3.40.1180.10 7 247 1.8E-92 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM460_RS25435 6dc7d1e6e71851bc200d82e5e465a683 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 6.5E-108 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM460_RS25435 6dc7d1e6e71851bc200d82e5e465a683 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 40.266 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM460_RS25435 6dc7d1e6e71851bc200d82e5e465a683 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 29-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 AM460_RS16750 5d910cc092339510027ffbbca7df046b 403 Pfam PF07690 Major Facilitator Superfamily 14 341 2.9E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS16750 5d910cc092339510027ffbbca7df046b 403 Gene3D G3DSA:1.20.1250.20 4 193 4.3E-31 T 29-03-2018 AM460_RS16750 5d910cc092339510027ffbbca7df046b 403 SUPERFAMILY SSF103473 5 379 2.35E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS16750 5d910cc092339510027ffbbca7df046b 403 Gene3D G3DSA:1.20.1250.20 194 386 7.3E-13 T 29-03-2018 AM460_RS16750 5d910cc092339510027ffbbca7df046b 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 382 3.7E-147 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 4.0E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 4.0E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 4.0E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 258 9.6E-56 T 29-03-2018 AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 SUPERFAMILY SSF51735 17 260 2.9E-76 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 Gene3D G3DSA:3.40.50.720 11 261 1.0E-65 T 29-03-2018 AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 4.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 4.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10420 43b9bc7813acb96dc35d025dba3b1ce5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF47794 429 492 9.58E-18 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:1.10.150.20 427 495 2.3E-16 T 29-03-2018 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:1.10.150.20 352 421 3.6E-15 T 29-03-2018 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.1480.10 1 128 1.1E-45 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 SMART SM00316 133 200 7.7E-9 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF08529 NusA N-terminal domain 4 123 1.5E-37 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.300.20 278 347 1.9E-12 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF00575 S1 RNA binding domain 134 195 1.6E-4 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.9E-9 T 29-03-2018 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF54814 201 278 3.73E-29 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:2.40.50.140 129 198 1.3E-13 T 29-03-2018 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF69705 1 126 1.96E-41 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.2E-18 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF47794 355 414 3.61E-17 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.272 T 29-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF50249 132 199 2.03E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF13184 NusA-like KH domain 230 297 1.6E-27 T 29-03-2018 IPR025249 KH domain, NusA-like GO:0003723 AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.300.20 199 276 6.2E-33 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS07610 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.7E-130 T 29-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF52540 90 371 1.49E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:2.40.50.140 49 116 6.0E-32 T 29-03-2018 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 SMART SM00382 170 355 5.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF68912 1 46 2.0E-12 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.2E-223 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.1E-23 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.3E-17 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 SMART SM00357 52 118 9.6E-19 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.1E-32 T 29-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:1.10.720.10 1 43 1.9E-13 T 29-03-2018 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.259 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:3.40.50.300 129 419 3.8E-58 T 29-03-2018 AM460_RS04280 e130092e41361244e8362f098cdd0a85 419 SMART SM00959 5 47 6.9E-18 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM460_RS10560 fcee11e1d1a42e7adb569b8b75e10085 347 SUPERFAMILY SSF56281 66 289 8.78E-35 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS10560 fcee11e1d1a42e7adb569b8b75e10085 347 Pfam PF00753 Metallo-beta-lactamase superfamily 82 241 1.2E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS10560 fcee11e1d1a42e7adb569b8b75e10085 347 Gene3D G3DSA:3.60.15.10 55 282 3.3E-26 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS10560 fcee11e1d1a42e7adb569b8b75e10085 347 SMART SM00849 81 256 1.0E-19 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS22585 a975929e6d935277bc4ef442e34a2c6e 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 25 341 2.4E-129 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM460_RS22585 a975929e6d935277bc4ef442e34a2c6e 347 Gene3D G3DSA:3.40.50.10800 115 208 1.7E-19 T 29-03-2018 AM460_RS22585 a975929e6d935277bc4ef442e34a2c6e 347 SUPERFAMILY SSF142754 28 341 5.75E-108 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM460_RS22585 a975929e6d935277bc4ef442e34a2c6e 347 Gene3D G3DSA:3.40.50.10800 209 323 1.9E-31 T 29-03-2018 AM460_RS22585 a975929e6d935277bc4ef442e34a2c6e 347 Gene3D G3DSA:3.40.50.10800 25 110 1.1E-17 T 29-03-2018 AM460_RS22585 a975929e6d935277bc4ef442e34a2c6e 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 72.13 T 29-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM460_RS22585 a975929e6d935277bc4ef442e34a2c6e 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 2.2E-104 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF54534 283 385 1.37E-32 T 29-03-2018 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:3.10.50.40 279 386 3.4E-32 T 29-03-2018 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:3.10.50.40 163 278 8.2E-24 T 29-03-2018 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:1.10.4030.10 21 148 3.2E-24 T 29-03-2018 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 Pfam PF13616 PPIC-type PPIASE domain 282 383 2.5E-26 T 29-03-2018 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.445 T 29-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 Pfam PF00639 PPIC-type PPIASE domain 178 272 2.5E-21 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 Pfam PF09312 SurA N-terminal domain 25 142 1.2E-45 T 29-03-2018 IPR015391 SurA N-terminal AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF54534 173 275 3.86E-28 T 29-03-2018 AM460_RS26135 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF109998 25 201 5.2E-43 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM460_RS14075 25821c03353de552501b821a8e98cb92 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 1.1E-97 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14075 25821c03353de552501b821a8e98cb92 361 Gene3D G3DSA:3.40.50.720 1 201 3.5E-37 T 29-03-2018 AM460_RS14075 25821c03353de552501b821a8e98cb92 361 Gene3D G3DSA:3.90.25.10 202 360 1.5E-49 T 29-03-2018 AM460_RS14075 25821c03353de552501b821a8e98cb92 361 SUPERFAMILY SSF51735 2 356 4.23E-91 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14075 25821c03353de552501b821a8e98cb92 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 343 7.2E-154 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM460_RS04510 75e7ada38e15a23c696fd31fc2f9e66b 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.1E-61 T 29-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AM460_RS04510 75e7ada38e15a23c696fd31fc2f9e66b 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.9E-40 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM460_RS04510 75e7ada38e15a23c696fd31fc2f9e66b 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.183 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM460_RS04510 75e7ada38e15a23c696fd31fc2f9e66b 156 SUPERFAMILY SSF81573 63 121 1.7E-15 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM460_RS04510 75e7ada38e15a23c696fd31fc2f9e66b 156 Gene3D G3DSA:1.20.5.620 62 122 1.1E-15 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 8.1E-72 T 29-03-2018 AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 Gene3D G3DSA:3.40.50.720 1 41 9.6E-10 T 29-03-2018 AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 Gene3D G3DSA:3.40.50.720 42 261 1.2E-69 T 29-03-2018 AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 1.6E-4 T 29-03-2018 AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.9E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS12200 016065b18cf4df19503ee7316d8497e9 263 SUPERFAMILY SSF51735 6 255 2.29E-86 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS22650 276909bad11653f10573295b1f373216 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 8.3E-94 T 29-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AM460_RS22650 276909bad11653f10573295b1f373216 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 7.4E-42 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM460_RS22500 5674bf727b894e1b4c15e949254c27d2 229 SUPERFAMILY SSF161098 6 220 6.54E-50 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22500 5674bf727b894e1b4c15e949254c27d2 229 Gene3D G3DSA:1.10.3720.10 4 226 3.8E-37 T 29-03-2018 AM460_RS22500 5674bf727b894e1b4c15e949254c27d2 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 3.1E-71 T 29-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AM460_RS22500 5674bf727b894e1b4c15e949254c27d2 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 215 6.5E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:3.40.50.1970 430 643 2.3E-50 T 29-03-2018 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 Pfam PF00171 Aldehyde dehydrogenase family 5 400 8.6E-29 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:3.40.605.10 1 231 3.7E-33 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 1.9E-114 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 SUPERFAMILY SSF53720 6 453 2.62E-85 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 PIRSF PIRSF000111 1 866 0.0 T 29-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:1.20.1090.10 644 868 5.1E-60 T 29-03-2018 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 SUPERFAMILY SSF56796 449 867 5.1E-119 T 29-03-2018 AM460_RS18850 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:3.40.309.10 232 404 5.1E-27 T 29-03-2018 AM460_RS14215 f105ea43e42b3b243636151faae0a517 309 Pfam PF03466 LysR substrate binding domain 89 290 4.5E-24 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS14215 f105ea43e42b3b243636151faae0a517 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14215 f105ea43e42b3b243636151faae0a517 309 SUPERFAMILY SSF53850 90 292 6.97E-26 T 29-03-2018 AM460_RS14215 f105ea43e42b3b243636151faae0a517 309 SUPERFAMILY SSF46785 5 88 4.08E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14215 f105ea43e42b3b243636151faae0a517 309 Gene3D G3DSA:3.40.190.10 90 178 8.3E-15 T 29-03-2018 AM460_RS14215 f105ea43e42b3b243636151faae0a517 309 Gene3D G3DSA:1.10.10.10 4 85 8.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14215 f105ea43e42b3b243636151faae0a517 309 Gene3D G3DSA:3.40.190.10 179 258 7.5E-6 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:2.30.38.10 879 956 2.4E-22 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF47336 1405 1475 5.61E-15 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:3.30.559.10 98 303 1.8E-20 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:3.30.559.10 1478 1673 1.4E-19 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF53335 1164 1326 3.73E-18 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 2.9E-9 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 4.2E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 1.0E-6 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:1.10.1200.10 1407 1477 2.3E-17 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF52777 117 289 1.56E-18 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF52777 296 536 1.22E-37 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0012 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.12 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF47336 21 124 3.89E-9 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Pfam PF08242 Methyltransferase domain 1182 1279 3.4E-9 T 29-03-2018 IPR013217 Methyltransferase type 12 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Pfam PF00501 AMP-binding enzyme 575 965 1.0E-92 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM460_RS14715 730b38525b74cd7384380320636b42da 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS14715 730b38525b74cd7384380320636b42da 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 5.6E-119 T 29-03-2018 IPR010071 Amino acid adenylation domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF47336 1946 2014 1.87E-9 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:3.40.50.980 715 875 8.7E-37 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Pfam PF00668 Condensation domain 1530 1905 6.7E-27 T 29-03-2018 IPR001242 Condensation domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Pfam PF00668 Condensation domain 150 535 3.4E-23 T 29-03-2018 IPR001242 Condensation domain AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF52777 1669 1908 5.0E-40 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:3.30.300.30 959 1079 3.8E-12 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:3.30.300.30 1321 1396 1.7E-11 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF56801 1344 1422 1.83E-137 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF56801 549 1018 1.83E-137 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:1.10.1200.10 1944 2019 1.6E-11 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:1.10.1200.10 20 97 7.3E-10 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:3.40.50.150 1080 1320 3.9E-16 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 Gene3D G3DSA:3.40.50.980 564 714 1.8E-38 T 29-03-2018 AM460_RS14715 730b38525b74cd7384380320636b42da 2035 SUPERFAMILY SSF52777 1489 1680 5.0E-20 T 29-03-2018 AM460_RS03235 ec85986b506c21460493b6a4f6aea66b 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 4.4E-191 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM460_RS03235 ec85986b506c21460493b6a4f6aea66b 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 9.2E-187 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM460_RS03235 ec85986b506c21460493b6a4f6aea66b 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM460_RS03235 ec85986b506c21460493b6a4f6aea66b 366 SUPERFAMILY SSF53335 6 363 1.09E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS03235 ec85986b506c21460493b6a4f6aea66b 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.711 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM460_RS03235 ec85986b506c21460493b6a4f6aea66b 366 Gene3D G3DSA:3.40.50.150 156 366 7.4E-35 T 29-03-2018 AM460_RS03235 ec85986b506c21460493b6a4f6aea66b 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM460_RS15280 29898162e7db26453e66d91322a72827 223 Pfam PF06323 Phage antitermination protein Q 7 210 1.2E-48 T 29-03-2018 IPR010455 Bacteriophage 82, GpQ AM460_RS15280 29898162e7db26453e66d91322a72827 223 ProDom PD038144 ANTITERMINATOR Q PROPHAGE TRANSCRIPTION ANTITERMINATION CP-933P GIFSY-1 ENCODED BY Q-LIKE 1 208 4.0E-28 T 29-03-2018 IPR010455 Bacteriophage 82, GpQ AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 SUPERFAMILY SSF53187 2 196 5.62E-85 T 29-03-2018 AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 SUPERFAMILY SSF53187 297 387 5.62E-85 T 29-03-2018 AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 Gene3D G3DSA:3.40.630.10 1 236 2.0E-50 T 29-03-2018 AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 Gene3D G3DSA:3.40.630.10 250 388 6.5E-19 T 29-03-2018 AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 Pfam PF07687 Peptidase dimerisation domain 184 280 3.4E-12 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 372 1.3E-107 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 Pfam PF01546 Peptidase family M20/M25/M40 72 384 2.1E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 PIRSF PIRSF005962 1 388 4.7E-124 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AM460_RS03255 a381ce319b3e457e6d390a0639644361 388 SUPERFAMILY SSF55031 182 295 2.22E-30 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS05980 ebb83c474031f34d381da3c9af661c6d 93 Gene3D G3DSA:3.40.50.2300 1 91 3.4E-19 T 29-03-2018 AM460_RS05980 ebb83c474031f34d381da3c9af661c6d 93 SUPERFAMILY SSF52794 4 91 4.03E-16 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS05980 ebb83c474031f34d381da3c9af661c6d 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 83 9.1E-11 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS27480 354b85e197953f1185e4bf9bea36aba6 86 ProDom PD028820 PLASMID TRBE CONJUGATIVE TRANSFER MEMBRANE TRANSMEMBRANE INNER 10 72 9.0E-29 T 29-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE AM460_RS27480 354b85e197953f1185e4bf9bea36aba6 86 Pfam PF11100 Conjugal transfer protein TrbE 12 71 7.9E-15 T 29-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 SUPERFAMILY SSF52540 508 653 1.5E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 SUPERFAMILY SSF52540 292 342 1.5E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 Gene3D G3DSA:3.40.50.300 457 630 7.1E-26 T 29-03-2018 AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 SMART SM00490 505 589 4.0E-22 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 SUPERFAMILY SSF50249 9 176 1.58E-42 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 2.7E-252 T 29-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 SMART SM00487 265 459 2.0E-31 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 Pfam PF00270 DEAD/DEAH box helicase 273 433 8.1E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 Gene3D G3DSA:3.40.50.300 250 456 4.5E-36 T 29-03-2018 AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 SUPERFAMILY SSF52540 206 453 3.93E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 Gene3D G3DSA:1.10.150.20 3 52 1.2E-4 T 29-03-2018 AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 Gene3D G3DSA:2.40.50.140 53 141 8.5E-12 T 29-03-2018 AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 Pfam PF17191 RecG wedge domain 15 171 1.0E-20 T 29-03-2018 IPR033454 RecG, wedge domain AM460_RS04990 fd8720ec4140e1f4127a62a6826c0693 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 7.0E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS16630 130dc4b0402a6112fcb71a3f29e4dea3 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS16630 130dc4b0402a6112fcb71a3f29e4dea3 248 SUPERFAMILY SSF52540 2 231 5.71E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS16630 130dc4b0402a6112fcb71a3f29e4dea3 248 SMART SM00382 26 223 7.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS16630 130dc4b0402a6112fcb71a3f29e4dea3 248 Gene3D G3DSA:3.40.50.300 1 248 2.3E-45 T 29-03-2018 AM460_RS16630 130dc4b0402a6112fcb71a3f29e4dea3 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.8E-115 T 29-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AM460_RS16630 130dc4b0402a6112fcb71a3f29e4dea3 248 Pfam PF00005 ABC transporter 17 172 2.1E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS25895 f8c43d87ef5a27321b3eadb1fa29eea8 170 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 170 2.0E-87 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 AM460_RS25895 f8c43d87ef5a27321b3eadb1fa29eea8 170 Hamap MF_01332 Secretion monitor [secM]. 1 170 43.117 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 AM460_RS25895 f8c43d87ef5a27321b3eadb1fa29eea8 170 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 167 7.2E-55 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 AM460_RS25895 f8c43d87ef5a27321b3eadb1fa29eea8 170 PIRSF PIRSF004572 1 170 2.9E-85 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 AM460_RS25100 941260bdf8d0d400ea3256849a78f047 204 SUPERFAMILY SSF75620 3 196 3.27E-47 T 29-03-2018 AM460_RS25100 941260bdf8d0d400ea3256849a78f047 204 Pfam PF00472 RF-1 domain 106 191 4.5E-23 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM460_RS25100 941260bdf8d0d400ea3256849a78f047 204 Gene3D G3DSA:3.30.160.20 100 178 1.4E-24 T 29-03-2018 AM460_RS25100 941260bdf8d0d400ea3256849a78f047 204 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 201 2.4E-99 T 29-03-2018 IPR017509 Putative peptide chain release factor H AM460_RS25100 941260bdf8d0d400ea3256849a78f047 204 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 115 131 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 29-03-2018 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 SUPERFAMILY SSF47413 10 67 7.88E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 Gene3D G3DSA:3.40.50.2300 184 320 3.4E-49 T 29-03-2018 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 1.1E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 SUPERFAMILY SSF53822 68 338 4.71E-92 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 Gene3D G3DSA:3.40.50.2300 63 183 2.0E-28 T 29-03-2018 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 Pfam PF13377 Periplasmic binding protein-like domain 176 337 1.2E-44 T 29-03-2018 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 Gene3D G3DSA:1.10.260.40 10 62 2.2E-19 T 29-03-2018 AM460_RS03405 0729e59ba0471c05dc33e54b525b437e 341 SMART SM00354 9 79 1.1E-30 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:3.40.190.10 179 262 7.3E-8 T 29-03-2018 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF46785 4 110 7.37E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:3.40.190.10 92 178 9.9E-34 T 29-03-2018 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF03466 LysR substrate binding domain 93 288 1.3E-11 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.997 T 29-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:1.10.10.10 2 83 1.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF53850 92 289 1.57E-18 T 29-03-2018 AM460_RS09595 83bddd0a987410c35d7911df4a93d36f 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 9.4E-113 T 29-03-2018 IPR017685 HTH-type transcriptional regulator ArgP AM460_RS03800 c807cf16dda9db235ed6b13ca07b8e45 328 Gene3D G3DSA:3.90.1200.10 112 320 1.6E-18 T 29-03-2018 AM460_RS03800 c807cf16dda9db235ed6b13ca07b8e45 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.88 T 29-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 AM460_RS03800 c807cf16dda9db235ed6b13ca07b8e45 328 SUPERFAMILY SSF56112 6 327 2.77E-92 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS03800 c807cf16dda9db235ed6b13ca07b8e45 328 Gene3D G3DSA:3.30.200.20 5 107 4.2E-19 T 29-03-2018 AM460_RS03800 c807cf16dda9db235ed6b13ca07b8e45 328 Pfam PF01636 Phosphotransferase enzyme family 32 259 1.8E-43 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM460_RS24070 d610ffcca924caf59a700500f8526a67 183 Pfam PF12464 Maltose acetyltransferase 7 57 1.4E-16 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM460_RS24070 d610ffcca924caf59a700500f8526a67 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 4.4E-11 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS24070 d610ffcca924caf59a700500f8526a67 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0042 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS24070 d610ffcca924caf59a700500f8526a67 183 Gene3D G3DSA:2.160.10.10 2 183 1.7E-54 T 29-03-2018 AM460_RS24070 d610ffcca924caf59a700500f8526a67 183 SMART SM01266 5 59 2.5E-21 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM460_RS24070 d610ffcca924caf59a700500f8526a67 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS24070 d610ffcca924caf59a700500f8526a67 183 SUPERFAMILY SSF51161 2 182 2.63E-55 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 PIRSF PIRSF000709 167 238 0.026 T 29-03-2018 AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 PIRSF PIRSF000709 3 116 2.1E-9 T 29-03-2018 AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 SMART SM00855 5 191 2.7E-28 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 SUPERFAMILY SSF53254 4 247 5.18E-78 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 Gene3D G3DSA:3.40.50.1240 2 250 1.1E-67 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.985 T 29-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 2.3E-130 T 29-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM460_RS22555 b44f939266db7350d7326798f5f7f138 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 2.3E-30 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 8.7E-111 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 SUPERFAMILY SSF51735 102 269 6.25E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 Gene3D G3DSA:3.40.50.10860 1 109 2.6E-37 T 29-03-2018 AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 SUPERFAMILY SSF53223 2 101 1.96E-32 T 29-03-2018 AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 190 3.8E-9 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 Gene3D G3DSA:3.40.50.720 110 272 9.5E-31 T 29-03-2018 AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 33.309 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM460_RS07015 3ceee88e76d5214c7c833bbb52b5768d 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 4.9E-24 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM460_RS20500 9c06a2e82e27cde1896b2f5a255c8ccd 382 SUPERFAMILY SSF51679 20 371 2.06E-79 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM460_RS20500 9c06a2e82e27cde1896b2f5a255c8ccd 382 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 20 379 70.687 T 29-03-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 AM460_RS20500 9c06a2e82e27cde1896b2f5a255c8ccd 382 Pfam PF00296 Luciferase-like monooxygenase 20 339 4.6E-70 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM460_RS20500 9c06a2e82e27cde1896b2f5a255c8ccd 382 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 20 373 3.4E-219 T 29-03-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 AM460_RS20500 9c06a2e82e27cde1896b2f5a255c8ccd 382 Gene3D G3DSA:3.20.20.30 18 380 5.1E-69 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Gene3D G3DSA:3.40.50.740 113 209 2.0E-12 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 SUPERFAMILY SSF50692 679 808 2.26E-38 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 SMART SM00926 49 108 2.2E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 10 808 0.0 T 29-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Gene3D G3DSA:3.40.228.10 210 475 5.7E-65 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 723 750 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Pfam PF01568 Molydopterin dinucleotide binding domain 687 800 1.7E-27 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Gene3D G3DSA:3.40.228.10 605 668 2.4E-13 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 49 108 1.1E-14 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 SUPERFAMILY SSF53706 50 688 7.2E-173 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Gene3D G3DSA:2.40.40.20 669 808 6.9E-37 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Gene3D G3DSA:3.90.55.10 534 604 8.3E-15 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Gene3D G3DSA:2.20.25.90 42 112 1.1E-18 T 29-03-2018 AM460_RS17165 54223d4ee0d3843269679f439b510dc5 808 Pfam PF00384 Molybdopterin oxidoreductase 111 566 2.7E-96 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 Gene3D G3DSA:3.20.20.80 1 464 3.5E-153 T 29-03-2018 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 SUPERFAMILY SSF51445 2 460 8.16E-161 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 Pfam PF00232 Glycosyl hydrolase family 1 2 459 3.4E-156 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 2.0E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 2.0E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 2.0E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 2.0E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 2.0E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS04590 f5edb9a9672e9f4871aaff7106d48210 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM460_RS27230 76e34b5f05f8c53c229e3415524b99eb 144 Pfam PF07128 Protein of unknown function (DUF1380) 1 136 9.9E-66 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 AM460_RS05385 f5ef854849275147dff9964a9a0b435e 282 Gene3D G3DSA:1.10.10.10 5 84 2.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05385 f5ef854849275147dff9964a9a0b435e 282 Pfam PF01614 Bacterial transcriptional regulator 143 268 5.4E-45 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS05385 f5ef854849275147dff9964a9a0b435e 282 SMART SM00346 23 113 6.4E-41 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS05385 f5ef854849275147dff9964a9a0b435e 282 Pfam PF09339 IclR helix-turn-helix domain 25 74 4.3E-14 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS05385 f5ef854849275147dff9964a9a0b435e 282 Gene3D G3DSA:3.30.450.40 91 282 3.7E-47 T 29-03-2018 IPR029016 GAF domain-like AM460_RS05385 f5ef854849275147dff9964a9a0b435e 282 SUPERFAMILY SSF55781 90 272 5.43E-46 T 29-03-2018 IPR029016 GAF domain-like AM460_RS05385 f5ef854849275147dff9964a9a0b435e 282 SUPERFAMILY SSF46785 24 97 1.3E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SMART SM00052 548 794 1.3E-124 T 29-03-2018 IPR001633 EAL domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Pfam PF00563 EAL domain 555 789 1.1E-67 T 29-03-2018 IPR001633 EAL domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SUPERFAMILY SSF55785 33 142 1.31E-19 T 29-03-2018 IPR000014 PAS domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Gene3D G3DSA:3.30.450.20 22 133 9.0E-17 T 29-03-2018 AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Gene3D G3DSA:3.30.450.20 134 387 1.6E-21 T 29-03-2018 AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SMART SM00086 96 136 0.0094 T 29-03-2018 IPR001610 PAC motif AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SMART SM00086 217 259 1.1E-5 T 29-03-2018 IPR001610 PAC motif AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SUPERFAMILY SSF141868 555 802 1.44E-82 T 29-03-2018 IPR001633 EAL domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SUPERFAMILY SSF55073 389 540 1.41E-27 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SMART SM00091 144 211 4.1E-7 T 29-03-2018 IPR000014 PAS domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SMART SM00091 20 86 5.4E-9 T 29-03-2018 IPR000014 PAS domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SUPERFAMILY SSF55785 151 258 9.42E-17 T 29-03-2018 IPR000014 PAS domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 385 533 3.1E-21 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Gene3D G3DSA:3.20.20.450 546 797 8.7E-92 T 29-03-2018 IPR001633 EAL domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Gene3D G3DSA:3.30.70.270 388 545 1.4E-33 T 29-03-2018 AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 PIRSF PIRSF005925 133 324 1.0E-22 T 29-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 PIRSF PIRSF005925 9 149 1.1E-22 T 29-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 PIRSF PIRSF005925 319 804 1.3E-153 T 29-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 SMART SM00267 373 538 7.4E-44 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 534 1.5E-14 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Pfam PF13426 PAS domain 32 133 8.8E-13 T 29-03-2018 IPR000014 PAS domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 Pfam PF13426 PAS domain 157 258 4.4E-11 T 29-03-2018 IPR000014 PAS domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 264 1.1E-14 T 29-03-2018 IPR000014 PAS domain AM460_RS17475 ddaaacf03e9f4cb775e5e1c6040224ad 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 134 1.2E-21 T 29-03-2018 IPR000014 PAS domain AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 21 388 1.5E-168 T 29-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 ProSitePatterns PS00480 Citrate synthase signature. 271 283 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 SUPERFAMILY SSF48256 22 382 6.67E-124 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 PIRSF PIRSF001369 15 389 4.3E-111 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 Pfam PF00285 Citrate synthase, C-terminal domain 22 370 7.2E-115 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 Gene3D G3DSA:1.10.580.10 28 368 9.5E-84 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 PRINTS PR00143 Citrate synthase signature 139 152 3.8E-37 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 PRINTS PR00143 Citrate synthase signature 211 239 3.8E-37 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 PRINTS PR00143 Citrate synthase signature 264 284 3.8E-37 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 PRINTS PR00143 Citrate synthase signature 321 337 3.8E-37 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 PRINTS PR00143 Citrate synthase signature 189 204 3.8E-37 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS24655 864262f089645ac0a30a46720d50c06f 389 PRINTS PR00143 Citrate synthase signature 341 355 3.8E-37 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:1.10.10.10 1 86 4.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 87 175 2.8E-21 T 29-03-2018 AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF46785 1 86 9.99E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF03466 LysR substrate binding domain 89 293 4.8E-54 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 176 264 4.7E-29 T 29-03-2018 AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF53850 89 295 4.5E-47 T 29-03-2018 AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS03265 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS10640 e0ef488a5fde62cb45115f4e5aaf1c66 116 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 116 3.0E-44 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS10640 e0ef488a5fde62cb45115f4e5aaf1c66 116 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 29-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AM460_RS10640 e0ef488a5fde62cb45115f4e5aaf1c66 116 Gene3D G3DSA:2.10.230.10 70 114 0.0013 T 29-03-2018 AM460_RS10640 e0ef488a5fde62cb45115f4e5aaf1c66 116 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 9.4E-30 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS10640 e0ef488a5fde62cb45115f4e5aaf1c66 116 PIRSF PIRSF004761 1 116 2.1E-36 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS10640 e0ef488a5fde62cb45115f4e5aaf1c66 116 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.726 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS05130 91c4495e82ef2731abd32233b78e371b 283 Gene3D G3DSA:3.90.1480.10 5 282 2.3E-39 T 29-03-2018 AM460_RS05130 91c4495e82ef2731abd32233b78e371b 283 TIGRFAM TIGR04437 WaaZ_KDO_III: 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ 6 256 8.8E-143 T 29-03-2018 IPR031026 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ AM460_RS05130 91c4495e82ef2731abd32233b78e371b 283 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 1 259 7.0E-136 T 29-03-2018 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 SMART SM00421 135 192 1.7E-25 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 Pfam PF00072 Response regulator receiver domain 4 112 2.5E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 Gene3D G3DSA:3.40.50.2300 1 123 1.2E-26 T 29-03-2018 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.8E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.8E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.8E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 Gene3D G3DSA:1.10.10.10 124 195 1.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 SUPERFAMILY SSF52172 1 125 7.54E-27 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 6.2E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 SUPERFAMILY SSF46894 130 193 4.42E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS04845 4aef5d5ffaa64bb81138a848c65b368b 196 SMART SM00448 2 112 4.8E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS07430 807399a263a7ef17d161ea3ef90afa6d 163 Gene3D G3DSA:3.40.930.10 8 157 2.6E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS07430 807399a263a7ef17d161ea3ef90afa6d 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 9.7E-37 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS07430 807399a263a7ef17d161ea3ef90afa6d 163 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 9.7E-63 T 29-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AM460_RS07430 807399a263a7ef17d161ea3ef90afa6d 163 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS07430 807399a263a7ef17d161ea3ef90afa6d 163 SUPERFAMILY SSF55804 9 155 2.75E-42 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS14490 416e39a6def0f6f53a9c7e32edb636ae 201 Pfam PF11726 Inovirus Gp2 24 199 2.7E-53 T 29-03-2018 AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 Gene3D G3DSA:1.10.260.40 7 62 5.5E-14 T 29-03-2018 AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 Gene3D G3DSA:3.40.50.2300 173 331 4.6E-37 T 29-03-2018 AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 SUPERFAMILY SSF53822 63 316 3.53E-61 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 Gene3D G3DSA:3.40.50.2300 63 172 3.9E-27 T 29-03-2018 AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 29-03-2018 AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 6.0E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 SMART SM00354 5 75 2.0E-26 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 8.6E-31 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM460_RS06200 3bc30c6e0efeb551e706ffa51cd07ed6 331 SUPERFAMILY SSF47413 5 62 5.63E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS20365 ff868b3e5174eae1e4b69f228cbb012e 151 Pfam PF07012 Curlin associated repeat 100 130 1.8E-8 T 29-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AM460_RS20365 ff868b3e5174eae1e4b69f228cbb012e 151 Pfam PF07012 Curlin associated repeat 53 86 5.6E-7 T 29-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AM460_RS20365 ff868b3e5174eae1e4b69f228cbb012e 151 Pfam PF07012 Curlin associated repeat 75 106 4.3E-10 T 29-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Gene3D G3DSA:1.10.268.10 341 480 3.5E-46 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 1.5E-133 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Gene3D G3DSA:3.90.199.10 31 212 4.8E-73 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 675 2.8E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 5.2E-4 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Gene3D G3DSA:3.30.1360.40 235 328 4.3E-23 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 SMART SM00434 8 458 1.3E-237 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 29-03-2018 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 SUPERFAMILY SSF56719 28 479 6.28E-153 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Gene3D G3DSA:2.120.10.90 492 738 5.9E-44 T 29-03-2018 AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 SUPERFAMILY SSF101904 494 736 1.26E-50 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM460_RS08435 0dc6ef6d5337b53a07ac4b0e0b7b22ba 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.18 T 29-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS01950 9ff5eaf3b5e90373d264af3cbbf03243 350 SUPERFAMILY SSF52540 114 340 5.55E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01950 9ff5eaf3b5e90373d264af3cbbf03243 350 Gene3D G3DSA:3.40.50.300 114 275 1.9E-24 T 29-03-2018 AM460_RS01950 9ff5eaf3b5e90373d264af3cbbf03243 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 334 1.4E-101 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM460_RS01950 9ff5eaf3b5e90373d264af3cbbf03243 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 340 37.989 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM460_RS01950 9ff5eaf3b5e90373d264af3cbbf03243 350 Gene3D G3DSA:1.10.40.50 277 345 3.8E-22 T 29-03-2018 AM460_RS01950 9ff5eaf3b5e90373d264af3cbbf03243 350 Gene3D G3DSA:2.40.50.140 35 102 5.6E-19 T 29-03-2018 AM460_RS01950 9ff5eaf3b5e90373d264af3cbbf03243 350 Pfam PF03193 RsgA GTPase 100 276 4.7E-57 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 4.4E-157 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Gene3D G3DSA:2.130.10.10 199 258 5.0E-9 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 SUPERFAMILY SSF52964 29 161 4.84E-40 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 SUPERFAMILY SSF69304 155 428 7.98E-56 T 29-03-2018 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.523 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0032 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.3E-5 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 4.4E-10 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.8E-9 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Gene3D G3DSA:2.130.10.150 259 429 2.0E-33 T 29-03-2018 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Gene3D G3DSA:3.40.50.10070 22 164 1.1E-36 T 29-03-2018 AM460_RS22635 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF04052 TolB amino-terminal domain 23 121 6.0E-31 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM460_RS15620 dabcf7fa2213e7eb9409a93d0890a8e5 247 SUPERFAMILY SSF53335 20 242 1.09E-39 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS15620 dabcf7fa2213e7eb9409a93d0890a8e5 247 Gene3D G3DSA:3.40.50.150 18 247 7.2E-42 T 29-03-2018 AM460_RS15620 dabcf7fa2213e7eb9409a93d0890a8e5 247 Pfam PF13649 Methyltransferase domain 60 158 2.7E-14 T 29-03-2018 AM460_RS15620 dabcf7fa2213e7eb9409a93d0890a8e5 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 4.8E-137 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM460_RS15620 dabcf7fa2213e7eb9409a93d0890a8e5 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.968 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM460_RS15620 dabcf7fa2213e7eb9409a93d0890a8e5 247 PIRSF PIRSF006325 1 243 1.4E-135 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM460_RS01875 215d629d08578afa7c3679e091d4fd50 334 SUPERFAMILY SSF117892 196 233 1.31E-7 T 29-03-2018 IPR001107 Band 7 domain AM460_RS01875 215d629d08578afa7c3679e091d4fd50 334 SUPERFAMILY SSF117892 56 157 1.06E-16 T 29-03-2018 IPR001107 Band 7 domain AM460_RS01875 215d629d08578afa7c3679e091d4fd50 334 PIRSF PIRSF005651 1 334 1.2E-110 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM460_RS01875 215d629d08578afa7c3679e091d4fd50 334 SMART SM00244 18 227 1.5E-47 T 29-03-2018 IPR001107 Band 7 domain AM460_RS01875 215d629d08578afa7c3679e091d4fd50 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 1.5E-34 T 29-03-2018 IPR001107 Band 7 domain AM460_RS01875 215d629d08578afa7c3679e091d4fd50 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 8.0E-150 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 SUPERFAMILY SSF53187 305 381 7.11E-59 T 29-03-2018 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 SUPERFAMILY SSF53187 5 180 7.11E-59 T 29-03-2018 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 1.8E-171 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 Gene3D G3DSA:3.40.630.10 1 182 3.0E-29 T 29-03-2018 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 Pfam PF07687 Peptidase dimerisation domain 178 288 1.4E-24 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 5.8E-33 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 Gene3D G3DSA:3.30.70.360 183 299 5.4E-21 T 29-03-2018 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 67.727 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 SUPERFAMILY SSF55031 181 295 5.38E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM460_RS03285 06887cda2e350a7985d1b1279817987d 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Gene3D G3DSA:3.10.25.10 210 314 1.2E-33 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 SUPERFAMILY SSF50486 208 309 3.3E-37 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Gene3D G3DSA:3.40.50.170 2 209 9.6E-70 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Pfam PF00551 Formyl transferase 6 183 2.4E-55 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 5.3E-32 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 SUPERFAMILY SSF53328 5 207 7.33E-68 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 3.9E-125 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM460_RS06985 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.596 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM460_RS18170 20455f9b618258c600dbeabe692e9020 457 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 452 3.3E-112 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM460_RS18170 20455f9b618258c600dbeabe692e9020 457 Gene3D G3DSA:1.20.1600.10 17 456 4.5E-95 T 29-03-2018 AM460_RS18170 20455f9b618258c600dbeabe692e9020 457 SUPERFAMILY SSF56954 3 453 6.15E-104 T 29-03-2018 AM460_RS18170 20455f9b618258c600dbeabe692e9020 457 Pfam PF02321 Outer membrane efflux protein 57 240 4.3E-25 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS18170 20455f9b618258c600dbeabe692e9020 457 Pfam PF02321 Outer membrane efflux protein 272 435 4.4E-29 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS13220 53074a6ac755f949326455551103e352 461 SUPERFAMILY SSF52540 145 388 9.87E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13220 53074a6ac755f949326455551103e352 461 Gene3D G3DSA:3.40.50.300 130 317 4.7E-27 T 29-03-2018 AM460_RS13220 53074a6ac755f949326455551103e352 461 Pfam PF00072 Response regulator receiver domain 7 115 2.0E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13220 53074a6ac755f949326455551103e352 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS13220 53074a6ac755f949326455551103e352 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS13220 53074a6ac755f949326455551103e352 461 SUPERFAMILY SSF46689 358 457 1.43E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS13220 53074a6ac755f949326455551103e352 461 Gene3D G3DSA:1.10.8.60 318 388 7.8E-25 T 29-03-2018 AM460_RS13220 53074a6ac755f949326455551103e352 461 SMART SM00382 165 308 5.1E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13220 53074a6ac755f949326455551103e352 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS13220 53074a6ac755f949326455551103e352 461 SMART SM00448 5 116 4.1E-42 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13220 53074a6ac755f949326455551103e352 461 Pfam PF00158 Sigma-54 interaction domain 146 311 4.2E-73 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS13220 53074a6ac755f949326455551103e352 461 Gene3D G3DSA:1.10.10.60 389 461 5.3E-19 T 29-03-2018 AM460_RS13220 53074a6ac755f949326455551103e352 461 SUPERFAMILY SSF52172 6 190 7.68E-50 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS13220 53074a6ac755f949326455551103e352 461 Pfam PF02954 Bacterial regulatory protein, Fis family 415 454 4.8E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS13220 53074a6ac755f949326455551103e352 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 1.4E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS13220 53074a6ac755f949326455551103e352 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 1.4E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS13220 53074a6ac755f949326455551103e352 461 Gene3D G3DSA:3.40.50.2300 4 129 4.4E-43 T 29-03-2018 AM460_RS17795 5a99e780f76f21ad54aa7930fb7e67c4 479 Pfam PF00171 Aldehyde dehydrogenase family 22 475 3.9E-166 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS17795 5a99e780f76f21ad54aa7930fb7e67c4 479 SUPERFAMILY SSF53720 4 477 1.19E-159 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS17795 5a99e780f76f21ad54aa7930fb7e67c4 479 Gene3D G3DSA:3.40.605.10 1 265 5.2E-92 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS17795 5a99e780f76f21ad54aa7930fb7e67c4 479 Gene3D G3DSA:3.40.309.10 266 445 6.3E-68 T 29-03-2018 AM460_RS17795 5a99e780f76f21ad54aa7930fb7e67c4 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM460_RS17795 5a99e780f76f21ad54aa7930fb7e67c4 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM460_RS07835 399b400466bc827e24b1af10ccffafc0 381 PIRSF PIRSF006078 1 377 3.9E-141 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS07835 399b400466bc827e24b1af10ccffafc0 381 Gene3D G3DSA:3.90.1510.10 42 276 6.1E-97 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM460_RS07835 399b400466bc827e24b1af10ccffafc0 381 SUPERFAMILY SSF110738 1 375 7.85E-142 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS07835 399b400466bc827e24b1af10ccffafc0 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.5E-174 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS07835 399b400466bc827e24b1af10ccffafc0 381 Pfam PF02595 Glycerate kinase family 3 373 9.7E-150 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 SMART SM00829 11 349 6.7E-7 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 6.3E-29 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 Pfam PF00107 Zinc-binding dehydrogenase 185 312 2.1E-25 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 SUPERFAMILY SSF50129 322 350 5.48E-43 T 29-03-2018 IPR011032 GroES-like AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 SUPERFAMILY SSF50129 2 152 5.48E-43 T 29-03-2018 IPR011032 GroES-like AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 SUPERFAMILY SSF51735 148 307 3.47E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 Gene3D G3DSA:3.90.180.10 4 169 3.6E-40 T 29-03-2018 AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 Gene3D G3DSA:3.90.180.10 300 351 0.14 T 29-03-2018 AM460_RS11685 664aea0136ed3b684ce730124e65f055 353 Gene3D G3DSA:3.40.50.10730 170 296 4.2E-26 T 29-03-2018 AM460_RS16825 3569d741710d2f822d32fe44cb0b27c2 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 2.1E-19 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 663 4.3E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SUPERFAMILY SSF52172 680 806 5.55E-24 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 PIRSF PIRSF036437 801 910 5.0E-30 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 PIRSF PIRSF036437 1 807 0.0 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Gene3D G3DSA:1.10.287.130 433 503 5.7E-18 T 29-03-2018 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Gene3D G3DSA:3.30.565.10 514 667 1.4E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 5 805 1.2E-271 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SMART SM00304 354 407 6.4E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Pfam PF00512 His Kinase A (phospho-acceptor) domain 443 508 1.3E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SUPERFAMILY SSF47226 804 906 3.01E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Gene3D G3DSA:1.20.120.160 806 908 1.8E-12 T 29-03-2018 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SMART SM00448 682 794 2.3E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SMART SM00388 443 508 4.0E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Gene3D G3DSA:3.40.50.2300 668 805 2.7E-25 T 29-03-2018 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SMART SM00073 818 906 1.7E-16 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Pfam PF01627 Hpt domain 827 905 1.4E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SUPERFAMILY SSF47384 426 508 6.67E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SMART SM00387 557 664 5.9E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Pfam PF00072 Response regulator receiver domain 685 792 9.6E-15 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 SUPERFAMILY SSF55874 497 662 2.1E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 Gene3D G3DSA:3.30.565.10 164 283 0.097 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 6.3E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 6.3E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 6.3E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS20595 11558ccc5eec589eb5dc8c299a57b716 910 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 6.3E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 Gene3D G3DSA:3.40.50.720 370 478 1.9E-20 T 29-03-2018 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 Gene3D G3DSA:3.50.50.60 627 671 0.059 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 7.9E-12 T 29-03-2018 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 7.9E-12 T 29-03-2018 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 7.9E-12 T 29-03-2018 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 SUPERFAMILY SSF51905 467 627 1.97E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 Gene3D G3DSA:3.20.20.70 2 369 2.4E-110 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 Gene3D G3DSA:3.50.50.60 479 625 9.5E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 398 3.9E-6 T 29-03-2018 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 619 633 3.9E-6 T 29-03-2018 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 635 1.3E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 1.5E-105 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 SUPERFAMILY SSF51971 333 519 6.24E-42 T 29-03-2018 AM460_RS08045 fcbcdf04c17c9b4e10db7eb5aca47216 672 SUPERFAMILY SSF51395 1 362 1.35E-109 T 29-03-2018 AM460_RS04855 26997719a607916636f72d131b78eed2 439 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 4.9E-153 T 29-03-2018 AM460_RS04855 26997719a607916636f72d131b78eed2 439 Gene3D G3DSA:1.20.1250.20 237 439 1.7E-26 T 29-03-2018 AM460_RS04855 26997719a607916636f72d131b78eed2 439 Pfam PF07690 Major Facilitator Superfamily 35 396 5.4E-49 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS04855 26997719a607916636f72d131b78eed2 439 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM460_RS04855 26997719a607916636f72d131b78eed2 439 SUPERFAMILY SSF103473 16 432 1.83E-77 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04855 26997719a607916636f72d131b78eed2 439 PIRSF PIRSF002808 6 439 3.2E-157 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS04855 26997719a607916636f72d131b78eed2 439 Gene3D G3DSA:1.20.1250.20 19 216 6.5E-32 T 29-03-2018 AM460_RS03345 feed412f075a941c15d28cda4bc76563 205 PIRSF PIRSF011444 1 205 1.1E-96 T 29-03-2018 IPR009706 Protein of unknown function DUF1287 AM460_RS03345 feed412f075a941c15d28cda4bc76563 205 Gene3D G3DSA:3.90.1720.10 30 205 1.1E-6 T 29-03-2018 AM460_RS03345 feed412f075a941c15d28cda4bc76563 205 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 31 202 3.0E-99 T 29-03-2018 IPR009706 Protein of unknown function DUF1287 AM460_RS03345 feed412f075a941c15d28cda4bc76563 205 Pfam PF06940 Domain of unknown function (DUF1287) 41 202 1.9E-70 T 29-03-2018 IPR009706 Protein of unknown function DUF1287 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 439 1.3E-30 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 SUPERFAMILY SSF47203 291 442 7.25E-41 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 Gene3D G3DSA:1.20.140.10 276 446 1.0E-34 T 29-03-2018 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 Gene3D G3DSA:2.40.110.10 179 275 9.7E-23 T 29-03-2018 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 275 4.6E-18 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM460_RS01810 36ee6841650b3574df93f68b987eb352 541 SUPERFAMILY SSF56645 60 282 6.62E-35 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM460_RS16310 3bf3556f6b6fda332badb64e00df3f32 275 Gene3D G3DSA:3.40.50.620 2 274 2.5E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS16310 3bf3556f6b6fda332badb64e00df3f32 275 SUPERFAMILY SSF52402 3 273 8.1E-87 T 29-03-2018 AM460_RS16310 3bf3556f6b6fda332badb64e00df3f32 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.675 T 29-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AM460_RS16310 3bf3556f6b6fda332badb64e00df3f32 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 16 275 9.6E-88 T 29-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AM460_RS16310 3bf3556f6b6fda332badb64e00df3f32 275 Pfam PF02540 NAD synthase 23 265 3.7E-81 T 29-03-2018 IPR022310 NAD/GMP synthase AM460_RS26105 26e8d060b9bd3b9cc62242da77ea0fbb 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 6.4E-48 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS26105 26e8d060b9bd3b9cc62242da77ea0fbb 231 SUPERFAMILY SSF53639 1 223 1.0E-71 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS26105 26e8d060b9bd3b9cc62242da77ea0fbb 231 SMART SM01007 7 198 1.0E-70 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS26105 26e8d060b9bd3b9cc62242da77ea0fbb 231 Gene3D G3DSA:3.40.225.10 1 231 3.0E-60 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS26105 26e8d060b9bd3b9cc62242da77ea0fbb 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 4.6E-134 T 29-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM460_RS26105 26e8d060b9bd3b9cc62242da77ea0fbb 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 77.21 T 29-03-2018 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD GO:0008742|GO:0019569 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM460_RS09900 a29085f75216287a33592686302d0637 230 SUPERFAMILY SSF53681 1 114 2.62E-36 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS09900 a29085f75216287a33592686302d0637 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS09900 a29085f75216287a33592686302d0637 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS09900 a29085f75216287a33592686302d0637 230 SUPERFAMILY SSF53681 119 229 4.91E-31 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS09900 a29085f75216287a33592686302d0637 230 Gene3D G3DSA:3.40.50.1860 118 215 1.3E-22 T 29-03-2018 AM460_RS09900 a29085f75216287a33592686302d0637 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 3.9E-56 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS09900 a29085f75216287a33592686302d0637 230 Gene3D G3DSA:3.40.50.1860 1 117 3.7E-30 T 29-03-2018 AM460_RS09900 a29085f75216287a33592686302d0637 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 8.1E-62 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 2.8E-15 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 3 154 2.4E-48 T 29-03-2018 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 8.6E-33 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 6.2E-21 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 8.2E-15 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 8.2E-15 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 8.2E-15 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 2 181 1.41E-48 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 268 373 9.1E-30 T 29-03-2018 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.30.310.50 374 445 1.9E-17 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 3.1E-45 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF55957 357 444 1.44E-21 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.805 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 156 256 3.49E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 258 365 2.28E-31 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 155 267 2.0E-33 T 29-03-2018 AM460_RS07570 4f8341aabbec408d6262598eee5cb3ed 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.1E-197 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS25880 389a5dad656b70da31de26225cbe2bab 65 SUPERFAMILY SSF57716 2 62 2.14E-23 T 29-03-2018 AM460_RS25880 389a5dad656b70da31de26225cbe2bab 65 Gene3D G3DSA:3.30.50.10 2 60 6.1E-29 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AM460_RS25880 389a5dad656b70da31de26225cbe2bab 65 Pfam PF03884 DNA gyrase inhibitor YacG 7 55 6.0E-25 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM460_RS25880 389a5dad656b70da31de26225cbe2bab 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.691 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Gene3D G3DSA:3.40.50.620 5 150 4.7E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 1.5E-48 T 29-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Gene3D G3DSA:1.10.730.10 374 537 9.6E-37 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 5.8E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.8E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.8E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 5.8E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.8E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 5.8E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.958 T 29-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 SUPERFAMILY SSF50249 570 676 1.64E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Gene3D G3DSA:2.40.50.140 567 677 1.6E-24 T 29-03-2018 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 SUPERFAMILY SSF47323 391 548 2.24E-47 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Gene3D G3DSA:3.40.50.620 249 372 4.8E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 3.5E-210 T 29-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 SUPERFAMILY SSF52374 176 388 6.37E-107 T 29-03-2018 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 SUPERFAMILY SSF52374 6 141 6.37E-107 T 29-03-2018 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Gene3D G3DSA:2.170.220.10 181 248 1.4E-15 T 29-03-2018 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 2.9E-165 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Pfam PF01588 Putative tRNA binding domain 581 674 5.0E-22 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 SUPERFAMILY SSF57770 142 176 1.15E-12 T 29-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS13810 68fe84c1d2754e5d8c1f4d7a66fe0a75 677 Gene3D G3DSA:2.20.28.20 151 175 2.0E-15 T 29-03-2018 AM460_RS10795 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM460_RS10795 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM460_RS10795 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM460_RS10795 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM460_RS10795 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM460_RS04555 3fb2549c0452e2100be49f3a0d2cffea 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 5.5E-127 T 29-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM460_RS04555 3fb2549c0452e2100be49f3a0d2cffea 346 PIRSF PIRSF002756 1 338 2.3E-105 T 29-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM460_RS04555 3fb2549c0452e2100be49f3a0d2cffea 346 Gene3D G3DSA:3.40.190.10 28 190 1.4E-33 T 29-03-2018 AM460_RS04555 3fb2549c0452e2100be49f3a0d2cffea 346 Gene3D G3DSA:3.40.190.10 196 346 3.6E-24 T 29-03-2018 AM460_RS04555 3fb2549c0452e2100be49f3a0d2cffea 346 Pfam PF12849 PBP superfamily domain 27 307 7.8E-63 T 29-03-2018 IPR024370 PBP domain AM460_RS04555 3fb2549c0452e2100be49f3a0d2cffea 346 SUPERFAMILY SSF53850 27 339 6.04E-98 T 29-03-2018 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 372 1.0E-85 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 SUPERFAMILY SSF51338 346 374 8.64E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 SUPERFAMILY SSF51338 2 49 8.64E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 SUPERFAMILY SSF51556 51 346 2.23E-94 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 PIRSF PIRSF038994 1 376 7.0E-114 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 Gene3D G3DSA:3.20.20.140 65 325 3.3E-95 T 29-03-2018 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 Gene3D G3DSA:2.30.40.10 326 375 0.0013 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 Gene3D G3DSA:2.30.40.10 1 64 4.2E-5 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS07765 9f3c85a73d60c815cad5dd46fffb40cc 377 Pfam PF01979 Amidohydrolase family 47 373 2.8E-16 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS09685 7029ae954fde2e197cb973c7ddc59dd8 219 Pfam PF03006 Haemolysin-III related 12 209 2.4E-37 T 29-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AM460_RS09685 7029ae954fde2e197cb973c7ddc59dd8 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 1.2E-72 T 29-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 SUPERFAMILY SSF52172 4 180 2.85E-43 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 Pfam PF00072 Response regulator receiver domain 9 117 4.8E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 SUPERFAMILY SSF52540 136 380 1.61E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 Gene3D G3DSA:3.40.50.2300 1 135 6.6E-34 T 29-03-2018 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 SMART SM00448 6 117 3.8E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 SMART SM00382 156 299 7.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 SUPERFAMILY SSF46689 387 437 1.67E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 Gene3D G3DSA:1.10.8.60 309 381 3.5E-22 T 29-03-2018 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 Gene3D G3DSA:3.40.50.300 136 308 1.9E-25 T 29-03-2018 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 Gene3D G3DSA:1.10.10.60 382 439 2.0E-7 T 29-03-2018 AM460_RS11640 dcaceae3f61ca375287ce590600f0fce 444 Pfam PF00158 Sigma-54 interaction domain 136 302 1.3E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS02760 77a2214441d4e8ddc38f8977d64de29c 69 SUPERFAMILY SSF69047 1 69 7.45E-28 T 29-03-2018 IPR008462 CsbD-like domain AM460_RS02760 77a2214441d4e8ddc38f8977d64de29c 69 PIRSF PIRSF039008 1 66 6.2E-32 T 29-03-2018 IPR026042 Stress response protein YjbJ AM460_RS02760 77a2214441d4e8ddc38f8977d64de29c 69 Pfam PF05532 CsbD-like 4 56 8.2E-22 T 29-03-2018 IPR008462 CsbD-like domain AM460_RS02760 77a2214441d4e8ddc38f8977d64de29c 69 Gene3D G3DSA:1.10.1470.10 1 69 3.4E-25 T 29-03-2018 IPR008462 CsbD-like domain AM460_RS07100 c94dda82d4f8e182378a634ff36e8365 385 Gene3D G3DSA:1.20.1600.10 44 304 2.2E-33 T 29-03-2018 AM460_RS07100 c94dda82d4f8e182378a634ff36e8365 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 155 359 2.6E-11 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS07100 c94dda82d4f8e182378a634ff36e8365 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 1.5E-86 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS07100 c94dda82d4f8e182378a634ff36e8365 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 292 1.3E-14 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS07100 c94dda82d4f8e182378a634ff36e8365 385 SUPERFAMILY SSF111369 52 299 3.4E-89 T 29-03-2018 AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:2.60.120.10 4 144 7.5E-34 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 SMART SM00100 2 122 7.6E-27 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF51206 8 136 1.07E-35 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:1.10.10.10 145 210 9.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 SMART SM00419 160 208 4.5E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS06615 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 SUPERFAMILY SSF51556 8 347 3.57E-149 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 Pfam PF01979 Amidohydrolase family 15 307 6.4E-22 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 1.5E-168 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 Gene3D G3DSA:3.20.20.140 14 347 9.2E-56 T 29-03-2018 AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 63.568 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS20255 7cdfa18757502397b427ce2c29882fff 347 PIRSF PIRSF001237 4 347 2.3E-141 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS01530 9718f16e2e82da45c9a8064a1edf0d72 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 24.052 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AM460_RS01530 9718f16e2e82da45c9a8064a1edf0d72 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 4.5E-55 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AM460_RS01530 9718f16e2e82da45c9a8064a1edf0d72 183 SUPERFAMILY SSF158710 37 179 3.4E-51 T 29-03-2018 IPR023153 PSPTO4464-like domain AM460_RS01530 9718f16e2e82da45c9a8064a1edf0d72 183 Gene3D G3DSA:1.10.60.30 108 183 9.0E-29 T 29-03-2018 AM460_RS01530 9718f16e2e82da45c9a8064a1edf0d72 183 Gene3D G3DSA:1.10.60.30 38 106 1.4E-22 T 29-03-2018 AM460_RS01530 9718f16e2e82da45c9a8064a1edf0d72 183 PIRSF PIRSF016183 10 183 8.0E-72 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AM460_RS23630 5d234355be32aad84fdad4ae11438496 745 SUPERFAMILY SSF160246 485 623 9.81E-26 T 29-03-2018 AM460_RS23630 5d234355be32aad84fdad4ae11438496 745 SUPERFAMILY SSF53448 71 401 1.01E-14 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS23630 5d234355be32aad84fdad4ae11438496 745 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 524 628 9.2E-18 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AM460_RS23630 5d234355be32aad84fdad4ae11438496 745 Gene3D G3DSA:3.90.550.10 35 367 8.0E-16 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS23630 5d234355be32aad84fdad4ae11438496 745 Pfam PF13632 Glycosyl transferase family group 2 165 382 5.8E-47 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 SUPERFAMILY SSF55120 10 246 7.48E-86 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 6.5E-22 T 29-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 Gene3D G3DSA:2.30.130.10 250 313 1.2E-15 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 SUPERFAMILY SSF88697 251 310 1.94E-14 T 29-03-2018 IPR015947 PUA-like domain AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.5E-19 T 29-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 Gene3D G3DSA:3.30.2350.10 10 230 4.4E-81 T 29-03-2018 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.967 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 2.5E-96 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS07625 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 1.3E-57 T 29-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AM460_RS12650 3a7e5ccb00f364bfafa5a4624f2e2dd6 882 Pfam PF13953 PapC C-terminal domain 771 825 1.4E-12 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS12650 3a7e5ccb00f364bfafa5a4624f2e2dd6 882 SUPERFAMILY SSF141729 33 154 2.09E-27 T 29-03-2018 AM460_RS12650 3a7e5ccb00f364bfafa5a4624f2e2dd6 882 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 321 331 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM460_RS12650 3a7e5ccb00f364bfafa5a4624f2e2dd6 882 Pfam PF13954 PapC N-terminal domain 34 180 2.0E-35 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS12650 3a7e5ccb00f364bfafa5a4624f2e2dd6 882 Pfam PF00577 Outer membrane usher protein 197 759 2.4E-196 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS20630 44f3f5361ef57c02cad29cd5736dc2db 436 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 319 335 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site AM460_RS20630 44f3f5361ef57c02cad29cd5736dc2db 436 SUPERFAMILY SSF53254 26 429 2.15E-81 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS20630 44f3f5361ef57c02cad29cd5736dc2db 436 Gene3D G3DSA:3.40.50.1240 21 433 4.5E-51 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS20630 44f3f5361ef57c02cad29cd5736dc2db 436 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 30 44 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site AM460_RS20630 44f3f5361ef57c02cad29cd5736dc2db 436 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 29 374 1.7E-33 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AM460_RS08680 667045d71daaaa8977845792025d6cc8 576 Gene3D G3DSA:3.40.50.980 187 356 3.3E-33 T 29-03-2018 AM460_RS08680 667045d71daaaa8977845792025d6cc8 576 Gene3D G3DSA:2.30.38.10 357 458 5.2E-17 T 29-03-2018 AM460_RS08680 667045d71daaaa8977845792025d6cc8 576 Gene3D G3DSA:3.30.300.30 459 562 1.2E-13 T 29-03-2018 AM460_RS08680 667045d71daaaa8977845792025d6cc8 576 SUPERFAMILY SSF56801 383 564 4.58E-96 T 29-03-2018 AM460_RS08680 667045d71daaaa8977845792025d6cc8 576 SUPERFAMILY SSF56801 22 354 4.58E-96 T 29-03-2018 AM460_RS08680 667045d71daaaa8977845792025d6cc8 576 Gene3D G3DSA:3.40.50.980 18 186 5.8E-30 T 29-03-2018 AM460_RS08680 667045d71daaaa8977845792025d6cc8 576 Pfam PF00501 AMP-binding enzyme 46 467 4.0E-75 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 29-03-2018 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:1.10.10.10 1 19 0.044 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 SUPERFAMILY SSF47413 3 60 2.13E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:3.40.50.2300 57 172 3.6E-18 T 29-03-2018 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.1E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:3.40.50.2300 173 294 2.0E-21 T 29-03-2018 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 SUPERFAMILY SSF53822 63 314 2.72E-60 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 1.8E-178 T 29-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 2.9E-19 T 29-03-2018 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:1.10.260.40 20 56 4.1E-21 T 29-03-2018 AM460_RS01495 e300e389c92535b2ab4d64bd780f0a09 315 SMART SM00354 4 74 5.3E-33 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS11230 2b5f1698665a2547eb72b1b93a51ffe5 247 SUPERFAMILY SSF102712 6 97 5.1E-16 T 29-03-2018 AM460_RS11230 2b5f1698665a2547eb72b1b93a51ffe5 247 Gene3D G3DSA:3.90.1720.10 107 228 2.2E-18 T 29-03-2018 AM460_RS11230 2b5f1698665a2547eb72b1b93a51ffe5 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 2.0E-13 T 29-03-2018 IPR028090 JAB domain, prokaryotic AM460_RS11230 2b5f1698665a2547eb72b1b93a51ffe5 247 Pfam PF00877 NlpC/P60 family 111 223 2.8E-13 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM460_RS11230 2b5f1698665a2547eb72b1b93a51ffe5 247 SUPERFAMILY SSF54001 101 226 1.37E-16 T 29-03-2018 AM460_RS11230 2b5f1698665a2547eb72b1b93a51ffe5 247 Gene3D G3DSA:3.40.140.10 2 106 4.8E-13 T 29-03-2018 AM460_RS11230 2b5f1698665a2547eb72b1b93a51ffe5 247 SMART SM00232 1 119 0.0097 T 29-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 SUPERFAMILY SSF53383 130 561 4.78E-106 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.40.640.10 130 424 2.1E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 PIRSF PIRSF009393 1 712 3.0E-287 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 4.6E-29 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.90.1150.10 425 594 8.0E-57 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 5.8E-46 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 5.5E-199 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 SUPERFAMILY SSF55904 567 708 5.75E-45 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS02115 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.90.100.10 595 715 1.4E-38 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS09680 200b6a6297fbd94fdd67021c2a1a87cf 103 Pfam PF04266 ASCH domain 6 101 7.2E-16 T 29-03-2018 IPR007374 ASCH domain AM460_RS09680 200b6a6297fbd94fdd67021c2a1a87cf 103 PIRSF PIRSF029143 1 103 3.2E-51 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 AM460_RS09680 200b6a6297fbd94fdd67021c2a1a87cf 103 Gene3D G3DSA:2.30.130.30 1 103 5.3E-22 T 29-03-2018 AM460_RS09680 200b6a6297fbd94fdd67021c2a1a87cf 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 32.098 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 AM460_RS09680 200b6a6297fbd94fdd67021c2a1a87cf 103 SUPERFAMILY SSF88697 1 102 6.34E-34 T 29-03-2018 IPR015947 PUA-like domain AM460_RS09680 200b6a6297fbd94fdd67021c2a1a87cf 103 SMART SM01022 6 102 4.4E-27 T 29-03-2018 IPR007374 ASCH domain AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 SUPERFAMILY SSF109604 307 493 1.73E-46 T 29-03-2018 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 PIRSF PIRSF001267 1 494 1.2E-187 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 Gene3D G3DSA:3.30.420.150 121 299 3.1E-35 T 29-03-2018 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 SUPERFAMILY SSF53067 7 128 5.18E-37 T 29-03-2018 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 55.224 T 29-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 SUPERFAMILY SSF53067 132 300 3.02E-41 T 29-03-2018 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 Gene3D G3DSA:1.10.3210.10 323 484 9.3E-4 T 29-03-2018 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 Gene3D G3DSA:3.30.420.40 1 120 1.1E-39 T 29-03-2018 AM460_RS04305 751bbc5a7e060095bbd2ab5805b76fbd 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 6.5E-103 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM460_RS10580 5694d89be54f41c528dccd398af1552e 420 Pfam PF07005 Putative sugar-binding N-terminal domain 4 227 8.8E-69 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM460_RS10580 5694d89be54f41c528dccd398af1552e 420 Gene3D G3DSA:3.40.50.10840 3 237 3.9E-76 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM460_RS10580 5694d89be54f41c528dccd398af1552e 420 SUPERFAMILY SSF142764 4 418 2.48E-130 T 29-03-2018 AM460_RS10580 5694d89be54f41c528dccd398af1552e 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 253 411 1.9E-40 T 29-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 PRINTS PR00446 Hydrogen uptake protein signature 56 66 5.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 PRINTS PR00446 Hydrogen uptake protein signature 3 15 5.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 PRINTS PR00446 Hydrogen uptake protein signature 67 83 5.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 PRINTS PR00446 Hydrogen uptake protein signature 15 26 5.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 PRINTS PR00446 Hydrogen uptake protein signature 33 50 5.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 Gene3D G3DSA:3.40.50.1450 3 155 1.2E-33 T 29-03-2018 IPR023430 Peptidase HybD-like domain AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 7.3E-35 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 Pfam PF01750 Hydrogenase maturation protease 23 140 3.9E-29 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 147 7.5E-69 T 29-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 AM460_RS10685 b8741da5c4f879e9235fd8f17d5f5abd 155 SUPERFAMILY SSF53163 4 152 1.02E-34 T 29-03-2018 IPR023430 Peptidase HybD-like domain AM460_RS00305 68ca86fc45f4356f5748ce297e094f9b 173 Pfam PF04985 Phage tail tube protein FII 7 172 1.8E-53 T 29-03-2018 IPR006498 Tail tube protein AM460_RS00305 68ca86fc45f4356f5748ce297e094f9b 173 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 173 5.8E-77 T 29-03-2018 IPR006498 Tail tube protein AM460_RS21175 68ca86fc45f4356f5748ce297e094f9b 173 Pfam PF04985 Phage tail tube protein FII 7 172 1.8E-53 T 29-03-2018 IPR006498 Tail tube protein AM460_RS21175 68ca86fc45f4356f5748ce297e094f9b 173 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 173 5.8E-77 T 29-03-2018 IPR006498 Tail tube protein AM460_RS08205 50637cfc8fc88597df93edd24487b84a 206 SUPERFAMILY SSF58010 86 162 9.22E-5 T 29-03-2018 AM460_RS08205 50637cfc8fc88597df93edd24487b84a 206 Pfam PF08239 Bacterial SH3 domain 35 85 5.6E-9 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AM460_RS08205 50637cfc8fc88597df93edd24487b84a 206 SMART SM00287 23 89 8.2E-16 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AM460_RS08205 50637cfc8fc88597df93edd24487b84a 206 PIRSF PIRSF006158 1 205 3.6E-73 T 29-03-2018 IPR016476 SH3 domain protein AM460_RS08205 50637cfc8fc88597df93edd24487b84a 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 2.3E-53 T 29-03-2018 IPR016476 SH3 domain protein AM460_RS08205 50637cfc8fc88597df93edd24487b84a 206 Gene3D G3DSA:2.30.30.410 13 96 9.8E-11 T 29-03-2018 AM460_RS08205 50637cfc8fc88597df93edd24487b84a 206 Gene3D G3DSA:1.20.5.50 97 171 1.5E-6 T 29-03-2018 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 ProSitePatterns PS00835 Aspartyl proteases, omptin family signature 2. 152 168 - T 29-03-2018 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 115 124 - T 29-03-2018 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PIRSF PIRSF001522 1 317 2.9E-139 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 Gene3D G3DSA:2.40.128.90 19 317 1.8E-58 T 29-03-2018 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 56 81 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 82 107 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 115 142 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 240 260 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 36 50 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 261 281 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 212 233 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 143 170 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 PRINTS PR00482 Omptin serine protease signature 190 211 2.1E-116 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 SUPERFAMILY SSF69917 23 317 8.11E-118 T 29-03-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 AM460_RS23645 d44f2f83cdd548588282bb786a41feec 317 Pfam PF01278 Omptin family 28 317 2.3E-122 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 Gene3D G3DSA:1.10.287.990 52 89 4.4E-9 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 SUPERFAMILY SSF55424 324 437 1.89E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 Gene3D G3DSA:3.50.50.60 244 341 4.5E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 Gene3D G3DSA:3.50.50.60 102 235 1.5E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 Gene3D G3DSA:3.30.390.30 342 440 1.4E-31 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 431 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 132 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 324 345 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.1E-49 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 434 4.9E-29 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 Gene3D G3DSA:3.40.50.720 2 51 3.5E-4 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PIRSF PIRSF000350 1 438 8.2E-94 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 SUPERFAMILY SSF51905 1 297 4.83E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 297 5.2E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 120 138 2.0E-27 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.0E-27 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 2.0E-27 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 2.0E-27 T 29-03-2018 AM460_RS24850 d119e45a023b2374ddad4dcb8493c5aa 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 2.0E-27 T 29-03-2018 AM460_RS00580 66319064d61836b210e41c9ee90775ca 241 SUPERFAMILY SSF46894 145 209 4.08E-12 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS00580 66319064d61836b210e41c9ee90775ca 241 SMART SM00421 151 208 3.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS00580 66319064d61836b210e41c9ee90775ca 241 Gene3D G3DSA:1.10.10.10 40 216 8.9E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00580 66319064d61836b210e41c9ee90775ca 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 6.0E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 5.5E-25 T 29-03-2018 IPR003711 CarD-like/TRCF domain AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 8.6E-18 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SUPERFAMILY SSF52540 520 780 1.27E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SUPERFAMILY SSF52540 10 343 2.21E-100 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Pfam PF03461 TRCF domain 1006 1098 2.8E-28 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SUPERFAMILY SSF52540 351 463 1.09E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Gene3D G3DSA:3.40.50.300 332 785 1.3E-42 T 29-03-2018 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SUPERFAMILY SSF143517 992 1144 1.57E-44 T 29-03-2018 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SUPERFAMILY SSF52540 779 987 2.95E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SMART SM00490 823 907 1.6E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SMART SM00487 597 787 4.7E-36 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.93 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SMART SM00982 1005 1105 1.9E-49 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Gene3D G3DSA:3.40.50.300 786 953 8.6E-26 T 29-03-2018 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Gene3D G3DSA:3.30.2060.10 130 175 2.8E-5 T 29-03-2018 AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SUPERFAMILY SSF141259 467 545 1.57E-23 T 29-03-2018 IPR003711 CarD-like/TRCF domain AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 SMART SM01058 476 573 3.1E-50 T 29-03-2018 IPR003711 CarD-like/TRCF domain AM460_RS19990 700d65d7d4042c2b290cd045d992e2d1 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 6.9E-21 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 Gene3D G3DSA:3.40.50.970 1 193 6.0E-43 T 29-03-2018 AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 SUPERFAMILY SSF52518 369 547 6.07E-40 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 SUPERFAMILY SSF52518 7 184 8.1E-48 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 Gene3D G3DSA:3.40.50.970 349 561 3.2E-36 T 29-03-2018 AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 SUPERFAMILY SSF52467 195 353 9.0E-37 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 327 6.7E-32 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 402 540 1.5E-24 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 178 4.5E-47 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 Gene3D G3DSA:3.40.50.1220 194 346 1.8E-34 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS12470 3450f1724247925d5e3b85caae272dc0 564 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 6 559 0.0 T 29-03-2018 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696 AM460_RS11825 8fdfc5b772bb357d9e57c9710e060f7e 372 Pfam PF04551 GcpE protein 14 353 9.3E-132 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM460_RS11825 8fdfc5b772bb357d9e57c9710e060f7e 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.652 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM460_RS11825 8fdfc5b772bb357d9e57c9710e060f7e 372 SUPERFAMILY SSF51717 15 208 1.49E-10 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM460_RS11825 8fdfc5b772bb357d9e57c9710e060f7e 372 Gene3D G3DSA:3.20.20.120 19 176 3.3E-18 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS11825 8fdfc5b772bb357d9e57c9710e060f7e 372 PIRSF PIRSF004640 1 363 7.3E-149 T 29-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM460_RS11825 8fdfc5b772bb357d9e57c9710e060f7e 372 SUPERFAMILY SSF56014 265 350 9.81E-10 T 29-03-2018 AM460_RS11825 8fdfc5b772bb357d9e57c9710e060f7e 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 7.5E-126 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM460_RS20230 ac94abc757e5dae3a4688e684b5a9cdf 215 SUPERFAMILY SSF46785 2 84 1.68E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20230 ac94abc757e5dae3a4688e684b5a9cdf 215 Gene3D G3DSA:1.10.10.10 97 171 8.1E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20230 ac94abc757e5dae3a4688e684b5a9cdf 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 2.4E-63 T 29-03-2018 IPR007432 Protein of unknown function DUF480 AM460_RS20230 ac94abc757e5dae3a4688e684b5a9cdf 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 34.767 T 29-03-2018 IPR007432 Protein of unknown function DUF480 AM460_RS20230 ac94abc757e5dae3a4688e684b5a9cdf 215 SUPERFAMILY SSF46785 90 172 2.52E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20230 ac94abc757e5dae3a4688e684b5a9cdf 215 Gene3D G3DSA:1.10.10.10 2 87 9.8E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26100 4cb160688e448a418f6aa74d9d9f13ac 500 Pfam PF02610 L-arabinose isomerase 5 359 8.1E-180 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM460_RS26100 4cb160688e448a418f6aa74d9d9f13ac 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 0.0 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM460_RS26100 4cb160688e448a418f6aa74d9d9f13ac 500 SUPERFAMILY SSF53743 1 326 5.23E-126 T 29-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 AM460_RS26100 4cb160688e448a418f6aa74d9d9f13ac 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.997 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM460_RS26100 4cb160688e448a418f6aa74d9d9f13ac 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 8.0E-46 T 29-03-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 AM460_RS26100 4cb160688e448a418f6aa74d9d9f13ac 500 PIRSF PIRSF001478 1 500 7.6E-260 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM460_RS26100 4cb160688e448a418f6aa74d9d9f13ac 500 SUPERFAMILY SSF50443 329 497 2.51E-71 T 29-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AM460_RS14390 f3f4e3ec2113d35bbecfc99785ed16db 329 Gene3D G3DSA:3.40.50.1980 22 134 4.9E-13 T 29-03-2018 AM460_RS14390 f3f4e3ec2113d35bbecfc99785ed16db 329 Gene3D G3DSA:3.40.50.1980 135 309 2.1E-36 T 29-03-2018 AM460_RS14390 f3f4e3ec2113d35bbecfc99785ed16db 329 Pfam PF01497 Periplasmic binding protein 34 264 1.6E-22 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS14390 f3f4e3ec2113d35bbecfc99785ed16db 329 SUPERFAMILY SSF53807 28 327 7.06E-49 T 29-03-2018 AM460_RS25520 eecf6b755b9a9b4068715fd9ae59dc6f 207 Pfam PF03458 UPF0126 domain 92 163 6.1E-20 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AM460_RS25520 eecf6b755b9a9b4068715fd9ae59dc6f 207 Pfam PF03458 UPF0126 domain 4 78 3.5E-23 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AM460_RS08305 105c00dac47638b0f4794d430d009b67 222 Gene3D G3DSA:3.40.30.10 28 222 7.7E-30 T 29-03-2018 AM460_RS08305 105c00dac47638b0f4794d430d009b67 222 SUPERFAMILY SSF52833 28 220 2.24E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS08305 105c00dac47638b0f4794d430d009b67 222 Hamap MF_00932 Thiol:disulfide interchange protein DsbL [dsbL]. 1 222 67.768 T 29-03-2018 IPR028588 Thiol:disulfide interchange protein DsbL AM460_RS08305 105c00dac47638b0f4794d430d009b67 222 Pfam PF01323 DSBA-like thioredoxin domain 48 201 2.0E-11 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM460_RS08305 105c00dac47638b0f4794d430d009b67 222 PIRSF PIRSF001488 1 222 6.3E-28 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM460_RS23845 4f52cdecd6ba96f0da8386afa0a8d56d 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS23845 4f52cdecd6ba96f0da8386afa0a8d56d 228 Pfam PF00005 ABC transporter 27 174 1.1E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS23845 4f52cdecd6ba96f0da8386afa0a8d56d 228 SUPERFAMILY SSF52540 6 226 1.25E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23845 4f52cdecd6ba96f0da8386afa0a8d56d 228 Gene3D G3DSA:3.40.50.300 3 228 3.1E-63 T 29-03-2018 AM460_RS23845 4f52cdecd6ba96f0da8386afa0a8d56d 228 SMART SM00382 35 225 3.9E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 Gene3D G3DSA:3.30.470.20 98 242 9.8E-48 T 29-03-2018 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 260 284 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 Pfam PF08442 ATP-grasp domain 2 205 8.8E-63 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 Pfam PF00549 CoA-ligase 265 382 9.1E-24 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 388 3.5E-148 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 Gene3D G3DSA:3.40.50.261 243 388 7.4E-44 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 SUPERFAMILY SSF56059 1 241 1.01E-63 T 29-03-2018 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 389 40.042 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 SUPERFAMILY SSF52210 242 388 2.62E-53 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 PIRSF PIRSF001554 1 389 4.4E-146 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS02670 07577abca94d6bd51f69d7c5cc9b8891 389 Gene3D G3DSA:3.30.1490.20 22 97 9.6E-15 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS08560 f462ced71b96ba4ecec883716611ad36 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 6.4E-48 T 29-03-2018 IPR022574 Protein of unknown function DUF2623 AM460_RS08560 f462ced71b96ba4ecec883716611ad36 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 95 1.0E-51 T 29-03-2018 IPR022574 Protein of unknown function DUF2623 AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 SMART SM00257 97 142 4.4E-6 T 29-03-2018 IPR018392 LysM domain AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 2.4E-8 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 Gene3D G3DSA:3.10.350.10 91 145 1.9E-6 T 29-03-2018 AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 Gene3D G3DSA:2.70.70.10 280 438 5.8E-46 T 29-03-2018 AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 SUPERFAMILY SSF54106 96 139 9.42E-5 T 29-03-2018 IPR018392 LysM domain AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 SUPERFAMILY SSF51261 169 408 1.88E-69 T 29-03-2018 IPR011055 Duplicated hybrid motif AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 Pfam PF01476 LysM domain 98 141 4.8E-8 T 29-03-2018 IPR018392 LysM domain AM460_RS15700 f034c6fa46c408eb985fa737a4492ad8 440 Pfam PF01551 Peptidase family M23 313 407 4.6E-33 T 29-03-2018 IPR016047 Peptidase M23 AM460_RS27160 2adef9d5c0909c3553628e90a852328e 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 8 77 3.0E-36 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS27160 2adef9d5c0909c3553628e90a852328e 77 Gene3D G3DSA:3.30.160.130 9 77 1.4E-38 T 29-03-2018 AM460_RS27160 2adef9d5c0909c3553628e90a852328e 77 SUPERFAMILY SSF54786 14 77 3.92E-28 T 29-03-2018 AM460_RS27160 2adef9d5c0909c3553628e90a852328e 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 10 76 1.5E-33 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 5.3E-279 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 1.2E-5 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SUPERFAMILY SSF50249 318 400 8.74E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SMART SM00278 446 465 24.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SMART SM00278 480 499 0.59 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SMART SM00278 512 531 600.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SMART SM00278 544 563 38.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Gene3D G3DSA:1.10.150.20 432 505 1.1E-26 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Gene3D G3DSA:1.10.150.20 506 571 2.6E-27 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 4.3E-23 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 7.2E-36 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 4.3E-11 T 29-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SMART SM00532 3 448 6.5E-297 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 1.4E-142 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Gene3D G3DSA:1.10.287.610 1 67 1.1E-26 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Gene3D G3DSA:3.40.50.10190 572 671 6.7E-26 T 29-03-2018 IPR001357 BRCT domain AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SUPERFAMILY SSF52113 596 669 5.23E-19 T 29-03-2018 IPR001357 BRCT domain AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 5.2E-14 T 29-03-2018 IPR001357 BRCT domain AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Gene3D G3DSA:2.40.50.140 322 390 1.2E-34 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 PIRSF PIRSF001604 1 671 1.5E-257 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SMART SM00292 595 670 3.8E-14 T 29-03-2018 IPR001357 BRCT domain AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Gene3D G3DSA:3.30.470.30 119 242 4.4E-53 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SUPERFAMILY SSF56091 2 316 4.46E-124 T 29-03-2018 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.998 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 SUPERFAMILY SSF47781 403 583 7.04E-62 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS12270 ae13d427ef356d3e2c000701f8f3608f 671 Gene3D G3DSA:3.30.1490.70 243 321 2.7E-24 T 29-03-2018 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:1.10.8.60 360 462 1.0E-19 T 29-03-2018 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 SMART SM00382 207 350 1.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 503 61.617 T 29-03-2018 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 SUPERFAMILY SSF52540 187 421 2.57E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:3.40.50.300 182 359 1.4E-27 T 29-03-2018 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 SUPERFAMILY SSF46689 451 502 6.72E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 SUPERFAMILY SSF55781 22 170 1.37E-17 T 29-03-2018 IPR029016 GAF domain-like AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 Pfam PF00158 Sigma-54 interaction domain 187 353 4.9E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:1.10.10.60 463 504 2.0E-9 T 29-03-2018 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:3.30.450.40 5 172 8.3E-18 T 29-03-2018 IPR029016 GAF domain-like AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 SMART SM00065 20 167 1.3E-20 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 Pfam PF01590 GAF domain 23 154 1.6E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS10725 3abb6f3add89001f533f792e2684c2cb 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 Pfam PF00206 Lyase 14 312 1.2E-85 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 Gene3D G3DSA:1.10.275.10 1 117 2.1E-43 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 Gene3D G3DSA:1.20.200.10 118 390 4.3E-83 T 29-03-2018 AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 SUPERFAMILY SSF48557 10 454 1.88E-106 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.4E-158 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 9.7E-53 T 29-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 Gene3D G3DSA:1.10.40.30 391 445 2.6E-32 T 29-03-2018 AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS19900 f3f8c25ca547ae03165e87bb47622ae0 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 2.2E-74 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF54768 109 223 2.04E-27 T 29-03-2018 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00535 21 149 9.5E-60 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.49 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:1.10.1520.10 5 148 1.7E-44 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 1.0E-14 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00358 156 224 9.1E-24 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF14622 Ribonuclease-III-like 20 141 1.6E-33 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF69065 5 159 1.69E-50 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM460_RS11560 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:3.30.160.20 149 226 4.3E-21 T 29-03-2018 AM460_RS23495 b78cce69e31a77d691994998f2875622 311 Pfam PF02780 Transketolase, C-terminal domain 181 303 3.5E-26 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM460_RS23495 b78cce69e31a77d691994998f2875622 311 SMART SM00861 5 170 2.4E-27 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS23495 b78cce69e31a77d691994998f2875622 311 SUPERFAMILY SSF52518 6 179 4.65E-38 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS23495 b78cce69e31a77d691994998f2875622 311 SUPERFAMILY SSF52922 175 311 5.76E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS23495 b78cce69e31a77d691994998f2875622 311 Pfam PF02779 Transketolase, pyrimidine binding domain 11 168 1.6E-19 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS23495 b78cce69e31a77d691994998f2875622 311 Gene3D G3DSA:3.40.50.920 181 311 3.8E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS23495 b78cce69e31a77d691994998f2875622 311 Gene3D G3DSA:3.40.50.970 3 179 2.4E-29 T 29-03-2018 AM460_RS26740 f0549d8c06aa6f2f332ecfefae1fb1db 282 Pfam PF13708 Domain of unknown function (DUF4942) 90 275 5.8E-46 T 29-03-2018 IPR031339 Domain of unknown function DUF4942 AM460_RS08180 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF53850 94 299 7.24E-39 T 29-03-2018 AM460_RS08180 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 97 179 2.6E-8 T 29-03-2018 AM460_RS08180 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF46785 9 115 1.36E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08180 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:1.10.10.10 8 96 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08180 26e5504bd56f44056070309eab3e0513 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS08180 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 180 268 3.5E-26 T 29-03-2018 AM460_RS08180 26e5504bd56f44056070309eab3e0513 310 Pfam PF03466 LysR substrate binding domain 93 296 5.1E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.40.50.300 1 80 2.6E-8 T 29-03-2018 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 SUPERFAMILY SSF52540 3 301 3.54E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.10.20.30 263 362 4.2E-46 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.1E-178 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 SUPERFAMILY SSF81271 279 359 4.14E-36 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.4E-39 T 29-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 PIRSF PIRSF006641 1 363 9.2E-159 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 47.029 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.7E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS19075 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:1.10.150.300 110 200 3.2E-28 T 29-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 8.2E-13 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 SMART SM00487 1 185 2.4E-20 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 SMART SM00490 263 345 2.8E-10 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 SUPERFAMILY SSF57829 424 465 8.97E-7 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 SUPERFAMILY SSF52540 237 363 6.15E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 SUPERFAMILY SSF52540 50 169 6.15E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 Gene3D G3DSA:3.40.50.300 1 164 2.1E-29 T 29-03-2018 AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 9.9E-26 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM460_RS13410 791c98192bc4a24958bece70d0c2655b 586 Gene3D G3DSA:3.40.50.300 226 359 1.6E-17 T 29-03-2018 AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 SUPERFAMILY SSF52283 1 133 2.46E-28 T 29-03-2018 AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 Gene3D G3DSA:3.40.50.720 114 290 3.9E-55 T 29-03-2018 AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 1.9E-62 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 Gene3D G3DSA:3.40.50.720 1 113 2.6E-27 T 29-03-2018 AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.8E-30 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 76.024 T 29-03-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 AM460_RS05495 d99526b4ae881b88e0fcb8c936007bc5 324 SUPERFAMILY SSF51735 100 288 6.03E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS11535 0af6b62814deda50d18ea9fa4bf3cc2e 318 Pfam PF03888 MucB/RseB N-terminal domain 28 204 2.4E-61 T 29-03-2018 IPR033434 MucB/RseB, N-terminal AM460_RS11535 0af6b62814deda50d18ea9fa4bf3cc2e 318 Pfam PF17188 MucB/RseB C-terminal domain 217 313 2.4E-29 T 29-03-2018 IPR033436 MucB/RseB, C-terminal AM460_RS11535 0af6b62814deda50d18ea9fa4bf3cc2e 318 PIRSF PIRSF005427 1 318 1.8E-101 T 29-03-2018 IPR005588 MucB/RseB AM460_RS11535 0af6b62814deda50d18ea9fa4bf3cc2e 318 Gene3D G3DSA:2.50.20.10 19 232 2.9E-20 T 29-03-2018 AM460_RS23310 041498d6c17ebb7f90459b55a1775c93 510 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 43 508 1.8E-273 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM460_RS23310 041498d6c17ebb7f90459b55a1775c93 510 PIRSF PIRSF009451 1 510 1.8E-272 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM460_RS23310 041498d6c17ebb7f90459b55a1775c93 510 SUPERFAMILY SSF100950 35 238 1.85E-76 T 29-03-2018 AM460_RS23310 041498d6c17ebb7f90459b55a1775c93 510 SUPERFAMILY SSF100950 242 508 2.56E-59 T 29-03-2018 AM460_RS23310 041498d6c17ebb7f90459b55a1775c93 510 Gene3D G3DSA:3.40.1080.10 2 239 1.2E-48 T 29-03-2018 AM460_RS23310 041498d6c17ebb7f90459b55a1775c93 510 Gene3D G3DSA:3.40.1080.10 241 484 6.1E-36 T 29-03-2018 AM460_RS23310 041498d6c17ebb7f90459b55a1775c93 510 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 510 4.9E-246 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM460_RS07500 17762f76e0f81ac376f47293595200a3 84 SUPERFAMILY SSF82657 2 82 3.01E-28 T 29-03-2018 IPR002634 BolA protein AM460_RS07500 17762f76e0f81ac376f47293595200a3 84 PIRSF PIRSF003113 1 83 6.8E-21 T 29-03-2018 IPR002634 BolA protein AM460_RS07500 17762f76e0f81ac376f47293595200a3 84 Pfam PF01722 BolA-like protein 17 74 9.0E-14 T 29-03-2018 IPR002634 BolA protein AM460_RS07500 17762f76e0f81ac376f47293595200a3 84 Gene3D G3DSA:3.30.300.90 1 83 1.2E-24 T 29-03-2018 AM460_RS13895 5ec0531d7ce36b205d0fff43e75cb417 425 Gene3D G3DSA:1.20.1250.20 2 193 5.2E-15 T 29-03-2018 AM460_RS13895 5ec0531d7ce36b205d0fff43e75cb417 425 Pfam PF03825 Nucleoside H+ symporter 1 405 3.1E-185 T 29-03-2018 AM460_RS13895 5ec0531d7ce36b205d0fff43e75cb417 425 SUPERFAMILY SSF103473 6 404 3.53E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS13895 5ec0531d7ce36b205d0fff43e75cb417 425 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 4.8E-197 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AM460_RS13895 5ec0531d7ce36b205d0fff43e75cb417 425 Gene3D G3DSA:1.20.1250.20 200 408 4.4E-22 T 29-03-2018 AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 SUPERFAMILY SSF55874 467 583 1.7E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 SUPERFAMILY SSF158472 178 225 2.09E-5 T 29-03-2018 AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 129 1.7E-9 T 29-03-2018 IPR029095 NarX-like, N-terminal AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 497 583 3.4E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 Pfam PF00672 HAMP domain 177 224 4.9E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 Gene3D G3DSA:3.30.450.40 40 390 0.002 T 29-03-2018 IPR029016 GAF domain-like AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 Gene3D G3DSA:3.30.565.10 453 589 6.8E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 SMART SM00387 494 587 5.0E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 SMART SM00304 176 228 1.4E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 Pfam PF07730 Histidine kinase 390 453 2.5E-18 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM460_RS18965 639ef90dfd87a94e484d5b209c756e4d 598 PIRSF PIRSF003167 1 597 2.0E-195 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SMART SM00260 501 641 2.9E-46 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SUPERFAMILY SSF55052 160 224 1.96E-17 T 29-03-2018 IPR015162 CheY binding AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Gene3D G3DSA:3.30.565.10 327 515 7.0E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 6.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 6.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 463 6.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 6.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SMART SM01231 261 324 2.7E-21 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 508 2.4E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Gene3D G3DSA:2.40.50.180 525 594 3.0E-12 T 29-03-2018 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SUPERFAMILY SSF55874 327 507 1.83E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Pfam PF01627 Hpt domain 8 106 4.8E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Gene3D G3DSA:1.10.287.560 261 325 1.2E-19 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Gene3D G3DSA:3.30.70.400 159 224 6.3E-25 T 29-03-2018 IPR015162 CheY binding AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Pfam PF01584 CheW-like domain 514 640 4.1E-27 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 262 324 1.3E-17 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SUPERFAMILY SSF47226 5 126 2.59E-33 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SUPERFAMILY SSF47384 262 325 4.71E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Gene3D G3DSA:1.20.120.160 1 142 3.8E-36 T 29-03-2018 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Gene3D G3DSA:2.30.30.40 595 640 1.1E-21 T 29-03-2018 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 Pfam PF09078 CheY binding 161 223 4.8E-18 T 29-03-2018 IPR015162 CheY binding AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SMART SM00073 5 102 3.4E-35 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SUPERFAMILY SSF50341 508 640 1.96E-31 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM460_RS15530 4cc177602096d8be75535e83fb3600a4 654 SMART SM00387 369 509 6.1E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 Pfam PF00106 short chain dehydrogenase 11 203 1.8E-56 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 Gene3D G3DSA:3.40.50.720 3 44 2.2E-6 T 29-03-2018 AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 Gene3D G3DSA:3.40.50.720 45 253 4.1E-59 T 29-03-2018 AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 4.2E-138 T 29-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 SUPERFAMILY SSF51735 9 252 8.57E-77 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS09890 063e46f12a56c2cb6f355adeb1da251b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS15330 c583cc3a5867c873c12c14bd7dad0424 435 Pfam PF01343 Peptidase family S49 147 293 4.6E-37 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM460_RS15330 c583cc3a5867c873c12c14bd7dad0424 435 Gene3D G3DSA:3.90.226.10 70 414 1.3E-26 T 29-03-2018 AM460_RS15330 c583cc3a5867c873c12c14bd7dad0424 435 SUPERFAMILY SSF52096 73 194 8.84E-28 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS15330 c583cc3a5867c873c12c14bd7dad0424 435 SUPERFAMILY SSF52096 225 283 8.84E-28 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 6.3E-5 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 6.3E-5 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.3E-5 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 Gene3D G3DSA:3.50.50.60 1 200 5.4E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 Gene3D G3DSA:2.40.30.10 201 269 4.2E-23 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 SUPERFAMILY SSF160996 190 338 3.53E-43 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 Gene3D G3DSA:1.10.8.260 270 321 3.8E-14 T 29-03-2018 IPR023166 HI0933 insert-like domain AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 7.4E-7 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 7.4E-7 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.4E-7 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 SUPERFAMILY SSF51905 337 394 7.86E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 SUPERFAMILY SSF51905 3 188 7.86E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 Pfam PF03486 HI0933-like protein 5 392 3.7E-156 T 29-03-2018 AM460_RS05930 e236ed10cc435b496207a3b56cbab9c3 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 1.2E-128 T 29-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 201 251 4.8E-12 T 29-03-2018 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 43.067 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF01556 DnaJ C terminal domain 118 330 2.9E-46 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF57938 131 207 3.14E-24 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 29-03-2018 IPR018253 DnaJ domain, conserved site AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:1.10.287.110 1 115 2.7E-38 T 29-03-2018 IPR001623 DnaJ domain AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.1E-143 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 111 166 2.49E-20 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 210 256 2.49E-20 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.10.230.10 141 200 9.8E-22 T 29-03-2018 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 SMART SM00271 4 62 1.5E-31 T 29-03-2018 IPR001623 DnaJ domain AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-33 T 29-03-2018 IPR001623 DnaJ domain AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 42 62 1.0E-33 T 29-03-2018 IPR001623 DnaJ domain AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 62 81 1.0E-33 T 29-03-2018 IPR001623 DnaJ domain AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-33 T 29-03-2018 IPR001623 DnaJ domain AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 256 341 6.02E-21 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 252 362 2.5E-27 T 29-03-2018 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF00684 DnaJ central domain 144 204 4.0E-16 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF00226 DnaJ domain 5 67 8.6E-29 T 29-03-2018 IPR001623 DnaJ domain AM460_RS00035 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF46565 1 106 9.29E-37 T 29-03-2018 IPR001623 DnaJ domain AM460_RS12385 ce7477f1c88546bc57eb146c3ac5b6c1 321 Gene3D G3DSA:3.30.420.40 1 108 1.6E-15 T 29-03-2018 AM460_RS12385 ce7477f1c88546bc57eb146c3ac5b6c1 321 SUPERFAMILY SSF53067 4 318 2.68E-64 T 29-03-2018 AM460_RS12385 ce7477f1c88546bc57eb146c3ac5b6c1 321 Gene3D G3DSA:3.40.367.20 109 299 7.1E-30 T 29-03-2018 AM460_RS12385 ce7477f1c88546bc57eb146c3ac5b6c1 321 Hamap MF_00524 Glucokinase [glk]. 4 316 35.744 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM460_RS12385 ce7477f1c88546bc57eb146c3ac5b6c1 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 3.6E-156 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM460_RS12385 ce7477f1c88546bc57eb146c3ac5b6c1 321 Pfam PF02685 Glucokinase 6 315 1.8E-123 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Pfam PF00013 KH domain 556 614 3.7E-9 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Gene3D G3DSA:1.10.10.400 251 316 2.1E-20 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SUPERFAMILY SSF46915 226 325 1.15E-25 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.622 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 2.9E-14 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.7E-4 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SUPERFAMILY SSF55666 145 235 2.1E-31 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 PIRSF PIRSF005499 2 710 4.7E-302 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Gene3D G3DSA:3.30.230.70 13 250 7.8E-54 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 4.2E-26 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.4E-18 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 8.6E-21 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Pfam PF00575 S1 RNA binding domain 619 690 6.0E-23 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SUPERFAMILY SSF50249 609 693 9.42E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Gene3D G3DSA:3.30.230.70 317 544 3.9E-57 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Gene3D G3DSA:3.30.1370.10 554 616 1.3E-13 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SUPERFAMILY SSF54211 301 492 2.68E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SUPERFAMILY SSF55666 450 548 1.68E-27 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SMART SM00322 552 617 4.5E-12 T 29-03-2018 IPR004087 K Homology domain GO:0003676 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SUPERFAMILY SSF54791 554 622 2.88E-17 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 Gene3D G3DSA:2.40.50.140 617 698 2.1E-26 T 29-03-2018 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SMART SM00316 620 690 1.6E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS07635 0ab0e1c4d165704fa53618ca8d247ca8 711 SUPERFAMILY SSF54211 4 144 3.64E-50 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS26305 d0e8724971be0a5d56139c92b47feb7a 72 ProDom PD056390 YAAY CYTOPLASMIC STY0053 ECS0027 3 72 8.0E-33 T 29-03-2018 IPR020105 Uncharacterised protein family YaaY AM460_RS26305 d0e8724971be0a5d56139c92b47feb7a 72 Pfam PF10837 Protein of unknown function (DUF2575) 2 72 2.4E-46 T 29-03-2018 IPR020105 Uncharacterised protein family YaaY AM460_RS13065 af0c7dbba89895e58ad06a6ef873f1fb 200 SUPERFAMILY SSF53254 55 171 8.25E-16 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS13065 af0c7dbba89895e58ad06a6ef873f1fb 200 Gene3D G3DSA:3.40.50.1240 47 182 3.3E-14 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS13065 af0c7dbba89895e58ad06a6ef873f1fb 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 56 127 1.3E-5 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS13065 af0c7dbba89895e58ad06a6ef873f1fb 200 Hamap MF_01868 Lipopolysaccharide core heptose(II)-phosphate phosphatase [ais]. 1 200 62.702 T 29-03-2018 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 AM460_RS13065 af0c7dbba89895e58ad06a6ef873f1fb 200 PIRSF PIRSF011416 1 200 1.4E-88 T 29-03-2018 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 AM460_RS12790 89b62b588cf2c717df778e0ea11596ef 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM460_RS12790 89b62b588cf2c717df778e0ea11596ef 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 5.9E-63 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS12790 89b62b588cf2c717df778e0ea11596ef 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 3.9E-101 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM460_RS12790 89b62b588cf2c717df778e0ea11596ef 260 Gene3D G3DSA:3.40.190.10 140 258 7.8E-16 T 29-03-2018 AM460_RS12790 89b62b588cf2c717df778e0ea11596ef 260 SMART SM00062 27 256 9.2E-79 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS12790 89b62b588cf2c717df778e0ea11596ef 260 SUPERFAMILY SSF53850 26 257 1.02E-65 T 29-03-2018 AM460_RS12790 89b62b588cf2c717df778e0ea11596ef 260 Gene3D G3DSA:3.40.190.10 19 139 1.3E-35 T 29-03-2018 AM460_RS06205 6e5c840dbf791cfd79f4ff1222c7a038 175 Gene3D G3DSA:3.40.50.300 7 175 9.3E-27 T 29-03-2018 AM460_RS06205 6e5c840dbf791cfd79f4ff1222c7a038 175 SUPERFAMILY SSF52540 4 172 1.51E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06205 6e5c840dbf791cfd79f4ff1222c7a038 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 173 3.0E-72 T 29-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AM460_RS06205 6e5c840dbf791cfd79f4ff1222c7a038 175 Pfam PF01202 Shikimate kinase 17 171 8.1E-12 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS22405 96aaeda2e4331957aa280da4475fd18d 161 Pfam PF01967 MoaC family 15 150 4.3E-55 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM460_RS22405 96aaeda2e4331957aa280da4475fd18d 161 SUPERFAMILY SSF55040 11 155 4.84E-62 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM460_RS22405 96aaeda2e4331957aa280da4475fd18d 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.996 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AM460_RS22405 96aaeda2e4331957aa280da4475fd18d 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.5E-74 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AM460_RS22405 96aaeda2e4331957aa280da4475fd18d 161 Gene3D G3DSA:3.30.70.640 2 158 6.7E-69 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.749 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PIRSF PIRSF001336 17 658 1.1E-257 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:3.20.20.10 115 369 1.9E-33 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 1.2E-72 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 423 604 1.3E-62 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 22 114 1.6E-13 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 1.5E-280 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF50621 482 584 4.88E-7 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 1.7E-74 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM460_RS09450 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF51419 92 369 1.48E-67 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 PIRSF PIRSF001394 30 548 1.5E-238 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 7.5E-86 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 Pfam PF05683 Fumarase C-terminus 332 537 1.4E-94 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 Gene3D G3DSA:3.20.130.10 359 536 2.4E-68 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.0E-62 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 8.5E-31 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM460_RS17020 7c52014ab1d3ae3630d84e09d51c1877 548 SUPERFAMILY SSF117457 361 536 3.14E-62 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 Pfam PF00425 chorismate binding enzyme 190 443 1.4E-91 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 PRINTS PR00095 Anthranilate synthase component I signature 291 304 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 PRINTS PR00095 Anthranilate synthase component I signature 305 318 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 PRINTS PR00095 Anthranilate synthase component I signature 400 414 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 PRINTS PR00095 Anthranilate synthase component I signature 385 399 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 SUPERFAMILY SSF56322 4 452 2.75E-147 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 153 1.8E-28 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 Gene3D G3DSA:3.60.120.10 1 453 5.7E-156 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS15945 1eb3d44cbabe7df6736394640a997aba 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 446 4.0E-141 T 29-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AM460_RS22165 1b336c422a4f246c937d665ef61d628d 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 9.1E-99 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS22165 1b336c422a4f246c937d665ef61d628d 512 PIRSF PIRSF002741 24 511 1.3E-109 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS22165 1b336c422a4f246c937d665ef61d628d 512 Gene3D G3DSA:3.10.105.10 275 486 1.7E-59 T 29-03-2018 AM460_RS22165 1b336c422a4f246c937d665ef61d628d 512 Gene3D G3DSA:3.40.190.10 182 274 6.4E-28 T 29-03-2018 AM460_RS22165 1b336c422a4f246c937d665ef61d628d 512 Gene3D G3DSA:3.90.76.10 37 181 2.6E-42 T 29-03-2018 AM460_RS22165 1b336c422a4f246c937d665ef61d628d 512 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM460_RS22165 1b336c422a4f246c937d665ef61d628d 512 SUPERFAMILY SSF53850 29 510 9.87E-146 T 29-03-2018 AM460_RS15970 2c9d38858b4c58e13cce05e910645c3f 231 SUPERFAMILY SSF53067 108 217 1.55E-31 T 29-03-2018 AM460_RS15970 2c9d38858b4c58e13cce05e910645c3f 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 1.1E-68 T 29-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AM460_RS15970 2c9d38858b4c58e13cce05e910645c3f 231 Pfam PF00814 Glycoprotease family 28 131 1.1E-27 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS15970 2c9d38858b4c58e13cce05e910645c3f 231 Gene3D G3DSA:3.30.420.40 1 138 4.0E-39 T 29-03-2018 AM460_RS15970 2c9d38858b4c58e13cce05e910645c3f 231 SUPERFAMILY SSF53067 3 106 2.42E-30 T 29-03-2018 AM460_RS15970 2c9d38858b4c58e13cce05e910645c3f 231 Gene3D G3DSA:3.30.420.40 145 231 5.5E-4 T 29-03-2018 AM460_RS24340 91ce89c8c196f54ebdda1ef42dfb6aee 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.843 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM460_RS24340 91ce89c8c196f54ebdda1ef42dfb6aee 375 SUPERFAMILY SSF51713 1 364 9.94E-164 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM460_RS24340 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 369 5.8E-182 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM460_RS24340 91ce89c8c196f54ebdda1ef42dfb6aee 375 Gene3D G3DSA:3.20.20.105 1 369 1.1E-160 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM460_RS24340 91ce89c8c196f54ebdda1ef42dfb6aee 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.4E-93 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM460_RS24340 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 369 1.7E-192 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM460_RS18195 d610fc02c58887890afc22550fe93371 375 SUPERFAMILY SSF69118 256 373 1.73E-12 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM460_RS18195 d610fc02c58887890afc22550fe93371 375 Gene3D G3DSA:1.20.1290.10 23 186 0.22 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM460_RS18195 d610fc02c58887890afc22550fe93371 375 Gene3D G3DSA:1.20.1290.10 217 374 7.7E-12 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM460_RS18195 d610fc02c58887890afc22550fe93371 375 SUPERFAMILY SSF69118 76 187 2.85E-9 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM460_RS07020 98112c4cb5a2598d5329845428db20f1 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 1.5E-30 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 AM460_RS07020 98112c4cb5a2598d5329845428db20f1 85 SUPERFAMILY SSF160272 2 84 2.09E-31 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 AM460_RS07020 98112c4cb5a2598d5329845428db20f1 85 Gene3D G3DSA:3.30.160.140 5 83 2.5E-33 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 AM460_RS18590 73a57b8c368364ed2434383c254fc512 177 Pfam PF00959 Phage lysozyme 48 166 1.4E-28 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM460_RS18590 73a57b8c368364ed2434383c254fc512 177 Gene3D G3DSA:1.10.530.40 1 176 1.4E-43 T 29-03-2018 IPR023347 Lysozyme domain GO:0003796 AM460_RS18590 73a57b8c368364ed2434383c254fc512 177 SUPERFAMILY SSF53955 6 171 4.35E-34 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS16480 f0fd1ed0c3010941769a8997523380ab 249 Gene3D G3DSA:3.40.50.300 3 243 2.4E-43 T 29-03-2018 AM460_RS16480 f0fd1ed0c3010941769a8997523380ab 249 SUPERFAMILY SSF52540 14 223 1.21E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS16480 f0fd1ed0c3010941769a8997523380ab 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 248 46.138 T 29-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 AM460_RS16480 f0fd1ed0c3010941769a8997523380ab 249 Pfam PF00005 ABC transporter 18 162 2.0E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS16480 f0fd1ed0c3010941769a8997523380ab 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS16480 f0fd1ed0c3010941769a8997523380ab 249 SMART SM00382 25 210 9.7E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 SUPERFAMILY SSF53335 3 209 2.57E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 1.6E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 1.6E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 1.6E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 1.6E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 1.6E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 Pfam PF01555 DNA methylase 21 200 1.4E-30 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 Gene3D G3DSA:3.40.50.150 2 223 2.7E-40 T 29-03-2018 AM460_RS27240 a453819bd8d52cdd2461a136bdd27205 227 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS17050 9e07e1d7d2b77edf1468c81956910cbc 240 SUPERFAMILY SSF51735 9 239 2.65E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17050 9e07e1d7d2b77edf1468c81956910cbc 240 Gene3D G3DSA:3.40.50.720 8 240 5.4E-35 T 29-03-2018 AM460_RS17050 9e07e1d7d2b77edf1468c81956910cbc 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 238 1.0E-22 T 29-03-2018 AM460_RS17050 9e07e1d7d2b77edf1468c81956910cbc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17050 9e07e1d7d2b77edf1468c81956910cbc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.5E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17050 9e07e1d7d2b77edf1468c81956910cbc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.5E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17050 9e07e1d7d2b77edf1468c81956910cbc 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS04595 b23fd7ef61a07d941f92ac4949b1ca6b 538 Pfam PF02264 LamB porin 127 538 1.7E-83 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS04595 b23fd7ef61a07d941f92ac4949b1ca6b 538 SUPERFAMILY SSF56935 125 538 2.75E-98 T 29-03-2018 AM460_RS04595 b23fd7ef61a07d941f92ac4949b1ca6b 538 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 132 533 0.0 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS04595 b23fd7ef61a07d941f92ac4949b1ca6b 538 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 57 4.1E-15 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain AM460_RS04595 b23fd7ef61a07d941f92ac4949b1ca6b 538 Gene3D G3DSA:2.40.170.10 123 538 6.6E-94 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS19645 bc323561f30cdd3044602f5c4f72d792 192 PIRSF PIRSF004395 1 192 1.3E-97 T 29-03-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail AM460_RS19645 bc323561f30cdd3044602f5c4f72d792 192 Pfam PF06763 Prophage minor tail protein Z (GPZ) 3 192 3.3E-78 T 29-03-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail AM460_RS03485 e99bc3f41a0a7e11ca9c090beef70d1c 251 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 31 249 8.6E-93 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM460_RS03485 e99bc3f41a0a7e11ca9c090beef70d1c 251 PIRSF PIRSF001273 1 251 1.0E-112 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM460_RS03485 e99bc3f41a0a7e11ca9c090beef70d1c 251 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 251 57.65 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM460_RS03485 e99bc3f41a0a7e11ca9c090beef70d1c 251 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 251 8.4E-162 T 29-03-2018 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM460_RS03485 e99bc3f41a0a7e11ca9c090beef70d1c 251 SUPERFAMILY SSF54197 31 249 8.16E-92 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM460_RS03485 e99bc3f41a0a7e11ca9c090beef70d1c 251 Gene3D G3DSA:3.30.428.30 29 249 7.7E-94 T 29-03-2018 AM460_RS03095 6553ea7523b92f9134e222873b6bcf44 256 SUPERFAMILY SSF110399 1 235 1.1E-81 T 29-03-2018 AM460_RS03095 6553ea7523b92f9134e222873b6bcf44 256 Gene3D G3DSA:3.20.20.70 1 256 5.6E-52 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03095 6553ea7523b92f9134e222873b6bcf44 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.741 T 29-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM460_RS03095 6553ea7523b92f9134e222873b6bcf44 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.6E-110 T 29-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.4E-14 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.4E-14 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.4E-14 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF01726 LexA DNA binding domain 1 65 1.3E-31 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.817 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF00717 Peptidase S24-like 114 180 4.9E-16 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 3.2E-87 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF46785 3 70 6.28E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:1.10.10.10 1 70 2.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF51306 76 198 1.27E-38 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS02770 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:2.10.109.10 80 198 7.9E-27 T 29-03-2018 AM460_RS08185 6eef03657d134c52e9725ddeea8523f6 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 8.0E-83 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM460_RS08185 6eef03657d134c52e9725ddeea8523f6 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 6.7E-50 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM460_RS08185 6eef03657d134c52e9725ddeea8523f6 205 SMART SM01207 10 185 1.9E-86 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM460_RS08185 6eef03657d134c52e9725ddeea8523f6 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.447 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 SUPERFAMILY SSF52540 6 232 9.69E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 41.483 T 29-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 Gene3D G3DSA:3.40.50.300 17 281 8.6E-5 T 29-03-2018 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 Gene3D G3DSA:1.10.10.10 833 893 2.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 1.2E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 SUPERFAMILY SSF46894 828 892 1.6E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 SUPERFAMILY SSF48452 442 803 6.33E-155 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 Gene3D G3DSA:1.25.40.10 436 808 2.2E-47 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 1.2E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 1.2E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 1.2E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS06305 5d0e134e6e3f51f6ea122b180734fb7d 901 SMART SM00421 833 890 3.1E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.40.10 1298 1413 4.8E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 1088 1194 3.14E-17 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.40.10 1201 1297 1.8E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF11924 Inverse autotransporter, beta-domain 76 350 8.5E-114 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 990 1088 5.3E-19 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 890 986 1.1E-16 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF02369 Bacterial Ig-like domain (group 1) 999 1086 1.1E-11 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF02369 Bacterial Ig-like domain (group 1) 1199 1287 4.0E-11 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF02369 Bacterial Ig-like domain (group 1) 1097 1185 3.7E-13 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 684 780 8.11E-13 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF09134 Invasin, domain 3 579 680 4.5E-16 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF09134 Invasin, domain 3 684 783 2.1E-10 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF09134 Invasin, domain 3 789 885 8.5E-13 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF09134 Invasin, domain 3 893 980 5.4E-11 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Pfam PF09134 Invasin, domain 3 474 565 3.0E-12 T 29-03-2018 IPR015217 Invasin, domain 3 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 474 567 1.75E-10 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.40.1120 1132 1200 1.2E-4 T 29-03-2018 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 1199 1288 5.49E-16 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 786 880 5.23E-16 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 1296 1397 4.71E-5 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 PRINTS PR01369 Intimin signature 202 217 2.5E-14 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 PRINTS PR01369 Intimin signature 230 249 2.5E-14 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 PRINTS PR01369 Intimin signature 386 398 2.5E-14 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 PRINTS PR01369 Intimin signature 298 317 2.5E-14 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SMART SM00634 583 674 1.9E-20 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SMART SM00634 1097 1188 2.2E-24 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SMART SM00634 1199 1290 9.2E-25 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SMART SM00634 999 1087 1.1E-24 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 SUPERFAMILY SSF49373 579 663 1.41E-14 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.120.260 506 624 9.5E-14 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.120.260 366 505 1.7E-15 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.120.260 723 830 1.6E-14 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.120.260 625 722 6.9E-11 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.120.260 1043 1131 1.5E-18 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.120.260 933 1042 8.1E-17 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24880 9db484ea031bba40e5412ffd2e76a114 1415 Gene3D G3DSA:2.60.120.260 831 932 2.6E-15 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS19975 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 SMART SM00382 34 222 5.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS19975 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 2.2E-113 T 29-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 AM460_RS19975 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 Gene3D G3DSA:3.40.50.300 1 231 1.1E-67 T 29-03-2018 AM460_RS19975 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 SUPERFAMILY SSF52540 5 224 8.12E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19975 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS19975 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 Pfam PF00005 ABC transporter 25 173 1.1E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS12110 d525efcae241c5bd091cb4b2ab383951 467 Gene3D G3DSA:3.40.309.10 250 425 7.2E-27 T 29-03-2018 AM460_RS12110 d525efcae241c5bd091cb4b2ab383951 467 SUPERFAMILY SSF53720 34 458 1.09E-61 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS12110 d525efcae241c5bd091cb4b2ab383951 467 Gene3D G3DSA:3.40.605.10 15 249 2.4E-29 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS12110 d525efcae241c5bd091cb4b2ab383951 467 Pfam PF00171 Aldehyde dehydrogenase family 34 422 5.2E-30 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS12110 d525efcae241c5bd091cb4b2ab383951 467 PIRSF PIRSF036410 1 467 6.9E-212 T 29-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related AM460_RS02415 f15d3a4fcf8b4e0733d8c4445953269f 231 Gene3D G3DSA:3.20.20.70 1 218 4.6E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS02415 f15d3a4fcf8b4e0733d8c4445953269f 231 SUPERFAMILY SSF51366 1 214 4.66E-59 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS02415 f15d3a4fcf8b4e0733d8c4445953269f 231 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 196 1.4E-62 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS02415 f15d3a4fcf8b4e0733d8c4445953269f 231 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 29 43 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS02415 f15d3a4fcf8b4e0733d8c4445953269f 231 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 207 2.4E-65 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS02415 f15d3a4fcf8b4e0733d8c4445953269f 231 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS08430 6155675ea50d1b1ed0d8a26d31ede6e1 535 Gene3D G3DSA:3.10.105.10 306 504 1.2E-55 T 29-03-2018 AM460_RS08430 6155675ea50d1b1ed0d8a26d31ede6e1 535 PIRSF PIRSF002741 3 535 7.8E-104 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS08430 6155675ea50d1b1ed0d8a26d31ede6e1 535 SUPERFAMILY SSF53850 26 528 5.97E-133 T 29-03-2018 AM460_RS08430 6155675ea50d1b1ed0d8a26d31ede6e1 535 Gene3D G3DSA:3.40.190.10 170 305 2.7E-35 T 29-03-2018 AM460_RS08430 6155675ea50d1b1ed0d8a26d31ede6e1 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 453 2.9E-78 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS08430 6155675ea50d1b1ed0d8a26d31ede6e1 535 Gene3D G3DSA:3.90.76.10 57 169 1.1E-30 T 29-03-2018 AM460_RS08290 265d0972bd15046d7555cfda792abe62 257 Hamap MF_00548 Zinc transporter ZupT [zupT]. 1 252 30.594 T 29-03-2018 IPR023498 Zinc transporter ZupT AM460_RS08290 265d0972bd15046d7555cfda792abe62 257 Pfam PF02535 ZIP Zinc transporter 98 246 2.0E-25 T 29-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 Gene3D G3DSA:1.10.10.60 59 87 1.9E-13 T 29-03-2018 AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 Pfam PF13936 Helix-turn-helix domain 58 98 3.5E-18 T 29-03-2018 IPR025246 Transposase IS30-like HTH domain AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 Gene3D G3DSA:3.30.420.10 223 381 2.7E-21 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 Pfam PF00665 Integrase core domain 230 336 2.3E-14 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 SUPERFAMILY SSF53098 229 375 9.1E-26 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 Gene3D G3DSA:1.10.10.10 1 58 6.8E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 ProSitePatterns PS01043 Transposases, IS30 family, signature. 323 339 - T 29-03-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 AM460_RS09125 05951fefcc4e73fa9add027d5f8afe4c 383 Gene3D G3DSA:1.10.260.40 88 200 0.2 T 29-03-2018 AM460_RS06495 ad64cec4eb7f19a532f05cb4e3f501d8 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 7.7E-92 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS06495 ad64cec4eb7f19a532f05cb4e3f501d8 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS06495 ad64cec4eb7f19a532f05cb4e3f501d8 225 PIRSF PIRSF001461 1 225 9.5E-107 T 29-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS06495 ad64cec4eb7f19a532f05cb4e3f501d8 225 Gene3D G3DSA:3.20.20.70 1 220 8.8E-87 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS06495 ad64cec4eb7f19a532f05cb4e3f501d8 225 SUPERFAMILY SSF51366 3 218 1.04E-76 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS06495 ad64cec4eb7f19a532f05cb4e3f501d8 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS06495 ad64cec4eb7f19a532f05cb4e3f501d8 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.9E-96 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS23020 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.9E-22 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM460_RS23020 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 SUPERFAMILY SSF56784 1 247 5.7E-65 T 29-03-2018 IPR023214 HAD-like domain AM460_RS23020 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.1000 1 249 1.5E-28 T 29-03-2018 IPR023214 HAD-like domain AM460_RS23020 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.5E-19 T 29-03-2018 AM460_RS23020 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 2.1E-65 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM460_RS09370 ce285ca983cf3ecab35712196db71679 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.4E-72 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AM460_RS09370 ce285ca983cf3ecab35712196db71679 197 Pfam PF01725 Ham1 family 4 192 6.5E-58 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AM460_RS09370 ce285ca983cf3ecab35712196db71679 197 SUPERFAMILY SSF52972 1 195 2.88E-75 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS09370 ce285ca983cf3ecab35712196db71679 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.843 T 29-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 AM460_RS09370 ce285ca983cf3ecab35712196db71679 197 Gene3D G3DSA:3.90.950.10 1 197 1.5E-81 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS18695 6305aaba76e728bf5c46b861d9656571 248 SUPERFAMILY SSF52540 67 230 2.13E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18695 6305aaba76e728bf5c46b861d9656571 248 PIRSF PIRSF003073 2 248 2.2E-49 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS18695 6305aaba76e728bf5c46b861d9656571 248 Gene3D G3DSA:3.40.50.300 49 225 2.8E-15 T 29-03-2018 AM460_RS18695 6305aaba76e728bf5c46b861d9656571 248 Pfam PF01695 IstB-like ATP binding protein 74 218 3.9E-19 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF01595 Domain of unknown function DUF21 2 169 9.7E-49 T 29-03-2018 IPR002550 Domain of unknown function DUF21 AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 Gene3D G3DSA:3.10.580.10 170 323 2.2E-20 T 29-03-2018 AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 SUPERFAMILY SSF54631 177 314 5.98E-23 T 29-03-2018 AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 SUPERFAMILY SSF56176 325 407 1.2E-21 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF00571 CBS domain 263 311 1.1E-4 T 29-03-2018 IPR000644 CBS domain AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 Gene3D G3DSA:3.30.465.10 324 413 2.0E-19 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF03471 Transporter associated domain 329 403 1.2E-18 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS11320 02e1bca41ed82d7c403c4d61f8e3d64e 413 SMART SM01091 327 405 1.7E-25 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS14855 d2701625661e9ab22487ce301bc6f4de 60 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 47 1.2E-7 T 29-03-2018 IPR019226 Protein of unknown function DUF2158 AM460_RS02075 724056da5dcde608dc50e9bb32aa291c 112 Pfam PF03091 CutA1 divalent ion tolerance protein 12 109 5.8E-34 T 29-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AM460_RS02075 724056da5dcde608dc50e9bb32aa291c 112 SUPERFAMILY SSF54913 10 111 3.11E-35 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM460_RS02075 724056da5dcde608dc50e9bb32aa291c 112 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 6 112 36.643 T 29-03-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 AM460_RS02075 724056da5dcde608dc50e9bb32aa291c 112 Gene3D G3DSA:3.30.70.120 4 112 1.7E-38 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 Gene3D G3DSA:1.20.1250.20 252 489 1.3E-7 T 29-03-2018 AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 Pfam PF00854 POT family 77 443 5.3E-96 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 140 152 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 Hamap MF_01880 Dipeptide permease D [dtpD]. 1 493 63.554 T 29-03-2018 IPR023777 Amino acid/peptide transporter family, dipeptide permease D GO:0005887|GO:0042938 AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 65 89 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 463 2.8E-79 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 Gene3D G3DSA:1.20.1250.20 3 195 5.0E-27 T 29-03-2018 AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 SUPERFAMILY SSF103473 260 480 1.31E-27 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS22835 b4294d26142aeb75d02b73c28be6ba37 493 SUPERFAMILY SSF103473 7 206 1.31E-27 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS03240 1dd4932167b8b205ad1935dd7e482ce6 119 Pfam PF07226 Protein of unknown function (DUF1422) 3 114 2.6E-54 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 AM460_RS03240 1dd4932167b8b205ad1935dd7e482ce6 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 6.0E-64 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 AM460_RS01000 0a423cd80a150491ab966a124bc0111a 148 SUPERFAMILY SSF102712 73 114 6.02E-5 T 29-03-2018 AM460_RS01000 0a423cd80a150491ab966a124bc0111a 148 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 148 4.5E-44 T 29-03-2018 IPR001405 RadC protein AM460_RS01000 0a423cd80a150491ab966a124bc0111a 148 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 97 102 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM460_RS01000 0a423cd80a150491ab966a124bc0111a 148 Pfam PF04002 RadC-like JAB domain 28 146 3.0E-43 T 29-03-2018 IPR025657 RadC-like JAB domain AM460_RS01000 0a423cd80a150491ab966a124bc0111a 148 Gene3D G3DSA:3.40.140.10 25 148 2.3E-47 T 29-03-2018 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 2.8E-27 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Gene3D G3DSA:3.30.2320.20 802 896 9.1E-26 T 29-03-2018 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 1.1E-235 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 SUPERFAMILY SSF47323 652 929 1.05E-79 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.604 T 29-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 1.8E-9 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Gene3D G3DSA:1.10.730.10 578 794 1.3E-45 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 SUPERFAMILY SSF50677 204 403 2.41E-56 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 5.6E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 5.6E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 5.6E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.6E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 5.6E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Gene3D G3DSA:3.90.740.10 205 500 4.9E-94 T 29-03-2018 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 SUPERFAMILY SSF52374 403 648 7.1E-137 T 29-03-2018 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 SUPERFAMILY SSF52374 3 202 7.1E-137 T 29-03-2018 AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 Gene3D G3DSA:3.40.50.620 42 123 5.2E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS26295 040d9edaf38f7b3f94fc3b7771845492 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 0.0 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.8E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.8E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 SMART SM00420 6 58 1.0E-28 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 SMART SM01134 72 233 7.8E-73 T 29-03-2018 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 SUPERFAMILY SSF100950 73 234 5.44E-31 T 29-03-2018 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 7.5E-56 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 Gene3D G3DSA:3.40.50.1360 64 243 7.8E-41 T 29-03-2018 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 8.0E-26 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 Gene3D G3DSA:1.10.10.10 1 61 9.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06290 df6b9818547b912e587d9e1b42bf4744 252 SUPERFAMILY SSF46785 3 76 1.43E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15760 31064f5e770b03f25ececcfcbfe7f608 220 Pfam PF00929 Exonuclease 4 147 1.8E-14 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS15760 31064f5e770b03f25ececcfcbfe7f608 220 Gene3D G3DSA:3.30.420.10 1 164 4.3E-30 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS15760 31064f5e770b03f25ececcfcbfe7f608 220 SMART SM00479 1 156 7.0E-40 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS15760 31064f5e770b03f25ececcfcbfe7f608 220 SUPERFAMILY SSF53098 4 183 1.87E-34 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 Pfam PF00691 OmpA family 226 321 3.0E-23 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 Gene3D G3DSA:2.40.160.20 9 210 1.8E-48 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 SUPERFAMILY SSF103088 215 338 1.26E-36 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 ProSitePatterns PS01068 OmpA-like domain. 261 305 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01022 Outer membrane protein A signature 169 183 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01022 Outer membrane protein A signature 244 263 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01022 Outer membrane protein A signature 183 197 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01022 Outer membrane protein A signature 215 230 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01022 Outer membrane protein A signature 107 123 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01022 Outer membrane protein A signature 283 302 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01022 Outer membrane protein A signature 317 330 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 Gene3D G3DSA:3.30.1330.60 211 349 3.3E-41 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 SUPERFAMILY SSF56925 22 199 1.73E-46 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01021 OMPA domain signature 259 274 5.0E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01021 OMPA domain signature 274 290 5.0E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 PRINTS PR01021 OMPA domain signature 227 249 5.0E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS20755 d381cb0a53e50896eae78d8d464b83e7 350 Pfam PF01389 OmpA-like transmembrane domain 23 199 6.1E-76 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 2.6E-205 T 29-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 SMART SM00928 336 381 4.3E-22 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 Pfam PF10531 SLBB domain 253 295 1.5E-6 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 SUPERFAMILY SSF142984 248 330 1.44E-20 T 29-03-2018 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.5E-26 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 SUPERFAMILY SSF142019 16 246 1.7E-85 T 29-03-2018 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 SUPERFAMILY SSF140490 333 429 4.84E-32 T 29-03-2018 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 2.1E-49 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12920 9f88ce040ca01c86b202bd2031636d4e 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10610 a5054f006f2e67239753d975909efd64 155 SUPERFAMILY SSF50331 14 84 3.64E-21 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS10610 a5054f006f2e67239753d975909efd64 155 Gene3D G3DSA:2.40.50.100 13 77 3.4E-20 T 29-03-2018 AM460_RS10610 a5054f006f2e67239753d975909efd64 155 SUPERFAMILY SSF50331 86 153 5.59E-19 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS10610 a5054f006f2e67239753d975909efd64 155 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 15 82 1.9E-23 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM460_RS10610 a5054f006f2e67239753d975909efd64 155 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 86 153 4.8E-19 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM460_RS10610 a5054f006f2e67239753d975909efd64 155 Gene3D G3DSA:2.40.50.100 78 145 8.3E-21 T 29-03-2018 AM460_RS10610 a5054f006f2e67239753d975909efd64 155 Pfam PF03459 TOBE domain 89 149 3.4E-15 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM460_RS10610 a5054f006f2e67239753d975909efd64 155 Pfam PF03459 TOBE domain 17 79 2.8E-16 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM460_RS19375 4d8b69377185f8ac5db1f03bc4af1a8a 129 SUPERFAMILY SSF58100 3 124 8.63E-62 T 29-03-2018 AM460_RS19375 4d8b69377185f8ac5db1f03bc4af1a8a 129 Pfam PF06109 Haemolysin E (HlyE) 25 119 9.9E-35 T 29-03-2018 IPR027018 Hemolysin E GO:0009405|GO:0044179 AM460_RS19375 4d8b69377185f8ac5db1f03bc4af1a8a 129 Gene3D G3DSA:1.20.1170.10 5 120 1.1E-29 T 29-03-2018 AM460_RS25005 75f55cf046a88bdff4d7aa3122423b73 111 Pfam PF13356 Arm DNA-binding domain 8 97 3.8E-16 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 Gene3D G3DSA:3.40.50.300 330 581 6.0E-69 T 29-03-2018 AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 Pfam PF00664 ABC transporter transmembrane region 26 295 1.5E-41 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 Gene3D G3DSA:1.20.1560.10 5 329 1.9E-63 T 29-03-2018 AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 Pfam PF00005 ABC transporter 357 505 7.9E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 SUPERFAMILY SSF52540 337 576 9.57E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 SMART SM00382 366 557 1.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS24120 583fe1026ae9f7f37d8a7758f714ea33 593 SUPERFAMILY SSF90123 12 325 5.62E-70 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 SMART SM00904 184 308 1.2E-61 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 Gene3D G3DSA:3.40.50.620 1 180 5.9E-47 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 Gene3D G3DSA:2.40.30.30 181 312 2.8E-39 T 29-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 Pfam PF01687 Riboflavin kinase 185 307 4.2E-37 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 PIRSF PIRSF004491 1 312 1.1E-104 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 307 1.5E-123 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 Pfam PF06574 FAD synthetase 13 168 6.2E-58 T 29-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 SUPERFAMILY SSF82114 175 308 3.27E-43 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM460_RS26300 25ec4f764e87614d7859601d579758d8 313 SUPERFAMILY SSF52374 17 177 6.19E-33 T 29-03-2018 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 SUPERFAMILY SSF56059 140 354 1.13E-60 T 29-03-2018 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 Gene3D G3DSA:3.30.1490.20 155 212 1.9E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.921 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 Gene3D G3DSA:3.30.470.20 213 360 1.0E-42 T 29-03-2018 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 3.1E-29 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 SUPERFAMILY SSF52440 3 139 2.59E-36 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 1.8E-82 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 4.7E-120 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 Gene3D G3DSA:3.40.50.20 1 150 1.0E-43 T 29-03-2018 AM460_RS24475 f65add94e4b776260c7664152dd4d3ee 364 PIRSF PIRSF039102 1 359 4.5E-139 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03070 ba9af17b1861cdee8c27ca5e9c8dd9b1 158 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 1.9E-51 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM460_RS03070 ba9af17b1861cdee8c27ca5e9c8dd9b1 158 PIRSF PIRSF016548 1 158 6.1E-61 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM460_RS03070 ba9af17b1861cdee8c27ca5e9c8dd9b1 158 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 40.878 T 29-03-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd AM460_RS07885 c362bc18531f52be122dfc634f765dfb 454 Gene3D G3DSA:1.10.4100.10 266 442 1.5E-36 T 29-03-2018 AM460_RS07885 c362bc18531f52be122dfc634f765dfb 454 Gene3D G3DSA:3.30.1330.90 10 158 4.3E-51 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM460_RS07885 c362bc18531f52be122dfc634f765dfb 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.1E-98 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM460_RS07885 c362bc18531f52be122dfc634f765dfb 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.1E-218 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM460_RS07885 c362bc18531f52be122dfc634f765dfb 454 Pfam PF03315 Serine dehydratase beta chain 3 155 4.1E-54 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM460_RS07885 c362bc18531f52be122dfc634f765dfb 454 SUPERFAMILY SSF143548 16 158 1.46E-43 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM460_RS24650 db3badb3122bfc2196aa6c4947217f24 483 Gene3D G3DSA:1.10.4100.10 1 331 1.2E-104 T 29-03-2018 AM460_RS24650 db3badb3122bfc2196aa6c4947217f24 483 Gene3D G3DSA:1.10.4100.10 391 483 1.1E-12 T 29-03-2018 AM460_RS24650 db3badb3122bfc2196aa6c4947217f24 483 SUPERFAMILY SSF103378 13 482 9.81E-161 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 AM460_RS24650 db3badb3122bfc2196aa6c4947217f24 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 8.9E-280 T 29-03-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 AM460_RS24650 db3badb3122bfc2196aa6c4947217f24 483 Pfam PF03972 MmgE/PrpD family 18 463 7.6E-159 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 Gene3D G3DSA:3.90.226.10 56 318 2.1E-26 T 29-03-2018 AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 Pfam PF01343 Peptidase family S49 392 543 3.5E-54 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 Pfam PF01343 Peptidase family S49 141 295 2.8E-47 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 Gene3D G3DSA:3.90.226.10 319 612 1.6E-49 T 29-03-2018 AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 SUPERFAMILY SSF52096 321 440 1.99E-42 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 SUPERFAMILY SSF52096 468 530 1.99E-42 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 SUPERFAMILY SSF52096 30 181 1.99E-31 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 SUPERFAMILY SSF52096 212 287 1.99E-31 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 PIRSF PIRSF001217 8 618 3.8E-232 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 335 541 2.0E-53 T 29-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AM460_RS16170 d5a97d48a86cb759915f123f045b3704 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 1.1E-286 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM460_RS05375 2ae18b10b792f55c03562a1f6c100d29 154 SUPERFAMILY SSF51197 1 151 1.43E-44 T 29-03-2018 AM460_RS05375 2ae18b10b792f55c03562a1f6c100d29 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 5.7E-44 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS05375 2ae18b10b792f55c03562a1f6c100d29 154 Gene3D G3DSA:2.60.120.370 1 154 4.9E-47 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS05375 2ae18b10b792f55c03562a1f6c100d29 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 5.9E-64 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS21360 d0ed4e7752198c25785e578b53bdc5c4 874 Pfam PF07484 Phage Tail Collar Domain 674 720 3.8E-9 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS21360 d0ed4e7752198c25785e578b53bdc5c4 874 SUPERFAMILY SSF88874 772 873 2.54E-6 T 29-03-2018 AM460_RS21360 d0ed4e7752198c25785e578b53bdc5c4 874 Pfam PF12571 Phage tail-collar fibre protein 1 151 5.2E-57 T 29-03-2018 IPR022225 Phage tail fibre protein AM460_RS21360 d0ed4e7752198c25785e578b53bdc5c4 874 SUPERFAMILY SSF88874 669 795 4.84E-28 T 29-03-2018 AM460_RS21360 d0ed4e7752198c25785e578b53bdc5c4 874 Gene3D G3DSA:3.90.1340.10 661 812 5.3E-12 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS21360 d0ed4e7752198c25785e578b53bdc5c4 874 Pfam PF03406 Phage tail fibre repeat 170 210 1.2E-20 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS15375 cc4deb6f9e8019c747da02c4a3425943 306 PIRSF PIRSF020481 11 305 5.5E-86 T 29-03-2018 IPR014507 Baseplate assembly protein J, predicted AM460_RS15375 cc4deb6f9e8019c747da02c4a3425943 306 Pfam PF04865 Baseplate J-like protein 122 265 2.0E-21 T 29-03-2018 IPR006949 Baseplate protein J-like AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 Pfam PF00117 Glutamine amidotransferase class-I 3 186 1.8E-57 T 29-03-2018 IPR017926 Glutamine amidotransferase AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.9E-14 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.9E-14 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 6.9E-14 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 4.3E-99 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-37 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-37 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.8E-37 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-37 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-37 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-37 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 Gene3D G3DSA:3.40.50.880 1 187 1.0E-59 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.1E-6 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.1E-6 T 29-03-2018 AM460_RS06600 c89fc73ed2c2de592a61ca3a65a4ddcd 187 SUPERFAMILY SSF52317 1 186 1.07E-57 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 SUPERFAMILY SSF88659 89 156 5.67E-17 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 Gene3D G3DSA:1.10.1740.10 2 86 6.5E-22 T 29-03-2018 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 SUPERFAMILY SSF88946 5 88 3.61E-23 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 PIRSF PIRSF000770 1 238 1.1E-42 T 29-03-2018 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 Gene3D G3DSA:1.10.10.10 89 137 3.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 1.1E-32 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 SUPERFAMILY SSF88659 160 237 1.87E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 Pfam PF04545 Sigma-70, region 4 185 233 5.6E-17 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 Pfam PF04542 Sigma-70 region 2 16 88 1.9E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 Pfam PF04539 Sigma-70 region 3 97 166 5.8E-20 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 Gene3D G3DSA:1.10.10.10 145 239 2.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 2.6E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.6E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.6E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.6E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.6E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 4.4E-88 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS15060 c20fe62dfd86825e63dc84ddc671c884 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 64.511 T 29-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM460_RS23190 416e6b328d255b232fc4d25449f34574 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.806 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM460_RS23190 416e6b328d255b232fc4d25449f34574 105 SUPERFAMILY SSF81301 4 105 1.59E-37 T 29-03-2018 AM460_RS23190 416e6b328d255b232fc4d25449f34574 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.4E-38 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM460_RS23190 416e6b328d255b232fc4d25449f34574 105 Gene3D G3DSA:3.30.460.10 1 105 4.6E-35 T 29-03-2018 AM460_RS23190 416e6b328d255b232fc4d25449f34574 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.5E-28 T 29-03-2018 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 SUPERFAMILY SSF51905 2 293 1.14E-86 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 SUPERFAMILY SSF51905 476 535 1.14E-86 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 Gene3D G3DSA:3.30.560.10 103 490 2.8E-100 T 29-03-2018 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 Pfam PF00732 GMC oxidoreductase 3 300 6.1E-105 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 PIRSF PIRSF000137 1 539 8.7E-140 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 Pfam PF05199 GMC oxidoreductase 393 527 2.4E-41 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 60.274 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 Gene3D G3DSA:4.10.450.10 38 102 1.3E-24 T 29-03-2018 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 0.0 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM460_RS24775 a9eb1805cc74bec892abd3c22abf0b50 556 SUPERFAMILY SSF54373 295 477 1.67E-66 T 29-03-2018 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 8.5E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 SUPERFAMILY SSF46689 4 82 5.64E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 Gene3D G3DSA:1.10.357.10 63 223 1.1E-41 T 29-03-2018 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 Gene3D G3DSA:1.10.357.10 47 62 0.012 T 29-03-2018 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 Pfam PF09209 Domain of unknown function (DUF1956) 96 218 1.2E-37 T 29-03-2018 IPR015292 Transcription regulator YbiH, C-terminal AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 Gene3D G3DSA:1.10.10.60 2 46 1.5E-14 T 29-03-2018 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.4E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.4E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS22340 eb17600dde29ca9290bdba8adce54c62 223 SUPERFAMILY SSF48498 90 219 1.78E-36 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS11850 a60f6efe7dfc6bbc7506351b511a2c61 71 Pfam PF07191 zinc-ribbons 4 68 1.7E-30 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 AM460_RS11850 a60f6efe7dfc6bbc7506351b511a2c61 71 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 71 2.0E-35 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 AM460_RS11850 a60f6efe7dfc6bbc7506351b511a2c61 71 Gene3D G3DSA:2.20.25.10 3 32 0.016 T 29-03-2018 AM460_RS11850 a60f6efe7dfc6bbc7506351b511a2c61 71 Gene3D G3DSA:2.20.25.10 33 67 0.38 T 29-03-2018 AM460_RS11850 a60f6efe7dfc6bbc7506351b511a2c61 71 SUPERFAMILY SSF161187 1 69 1.7E-29 T 29-03-2018 IPR029037 YfgJ-like AM460_RS20775 d4cde8ccefd4aac4b796529242bb3092 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.965 T 29-03-2018 IPR007040 Ribosome modulation factor AM460_RS20775 d4cde8ccefd4aac4b796529242bb3092 55 Gene3D G3DSA:1.10.10.620 3 53 3.1E-26 T 29-03-2018 AM460_RS20775 d4cde8ccefd4aac4b796529242bb3092 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 7.0E-26 T 29-03-2018 IPR007040 Ribosome modulation factor AM460_RS20775 d4cde8ccefd4aac4b796529242bb3092 55 Pfam PF04957 Ribosome modulation factor 1 52 2.2E-30 T 29-03-2018 IPR007040 Ribosome modulation factor AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 29-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 Gene3D G3DSA:1.20.1440.90 274 388 1.9E-25 T 29-03-2018 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 29-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.495 T 29-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 SUPERFAMILY SSF51621 6 883 0.0 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 1.3E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 1.3E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.3E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 1.3E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 1.3E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.3E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.3E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS03290 199f31ee75f7faf6bf698d13c3594995 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 3.1E-295 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM460_RS14955 04f7883eb4067e4777f3da3174173415 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 2.6E-22 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM460_RS14955 04f7883eb4067e4777f3da3174173415 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 2.6E-22 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM460_RS14955 04f7883eb4067e4777f3da3174173415 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 2.6E-22 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM460_RS14955 04f7883eb4067e4777f3da3174173415 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 104 7.2E-43 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM460_RS14955 04f7883eb4067e4777f3da3174173415 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 104 18.056 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM460_RS14955 04f7883eb4067e4777f3da3174173415 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 104 1.1E-27 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM460_RS13545 5b75ada18240394060447a831d9188d8 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 6.0E-118 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM460_RS13545 5b75ada18240394060447a831d9188d8 285 SUPERFAMILY SSF51658 1 277 5.24E-105 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS13545 5b75ada18240394060447a831d9188d8 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM460_RS13545 5b75ada18240394060447a831d9188d8 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 6.3E-44 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS13545 5b75ada18240394060447a831d9188d8 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM460_RS13545 5b75ada18240394060447a831d9188d8 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM460_RS13545 5b75ada18240394060447a831d9188d8 285 Gene3D G3DSA:3.20.20.150 1 285 1.5E-64 T 29-03-2018 AM460_RS13545 5b75ada18240394060447a831d9188d8 285 SMART SM00518 3 279 3.2E-146 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM460_RS13545 5b75ada18240394060447a831d9188d8 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 45.181 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM460_RS07810 f3f729a1b7a7ca1fa5fbef68e9b3da33 111 SUPERFAMILY SSF89447 13 40 6.1E-5 T 29-03-2018 AM460_RS07810 f3f729a1b7a7ca1fa5fbef68e9b3da33 111 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 14 110 1.5E-38 T 29-03-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 AM460_RS07810 f3f729a1b7a7ca1fa5fbef68e9b3da33 111 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 14 101 3.0E-47 T 29-03-2018 AM460_RS07810 f3f729a1b7a7ca1fa5fbef68e9b3da33 111 Gene3D G3DSA:2.10.260.10 14 56 6.8E-8 T 29-03-2018 AM460_RS10400 b5d2f99238714ccd0a650f3520e1469d 505 Pfam PF02264 LamB porin 97 505 6.7E-100 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS10400 b5d2f99238714ccd0a650f3520e1469d 505 Gene3D G3DSA:3.90.20.10 20 95 4.0E-4 T 29-03-2018 AM460_RS10400 b5d2f99238714ccd0a650f3520e1469d 505 Pfam PF11471 Maltoporin periplasmic N-terminal extension 2 55 1.8E-16 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain AM460_RS10400 b5d2f99238714ccd0a650f3520e1469d 505 Gene3D G3DSA:2.40.170.10 96 505 3.3E-114 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS10400 b5d2f99238714ccd0a650f3520e1469d 505 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 101 501 0.0 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS10400 b5d2f99238714ccd0a650f3520e1469d 505 SUPERFAMILY SSF56935 94 505 3.78E-138 T 29-03-2018 AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 Pfam PF00294 pfkB family carbohydrate kinase 59 348 3.3E-61 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 303 316 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 SUPERFAMILY SSF53613 61 348 1.5E-54 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 9.5E-12 T 29-03-2018 AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 SUPERFAMILY SSF46785 1 54 2.78E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 Gene3D G3DSA:3.40.1190.20 57 356 5.6E-49 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13540 76771b1b1e154cdaa3417b514fe89dcc 362 Gene3D G3DSA:1.10.10.10 1 56 3.3E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 ProSitePatterns PS00769 Transthyretin signature 2. 120 132 - T 29-03-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 ProSitePatterns PS00768 Transthyretin signature 1. 32 47 - T 29-03-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 SUPERFAMILY SSF49472 26 137 3.66E-43 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 PRINTS PR00189 Transthyretin signature 115 137 1.1E-13 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 PRINTS PR00189 Transthyretin signature 28 48 1.1E-13 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 PRINTS PR00189 Transthyretin signature 60 85 1.1E-13 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 Pfam PF00576 HIUase/Transthyretin family 29 136 4.2E-38 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 27 137 5.9E-45 T 29-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 SMART SM00095 24 136 8.1E-4 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS14790 5961fb69efd388fade0af0c8eab96f81 137 Gene3D G3DSA:2.60.40.180 21 137 1.7E-45 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM460_RS00755 dc11874196efa727820767040f456e5e 392 SUPERFAMILY SSF103473 12 381 1.57E-28 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS00755 dc11874196efa727820767040f456e5e 392 Gene3D G3DSA:1.20.1250.20 208 382 1.0E-12 T 29-03-2018 AM460_RS00755 dc11874196efa727820767040f456e5e 392 Gene3D G3DSA:1.20.1250.20 9 198 1.2E-8 T 29-03-2018 AM460_RS00755 dc11874196efa727820767040f456e5e 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 380 4.5E-135 T 29-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB AM460_RS01770 0373f0dcb85ad5deb6a8d78e37a5b8da 101 Gene3D G3DSA:3.40.50.2300 1 97 8.6E-18 T 29-03-2018 AM460_RS01770 0373f0dcb85ad5deb6a8d78e37a5b8da 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 1.1E-13 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS01770 0373f0dcb85ad5deb6a8d78e37a5b8da 101 SUPERFAMILY SSF52794 3 95 7.59E-18 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS19715 326c6b8ad45ffeed3a4fbdc76358461d 97 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 96 1.0E-50 T 29-03-2018 IPR010438 Bor GO:0009279 AM460_RS19715 326c6b8ad45ffeed3a4fbdc76358461d 97 Pfam PF06291 Bor protein 19 95 8.9E-32 T 29-03-2018 IPR010438 Bor GO:0009279 AM460_RS11670 d5ef822dd9a46f7c3766aa89859738d0 327 SUPERFAMILY SSF53822 29 312 4.71E-47 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS11670 d5ef822dd9a46f7c3766aa89859738d0 327 Gene3D G3DSA:3.40.50.2300 157 316 3.6E-16 T 29-03-2018 AM460_RS11670 d5ef822dd9a46f7c3766aa89859738d0 327 Pfam PF13407 Periplasmic binding protein domain 40 294 4.0E-31 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS11670 d5ef822dd9a46f7c3766aa89859738d0 327 Gene3D G3DSA:3.40.50.2300 25 156 1.0E-18 T 29-03-2018 AM460_RS12465 a1b3f0db2d213a76874f2397cd2e2bf2 416 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 416 65.257 T 29-03-2018 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 AM460_RS12465 a1b3f0db2d213a76874f2397cd2e2bf2 416 Pfam PF02515 CoA-transferase family III 5 393 6.9E-94 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM460_RS12465 a1b3f0db2d213a76874f2397cd2e2bf2 416 SUPERFAMILY SSF89796 1 416 2.09E-125 T 29-03-2018 IPR023606 CoA-transferase family III domain AM460_RS12465 a1b3f0db2d213a76874f2397cd2e2bf2 416 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 416 4.9E-237 T 29-03-2018 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 AM460_RS12465 a1b3f0db2d213a76874f2397cd2e2bf2 416 Gene3D G3DSA:3.40.50.10540 1 416 9.5E-120 T 29-03-2018 IPR023606 CoA-transferase family III domain AM460_RS16980 11b1353752410adee376733358a938c2 342 SUPERFAMILY SSF47413 5 64 3.38E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS16980 11b1353752410adee376733358a938c2 342 SMART SM00354 6 76 2.9E-33 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS16980 11b1353752410adee376733358a938c2 342 SUPERFAMILY SSF53822 63 338 7.57E-51 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS16980 11b1353752410adee376733358a938c2 342 Gene3D G3DSA:1.10.260.40 7 59 3.6E-20 T 29-03-2018 AM460_RS16980 11b1353752410adee376733358a938c2 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 341 3.1E-99 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM460_RS16980 11b1353752410adee376733358a938c2 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 29-03-2018 AM460_RS16980 11b1353752410adee376733358a938c2 342 Gene3D G3DSA:3.40.50.2300 60 180 4.2E-34 T 29-03-2018 AM460_RS16980 11b1353752410adee376733358a938c2 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 8.7E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS16980 11b1353752410adee376733358a938c2 342 Gene3D G3DSA:3.40.50.2300 181 330 2.0E-27 T 29-03-2018 AM460_RS26050 4801705ea3cb2d5bd9809d6017ac2af3 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 267 9.0E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS26050 4801705ea3cb2d5bd9809d6017ac2af3 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 524 1.6E-7 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS26050 4801705ea3cb2d5bd9809d6017ac2af3 536 SUPERFAMILY SSF161098 289 527 1.42E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS26050 4801705ea3cb2d5bd9809d6017ac2af3 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 5.4E-296 T 29-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AM460_RS26050 4801705ea3cb2d5bd9809d6017ac2af3 536 Gene3D G3DSA:1.10.3720.10 11 273 2.4E-31 T 29-03-2018 AM460_RS26050 4801705ea3cb2d5bd9809d6017ac2af3 536 SUPERFAMILY SSF161098 12 265 2.8E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS26050 4801705ea3cb2d5bd9809d6017ac2af3 536 Gene3D G3DSA:1.10.3720.10 322 534 2.0E-26 T 29-03-2018 AM460_RS16620 2b628c53358ddca66dd97eb7d30d29e9 122 SUPERFAMILY SSF89360 18 111 6.08E-27 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS16620 2b628c53358ddca66dd97eb7d30d29e9 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 1.2E-32 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM460_RS16620 2b628c53358ddca66dd97eb7d30d29e9 122 Gene3D G3DSA:2.60.300.12 18 122 2.9E-31 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS16620 2b628c53358ddca66dd97eb7d30d29e9 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 4.1E-19 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS16620 2b628c53358ddca66dd97eb7d30d29e9 122 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 2.2E-51 T 29-03-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 AM460_RS16620 2b628c53358ddca66dd97eb7d30d29e9 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM460_RS10570 83184c5ea2c826bf6425347d270e365d 258 SUPERFAMILY SSF51658 1 256 2.23E-83 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS10570 83184c5ea2c826bf6425347d270e365d 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 4.7E-34 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS10570 83184c5ea2c826bf6425347d270e365d 258 Gene3D G3DSA:3.20.20.150 1 258 1.8E-55 T 29-03-2018 AM460_RS10570 83184c5ea2c826bf6425347d270e365d 258 PIRSF PIRSF006241 1 258 5.5E-87 T 29-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 TIGRFAM TIGR03176 AllC: allantoate amidohydrolase 1 411 1.8E-231 T 29-03-2018 IPR017591 Allantoate amidohydrolase GO:0000256|GO:0009442|GO:0030145|GO:0042803|GO:0047652 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 7 407 2.3E-198 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 SUPERFAMILY SSF55031 212 328 1.64E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 SUPERFAMILY SSF53187 338 408 1.77E-82 T 29-03-2018 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 SUPERFAMILY SSF53187 6 221 1.77E-82 T 29-03-2018 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 PIRSF PIRSF001235 2 411 1.6E-132 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 Gene3D G3DSA:3.40.630.10 1 245 9.4E-36 T 29-03-2018 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 Gene3D G3DSA:3.40.630.10 246 411 3.2E-27 T 29-03-2018 AM460_RS23755 33188da9c18bef3e7f71d57ce4d1386f 411 Pfam PF01546 Peptidase family M20/M25/M40 79 405 7.4E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Gene3D G3DSA:3.40.309.10 902 1094 1.8E-45 T 29-03-2018 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 SUPERFAMILY SSF47598 3 45 3.11E-10 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 148 259 3.9E-46 T 29-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 SUPERFAMILY SSF51730 262 618 1.14E-123 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Gene3D G3DSA:3.40.605.10 648 901 6.1E-72 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Pfam PF01619 Proline dehydrogenase 270 569 8.8E-100 T 29-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Gene3D G3DSA:1.10.1220.10 2 49 3.3E-5 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Gene3D G3DSA:3.20.20.220 178 610 1.3E-110 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 SUPERFAMILY SSF81935 88 261 5.1E-67 T 29-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1112 5.1E-263 T 29-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1105 2.7E-113 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 PIRSF PIRSF000197 74 1320 0.0 T 29-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 SUPERFAMILY SSF53720 657 1110 1.96E-125 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS20490 e54327b46dc88189f116589cb899e7d2 1320 Gene3D G3DSA:1.20.5.550 89 137 4.5E-19 T 29-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM460_RS06310 7fe1e1420611a0ef5710a8a72c10cc60 797 SUPERFAMILY SSF53756 8 795 4.4E-296 T 29-03-2018 AM460_RS06310 7fe1e1420611a0ef5710a8a72c10cc60 797 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS06310 7fe1e1420611a0ef5710a8a72c10cc60 797 Gene3D G3DSA:3.40.50.2000 460 780 9.4E-134 T 29-03-2018 AM460_RS06310 7fe1e1420611a0ef5710a8a72c10cc60 797 PIRSF PIRSF000460 1 797 3.3E-206 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS06310 7fe1e1420611a0ef5710a8a72c10cc60 797 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 9 794 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS06310 7fe1e1420611a0ef5710a8a72c10cc60 797 Gene3D G3DSA:3.40.50.2000 8 459 5.1E-173 T 29-03-2018 AM460_RS06310 7fe1e1420611a0ef5710a8a72c10cc60 797 Pfam PF00343 Carbohydrate phosphorylase 92 794 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 Gene3D G3DSA:1.20.1250.20 206 417 1.8E-18 T 29-03-2018 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 315 334 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 214 242 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 260 281 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 284 310 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 PRINTS PR00174 LacY proton/sugar symporter family signature 346 366 2.3E-111 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 401 4.2E-209 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 64 78 - T 29-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 Gene3D G3DSA:1.20.1250.20 1 201 1.1E-26 T 29-03-2018 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 SUPERFAMILY SSF103473 6 401 1.05E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 Pfam PF01306 LacY proton/sugar symporter 2 412 6.8E-206 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM460_RS24625 f6534ca4c40bee96119fdf71318d7dd5 417 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 280 294 - T 29-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 Gene3D G3DSA:3.30.70.20 49 127 5.4E-16 T 29-03-2018 AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 Gene3D G3DSA:3.30.70.20 169 292 5.3E-14 T 29-03-2018 AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 3.1E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 Gene3D G3DSA:3.30.70.20 128 168 1.5E-17 T 29-03-2018 AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 Pfam PF13247 4Fe-4S dicluster domain 106 207 8.2E-23 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 SUPERFAMILY SSF54862 38 325 1.0E-71 T 29-03-2018 AM460_RS08575 559b90c15a7b7848180505bb11f16b74 328 Gene3D G3DSA:3.30.70.20 17 48 0.018 T 29-03-2018 AM460_RS02465 0bae4a4eb9c9ae9ba1019f18212300fc 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 8.0E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02465 0bae4a4eb9c9ae9ba1019f18212300fc 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 53 2.1E-12 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM460_RS02465 0bae4a4eb9c9ae9ba1019f18212300fc 277 SUPERFAMILY SSF161098 72 258 6.93E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02465 0bae4a4eb9c9ae9ba1019f18212300fc 277 Gene3D G3DSA:1.10.3720.10 5 266 1.3E-44 T 29-03-2018 AM460_RS22830 7a7a9f6c939827d7fe855878d5750c8b 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 6.0E-57 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM460_RS22830 7a7a9f6c939827d7fe855878d5750c8b 247 SUPERFAMILY SSF102705 1 246 1.83E-84 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM460_RS22830 7a7a9f6c939827d7fe855878d5750c8b 247 Gene3D G3DSA:3.40.1390.30 110 218 4.2E-31 T 29-03-2018 AM460_RS22830 7a7a9f6c939827d7fe855878d5750c8b 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 9.1E-83 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM460_RS22830 7a7a9f6c939827d7fe855878d5750c8b 247 Gene3D G3DSA:3.40.1390.30 1 109 6.4E-29 T 29-03-2018 AM460_RS03915 0c58443f77902b98b48e0f00950dd321 251 SUPERFAMILY SSF53335 18 249 6.97E-53 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS03915 0c58443f77902b98b48e0f00950dd321 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.615 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM460_RS03915 0c58443f77902b98b48e0f00950dd321 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM460_RS03915 0c58443f77902b98b48e0f00950dd321 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM460_RS03915 0c58443f77902b98b48e0f00950dd321 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 1.5E-113 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM460_RS03915 0c58443f77902b98b48e0f00950dd321 251 Gene3D G3DSA:3.40.50.150 2 250 3.3E-48 T 29-03-2018 AM460_RS03915 0c58443f77902b98b48e0f00950dd321 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.6E-89 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM460_RS25850 8741296e316e5c3f2bf6110c94605a04 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS25850 8741296e316e5c3f2bf6110c94605a04 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.8E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS25850 8741296e316e5c3f2bf6110c94605a04 146 Gene3D G3DSA:3.30.700.10 7 139 1.2E-24 T 29-03-2018 AM460_RS25850 8741296e316e5c3f2bf6110c94605a04 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.6E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS25850 8741296e316e5c3f2bf6110c94605a04 146 SUPERFAMILY SSF54523 7 113 4.76E-23 T 29-03-2018 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 Gene3D G3DSA:1.10.10.60 204 229 2.0E-4 T 29-03-2018 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 Gene3D G3DSA:2.60.120.280 10 203 9.8E-15 T 29-03-2018 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 Pfam PF12833 Helix-turn-helix domain 201 273 1.6E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 SUPERFAMILY SSF46689 225 275 1.57E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 Gene3D G3DSA:1.10.10.60 230 280 9.3E-12 T 29-03-2018 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 3.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 3.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 SMART SM00342 189 272 3.0E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 Pfam PF07883 Cupin domain 29 81 5.1E-8 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS16340 fe58b922555047449ac3d5da6a292cd5 280 SUPERFAMILY SSF51182 25 161 3.38E-15 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 2.1E-19 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 1.4E-35 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.40.120.10 332 442 1.5E-27 T 29-03-2018 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 7.6E-31 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF53738 26 235 5.65E-49 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF55957 433 544 5.93E-20 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.40.120.10 214 331 9.4E-21 T 29-03-2018 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.30.310.50 443 546 9.5E-21 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 29-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF53738 209 317 6.59E-8 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 3.8E-8 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.40.120.10 12 213 3.4E-46 T 29-03-2018 AM460_RS22900 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF53738 305 446 2.24E-32 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 Gene3D G3DSA:1.20.1250.20 12 202 1.3E-28 T 29-03-2018 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 4.4E-9 T 29-03-2018 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 4.4E-9 T 29-03-2018 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 4.4E-9 T 29-03-2018 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 4.4E-9 T 29-03-2018 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 4.4E-9 T 29-03-2018 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 SUPERFAMILY SSF103473 251 451 5.23E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 SUPERFAMILY SSF103473 10 195 5.23E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 Gene3D G3DSA:1.20.1250.20 262 457 2.1E-25 T 29-03-2018 AM460_RS15840 dc4489023d2c6b80264d274d87ebff3c 457 Pfam PF07690 Major Facilitator Superfamily 22 412 1.4E-50 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 SMART SM00922 128 259 6.6E-14 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 Pfam PF13378 Enolase C-terminal domain-like 194 379 7.4E-42 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 Gene3D G3DSA:3.20.20.120 118 373 4.0E-57 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 Gene3D G3DSA:3.30.390.10 2 117 1.0E-34 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 110 3.4E-35 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 SUPERFAMILY SSF54826 1 112 8.06E-34 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS17200 ddc674e740eeb96007d6cf4b294e57af 404 SUPERFAMILY SSF51604 98 388 1.1E-78 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.7E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.7E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 SUPERFAMILY SSF46785 8 79 3.31E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 SMART SM00895 100 226 7.0E-22 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 SMART SM00345 16 75 1.6E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 Gene3D G3DSA:1.20.120.530 87 236 1.9E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 Pfam PF07729 FCD domain 100 225 9.9E-25 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 SUPERFAMILY SSF48008 99 232 1.09E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 Gene3D G3DSA:1.10.10.10 7 76 4.0E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22800 5ff83d79e5279b9144cc80b34c9ef4f5 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 4.6E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.945 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 SUPERFAMILY SSF51412 6 336 6.15E-100 T 29-03-2018 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 Gene3D G3DSA:3.20.20.70 8 341 1.2E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 PIRSF PIRSF000235 1 347 8.6E-200 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 5.2E-214 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 SMART SM01240 7 347 2.3E-139 T 29-03-2018 AM460_RS25865 5c4151b3545ff56136334f0e93559c24 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 4.0E-78 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM460_RS21830 abc501f5c77c7a30b01513b7fa11f8ce 203 SUPERFAMILY SSF89392 22 202 1.22E-57 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM460_RS21830 abc501f5c77c7a30b01513b7fa11f8ce 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 1.1E-58 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AM460_RS21830 abc501f5c77c7a30b01513b7fa11f8ce 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 33.028 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM460_RS21830 abc501f5c77c7a30b01513b7fa11f8ce 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 5.6E-124 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM460_RS21830 abc501f5c77c7a30b01513b7fa11f8ce 203 Gene3D G3DSA:2.50.20.10 19 202 8.3E-41 T 29-03-2018 AM460_RS26310 fb4da09f65b6c5940f6e07713a8e2d6f 87 Gene3D G3DSA:1.20.58.110 1 87 2.2E-29 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS26310 fb4da09f65b6c5940f6e07713a8e2d6f 87 Pfam PF01649 Ribosomal protein S20 2 84 1.8E-27 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS26310 fb4da09f65b6c5940f6e07713a8e2d6f 87 SUPERFAMILY SSF46992 3 86 1.57E-31 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS26310 fb4da09f65b6c5940f6e07713a8e2d6f 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.2E-34 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS26310 fb4da09f65b6c5940f6e07713a8e2d6f 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS26310 fb4da09f65b6c5940f6e07713a8e2d6f 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.208 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS17390 a743ef7b4e4878532fd53df2d0f841c0 883 Pfam PF00577 Outer membrane usher protein 213 795 5.1E-201 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS17390 a743ef7b4e4878532fd53df2d0f841c0 883 Pfam PF13954 PapC N-terminal domain 43 195 7.7E-46 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS17390 a743ef7b4e4878532fd53df2d0f841c0 883 SUPERFAMILY SSF141729 41 171 1.44E-33 T 29-03-2018 AM460_RS17390 a743ef7b4e4878532fd53df2d0f841c0 883 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 330 340 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM460_RS17390 a743ef7b4e4878532fd53df2d0f841c0 883 Pfam PF13953 PapC C-terminal domain 804 868 2.3E-22 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 SUPERFAMILY SSF81301 525 815 2.22E-89 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Pfam PF08335 GlnD PII-uridylyltransferase 825 916 4.3E-12 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 4.6E-46 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 945 20.205 T 29-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Gene3D G3DSA:1.20.120.330 812 946 6.3E-37 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 SUPERFAMILY SSF81593 818 943 1.96E-33 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Gene3D G3DSA:1.10.4050.10 526 637 3.3E-23 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Gene3D G3DSA:1.10.4050.10 1 110 8.8E-22 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 SUPERFAMILY SSF81593 287 436 1.26E-46 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 SUPERFAMILY SSF81301 9 286 5.76E-91 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Gene3D G3DSA:3.30.460.10 638 811 3.5E-60 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Gene3D G3DSA:3.30.460.10 111 284 5.1E-58 T 29-03-2018 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 1.1E-102 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 31 276 5.1E-99 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM460_RS08220 cc6c56fe153029171c49e7decbb6b5f2 946 Gene3D G3DSA:1.20.120.330 285 440 7.0E-51 T 29-03-2018 AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 Pfam PF00455 DeoR C terminal sensor domain 89 247 3.6E-56 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 Gene3D G3DSA:1.10.10.10 2 68 3.0E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 SMART SM00420 18 70 9.2E-22 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 Pfam PF08220 DeoR-like helix-turn-helix domain 18 74 6.7E-21 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 SUPERFAMILY SSF46785 16 71 9.31E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 SUPERFAMILY SSF100950 89 249 8.37E-33 T 29-03-2018 AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 Gene3D G3DSA:3.40.50.1360 79 251 5.8E-42 T 29-03-2018 AM460_RS07800 ee2d2e7a80323569820151d9dbb37af8 269 SMART SM01134 87 248 6.7E-71 T 29-03-2018 AM460_RS14555 4a6f15be929cd28e3c6dc157507431ae 217 Pfam PF02585 GlcNAc-PI de-N-acetylase 15 135 1.7E-18 T 29-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AM460_RS14555 4a6f15be929cd28e3c6dc157507431ae 217 Gene3D G3DSA:3.40.50.10320 1 217 2.1E-31 T 29-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AM460_RS14555 4a6f15be929cd28e3c6dc157507431ae 217 SUPERFAMILY SSF102588 13 216 1.96E-39 T 29-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AM460_RS15110 a52a7859fbfd934bc77137489798d420 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.88 T 29-03-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM460_RS15110 a52a7859fbfd934bc77137489798d420 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 1.6E-66 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM460_RS15110 a52a7859fbfd934bc77137489798d420 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 4.2E-17 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM460_RS15110 a52a7859fbfd934bc77137489798d420 182 PIRSF PIRSF000847 1 179 8.7E-43 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM460_RS15110 a52a7859fbfd934bc77137489798d420 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 328 359 4.8E-7 T 29-03-2018 IPR013425 Autotransporter-associated beta strand repeat AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 228 248 2.5E-5 T 29-03-2018 IPR003368 Polymorphic outer membrane protein repeat AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 124 146 4.8E-4 T 29-03-2018 IPR003368 Polymorphic outer membrane protein repeat AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 SUPERFAMILY SSF103515 973 1252 1.19E-31 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 Pfam PF03797 Autotransporter beta-domain 991 1230 4.7E-33 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 SUPERFAMILY SSF51126 92 267 2.35E-5 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 Gene3D G3DSA:2.160.20.20 69 922 1.7E-35 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 SMART SM00869 986 1241 1.6E-33 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 SUPERFAMILY SSF51126 414 922 4.39E-40 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 811 1252 1.9E-111 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS13160 eedd24de2207c05d60d42aab838e0c78 1252 Gene3D G3DSA:2.40.128.130 955 1252 1.2E-32 T 29-03-2018 AM460_RS06250 838205352281ee3792f39070eaba1e18 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 47.143 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM460_RS06250 838205352281ee3792f39070eaba1e18 477 Gene3D G3DSA:3.40.50.2000 262 472 4.1E-32 T 29-03-2018 AM460_RS06250 838205352281ee3792f39070eaba1e18 477 Pfam PF08323 Starch synthase catalytic domain 2 233 1.3E-71 T 29-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM460_RS06250 838205352281ee3792f39070eaba1e18 477 SUPERFAMILY SSF53756 5 476 5.58E-117 T 29-03-2018 AM460_RS06250 838205352281ee3792f39070eaba1e18 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.7E-176 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM460_RS06250 838205352281ee3792f39070eaba1e18 477 Gene3D G3DSA:3.40.50.2000 14 261 5.4E-12 T 29-03-2018 AM460_RS06250 838205352281ee3792f39070eaba1e18 477 Pfam PF00534 Glycosyl transferases group 1 288 438 2.0E-12 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM460_RS17610 136c6d7d5a70ef655642a5da899acd33 700 Gene3D G3DSA:2.40.170.20 158 696 5.0E-80 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS17610 136c6d7d5a70ef655642a5da899acd33 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 151 2.0E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS17610 136c6d7d5a70ef655642a5da899acd33 700 Gene3D G3DSA:2.170.130.10 23 157 3.3E-26 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS17610 136c6d7d5a70ef655642a5da899acd33 700 Pfam PF00593 TonB dependent receptor 247 695 5.2E-55 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS17610 136c6d7d5a70ef655642a5da899acd33 700 SUPERFAMILY SSF56935 25 696 2.67E-120 T 29-03-2018 AM460_RS11515 b152b24a8899546dec1b23b6a8b431d3 245 SUPERFAMILY SSF53335 15 170 2.04E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS11515 b152b24a8899546dec1b23b6a8b431d3 245 Gene3D G3DSA:3.40.50.150 8 241 9.7E-28 T 29-03-2018 AM460_RS11515 b152b24a8899546dec1b23b6a8b431d3 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 56.139 T 29-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 AM460_RS11515 b152b24a8899546dec1b23b6a8b431d3 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS11515 b152b24a8899546dec1b23b6a8b431d3 245 Pfam PF05175 Methyltransferase small domain 46 130 6.1E-13 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM460_RS21365 3a49033a26a1723f31051212d1b51ba6 176 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 143 9.1E-52 T 29-03-2018 IPR006521 Tail protein I AM460_RS21365 3a49033a26a1723f31051212d1b51ba6 176 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 4.6E-65 T 29-03-2018 IPR006521 Tail protein I AM460_RS19850 f25df791cfb8b491bf1114cc43d24a20 73 SUPERFAMILY SSF57716 34 69 1.57E-5 T 29-03-2018 AM460_RS19850 f25df791cfb8b491bf1114cc43d24a20 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 64 4.5E-9 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM460_RS21320 2416b032297cb400d4f4b4a1d191ba7c 509 Pfam PF10145 Phage-related minor tail protein 239 440 2.0E-39 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS21320 2416b032297cb400d4f4b4a1d191ba7c 509 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 505 2.8E-95 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS21320 2416b032297cb400d4f4b4a1d191ba7c 509 Gene3D G3DSA:1.20.58.60 22 143 3.5E-4 T 29-03-2018 AM460_RS21320 2416b032297cb400d4f4b4a1d191ba7c 509 Gene3D G3DSA:1.20.58.60 144 496 0.4 T 29-03-2018 AM460_RS25390 b73241c9d4bb4ad3c962e0012628301a 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.24 T 29-03-2018 IPR022898 Ribonuclease HII GO:0004523 AM460_RS25390 b73241c9d4bb4ad3c962e0012628301a 198 Pfam PF01351 Ribonuclease HII 13 188 5.4E-39 T 29-03-2018 IPR024567 Ribonuclease HII/HIII domain AM460_RS25390 b73241c9d4bb4ad3c962e0012628301a 198 Gene3D G3DSA:3.30.420.10 3 198 4.8E-69 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS25390 b73241c9d4bb4ad3c962e0012628301a 198 SUPERFAMILY SSF53098 3 195 8.04E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 Gene3D G3DSA:3.40.630.30 297 442 2.7E-20 T 29-03-2018 AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 Gene3D G3DSA:3.40.1160.10 7 294 5.7E-55 T 29-03-2018 AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 SUPERFAMILY SSF55729 256 418 2.44E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 Pfam PF00583 Acetyltransferase (GNAT) family 336 413 7.8E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 SUPERFAMILY SSF53633 6 291 3.4E-70 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 234.682 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 2.1E-197 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 PIRSF PIRSF000423 1 442 1.5E-210 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM460_RS10010 80dcafed99bc55e0b35cdea8bbc7a9af 443 Pfam PF00696 Amino acid kinase family 26 268 2.5E-33 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS21895 c64c5cd3b017f8ddbdbc97654fe7213d 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS21895 c64c5cd3b017f8ddbdbc97654fe7213d 648 Pfam PF00005 ABC transporter 24 172 7.8E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS21895 c64c5cd3b017f8ddbdbc97654fe7213d 648 SUPERFAMILY SSF52540 4 227 4.44E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21895 c64c5cd3b017f8ddbdbc97654fe7213d 648 Pfam PF02687 FtsX-like permease family 553 641 8.0E-11 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM460_RS21895 c64c5cd3b017f8ddbdbc97654fe7213d 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 1.1E-40 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM460_RS21895 c64c5cd3b017f8ddbdbc97654fe7213d 648 SMART SM00382 33 220 1.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21895 c64c5cd3b017f8ddbdbc97654fe7213d 648 Gene3D G3DSA:3.40.50.300 1 248 2.0E-66 T 29-03-2018 AM460_RS07260 da89535fcc37ea69c1a9f736e4b9291c 309 SUPERFAMILY SSF53850 90 292 3.26E-39 T 29-03-2018 AM460_RS07260 da89535fcc37ea69c1a9f736e4b9291c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS07260 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:3.40.190.10 176 261 3.8E-18 T 29-03-2018 AM460_RS07260 da89535fcc37ea69c1a9f736e4b9291c 309 SUPERFAMILY SSF46785 4 108 5.17E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07260 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:1.10.10.10 3 84 4.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07260 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:3.40.190.10 89 175 6.8E-14 T 29-03-2018 AM460_RS07260 da89535fcc37ea69c1a9f736e4b9291c 309 Pfam PF03466 LysR substrate binding domain 90 290 8.3E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 Pfam PF07729 FCD domain 99 226 2.3E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 Gene3D G3DSA:1.10.10.10 2 76 5.2E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 SUPERFAMILY SSF48008 95 234 3.4E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 SMART SM00345 15 74 3.0E-29 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 SMART SM00895 99 227 9.2E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 Gene3D G3DSA:1.20.120.530 79 245 4.2E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS25780 46a9878e5f5f0a1f25c26a908baa14ab 254 SUPERFAMILY SSF46785 6 76 4.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00240 6eef54ecdddc93454ca423820135118a 157 Pfam PF07484 Phage Tail Collar Domain 10 57 4.8E-15 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS00240 6eef54ecdddc93454ca423820135118a 157 SUPERFAMILY SSF88874 4 156 1.96E-42 T 29-03-2018 AM460_RS00240 6eef54ecdddc93454ca423820135118a 157 Gene3D G3DSA:4.10.1070.10 53 149 3.1E-19 T 29-03-2018 AM460_RS00240 6eef54ecdddc93454ca423820135118a 157 Gene3D G3DSA:3.90.1340.10 1 52 1.1E-20 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 SUPERFAMILY SSF52540 330 572 9.73E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 Gene3D G3DSA:3.40.50.300 324 577 1.9E-68 T 29-03-2018 AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 SMART SM00382 361 547 1.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 Pfam PF00664 ABC transporter transmembrane region 22 291 8.6E-36 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 SUPERFAMILY SSF90123 7 323 6.41E-71 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 Pfam PF00005 ABC transporter 352 500 1.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS24125 fef2742867aee066d1ba8a4fb6359fab 590 Gene3D G3DSA:1.20.1560.10 1 323 1.3E-56 T 29-03-2018 AM460_RS10525 29a22b22fb115a631fed44b7147e2596 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.829 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM460_RS10525 29a22b22fb115a631fed44b7147e2596 159 SUPERFAMILY SSF69765 1 156 1.57E-66 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM460_RS10525 29a22b22fb115a631fed44b7147e2596 159 Pfam PF02542 YgbB family 1 154 1.8E-66 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM460_RS10525 29a22b22fb115a631fed44b7147e2596 159 Gene3D G3DSA:3.30.1330.50 1 158 2.9E-73 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM460_RS10525 29a22b22fb115a631fed44b7147e2596 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 4.6E-72 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM460_RS10525 29a22b22fb115a631fed44b7147e2596 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 29-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM460_RS06950 4363326f335edc2987d8e609b33aa633 127 SUPERFAMILY SSF64263 1 118 3.4E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06950 4363326f335edc2987d8e609b33aa633 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06950 4363326f335edc2987d8e609b33aa633 127 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-34 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06950 4363326f335edc2987d8e609b33aa633 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06950 4363326f335edc2987d8e609b33aa633 127 Gene3D G3DSA:3.90.1030.10 1 117 3.1E-50 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06950 4363326f335edc2987d8e609b33aa633 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.7E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 1.9E-39 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 Gene3D G3DSA:3.40.47.10 262 406 2.5E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 SUPERFAMILY SSF53901 1 253 5.76E-64 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 1.0E-29 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 SMART SM00825 Beta-ketoacyl synthase 4 406 7.9E-13 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 Gene3D G3DSA:3.40.47.10 4 259 5.0E-53 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS12720 d6474761a2d8f2787d17c08775c8d77c 406 SUPERFAMILY SSF53901 215 403 1.52E-60 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 7.6E-101 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 SUPERFAMILY SSF51569 1 283 1.76E-95 T 29-03-2018 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 7.7E-96 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 2.6E-144 T 29-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 PIRSF PIRSF001359 1 284 6.1E-109 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07160 af63bbe245cd2825559ee9a9aed1c787 284 Gene3D G3DSA:3.20.20.70 1 284 1.2E-100 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 2.1E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 2.1E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 2.1E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 308 322 2.1E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 2.1E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 Gene3D G3DSA:3.20.20.80 5 479 1.5E-155 T 29-03-2018 AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 SUPERFAMILY SSF51445 4 472 1.45E-167 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS09675 7a96badc03d218a6e7355bc0a7e38abb 479 Pfam PF00232 Glycosyl hydrolase family 1 7 476 8.6E-132 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM460_RS20720 c225940f952b785aedb213a2047398d7 152 PIRSF PIRSF006614 8 151 2.0E-66 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM460_RS20720 c225940f952b785aedb213a2047398d7 152 Pfam PF02142 MGS-like domain 26 118 2.8E-18 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS20720 c225940f952b785aedb213a2047398d7 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 41.132 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM460_RS20720 c225940f952b785aedb213a2047398d7 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 29-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM460_RS20720 c225940f952b785aedb213a2047398d7 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 2.0E-74 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM460_RS20720 c225940f952b785aedb213a2047398d7 152 SUPERFAMILY SSF52335 2 147 8.24E-59 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS20720 c225940f952b785aedb213a2047398d7 152 SMART SM00851 25 118 6.7E-24 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS20720 c225940f952b785aedb213a2047398d7 152 Gene3D G3DSA:3.40.50.1380 1 152 8.5E-45 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS17295 20c76e08cdcc0a97b66587fcfbd4b629 396 SUPERFAMILY SSF103473 5 386 1.31E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17295 20c76e08cdcc0a97b66587fcfbd4b629 396 Pfam PF07690 Major Facilitator Superfamily 19 348 1.2E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS17295 20c76e08cdcc0a97b66587fcfbd4b629 396 Gene3D G3DSA:1.20.1250.20 199 396 5.8E-18 T 29-03-2018 AM460_RS17295 20c76e08cdcc0a97b66587fcfbd4b629 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.968 T 29-03-2018 IPR023495 Sugar efflux transporter, putative AM460_RS17295 20c76e08cdcc0a97b66587fcfbd4b629 396 Gene3D G3DSA:1.20.1250.20 2 198 2.3E-25 T 29-03-2018 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 SUPERFAMILY SSF55874 433 535 5.5E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 SUPERFAMILY SSF55890 338 465 1.57E-16 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 1.3E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.3E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.3E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 1.3E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 SUPERFAMILY SSF103190 46 179 4.71E-41 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 SMART SM00387 430 538 1.8E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Pfam PF00989 PAS fold 222 323 4.5E-14 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Gene3D G3DSA:3.30.565.10 395 543 5.9E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Gene3D G3DSA:3.30.450.20 40 181 4.1E-28 T 29-03-2018 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Gene3D G3DSA:1.10.287.130 331 386 5.4E-15 T 29-03-2018 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Pfam PF17203 Single cache domain 3 47 179 2.0E-22 T 29-03-2018 IPR033463 Single cache domain 3 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 535 3.8E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 332 384 1.5E-10 T 29-03-2018 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 Gene3D G3DSA:3.30.450.20 216 330 5.3E-14 T 29-03-2018 AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 SUPERFAMILY SSF55785 222 323 7.04E-7 T 29-03-2018 IPR000014 PAS domain AM460_RS02190 56fbe3e225e2d63b2e4141bd75035ea8 543 SMART SM00091 222 288 7.4E-6 T 29-03-2018 IPR000014 PAS domain AM460_RS03340 41885b05530325e8f45cb8ae67bb2a19 367 Gene3D G3DSA:3.40.50.1970 3 159 1.3E-29 T 29-03-2018 AM460_RS03340 41885b05530325e8f45cb8ae67bb2a19 367 SUPERFAMILY SSF56796 3 355 1.96E-88 T 29-03-2018 AM460_RS03340 41885b05530325e8f45cb8ae67bb2a19 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS03340 41885b05530325e8f45cb8ae67bb2a19 367 PIRSF PIRSF000112 1 360 6.7E-99 T 29-03-2018 AM460_RS03340 41885b05530325e8f45cb8ae67bb2a19 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 6.7E-64 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS03340 41885b05530325e8f45cb8ae67bb2a19 367 Gene3D G3DSA:1.20.1090.10 160 363 1.7E-41 T 29-03-2018 AM460_RS03340 41885b05530325e8f45cb8ae67bb2a19 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS20765 94fda63b3800dec36b77a8b565243d89 586 Pfam PF13654 AAA domain 140 298 9.7E-20 T 29-03-2018 AM460_RS20765 94fda63b3800dec36b77a8b565243d89 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 462 481 1.6E-9 T 29-03-2018 AM460_RS20765 94fda63b3800dec36b77a8b565243d89 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 432 451 1.6E-9 T 29-03-2018 AM460_RS20765 94fda63b3800dec36b77a8b565243d89 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 1.6E-9 T 29-03-2018 AM460_RS20765 94fda63b3800dec36b77a8b565243d89 586 Gene3D G3DSA:3.30.230.10 326 568 1.1E-29 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS20765 94fda63b3800dec36b77a8b565243d89 586 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 538 5.7E-10 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM460_RS20765 94fda63b3800dec36b77a8b565243d89 586 SUPERFAMILY SSF54211 349 540 2.54E-33 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS19090 513ac3e272b8c8474b49a034f022468d 284 Pfam PF00665 Integrase core domain 124 237 1.6E-31 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS19090 513ac3e272b8c8474b49a034f022468d 284 Pfam PF13276 HTH-like domain 43 96 4.1E-14 T 29-03-2018 IPR025948 HTH-like domain AM460_RS19090 513ac3e272b8c8474b49a034f022468d 284 Gene3D G3DSA:3.30.420.10 114 283 5.0E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS19090 513ac3e272b8c8474b49a034f022468d 284 SUPERFAMILY SSF53098 117 280 4.05E-41 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS20355 69322bc3b27a5eeab049bf1fd120170d 110 Pfam PF10610 Thin aggregative fimbriae synthesis protein 6 103 3.5E-50 T 29-03-2018 IPR014491 Curli production protein CsgC AM460_RS20355 69322bc3b27a5eeab049bf1fd120170d 110 PIRSF PIRSF018100 1 110 2.1E-70 T 29-03-2018 IPR014491 Curli production protein CsgC AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.30.10 187 300 3.5E-22 T 29-03-2018 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 9.7E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF52540 3 219 1.38E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.870 302 400 1.3E-32 T 29-03-2018 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.240 401 481 5.3E-19 T 29-03-2018 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.40.50.300 2 67 1.1E-10 T 29-03-2018 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 398 512 2.16E-26 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.40.50.300 68 186 6.0E-30 T 29-03-2018 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF50447 151 299 4.64E-34 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS03730 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.7E-294 T 29-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Pfam PF00679 Elongation factor G C-terminus 397 477 4.5E-22 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM460_RS03730 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 2.2E-25 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 302 387 1.69E-15 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.50.250 483 573 3.3E-38 T 29-03-2018 AM460_RS03730 82f33c2557715805d8af5a024061e004 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS03730 82f33c2557715805d8af5a024061e004 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 7.2E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 SUPERFAMILY SSF53067 256 498 1.73E-87 T 29-03-2018 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 Gene3D G3DSA:3.30.420.40 1 249 3.9E-89 T 29-03-2018 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 PIRSF PIRSF000538 4 502 1.2E-178 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.5E-62 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 Gene3D G3DSA:3.30.420.40 250 502 1.7E-80 T 29-03-2018 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 1.6E-231 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.3E-96 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.281 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM460_RS03445 dd2a262276328560c48ff42a0be1c516 502 SUPERFAMILY SSF53067 5 256 1.21E-96 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 ProSitePatterns PS01047 Heavy-metal-associated domain. 54 83 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 639 8.2E-36 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 436 442 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 183 730 7.2E-164 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 183 728 4.1E-181 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 1.4E-5 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 599 615 1.4E-5 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 1.4E-5 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 Gene3D G3DSA:3.30.70.100 46 118 9.0E-18 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 SUPERFAMILY SSF81653 236 333 8.89E-21 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 4.3E-28 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 283 297 4.3E-28 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 4.3E-28 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 4.3E-28 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 4.3E-28 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 4.3E-28 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 SUPERFAMILY SSF56784 491 726 1.3E-50 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 SUPERFAMILY SSF56784 433 452 1.3E-50 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 Gene3D G3DSA:3.40.50.1000 555 693 1.6E-36 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 Gene3D G3DSA:3.40.1110.10 449 554 1.6E-26 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 Pfam PF00122 E1-E2 ATPase 234 414 1.1E-46 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 Gene3D G3DSA:1.20.1110.10 126 448 2.5E-29 T 29-03-2018 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 SUPERFAMILY SSF55008 49 111 2.88E-16 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 Pfam PF00403 Heavy-metal-associated domain 53 109 5.2E-12 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 705 2.3E-78 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 SUPERFAMILY SSF81665 675 714 2.09E-17 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 SUPERFAMILY SSF81665 334 428 2.09E-17 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS06055 baf9596ada3dec9207d51eec654520d4 732 SUPERFAMILY SSF81665 186 237 2.09E-17 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS05355 bd79829fc07f75005e9b5076f66e49f0 328 SUPERFAMILY SSF53850 134 263 2.53E-5 T 29-03-2018 AM460_RS05355 bd79829fc07f75005e9b5076f66e49f0 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 286 4.8E-111 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM460_RS05355 bd79829fc07f75005e9b5076f66e49f0 328 PIRSF PIRSF006470 1 328 3.2E-102 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM460_RS05355 bd79829fc07f75005e9b5076f66e49f0 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 312 1.0E-104 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 3.1E-142 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 Gene3D G3DSA:3.90.190.20 304 451 2.2E-40 T 29-03-2018 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 394 3.6E-15 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 Gene3D G3DSA:3.40.1190.10 90 303 4.0E-58 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 Pfam PF08245 Mur ligase middle domain 106 292 4.6E-52 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 Pfam PF01225 Mur ligase family, catalytic domain 26 80 3.1E-9 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.697 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 SUPERFAMILY SSF53623 100 310 1.44E-59 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 SUPERFAMILY SSF53244 313 446 2.98E-38 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 Gene3D G3DSA:3.40.1390.10 1 89 5.1E-28 T 29-03-2018 AM460_RS25950 414985ac4fc903f508e2e685d809e6ba 452 SUPERFAMILY SSF63418 1 97 1.31E-28 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 8.7E-31 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 6.5E-30 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 2.0E-24 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 SUPERFAMILY SSF101386 115 202 4.14E-23 T 29-03-2018 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 202 5.4E-17 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 SUPERFAMILY SSF141734 6 122 1.09E-46 T 29-03-2018 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 17.903 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 Gene3D G3DSA:1.10.287.1080 111 203 2.0E-19 T 29-03-2018 AM460_RS14145 7fe06cd76fa4c447b962d5da1de55702 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.898 T 29-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 51.403 T 29-03-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 Pfam PF00255 Glutathione peroxidase 6 111 2.1E-47 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.3E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 1.3E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.3E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 Gene3D G3DSA:3.40.30.10 4 183 1.5E-44 T 29-03-2018 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 SUPERFAMILY SSF52833 6 182 3.92E-54 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 29-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AM460_RS16475 8387e4d6f973d26cfe25cedc08bdb540 183 PIRSF PIRSF000303 1 183 3.7E-64 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 Pfam PF07549 SecD/SecF GG Motif 120 140 6.1E-6 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.1E-37 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 Pfam PF02355 Protein export membrane protein 433 601 2.0E-15 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 2.4E-151 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 SUPERFAMILY SSF82866 410 606 2.35E-40 T 29-03-2018 AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 SUPERFAMILY SSF82866 337 349 2.35E-40 T 29-03-2018 AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 Gene3D G3DSA:1.20.1640.10 383 609 7.7E-30 T 29-03-2018 AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 51.093 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM460_RS24330 be93a420e442caf6510839e8e8943f61 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 6.0E-84 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 SUPERFAMILY SSF52540 274 484 4.95E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 SUPERFAMILY SSF52540 6 233 2.46E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 Gene3D G3DSA:3.40.50.300 265 497 4.3E-34 T 29-03-2018 AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 Gene3D G3DSA:3.40.50.300 1 246 1.9E-52 T 29-03-2018 AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 Pfam PF00005 ABC transporter 275 427 1.4E-17 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 Pfam PF00005 ABC transporter 23 172 1.3E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 SMART SM00382 32 220 2.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS15485 7e3c142a099253053ed1af7e0c9e2445 504 SMART SM00382 281 476 1.6E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 319 4.4E-59 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 Gene3D G3DSA:3.30.70.20 319 410 6.9E-15 T 29-03-2018 AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 Pfam PF01180 Dihydroorotate dehydrogenase 6 304 1.3E-33 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 Gene3D G3DSA:3.20.20.70 2 318 1.6E-46 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 SUPERFAMILY SSF51395 4 320 5.66E-69 T 29-03-2018 AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 Pfam PF14697 4Fe-4S dicluster domain 338 394 7.8E-17 T 29-03-2018 AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS13630 2a3d3b2a01a5a09a56dbeb7faaa709d5 411 SUPERFAMILY SSF54862 310 400 6.51E-21 T 29-03-2018 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 Gene3D G3DSA:3.30.70.580 63 150 7.6E-17 T 29-03-2018 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 SUPERFAMILY SSF55174 5 98 5.59E-14 T 29-03-2018 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 Gene3D G3DSA:3.30.70.1560 151 219 2.4E-21 T 29-03-2018 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.2E-15 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 Gene3D G3DSA:3.10.290.10 1 61 5.4E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 Pfam PF01479 S4 domain 4 43 4.7E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 SMART SM00363 3 74 5.0E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 SUPERFAMILY SSF55120 69 234 9.87E-43 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS18330 65f1ab745d448bfe7095d94a43a08a48 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 3.4E-64 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM460_RS03760 626ce06e5782c5a112063f41a7a96964 457 Pfam PF06969 HemN C-terminal domain 363 431 4.1E-8 T 29-03-2018 IPR010723 HemN, C-terminal AM460_RS03760 626ce06e5782c5a112063f41a7a96964 457 SUPERFAMILY SSF102114 6 444 2.75E-148 T 29-03-2018 AM460_RS03760 626ce06e5782c5a112063f41a7a96964 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 6.4E-243 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM460_RS03760 626ce06e5782c5a112063f41a7a96964 457 SMART SM00729 52 272 1.3E-58 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS03760 626ce06e5782c5a112063f41a7a96964 457 PIRSF PIRSF000167 3 454 1.1E-182 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM460_RS03760 626ce06e5782c5a112063f41a7a96964 457 Gene3D G3DSA:3.20.20.70 37 353 3.9E-49 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03760 626ce06e5782c5a112063f41a7a96964 457 Pfam PF04055 Radical SAM superfamily 57 226 5.1E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 Gene3D G3DSA:1.10.260.40 2 56 1.1E-17 T 29-03-2018 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.0E-17 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 SUPERFAMILY SSF53822 76 326 3.14E-39 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 SUPERFAMILY SSF47413 3 51 7.13E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 SMART SM00354 1 74 9.6E-24 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 Gene3D G3DSA:3.40.50.2300 57 174 3.6E-9 T 29-03-2018 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 Gene3D G3DSA:3.40.50.2300 175 309 4.2E-29 T 29-03-2018 AM460_RS08075 9fd5116c64c1b5e19fa15e9a95148285 327 Pfam PF13377 Periplasmic binding protein-like domain 168 326 4.2E-30 T 29-03-2018 AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 29-03-2018 IPR013105 Tetratricopeptide repeat 2 AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 SMART SM00028 96 129 2.0E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 SMART SM00028 62 95 0.0033 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 SMART SM00028 234 267 17.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 PIRSF PIRSF004654 1 292 1.6E-122 T 29-03-2018 IPR023605 Lipoprotein NlpI AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 Gene3D G3DSA:1.25.40.10 20 294 1.3E-51 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS07640 2ce92cf2f06fc5a6d101faab7303c360 294 SUPERFAMILY SSF48452 27 283 1.57E-78 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS10750 6d7a1a30d35a3a8afdfdfa3675cf0164 123 SUPERFAMILY SSF141530 4 119 7.98E-38 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS10750 6d7a1a30d35a3a8afdfdfa3675cf0164 123 Gene3D G3DSA:2.40.33.40 3 118 1.0E-39 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS10750 6d7a1a30d35a3a8afdfdfa3675cf0164 123 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 3.0E-61 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS10750 6d7a1a30d35a3a8afdfdfa3675cf0164 123 TIGRFAM TIGR00849 gutA: PTS system, glucitol/sorbitol-specific IIA component 1 123 1.9E-59 T 29-03-2018 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS10750 6d7a1a30d35a3a8afdfdfa3675cf0164 123 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 9.0E-39 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 1.6E-148 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 29-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 PIRSF PIRSF002401 1 376 3.2E-140 T 29-03-2018 IPR035101 GTP-binding protein, Obg-type AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 7.1E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 SUPERFAMILY SSF82051 2 157 1.12E-56 T 29-03-2018 IPR006169 GTP1/OBG domain AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 Gene3D G3DSA:2.70.210.12 2 156 4.7E-58 T 29-03-2018 IPR006169 GTP1/OBG domain AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 Gene3D G3DSA:3.40.50.300 159 377 1.1E-33 T 29-03-2018 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.475 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 Pfam PF01018 GTP1/OBG 4 157 8.8E-59 T 29-03-2018 IPR006169 GTP1/OBG domain AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 SUPERFAMILY SSF52540 161 350 3.2E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS07535 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 308 319 1.0E-26 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 96 117 1.0E-26 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 264 279 1.0E-26 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 123 142 1.0E-26 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 196 209 1.0E-26 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 337 350 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 Gene3D G3DSA:1.10.10.10 1 57 6.0E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 SUPERFAMILY SSF53613 94 381 1.15E-75 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 Pfam PF08220 DeoR-like helix-turn-helix domain 5 55 6.3E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 Hamap MF_01987 Ribokinase [rbsK]. 92 392 21.409 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 Pfam PF00294 pfkB family carbohydrate kinase 92 381 1.1E-64 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.1E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.1E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 Gene3D G3DSA:3.40.1190.20 90 402 1.6E-72 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 SMART SM00420 5 57 5.4E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS14530 b1c7658ecb2d3e08ddf38781a32be321 404 SUPERFAMILY SSF46785 4 58 9.46E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08755 79c2d301a624fc057d9d8eb895cb48fe 1103 Gene3D G3DSA:3.40.50.1000 482 649 5.4E-9 T 29-03-2018 IPR023214 HAD-like domain AM460_RS08755 79c2d301a624fc057d9d8eb895cb48fe 1103 SUPERFAMILY SSF56784 407 619 6.31E-9 T 29-03-2018 IPR023214 HAD-like domain AM460_RS23870 2e00cf992cec98e5fd3ecf86325ab828 225 Gene3D G3DSA:3.40.50.300 4 222 1.8E-57 T 29-03-2018 AM460_RS23870 2e00cf992cec98e5fd3ecf86325ab828 225 SMART SM00382 32 213 6.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS23870 2e00cf992cec98e5fd3ecf86325ab828 225 SUPERFAMILY SSF52540 5 211 6.29E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23870 2e00cf992cec98e5fd3ecf86325ab828 225 Pfam PF00005 ABC transporter 23 166 2.5E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS23870 2e00cf992cec98e5fd3ecf86325ab828 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS12820 0a8de6e41bf468ce0b34800c6cf2f053 120 Gene3D G3DSA:3.30.1130.10 1 120 4.3E-30 T 29-03-2018 AM460_RS12820 0a8de6e41bf468ce0b34800c6cf2f053 120 SUPERFAMILY SSF55620 6 120 2.84E-31 T 29-03-2018 AM460_RS12820 0a8de6e41bf468ce0b34800c6cf2f053 120 TIGRFAM TIGR00526 folB_dom: FolB domain 6 120 2.0E-39 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM460_RS12820 0a8de6e41bf468ce0b34800c6cf2f053 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 4.6E-25 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM460_RS12820 0a8de6e41bf468ce0b34800c6cf2f053 120 SMART SM00905 8 118 1.1E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 Pfam PF00501 AMP-binding enzyme 29 460 6.9E-114 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 SUPERFAMILY SSF56801 14 555 9.81E-155 T 29-03-2018 AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:3.30.300.30 454 559 2.2E-27 T 29-03-2018 AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:3.40.50.980 217 371 5.9E-38 T 29-03-2018 AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:3.40.50.980 20 216 3.3E-44 T 29-03-2018 AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 5.1E-18 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:2.30.38.10 372 453 1.9E-29 T 29-03-2018 AM460_RS15980 d207538cafe2e2d03a7a8f3bb3e8705a 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 272 1.7E-97 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 3.7E-25 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 Gene3D G3DSA:3.40.50.1860 144 268 5.4E-27 T 29-03-2018 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.662 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 SUPERFAMILY SSF53681 24 125 1.24E-30 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 SUPERFAMILY SSF53681 127 279 4.58E-33 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS03225 d94be26fea642c09cd6d5b8bf70accc9 285 Gene3D G3DSA:3.40.50.1860 20 143 6.9E-26 T 29-03-2018 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 153 1.3E-55 T 29-03-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 8.7E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 8.7E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 8.7E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 8.7E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 68 84 8.7E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 SUPERFAMILY SSF53163 1 159 3.92E-46 T 29-03-2018 IPR023430 Peptidase HybD-like domain AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 Pfam PF01750 Hydrogenase maturation protease 20 147 1.3E-37 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 4.4E-46 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS08590 c968778514b438e3e79b7d44c0fca2af 164 Gene3D G3DSA:3.40.50.1450 1 162 2.2E-55 T 29-03-2018 IPR023430 Peptidase HybD-like domain AM460_RS02890 01b6434bb8b2a85cd6add6e36a9b1b47 315 Gene3D G3DSA:3.40.50.1360 53 315 6.9E-35 T 29-03-2018 AM460_RS02890 01b6434bb8b2a85cd6add6e36a9b1b47 315 SUPERFAMILY SSF100950 62 315 9.21E-65 T 29-03-2018 AM460_RS02890 01b6434bb8b2a85cd6add6e36a9b1b47 315 Pfam PF13936 Helix-turn-helix domain 12 45 1.5E-8 T 29-03-2018 IPR025246 Transposase IS30-like HTH domain AM460_RS02890 01b6434bb8b2a85cd6add6e36a9b1b47 315 Pfam PF04198 Putative sugar-binding domain 59 315 4.2E-77 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AM460_RS02890 01b6434bb8b2a85cd6add6e36a9b1b47 315 SUPERFAMILY SSF46689 7 53 2.87E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS02890 01b6434bb8b2a85cd6add6e36a9b1b47 315 Gene3D G3DSA:1.10.10.60 1 52 2.0E-20 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 Pfam PF00890 FAD binding domain 7 397 1.3E-115 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:3.50.50.60 2 201 1.9E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:3.90.700.10 235 338 1.8E-30 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 3.0E-10 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.0E-10 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:3.50.50.60 339 415 2.0E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 29-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF46977 444 590 2.75E-46 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 PIRSF PIRSF000171 1 576 3.7E-43 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:1.20.58.100 423 542 1.8E-29 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.7E-250 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF56425 227 358 6.88E-43 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 5.7E-39 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:4.10.80.40 543 576 2.1E-13 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.5E-5 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-5 T 29-03-2018 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF51905 361 415 3.35E-71 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS01980 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF51905 3 250 3.35E-71 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS04945 a2b3336de09ad40a6529d7ed48322122 104 Gene3D G3DSA:3.40.50.2300 2 101 4.5E-36 T 29-03-2018 AM460_RS04945 a2b3336de09ad40a6529d7ed48322122 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 90 4.7E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS04945 a2b3336de09ad40a6529d7ed48322122 104 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 1.9E-29 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM460_RS04945 a2b3336de09ad40a6529d7ed48322122 104 SUPERFAMILY SSF52794 2 99 1.06E-32 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 SUPERFAMILY SSF55945 2 97 2.35E-29 T 29-03-2018 AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 SMART SM00478 130 276 4.9E-31 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 SUPERFAMILY SSF48150 102 274 3.14E-48 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 29-03-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 Gene3D G3DSA:3.30.310.20 1 102 2.3E-28 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 Pfam PF06029 AlkA N-terminal domain 3 112 1.4E-28 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 SMART SM01009 1 112 1.4E-48 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 Gene3D G3DSA:1.10.1670.10 242 280 4.4E-13 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 Gene3D G3DSA:1.10.340.30 103 241 1.1E-25 T 29-03-2018 AM460_RS14025 9ea7dad12f01d33be633b375f397fd64 282 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 240 5.9E-9 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM460_RS00660 fa1465748018ce53ab77f65589a7b94e 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 88 1.3E-25 T 29-03-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 SUPERFAMILY SSF53623 95 297 4.84E-58 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 SUPERFAMILY SSF53244 299 437 1.21E-54 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 Gene3D G3DSA:3.40.1190.10 95 299 1.7E-61 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 35.2 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 Gene3D G3DSA:3.40.50.720 1 94 6.7E-14 T 29-03-2018 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 5.6E-131 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 Gene3D G3DSA:3.90.190.20 300 434 9.8E-37 T 29-03-2018 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 373 4.5E-10 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 Pfam PF08245 Mur ligase middle domain 110 280 4.9E-29 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25940 094138162ece686de2c5c7850e5a0d12 438 SUPERFAMILY SSF51984 3 94 7.98E-25 T 29-03-2018 AM460_RS02525 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 SUPERFAMILY SSF48695 38 472 2.4E-163 T 29-03-2018 IPR011031 Multihaem cytochrome AM460_RS02525 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Gene3D G3DSA:1.10.1130.10 41 343 2.0E-78 T 29-03-2018 AM460_RS02525 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 PIRSF PIRSF000243 22 478 1.1E-126 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AM460_RS02525 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 477 59.288 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AM460_RS02525 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Pfam PF02335 Cytochrome c552 43 472 4.0E-177 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AM460_RS02525 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 38 475 3.8E-249 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AM460_RS22480 5489da309f15c2199347af15a87e0978 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.3E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS22480 5489da309f15c2199347af15a87e0978 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS22480 5489da309f15c2199347af15a87e0978 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS22480 5489da309f15c2199347af15a87e0978 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS22480 5489da309f15c2199347af15a87e0978 317 Gene3D G3DSA:3.40.190.10 91 181 7.3E-21 T 29-03-2018 AM460_RS22480 5489da309f15c2199347af15a87e0978 317 SUPERFAMILY SSF46785 4 112 3.82E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22480 5489da309f15c2199347af15a87e0978 317 Gene3D G3DSA:1.10.10.10 2 85 7.6E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22480 5489da309f15c2199347af15a87e0978 317 Pfam PF03466 LysR substrate binding domain 91 291 3.9E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS22480 5489da309f15c2199347af15a87e0978 317 SUPERFAMILY SSF53850 92 296 9.96E-42 T 29-03-2018 AM460_RS22480 5489da309f15c2199347af15a87e0978 317 Gene3D G3DSA:3.40.190.10 182 263 1.6E-17 T 29-03-2018 AM460_RS14140 8e3aa1731d3ad9c3638a94d0c3c6e02c 325 SUPERFAMILY SSF160355 54 292 4.58E-70 T 29-03-2018 AM460_RS14140 8e3aa1731d3ad9c3638a94d0c3c6e02c 325 Pfam PF02706 Chain length determinant protein 16 121 3.1E-22 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM460_RS14140 8e3aa1731d3ad9c3638a94d0c3c6e02c 325 Gene3D G3DSA:3.30.1890.10 224 294 2.6E-9 T 29-03-2018 AM460_RS14140 8e3aa1731d3ad9c3638a94d0c3c6e02c 325 Gene3D G3DSA:3.30.1890.10 52 223 3.4E-39 T 29-03-2018 AM460_RS22005 1029734d80e4847c35447b93c696d7da 375 SUPERFAMILY SSF53335 3 374 1.89E-55 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS22005 1029734d80e4847c35447b93c696d7da 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 4.1E-222 T 29-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM460_RS22005 1029734d80e4847c35447b93c696d7da 375 Gene3D G3DSA:3.40.50.150 1 373 9.5E-44 T 29-03-2018 AM460_RS22005 1029734d80e4847c35447b93c696d7da 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM460_RS22005 1029734d80e4847c35447b93c696d7da 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 80.156 T 29-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM460_RS22005 1029734d80e4847c35447b93c696d7da 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 207 374 2.2E-16 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM460_RS22005 1029734d80e4847c35447b93c696d7da 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 Gene3D G3DSA:3.40.220.10 1 157 9.4E-31 T 29-03-2018 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 SUPERFAMILY SSF52949 1 184 5.89E-52 T 29-03-2018 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 1.1E-124 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 Gene3D G3DSA:3.40.630.10 170 500 1.3E-135 T 29-03-2018 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.561 T 29-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.0E-33 T 29-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM460_RS01400 265d817054fc93eac46c9c4d888ed0e2 503 SUPERFAMILY SSF53187 180 496 5.65E-126 T 29-03-2018 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 Gene3D G3DSA:3.40.50.150 11 349 4.1E-58 T 29-03-2018 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 Pfam PF01555 DNA methylase 29 340 5.1E-43 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 283 300 5.9E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 302 320 5.9E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 63 83 5.9E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 325 345 5.9E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 5.9E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 SUPERFAMILY SSF53335 9 189 1.15E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS18640 95d1c51785391966a316f326500b0dc0 349 SUPERFAMILY SSF53335 267 345 1.15E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 Gene3D G3DSA:3.90.1150.10 289 469 5.1E-68 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 Gene3D G3DSA:3.90.1150.10 20 112 3.1E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 Pfam PF01212 Beta-eliminating lyase 49 437 2.0E-89 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 PIRSF PIRSF001386 3 471 1.1E-201 T 29-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 0.0 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 29-03-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 102.026 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AM460_RS04655 553e1c2167237e9ddfd4d8843d8cbae8 471 SUPERFAMILY SSF53383 6 471 3.63E-128 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS06540 1e11ef72011f96bc70cbc16ae9f712a8 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 4.2E-49 T 29-03-2018 IPR021238 Protein of unknown function DUF2620 AM460_RS25405 46caa69780821a1c8b8b3d0bd5790569 151 Gene3D G3DSA:3.10.129.10 1 149 6.3E-56 T 29-03-2018 AM460_RS25405 46caa69780821a1c8b8b3d0bd5790569 151 SUPERFAMILY SSF54637 10 149 1.13E-50 T 29-03-2018 IPR029069 HotDog domain AM460_RS25405 46caa69780821a1c8b8b3d0bd5790569 151 Pfam PF07977 FabA-like domain 17 141 1.9E-40 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS25405 46caa69780821a1c8b8b3d0bd5790569 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.4E-60 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS25405 46caa69780821a1c8b8b3d0bd5790569 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.519 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.1E-49 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 SUPERFAMILY SSF55424 345 463 1.05E-30 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 SUPERFAMILY SSF51905 2 335 2.75E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.4E-25 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 9.4E-25 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 9.4E-25 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 9.4E-25 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 9.4E-25 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 Gene3D G3DSA:3.50.50.60 3 164 1.6E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 Gene3D G3DSA:3.30.390.30 339 463 6.2E-34 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 Gene3D G3DSA:3.40.50.720 169 338 6.2E-29 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.5E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 PIRSF PIRSF000350 2 463 8.0E-70 T 29-03-2018 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 2.5E-30 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM460_RS03260 b41e72a4c433caa23623d4acc83b24c6 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 70.383 T 29-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AM460_RS04565 0fceb66032463934ef52dd74861c7cb4 296 Gene3D G3DSA:1.10.3720.10 15 287 4.1E-37 T 29-03-2018 AM460_RS04565 0fceb66032463934ef52dd74861c7cb4 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 3.5E-86 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AM460_RS04565 0fceb66032463934ef52dd74861c7cb4 296 SUPERFAMILY SSF161098 35 286 5.23E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS04565 0fceb66032463934ef52dd74861c7cb4 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 4.0E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18605 045f482b4179612de5a39dfcf87b5bcc 71 PIRSF PIRSF030786 1 71 1.3E-47 T 29-03-2018 IPR007054 Lysis protein S GO:0019835 AM460_RS18605 045f482b4179612de5a39dfcf87b5bcc 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 6.2E-42 T 29-03-2018 IPR007054 Lysis protein S GO:0019835 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 SUPERFAMILY SSF103263 4 354 2.22E-149 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.1E-140 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.971 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 Gene3D G3DSA:3.60.150.10 3 359 1.5E-162 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 PIRSF PIRSF001456 3 359 2.1E-142 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS12690 701ee59d35210fded1e816b34df5851b 361 Pfam PF01264 Chorismate synthase 10 345 2.2E-143 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.4E-37 T 29-03-2018 IPR024757 Cell division protein FtsZ, C-terminal AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.40.50.1440 8 213 7.1E-43 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 29-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.188 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 SMART SM00865 206 324 3.4E-56 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 SMART SM00864 12 204 3.3E-111 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF52490 12 207 1.7E-69 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 4.4E-42 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 4.5E-142 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM460_RS25905 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.30.1330.20 214 324 1.0E-44 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AM460_RS15900 48ceeff369173479995acd1316efe884 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 3.0E-150 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM460_RS15900 48ceeff369173479995acd1316efe884 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 2.6E-111 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM460_RS22475 03b7bff065515b86e5c38cd6729de0b6 350 Pfam PF04303 PrpF protein 1 350 9.5E-162 T 29-03-2018 IPR007400 PrpF protein AM460_RS22475 03b7bff065515b86e5c38cd6729de0b6 350 SUPERFAMILY SSF54506 2 167 2.62E-63 T 29-03-2018 AM460_RS22475 03b7bff065515b86e5c38cd6729de0b6 350 Gene3D G3DSA:3.10.310.10 1 174 8.0E-73 T 29-03-2018 AM460_RS22475 03b7bff065515b86e5c38cd6729de0b6 350 SUPERFAMILY SSF54506 170 350 7.32E-58 T 29-03-2018 AM460_RS22475 03b7bff065515b86e5c38cd6729de0b6 350 Gene3D G3DSA:3.10.310.10 175 333 9.5E-53 T 29-03-2018 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 SUPERFAMILY SSF53743 2 355 1.7E-155 T 29-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 Gene3D G3DSA:3.20.14.10 341 589 7.6E-119 T 29-03-2018 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 SUPERFAMILY SSF50443 356 590 7.59E-129 T 29-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 5.7E-84 T 29-03-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 Gene3D G3DSA:3.40.50.1070 5 175 8.4E-71 T 29-03-2018 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 Gene3D G3DSA:3.40.275.10 177 339 2.4E-62 T 29-03-2018 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 3.5E-55 T 29-03-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 29-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 72.054 T 29-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 AM460_RS10260 52e5f663a815cfbcbb304ed2a17543e3 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 4.5E-81 T 29-03-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 AM460_RS02055 179207912c2f168dcf60bd6cfee1425f 418 PIRSF PIRSF006060 1 412 2.7E-58 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS02055 179207912c2f168dcf60bd6cfee1425f 418 Pfam PF13520 Amino acid permease 8 370 3.2E-30 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 622 4.1E-212 T 29-03-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 148 433 6.9E-88 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 17 34 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 Gene3D G3DSA:3.30.1360.60 2 78 3.8E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 478 601 6.9E-46 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 26 106 3.1E-15 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 SUPERFAMILY SSF51261 475 621 5.76E-48 T 29-03-2018 IPR011055 Duplicated hybrid motif AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 540 552 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 Gene3D G3DSA:2.70.70.10 465 624 5.0E-53 T 29-03-2018 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 478 598 2.5E-44 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 Pfam PF00367 phosphotransferase system, EIIB 7 38 9.0E-15 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 SUPERFAMILY SSF55604 4 77 1.96E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS04585 425a9208273dec88de6d055a25e49be7 624 Pfam PF02378 Phosphotransferase system, EIIC 106 389 4.9E-29 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 SUPERFAMILY SSF52540 4 223 2.47E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 SUPERFAMILY SSF52540 259 488 1.68E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 Gene3D G3DSA:3.40.50.300 2 242 1.1E-52 T 29-03-2018 AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 Gene3D G3DSA:3.40.50.300 255 496 1.1E-33 T 29-03-2018 AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 SMART SM00382 282 476 1.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 SMART SM00382 30 218 1.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 Pfam PF00005 ABC transporter 21 170 5.3E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS07170 a2f0052c855d66932e89dfef4e5931e2 499 Pfam PF00005 ABC transporter 274 427 3.5E-19 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 Gene3D G3DSA:1.10.287.990 44 108 4.4E-21 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 471 3.7E-144 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PIRSF PIRSF000350 1 470 1.9E-69 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 SUPERFAMILY SSF55424 349 471 5.67E-34 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 Gene3D G3DSA:3.30.9.10 109 189 0.0048 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 6.5E-28 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 Gene3D G3DSA:3.40.50.720 5 42 0.0094 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 5.9E-72 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 Gene3D G3DSA:3.40.50.720 190 347 7.6E-28 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 Gene3D G3DSA:3.30.390.30 352 472 6.6E-34 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.5E-35 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-35 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.5E-35 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.5E-35 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.5E-35 T 29-03-2018 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 4.9E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS02675 c6bac66b5c393b39aef3cde26e842e9a 472 SUPERFAMILY SSF51905 2 342 6.62E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 1 98 4.2E-27 T 29-03-2018 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.9E-46 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS07125 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM460_RS02765 b6747ab0206639ab7b6b41fe8772a481 459 Pfam PF01554 MatE 259 412 1.3E-10 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS02765 b6747ab0206639ab7b6b41fe8772a481 459 Pfam PF01554 MatE 35 196 7.5E-35 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS02765 b6747ab0206639ab7b6b41fe8772a481 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 35 428 1.1E-103 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS21215 69ac12e33822ee6068da215e5fb8b7d5 198 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 109 1.2E-17 T 29-03-2018 IPR006531 Gp5 N-terminal AM460_RS21215 69ac12e33822ee6068da215e5fb8b7d5 198 Gene3D G3DSA:2.40.50.260 2 96 6.8E-5 T 29-03-2018 AM460_RS21215 69ac12e33822ee6068da215e5fb8b7d5 198 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 1 198 5.3E-39 T 29-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 SMART SM00847 388 476 1.7E-11 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 SUPERFAMILY SSF52540 12 431 4.87E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 5.6E-54 T 29-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 Gene3D G3DSA:3.40.50.300 3 162 3.8E-23 T 29-03-2018 AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 Pfam PF00271 Helicase conserved C-terminal domain 207 327 6.7E-11 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 808 0.0 T 29-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 Gene3D G3DSA:3.40.50.300 180 349 2.7E-43 T 29-03-2018 AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 SMART SM00490 226 328 2.4E-13 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 Pfam PF00270 DEAD/DEAH box helicase 12 163 3.1E-10 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 Pfam PF04408 Helicase associated domain (HA2) 389 444 7.4E-10 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 SMART SM00487 2 186 4.1E-21 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS25585 fedaba131a7e48a25fda17d4e5854929 809 PIRSF PIRSF005496 1 809 0.0 T 29-03-2018 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 PIRSF PIRSF006160 1 162 3.0E-66 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 Gene3D G3DSA:3.30.1360.80 3 161 9.4E-65 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 1.7E-62 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 5.0E-85 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 SUPERFAMILY SSF63411 4 162 2.38E-67 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS10840 03cb9b0c58ab382f20aeb9f032942f80 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 36.398 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 SUPERFAMILY SSF52833 3 112 8.69E-31 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF00085 Thioredoxin 6 108 1.7E-18 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:1.25.40.10 124 196 6.5E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.8E-28 T 29-03-2018 AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:1.25.40.10 201 277 5.4E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:3.40.30.10 1 123 5.1E-29 T 29-03-2018 AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 SUPERFAMILY SSF48452 118 239 4.24E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23860 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF14559 Tetratricopeptide repeat 124 190 1.1E-22 T 29-03-2018 AM460_RS25740 6b38f5ed43a61eea2ece7fb07abb5f4c 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 30.142 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM460_RS25740 6b38f5ed43a61eea2ece7fb07abb5f4c 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 3.5E-42 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM460_RS25740 6b38f5ed43a61eea2ece7fb07abb5f4c 120 PIRSF PIRSF006287 1 120 1.0E-49 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM460_RS25740 6b38f5ed43a61eea2ece7fb07abb5f4c 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 2.0E-63 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.40.50.740 620 790 3.1E-31 T 29-03-2018 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:2.40.40.20 1048 1238 1.4E-47 T 29-03-2018 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.40.228.10 225 618 2.3E-89 T 29-03-2018 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 6.3E-22 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.40.50.740 108 214 7.6E-5 T 29-03-2018 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 SUPERFAMILY SSF50692 1081 1235 1.7E-47 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 29-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.30.2070.10 795 835 5.5E-5 T 29-03-2018 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:4.10.1200.10 1 26 6.6E-15 T 29-03-2018 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 SMART SM00926 43 105 6.6E-8 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 8.2E-17 T 29-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 5.5E-197 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 SUPERFAMILY SSF53706 4 1074 0.0 T 29-03-2018 AM460_RS18950 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 29-03-2018 AM460_RS05050 a76987c37a122dbb4641f4d5c1679281 151 Gene3D G3DSA:2.70.40.10 2 115 1.4E-40 T 29-03-2018 AM460_RS05050 a76987c37a122dbb4641f4d5c1679281 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.516 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 AM460_RS05050 a76987c37a122dbb4641f4d5c1679281 151 Gene3D G3DSA:2.70.40.10 116 150 1.3E-15 T 29-03-2018 AM460_RS05050 a76987c37a122dbb4641f4d5c1679281 151 Pfam PF00692 dUTPase 16 149 3.6E-45 T 29-03-2018 IPR029054 dUTPase-like AM460_RS05050 a76987c37a122dbb4641f4d5c1679281 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 2.2E-50 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 AM460_RS05050 a76987c37a122dbb4641f4d5c1679281 151 SUPERFAMILY SSF51283 1 150 1.31E-55 T 29-03-2018 IPR029054 dUTPase-like AM460_RS01695 1d27ef957f4749c9fae3257388413a9d 690 Pfam PF00890 FAD binding domain 43 475 2.8E-29 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01695 1d27ef957f4749c9fae3257388413a9d 690 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 44 63 1.4E-8 T 29-03-2018 AM460_RS01695 1d27ef957f4749c9fae3257388413a9d 690 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 462 1.4E-8 T 29-03-2018 AM460_RS01695 1d27ef957f4749c9fae3257388413a9d 690 SUPERFAMILY SSF51905 441 494 9.74E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS01695 1d27ef957f4749c9fae3257388413a9d 690 SUPERFAMILY SSF51905 39 276 9.74E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS01695 1d27ef957f4749c9fae3257388413a9d 690 Gene3D G3DSA:3.50.50.60 40 533 4.7E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS02880 52bc1812478120f326f1cea9fd7db25e 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 3.0E-33 T 29-03-2018 IPR020317 Uncharacterised protein family YjbD AM460_RS02880 52bc1812478120f326f1cea9fd7db25e 90 Pfam PF11656 YjbD family (DUF3811) 3 90 2.6E-39 T 29-03-2018 IPR020317 Uncharacterised protein family YjbD AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 Gene3D G3DSA:2.40.50.230 380 464 2.5E-22 T 29-03-2018 IPR006531 Gp5 N-terminal AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 14 506 7.9E-75 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 SUPERFAMILY SSF69279 12 187 4.36E-50 T 29-03-2018 AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 605 743 1.5E-47 T 29-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 SUPERFAMILY SSF69279 198 375 2.55E-51 T 29-03-2018 AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 Gene3D G3DSA:4.10.180.10 289 304 5.7E-9 T 29-03-2018 AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 508 3.7E-137 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 SUPERFAMILY SSF69255 374 462 1.26E-25 T 29-03-2018 AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 Pfam PF05954 Phage late control gene D protein (GPD) 30 346 6.9E-62 T 29-03-2018 AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 Gene3D G3DSA:3.55.50.10 106 202 5.0E-27 T 29-03-2018 AM460_RS10145 c53cc7f5420df8fafa2efd88ad95a0f7 790 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 482 585 1.3E-33 T 29-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 SUPERFAMILY SSF50800 147 264 3.24E-17 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 SUPERFAMILY SSF50800 3 50 3.24E-17 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 SUPERFAMILY SSF141673 4 132 1.96E-27 T 29-03-2018 AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 296 362 9.1E-14 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 Gene3D G3DSA:3.10.20.30 268 369 1.7E-16 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 SUPERFAMILY SSF54292 284 367 1.19E-19 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 Gene3D G3DSA:2.40.33.20 1 267 3.7E-53 T 29-03-2018 AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 Pfam PF03473 MOSC domain 139 262 4.1E-31 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM460_RS20805 a8d37babce145423b66d8d7ca515433c 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 2.7E-28 T 29-03-2018 IPR005303 MOSC, N-terminal beta barrel AM460_RS24245 4f10e44c4dd085b188fb4d55885a765e 303 Gene3D G3DSA:3.40.50.720 1 167 1.4E-23 T 29-03-2018 AM460_RS24245 4f10e44c4dd085b188fb4d55885a765e 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 9.1E-25 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM460_RS24245 4f10e44c4dd085b188fb4d55885a765e 303 SUPERFAMILY SSF51735 1 167 1.16E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS24245 4f10e44c4dd085b188fb4d55885a765e 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 7.9E-76 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM460_RS24245 4f10e44c4dd085b188fb4d55885a765e 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 3.4E-38 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM460_RS24245 4f10e44c4dd085b188fb4d55885a765e 303 SUPERFAMILY SSF48179 168 289 1.63E-39 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS24245 4f10e44c4dd085b188fb4d55885a765e 303 Gene3D G3DSA:1.10.1040.10 168 296 4.7E-41 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 SUPERFAMILY SSF53671 19 373 1.57E-57 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 PRINTS PR00101 Aspartate carbamoyltransferase signature 95 104 3.7E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 PRINTS PR00101 Aspartate carbamoyltransferase signature 164 181 3.7E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 PRINTS PR00101 Aspartate carbamoyltransferase signature 57 79 3.7E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 Gene3D G3DSA:3.40.50.1370 187 378 6.5E-37 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 22 178 6.2E-25 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 6 394 5.6E-204 T 29-03-2018 IPR017702 Putative carbamoyltransferase YgeW AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 187 373 6.4E-41 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 Gene3D G3DSA:3.40.50.1370 8 186 4.3E-33 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 341 364 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 323 332 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS09835 77bdf7f72ab2f675745beea848f0151b 396 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 67 86 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 5.2E-5 T 29-03-2018 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 5.2E-5 T 29-03-2018 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 7.0E-75 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 Pfam PF00117 Glutamine amidotransferase class-I 6 194 1.8E-18 T 29-03-2018 IPR017926 Glutamine amidotransferase AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 PIRSF PIRSF000495 1 196 1.7E-62 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 SUPERFAMILY SSF52317 3 195 1.74E-52 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 PRINTS PR00097 Anthranilate synthase component II signature 72 83 8.9E-5 T 29-03-2018 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 PRINTS PR00097 Anthranilate synthase component II signature 174 187 8.9E-5 T 29-03-2018 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.24 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM460_RS14160 7ca41072db96bdda57532d50e874fc18 196 Gene3D G3DSA:3.40.50.880 1 196 8.2E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS14235 b1b2e3a6bf837a6bc2f47e161d9ca3ed 169 SUPERFAMILY SSF143422 19 146 2.62E-44 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS14235 b1b2e3a6bf837a6bc2f47e161d9ca3ed 169 SMART SM01321 28 146 5.8E-35 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS14235 b1b2e3a6bf837a6bc2f47e161d9ca3ed 169 Pfam PF01797 Transposase IS200 like 29 146 1.8E-33 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS14235 b1b2e3a6bf837a6bc2f47e161d9ca3ed 169 Gene3D G3DSA:3.30.70.1290 19 153 3.4E-23 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:1.10.287.180 3 75 4.9E-33 T 29-03-2018 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF54534 81 157 4.05E-25 T 29-03-2018 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 7.7E-61 T 29-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF46557 3 78 2.35E-29 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.312 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.3E-29 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.0E-32 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:3.10.50.30 76 158 1.7E-28 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM460_RS07545 f95204fe2fc7c5121ae469e673ef6f03 158 PIRSF PIRSF006092 1 158 6.8E-56 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM460_RS24975 7a16d22071b46835719a743330204e12 236 Gene3D G3DSA:2.60.40.10 27 156 4.4E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS24975 7a16d22071b46835719a743330204e12 236 SUPERFAMILY SSF49354 26 127 9.42E-8 T 29-03-2018 IPR008962 PapD-like AM460_RS20270 9bb635f94b022bdb20304aae8a9fb338 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 372 75.632 T 29-03-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 AM460_RS20270 9bb635f94b022bdb20304aae8a9fb338 372 SUPERFAMILY SSF51905 2 217 8.42E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS20270 9bb635f94b022bdb20304aae8a9fb338 372 SUPERFAMILY SSF51905 314 371 8.42E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS20270 9bb635f94b022bdb20304aae8a9fb338 372 SUPERFAMILY SSF54373 213 314 2.82E-17 T 29-03-2018 AM460_RS20270 9bb635f94b022bdb20304aae8a9fb338 372 Pfam PF01266 FAD dependent oxidoreductase 4 352 7.6E-46 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM460_RS20270 9bb635f94b022bdb20304aae8a9fb338 372 Gene3D G3DSA:3.50.50.60 1 372 1.2E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.0E-52 T 29-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 SUPERFAMILY SSF56808 6 225 3.66E-83 T 29-03-2018 IPR023674 Ribosomal protein L1-like AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.503 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.2E-107 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 Gene3D G3DSA:3.30.190.20 150 228 1.2E-21 T 29-03-2018 AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 29-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 Gene3D G3DSA:3.40.50.790 68 149 4.0E-35 T 29-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AM460_RS03130 6c5cd5436b12e132df850ee28d7b50fa 234 PIRSF PIRSF002155 1 227 1.7E-78 T 29-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS25810 f5248d3eb6fc41b9c0e5a7039bc3ad3f 79 Gene3D G3DSA:3.90.540.10 1 67 2.1E-11 T 29-03-2018 AM460_RS25810 f5248d3eb6fc41b9c0e5a7039bc3ad3f 79 SUPERFAMILY SSF54060 1 64 1.65E-11 T 29-03-2018 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 SUPERFAMILY SSF47384 224 299 3.53E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 5.1E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 299 2.5E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 Gene3D G3DSA:3.30.565.10 303 457 2.2E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 SUPERFAMILY SSF55874 289 453 7.91E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 SMART SM00388 238 300 1.4E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 SMART SM00304 184 237 1.1E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 146 2.0E-10 T 29-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 SMART SM00387 345 455 3.9E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 Gene3D G3DSA:1.10.287.130 228 296 5.5E-16 T 29-03-2018 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 Pfam PF00672 HAMP domain 184 234 5.7E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03515 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS19325 41ce1a6bb0e598417029be4c91380a3b 304 SUPERFAMILY SSF52317 5 160 1.79E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS19325 41ce1a6bb0e598417029be4c91380a3b 304 Gene3D G3DSA:3.40.50.10740 2 144 5.0E-38 T 29-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AM460_RS19325 41ce1a6bb0e598417029be4c91380a3b 304 SUPERFAMILY SSF141986 139 289 7.98E-43 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM460_RS19325 41ce1a6bb0e598417029be4c91380a3b 304 PIRSF PIRSF028757 1 300 4.5E-91 T 29-03-2018 IPR003507 Peptidase family S66 AM460_RS19325 41ce1a6bb0e598417029be4c91380a3b 304 Pfam PF02016 LD-carboxypeptidase 6 284 1.6E-64 T 29-03-2018 IPR003507 Peptidase family S66 AM460_RS19325 41ce1a6bb0e598417029be4c91380a3b 304 Gene3D G3DSA:3.50.30.60 145 300 3.2E-41 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM460_RS00825 37684d301977c26fff05b379b229dcdd 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 446 1.1E-182 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS00825 37684d301977c26fff05b379b229dcdd 447 Pfam PF02447 GntP family permease 5 446 2.6E-167 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS00825 37684d301977c26fff05b379b229dcdd 447 PIRSF PIRSF002746 1 447 4.6E-146 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 472 3.5E-168 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 287 367 2.6E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 392 463 3.1E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 Pfam PF13365 Trypsin-like peptidase domain 114 250 2.0E-32 T 29-03-2018 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 Gene3D G3DSA:2.40.10.10 161 279 7.7E-44 T 29-03-2018 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 SUPERFAMILY SSF50156 271 379 1.46E-22 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 SUPERFAMILY SSF50494 7 59 1.97E-64 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 SUPERFAMILY SSF50494 111 298 1.97E-64 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 2.6E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 2.6E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 2.6E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 2.6E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 2.6E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 2.6E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 SMART SM00228 289 371 8.5E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 SMART SM00228 396 466 1.5E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 Gene3D G3DSA:2.40.10.10 27 160 8.5E-32 T 29-03-2018 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 Gene3D G3DSA:2.30.42.10 284 388 2.7E-26 T 29-03-2018 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 Gene3D G3DSA:2.30.42.10 389 474 6.3E-17 T 29-03-2018 AM460_RS25495 38609e8c1ab63cc980d850808ee38499 474 SUPERFAMILY SSF50156 398 471 2.63E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 117.135 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 SMART SM00433 35 797 2.4E-283 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF54211 221 392 5.12E-62 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 2.6E-30 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Gene3D G3DSA:3.30.230.10 221 392 2.9E-66 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF00204 DNA gyrase B 221 390 1.9E-59 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF56719 730 795 8.11E-87 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF56719 394 560 8.11E-87 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 SMART SM00387 31 175 2.6E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF01751 Toprim domain 419 531 4.1E-18 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 5.8E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.6E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF55874 4 220 1.22E-77 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 1.6E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Gene3D G3DSA:3.30.565.10 17 220 5.7E-76 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04710 955cda65d616cd2bc5d9ff4ebab37c60 804 Gene3D G3DSA:3.40.50.670 402 801 1.3E-108 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 Pfam PF00394 Multicopper oxidase 203 292 6.2E-6 T 29-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 ProSitePatterns PS00080 Multicopper oxidases signature 2. 499 510 - T 29-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 Pfam PF07731 Multicopper oxidase 399 516 5.1E-24 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 SUPERFAMILY SSF49503 348 516 3.7E-31 T 29-03-2018 IPR008972 Cupredoxin AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 Gene3D G3DSA:2.60.40.420 29 169 1.3E-28 T 29-03-2018 IPR008972 Cupredoxin AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 Pfam PF07732 Multicopper oxidase 55 165 2.6E-31 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 SUPERFAMILY SSF49503 32 167 1.56E-31 T 29-03-2018 IPR008972 Cupredoxin AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 Gene3D G3DSA:2.60.40.420 345 516 4.2E-37 T 29-03-2018 IPR008972 Cupredoxin AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 Gene3D G3DSA:2.60.40.420 170 340 3.6E-23 T 29-03-2018 IPR008972 Cupredoxin AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 SUPERFAMILY SSF49503 374 395 5.83E-33 T 29-03-2018 IPR008972 Cupredoxin AM460_RS25720 c2ed2f2dfac48f685ecb05952a8c53d8 516 SUPERFAMILY SSF49503 172 288 5.83E-33 T 29-03-2018 IPR008972 Cupredoxin AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.2E-66 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.1E-17 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.1E-17 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.1E-17 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 Gene3D G3DSA:3.40.50.40 210 337 8.5E-42 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 5.3E-144 T 29-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 Gene3D G3DSA:3.40.50.1170 1 208 6.1E-82 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 PIRSF PIRSF500176 2 332 1.2E-120 T 29-03-2018 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 SUPERFAMILY SSF53774 3 335 1.57E-114 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 PIRSF PIRSF001220 1 334 4.2E-98 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS16160 cb05d52d880e4ccac2a8eadd64c39c5e 338 SMART SM00870 5 323 4.1E-143 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS02955 eb47d2ec51afeacb247ae1ccbbe86fcd 574 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.539 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM460_RS02955 eb47d2ec51afeacb247ae1ccbbe86fcd 574 PIRSF PIRSF000719 1 574 3.9E-300 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM460_RS02955 eb47d2ec51afeacb247ae1ccbbe86fcd 574 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM460_RS02955 eb47d2ec51afeacb247ae1ccbbe86fcd 574 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 1.1E-244 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM460_RS17740 87887b19d967fb965aef24b080076f51 74 Pfam PF04325 Protein of unknown function (DUF465) 19 66 5.8E-14 T 29-03-2018 IPR007420 Protein of unknown function DUF465 AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.846 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 SUPERFAMILY SSF51246 278 353 9.42E-21 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 Gene3D G3DSA:3.40.50.20 1 69 1.9E-15 T 29-03-2018 AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 6.8E-117 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 Gene3D G3DSA:3.30.1490.20 94 155 3.4E-12 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 Pfam PF02222 ATP-grasp domain 88 254 8.0E-57 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 Gene3D G3DSA:3.30.470.20 156 339 2.2E-33 T 29-03-2018 AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 SUPERFAMILY SSF52440 2 76 2.16E-15 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS23725 129526e3530070da39ea5c8c672001d0 355 SUPERFAMILY SSF56059 79 274 3.01E-59 T 29-03-2018 AM460_RS03885 236315af079e7386a95b525c922cce8d 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM460_RS03885 236315af079e7386a95b525c922cce8d 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 259 65.499 T 29-03-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 AM460_RS03885 236315af079e7386a95b525c922cce8d 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM460_RS03885 236315af079e7386a95b525c922cce8d 260 PIRSF PIRSF005902 1 260 6.0E-76 T 29-03-2018 IPR001130 TatD family GO:0016788 AM460_RS03885 236315af079e7386a95b525c922cce8d 260 Pfam PF01026 TatD related DNase 2 256 2.3E-69 T 29-03-2018 IPR001130 TatD family GO:0016788 AM460_RS03885 236315af079e7386a95b525c922cce8d 260 SUPERFAMILY SSF51556 1 258 3.99E-85 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS03885 236315af079e7386a95b525c922cce8d 260 Gene3D G3DSA:3.20.20.140 1 259 6.3E-81 T 29-03-2018 AM460_RS22010 5c8582d7e6f35166b358ca79e5b5c576 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 6.6E-63 T 29-03-2018 IPR019703 Protein of unknown function DUF2593 AM460_RS13120 3c7d7b5512ec0ed53605e13885beb92a 419 SUPERFAMILY SSF51905 249 416 3.67E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13120 3c7d7b5512ec0ed53605e13885beb92a 419 SUPERFAMILY SSF51905 1 57 3.67E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13120 3c7d7b5512ec0ed53605e13885beb92a 419 Gene3D G3DSA:3.50.50.60 3 419 1.7E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13120 3c7d7b5512ec0ed53605e13885beb92a 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 6.1E-178 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM460_RS13120 3c7d7b5512ec0ed53605e13885beb92a 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 50.103 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM460_RS13120 3c7d7b5512ec0ed53605e13885beb92a 419 Pfam PF00890 FAD binding domain 4 399 1.3E-61 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS13120 3c7d7b5512ec0ed53605e13885beb92a 419 PIRSF PIRSF000141 1 418 8.8E-173 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM460_RS27370 0625a987d27a610560b046fe95e930bb 85 Pfam PF10723 Replication regulatory protein RepB 1 83 4.9E-26 T 29-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 AM460_RS26230 2ac611afd4e9ae21749323a5914c9e0e 261 Hamap MF_01051 Carnitinyl-CoA dehydratase [caiD]. 1 261 73.627 T 29-03-2018 IPR022852 Carnitinyl-CoA dehydratase GO:0016836 AM460_RS26230 2ac611afd4e9ae21749323a5914c9e0e 261 Gene3D G3DSA:1.10.12.10 215 261 6.1E-17 T 29-03-2018 IPR014748 Crontonase, C-terminal AM460_RS26230 2ac611afd4e9ae21749323a5914c9e0e 261 SUPERFAMILY SSF52096 2 261 7.18E-79 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS26230 2ac611afd4e9ae21749323a5914c9e0e 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM460_RS26230 2ac611afd4e9ae21749323a5914c9e0e 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 260 6.7E-87 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM460_RS26230 2ac611afd4e9ae21749323a5914c9e0e 261 Gene3D G3DSA:3.90.226.10 4 214 1.1E-65 T 29-03-2018 AM460_RS06685 ef1fc8010739057d521c2c08f6fa32f9 240 Pfam PF08348 YheO-like PAS domain 29 137 4.3E-36 T 29-03-2018 IPR013559 YheO-like AM460_RS06685 ef1fc8010739057d521c2c08f6fa32f9 240 Gene3D G3DSA:1.10.10.60 185 240 3.4E-6 T 29-03-2018 AM460_RS06685 ef1fc8010739057d521c2c08f6fa32f9 240 Pfam PF13309 HTH domain 171 228 3.3E-19 T 29-03-2018 AM460_RS06685 ef1fc8010739057d521c2c08f6fa32f9 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 6.0E-71 T 29-03-2018 IPR013559 YheO-like AM460_RS15005 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13817 IS66 C-terminal element 494 530 1.3E-15 T 29-03-2018 AM460_RS15005 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13007 Transposase C of IS166 homeodomain 60 130 5.8E-11 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS15005 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF03050 Transposase IS66 family 197 486 1.9E-95 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS15005 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 138 182 4.1E-11 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS09110 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13817 IS66 C-terminal element 494 530 1.3E-15 T 29-03-2018 AM460_RS09110 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13007 Transposase C of IS166 homeodomain 60 130 5.8E-11 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS09110 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF03050 Transposase IS66 family 197 486 1.9E-95 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS09110 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 138 182 4.1E-11 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS19170 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13817 IS66 C-terminal element 494 530 1.3E-15 T 29-03-2018 AM460_RS19170 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13007 Transposase C of IS166 homeodomain 60 130 5.8E-11 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS19170 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF03050 Transposase IS66 family 197 486 1.9E-95 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS19170 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 138 182 4.1E-11 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS01275 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13817 IS66 C-terminal element 494 530 1.3E-15 T 29-03-2018 AM460_RS01275 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13007 Transposase C of IS166 homeodomain 60 130 5.8E-11 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS01275 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF03050 Transposase IS66 family 197 486 1.9E-95 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS01275 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 138 182 4.1E-11 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS09245 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13817 IS66 C-terminal element 494 530 1.3E-15 T 29-03-2018 AM460_RS09245 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13007 Transposase C of IS166 homeodomain 60 130 5.8E-11 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS09245 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF03050 Transposase IS66 family 197 486 1.9E-95 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS09245 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 138 182 4.1E-11 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS27960 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13817 IS66 C-terminal element 494 530 1.3E-15 T 29-03-2018 AM460_RS27960 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13007 Transposase C of IS166 homeodomain 60 130 5.8E-11 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS27960 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF03050 Transposase IS66 family 197 486 1.9E-95 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS27960 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 138 182 4.1E-11 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS25640 7b4c37aae92d4fdcbc234537a80b24e6 200 SUPERFAMILY SSF49401 43 200 1.49E-16 T 29-03-2018 IPR008966 Adhesion domain AM460_RS25640 7b4c37aae92d4fdcbc234537a80b24e6 200 Gene3D G3DSA:2.60.40.1090 42 200 2.4E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25640 7b4c37aae92d4fdcbc234537a80b24e6 200 Pfam PF00419 Fimbrial protein 50 200 3.0E-10 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS27835 51432fa60f50e046a54a8904169b9118 340 Gene3D G3DSA:1.10.260.40 31 97 9.0E-5 T 29-03-2018 AM460_RS27835 51432fa60f50e046a54a8904169b9118 340 Gene3D G3DSA:3.30.420.10 114 323 3.2E-24 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS27835 51432fa60f50e046a54a8904169b9118 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS27835 51432fa60f50e046a54a8904169b9118 340 SUPERFAMILY SSF46689 12 86 1.43E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS27835 51432fa60f50e046a54a8904169b9118 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM460_RS27835 51432fa60f50e046a54a8904169b9118 340 Pfam PF00665 Integrase core domain 118 243 1.8E-26 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS27835 51432fa60f50e046a54a8904169b9118 340 Gene3D G3DSA:1.10.10.60 2 30 8.9E-14 T 29-03-2018 AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 Gene3D G3DSA:1.10.10.10 18 99 1.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 Gene3D G3DSA:3.40.190.10 105 224 5.9E-14 T 29-03-2018 AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 Gene3D G3DSA:3.40.190.10 246 314 0.0012 T 29-03-2018 AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 1.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 Pfam PF03466 LysR substrate binding domain 137 309 2.3E-16 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 SUPERFAMILY SSF46785 19 98 1.09E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 8.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 8.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS26005 1b8c3dd560a6d54a5a7c0cde8273707a 314 SUPERFAMILY SSF53850 105 311 7.6E-40 T 29-03-2018 AM460_RS17315 0a633e4b188bd2a959403c010d5ba278 308 SUPERFAMILY SSF56601 7 308 1.22E-115 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS17315 0a633e4b188bd2a959403c010d5ba278 308 Pfam PF04960 Glutaminase 24 308 2.4E-113 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM460_RS17315 0a633e4b188bd2a959403c010d5ba278 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.251 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM460_RS17315 0a633e4b188bd2a959403c010d5ba278 308 Gene3D G3DSA:3.40.710.10 2 308 1.0E-123 T 29-03-2018 AM460_RS17315 0a633e4b188bd2a959403c010d5ba278 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 1.9E-131 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 PIRSF PIRSF001220 20 348 5.0E-94 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 SMART SM00870 25 342 8.0E-147 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 SUPERFAMILY SSF53774 23 347 2.49E-109 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 3.0E-23 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 3.0E-23 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 3.0E-23 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 Pfam PF00710 Asparaginase, N-terminal 25 216 7.6E-64 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 3.3E-170 T 29-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 PIRSF PIRSF500176 22 348 8.2E-83 T 29-03-2018 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 Gene3D G3DSA:3.40.50.1170 21 231 2.3E-64 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM460_RS09340 cf655bcc0930d4c671c10fc1e065cb2b 348 Gene3D G3DSA:3.40.50.40 235 347 8.4E-31 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 Gene3D G3DSA:3.40.1190.20 1 297 5.8E-65 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 Pfam PF00294 pfkB family carbohydrate kinase 1 286 2.7E-56 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 PRINTS PR00990 Ribokinase signature 33 52 2.7E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 PRINTS PR00990 Ribokinase signature 6 27 2.7E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 PRINTS PR00990 Ribokinase signature 209 220 2.7E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 Hamap MF_00999 Sulfofructose kinase. 1 298 61.366 T 29-03-2018 IPR030877 Sulfofructose kinase GO:0061594 MetaCyc: PWY-7446 AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 SUPERFAMILY SSF53613 1 294 2.65E-66 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS03720 47b7fa210b64febb79ef6c60307a5c1c 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 238 251 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 173 1.1E-46 T 29-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 Pfam PF00691 OmpA family 72 167 4.5E-22 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 73 95 2.4E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 118 134 2.4E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 103 118 2.4E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 SUPERFAMILY SSF103088 60 172 7.85E-35 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS22630 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 Gene3D G3DSA:3.30.1330.60 44 173 1.2E-34 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS05670 db885011d46d91b8651a954e01f487be 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM460_RS05670 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.1E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.1E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.1E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.1E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 1.1E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.1E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.1E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 SUPERFAMILY SSF118215 9 401 1.31E-121 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.237 T 29-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 Gene3D G3DSA:1.10.3860.10 1 408 3.1E-116 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 7.6E-112 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS05670 db885011d46d91b8651a954e01f487be 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.385 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 29-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:3.40.1380.10 42 239 1.6E-74 T 29-03-2018 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 240 282 1.7E-14 T 29-03-2018 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 2 41 2.9E-18 T 29-03-2018 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.9E-113 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.9E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.9E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.9E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.9E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 SUPERFAMILY SSF52943 2 287 5.1E-97 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04525 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Pfam PF00231 ATP synthase 5 286 1.4E-96 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.8E-114 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 44.081 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 Pfam PF00557 Metallopeptidase family M24 12 242 3.7E-54 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 Gene3D G3DSA:3.90.230.10 1 262 1.9E-89 T 29-03-2018 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 SUPERFAMILY SSF55920 3 255 4.32E-93 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 6.1E-24 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 6.1E-24 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 6.1E-24 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS25470 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 6.1E-24 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 Gene3D G3DSA:1.10.10.10 1 85 4.7E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 SUPERFAMILY SSF46785 4 89 4.75E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 Gene3D G3DSA:3.40.190.10 179 270 1.6E-24 T 29-03-2018 AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 Gene3D G3DSA:3.40.190.10 90 178 2.8E-22 T 29-03-2018 AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 SUPERFAMILY SSF53850 89 296 7.48E-41 T 29-03-2018 AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 Pfam PF03466 LysR substrate binding domain 88 296 3.1E-46 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS17120 4a911123d138b035b9d9f79d84fe3f8e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.8E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 3.6E-14 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 SUPERFAMILY SSF51905 356 447 7.41E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 SUPERFAMILY SSF51905 4 255 7.41E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 Gene3D G3DSA:3.90.700.10 258 348 1.4E-33 T 29-03-2018 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.9E-11 T 29-03-2018 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.9E-11 T 29-03-2018 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 Gene3D G3DSA:3.50.50.60 1 257 1.9E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 SUPERFAMILY SSF56425 238 353 1.08E-40 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 PIRSF PIRSF000171 339 526 2.8E-13 T 29-03-2018 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 PIRSF PIRSF000171 1 260 2.0E-22 T 29-03-2018 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 1.0E-239 T 29-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 Pfam PF00890 FAD binding domain 10 392 2.7E-106 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 SUPERFAMILY SSF46977 425 522 1.14E-31 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 6.7E-5 T 29-03-2018 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.7E-5 T 29-03-2018 AM460_RS11520 41311c150b84d370c13b6cf3993dd07a 540 Gene3D G3DSA:1.20.58.100 423 522 9.4E-29 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS12080 06ee2049e8fe89cf0954a640293fa532 159 PIRSF PIRSF036409 1 148 1.6E-59 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM460_RS12080 06ee2049e8fe89cf0954a640293fa532 159 SUPERFAMILY SSF52540 3 148 3.55E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS12080 06ee2049e8fe89cf0954a640293fa532 159 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 5.7E-30 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM460_RS12080 06ee2049e8fe89cf0954a640293fa532 159 Gene3D G3DSA:3.40.50.300 2 158 4.6E-17 T 29-03-2018 AM460_RS12080 06ee2049e8fe89cf0954a640293fa532 159 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 144 7.4E-59 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM460_RS23330 5151a11813cce938435888ddb8383dfb 268 SUPERFAMILY SSF55895 33 262 3.79E-29 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM460_RS23330 5151a11813cce938435888ddb8383dfb 268 Gene3D G3DSA:3.90.730.10 30 267 8.9E-36 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM460_RS23330 5151a11813cce938435888ddb8383dfb 268 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 148 159 - T 29-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 AM460_RS23330 5151a11813cce938435888ddb8383dfb 268 Pfam PF00445 Ribonuclease T2 family 38 237 8.8E-13 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM460_RS23330 5151a11813cce938435888ddb8383dfb 268 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 75 82 - T 29-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 SUPERFAMILY SSF88723 4 159 1.57E-37 T 29-03-2018 IPR029060 PIN domain-like AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 5.5E-26 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 SMART SM00475 3 250 7.1E-110 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 SUPERFAMILY SSF47807 160 243 9.57E-24 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 146 1.7E-28 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 SMART SM00279 162 197 2.0E-11 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 46.034 T 29-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 Gene3D G3DSA:1.10.150.20 174 251 3.2E-24 T 29-03-2018 AM460_RS10280 9c14cf7e5369adb54581437e1ae98896 251 Gene3D G3DSA:3.40.50.1010 3 173 6.5E-40 T 29-03-2018 IPR029060 PIN domain-like AM460_RS23110 78cc92376605a67ea6bd61f8d18d489e 302 Gene3D G3DSA:3.40.190.10 171 302 4.0E-20 T 29-03-2018 AM460_RS23110 78cc92376605a67ea6bd61f8d18d489e 302 SMART SM00062 41 273 1.1E-71 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS23110 78cc92376605a67ea6bd61f8d18d489e 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 4.7E-49 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS23110 78cc92376605a67ea6bd61f8d18d489e 302 SUPERFAMILY SSF53850 8 274 7.25E-65 T 29-03-2018 AM460_RS23110 78cc92376605a67ea6bd61f8d18d489e 302 Gene3D G3DSA:3.40.190.10 7 170 3.8E-33 T 29-03-2018 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 159 234 8.2E-15 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 SUPERFAMILY SSF52009 355 463 2.22E-19 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Gene3D G3DSA:3.30.1340.10 156 241 5.5E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Gene3D G3DSA:3.40.50.510 1 147 2.0E-32 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Pfam PF00381 PTS HPr component phosphorylation site 160 236 8.5E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Pfam PF05524 PEP-utilising enzyme, N-terminal 258 368 1.8E-20 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 167 174 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 SUPERFAMILY SSF53062 1 127 2.88E-29 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 SUPERFAMILY SSF47831 276 384 2.09E-26 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Pfam PF03610 PTS system fructose IIA component 4 120 5.8E-28 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 PRINTS PR00107 Phosphocarrier protein signature 167 183 9.6E-7 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 PRINTS PR00107 Phosphocarrier protein signature 207 224 9.6E-7 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 PRINTS PR00107 Phosphocarrier protein signature 192 207 9.6E-7 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 SUPERFAMILY SSF55594 158 241 4.32E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 127 1.7E-41 T 29-03-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Gene3D G3DSA:3.50.30.10 385 468 3.4E-14 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Pfam PF00391 PEP-utilising enzyme, mobile domain 393 464 4.2E-13 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS19260 237903d2b87ad151ea077aca525df64b 472 Gene3D G3DSA:1.10.274.10 268 384 3.7E-26 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS23120 4eff4b7ee0ad58011f2270ddd618bc6a 224 SUPERFAMILY SSF161098 14 210 8.5E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS23120 4eff4b7ee0ad58011f2270ddd618bc6a 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.2E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS23120 4eff4b7ee0ad58011f2270ddd618bc6a 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.2E-24 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS23120 4eff4b7ee0ad58011f2270ddd618bc6a 224 Gene3D G3DSA:1.10.3720.10 2 224 5.9E-41 T 29-03-2018 AM460_RS25345 08bd307c681e8d777064b9a1e5756d4e 140 Pfam PF00472 RF-1 domain 8 132 7.2E-26 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM460_RS25345 08bd307c681e8d777064b9a1e5756d4e 140 SUPERFAMILY SSF75620 7 109 1.92E-14 T 29-03-2018 AM460_RS25345 08bd307c681e8d777064b9a1e5756d4e 140 Gene3D G3DSA:3.30.160.20 1 140 4.4E-43 T 29-03-2018 AM460_RS25345 08bd307c681e8d777064b9a1e5756d4e 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM460_RS06300 ca83286ba4c050bccd6d7fb546a29228 160 Pfam PF01137 RNA 3'-terminal phosphate cyclase 65 146 2.2E-11 T 29-03-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain AM460_RS06300 ca83286ba4c050bccd6d7fb546a29228 160 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 18 95 1.3E-5 T 29-03-2018 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain AM460_RS06300 ca83286ba4c050bccd6d7fb546a29228 160 SUPERFAMILY SSF55205 99 158 6.54E-10 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM460_RS06300 ca83286ba4c050bccd6d7fb546a29228 160 SUPERFAMILY SSF52913 20 100 3.92E-19 T 29-03-2018 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain AM460_RS06300 ca83286ba4c050bccd6d7fb546a29228 160 Gene3D G3DSA:3.65.10.20 5 157 4.6E-19 T 29-03-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain AM460_RS02720 e27e49a4b0072fd9601550b5ab3bcf10 523 Gene3D G3DSA:3.40.1080.10 3 272 9.1E-57 T 29-03-2018 AM460_RS02720 e27e49a4b0072fd9601550b5ab3bcf10 523 Gene3D G3DSA:3.40.1080.10 280 522 1.3E-43 T 29-03-2018 AM460_RS02720 e27e49a4b0072fd9601550b5ab3bcf10 523 Pfam PF01144 Coenzyme A transferase 9 250 1.1E-24 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS02720 e27e49a4b0072fd9601550b5ab3bcf10 523 PIRSF PIRSF000858 1 522 5.3E-172 T 29-03-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 AM460_RS02720 e27e49a4b0072fd9601550b5ab3bcf10 523 SUPERFAMILY SSF100950 6 267 1.13E-74 T 29-03-2018 AM460_RS02720 e27e49a4b0072fd9601550b5ab3bcf10 523 SUPERFAMILY SSF100950 280 518 2.44E-62 T 29-03-2018 AM460_RS02720 e27e49a4b0072fd9601550b5ab3bcf10 523 SMART SM00882 6 251 9.9E-54 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS12600 be8787ea42e3b54011d7045f955e7b16 310 Pfam PF01226 Formate/nitrite transporter 40 276 2.8E-40 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM460_RS12600 be8787ea42e3b54011d7045f955e7b16 310 Gene3D G3DSA:1.20.1080.10 31 292 4.5E-50 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM460_RS21470 3602d04aa95c496a9573e83fbb3658f9 150 SUPERFAMILY SSF88697 3 86 1.24E-14 T 29-03-2018 IPR015947 PUA-like domain AM460_RS21470 3602d04aa95c496a9573e83fbb3658f9 150 SMART SM01022 7 107 3.1E-5 T 29-03-2018 IPR007374 ASCH domain AM460_RS21470 3602d04aa95c496a9573e83fbb3658f9 150 Gene3D G3DSA:2.30.130.30 1 79 8.5E-24 T 29-03-2018 AM460_RS21470 3602d04aa95c496a9573e83fbb3658f9 150 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 5 76 1.5E-21 T 29-03-2018 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 Pfam PF00551 Formyl transferase 86 262 6.3E-56 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 PIRSF PIRSF036480 4 280 4.6E-114 T 29-03-2018 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.444 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 SUPERFAMILY SSF55021 6 67 4.0E-9 T 29-03-2018 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 1.5E-133 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 4.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 4.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 4.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 4.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 4.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 4.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 SUPERFAMILY SSF53328 86 279 4.06E-61 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 Gene3D G3DSA:3.30.70.260 3 83 4.2E-12 T 29-03-2018 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 Gene3D G3DSA:3.40.50.170 85 280 5.1E-54 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS18890 71e7fe4bf0c14440785da53274d3b4ea 280 Pfam PF01842 ACT domain 8 69 5.7E-8 T 29-03-2018 IPR002912 ACT domain AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 146 7.5E-20 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 Gene3D G3DSA:3.30.390.50 158 259 2.7E-14 T 29-03-2018 AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 258 1.7E-147 T 29-03-2018 IPR017698 Probable selenate reductase, FAD-binding subunit AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 Gene3D G3DSA:3.30.465.10 54 155 2.8E-13 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 Gene3D G3DSA:3.30.43.10 3 44 4.2E-4 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 SMART SM01092 161 251 2.0E-11 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 167 248 1.1E-4 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 SUPERFAMILY SSF56176 4 154 4.96E-24 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS09785 d0d36e3e3db4f466d43b854711b01d8f 259 SUPERFAMILY SSF55447 164 252 4.32E-13 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 Gene3D G3DSA:1.10.1660.10 56 133 1.0E-15 T 29-03-2018 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 5.6E-62 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 Pfam PF13411 MerR HTH family regulatory protein 1 66 5.6E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 SUPERFAMILY SSF46955 1 126 1.39E-35 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.6E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.6E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.6E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 SMART SM00422 1 70 4.4E-30 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS23890 cb28374773d04453101b0ab4bb57dea2 135 Gene3D G3DSA:1.10.1660.10 1 55 8.5E-20 T 29-03-2018 AM460_RS02035 3223fc170d000d89613bf01a37141b47 289 Pfam PF15922 YjeJ-like 1 283 1.6E-154 T 29-03-2018 IPR031810 YjeJ-like AM460_RS13845 418602c64ff76031297d809d554619b3 344 SUPERFAMILY SSF49401 194 344 4.82E-11 T 29-03-2018 IPR008966 Adhesion domain AM460_RS13845 418602c64ff76031297d809d554619b3 344 PIRSF PIRSF030811 1 344 1.6E-165 T 29-03-2018 IPR016959 Uncharacterised conserved protein UCP030811 AM460_RS13845 418602c64ff76031297d809d554619b3 344 Pfam PF00419 Fimbrial protein 183 343 5.2E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS13845 418602c64ff76031297d809d554619b3 344 Gene3D G3DSA:2.60.40.1090 182 344 3.4E-12 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS09410 cdd5f9cab8a3311b675752041f458eed 243 SUPERFAMILY SSF75217 75 242 2.35E-51 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS09410 cdd5f9cab8a3311b675752041f458eed 243 PIRSF PIRSF015601 2 242 1.1E-51 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS09410 cdd5f9cab8a3311b675752041f458eed 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.0E-95 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS09410 cdd5f9cab8a3311b675752041f458eed 243 Gene3D G3DSA:3.40.1280.10 74 243 1.0E-55 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS09410 cdd5f9cab8a3311b675752041f458eed 243 SUPERFAMILY SSF88697 2 70 4.22E-18 T 29-03-2018 IPR015947 PUA-like domain AM460_RS09410 cdd5f9cab8a3311b675752041f458eed 243 Gene3D G3DSA:2.40.240.20 1 73 2.3E-22 T 29-03-2018 AM460_RS09410 cdd5f9cab8a3311b675752041f458eed 243 Pfam PF04452 RNA methyltransferase 20 236 9.6E-74 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 92 1.6E-15 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 42 52 1.2E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 60 74 1.2E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 83 91 1.2E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.9E-63 T 29-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 Gene3D G3DSA:3.10.20.30 8 111 1.1E-33 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS11770 e249c94755ee9bb00025226e77bb78bc 111 SUPERFAMILY SSF54292 4 109 1.66E-35 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF01493 GXGXG motif 1236 1419 5.5E-75 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 9.1E-177 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:3.60.20.10 12 437 8.6E-143 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF04898 Glutamate synthase central domain 457 737 3.4E-105 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 SUPERFAMILY SSF56235 12 429 2.74E-149 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 4.1E-158 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 SUPERFAMILY SSF51395 434 1191 1.79E-248 T 29-03-2018 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 SUPERFAMILY SSF69336 1211 1465 1.57E-88 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:3.20.20.70 438 778 5.3E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:2.160.20.60 1211 1485 4.5E-96 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM460_RS07380 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:3.20.20.70 779 1208 7.9E-145 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS01765 4781572aaf963790cf6fd00e0138473f 154 Gene3D G3DSA:3.40.930.10 2 151 3.1E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS01765 4781572aaf963790cf6fd00e0138473f 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 9.9E-34 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS01765 4781572aaf963790cf6fd00e0138473f 154 SUPERFAMILY SSF55804 7 148 1.96E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS01765 4781572aaf963790cf6fd00e0138473f 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 1848 1992 2.5E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 2130 2276 3.3E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1379 1564 8.8E-53 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1661 1844 1.2E-43 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 544 717 6.1E-51 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 811 992 7.4E-50 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1949 2128 4.8E-48 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 277 449 6.3E-46 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 2232 2400 8.4E-47 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1095 1280 7.8E-52 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 2511 2678 6.6E-40 T 29-03-2018 IPR008541 Protein of unknown function DUF823 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 468 515 5.0E-7 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 740 780 1.4E-10 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1875 1914 1.8E-14 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 2431 2475 2.6E-14 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1302 1347 9.3E-9 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 208 253 2.5E-14 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1017 1058 1.4E-13 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1589 1634 1.1E-12 T 29-03-2018 IPR008542 Protein of unknown function DUF824 AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 1294 1427 3.9E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 724 862 0.082 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 461 599 1.7E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 200 334 3.6E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 2421 2563 1.4E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 1572 1709 2.8E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11865 144b6bc9c3ca805e4d03f5db25095225 2693 Gene3D G3DSA:2.60.40.10 1005 1141 1.2E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS15800 5bff90af6815e1bc33556196ce21148c 78 Pfam PF07351 Protein of unknown function (DUF1480) 2 77 4.8E-38 T 29-03-2018 IPR009950 Protein of unknown function DUF1480 AM460_RS15800 5bff90af6815e1bc33556196ce21148c 78 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 1 78 6.0E-41 T 29-03-2018 IPR009950 Protein of unknown function DUF1480 AM460_RS02570 bc884a9dac79d3b391163523dd6611df 549 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 5.5E-78 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM460_RS02570 bc884a9dac79d3b391163523dd6611df 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.4E-255 T 29-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.4E-103 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.3E-148 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 SUPERFAMILY SSF53901 4 267 5.16E-83 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 Gene3D G3DSA:3.40.47.10 267 390 5.9E-37 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 Gene3D G3DSA:3.40.47.10 1 181 1.2E-35 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 Gene3D G3DSA:3.40.47.10 182 266 2.5E-22 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 SUPERFAMILY SSF53901 272 392 6.64E-46 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 Pfam PF02803 Thiolase, C-terminal domain 271 392 2.5E-53 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM460_RS13200 c859dd8ec07a29b53cdc803ebce15e01 394 PIRSF PIRSF000429 1 394 1.2E-134 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS05320 29c430dd5cf535f136ba806f11848cd4 657 Gene3D G3DSA:1.50.10.20 185 347 2.5E-32 T 29-03-2018 AM460_RS05320 29c430dd5cf535f136ba806f11848cd4 657 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 12 560 1.1E-171 T 29-03-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 AM460_RS05320 29c430dd5cf535f136ba806f11848cd4 657 Gene3D G3DSA:1.50.10.10 60 184 5.5E-10 T 29-03-2018 AM460_RS05320 29c430dd5cf535f136ba806f11848cd4 657 SUPERFAMILY SSF48208 15 426 4.35E-40 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM460_RS01990 7fd9360c2b37e65328cd3f220502fd9b 131 Gene3D G3DSA:1.20.1300.10 3 128 1.5E-57 T 29-03-2018 AM460_RS01990 7fd9360c2b37e65328cd3f220502fd9b 131 PIRSF PIRSF000180 2 130 5.8E-63 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM460_RS01990 7fd9360c2b37e65328cd3f220502fd9b 131 Pfam PF02300 Fumarate reductase subunit C 3 128 1.4E-56 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM460_RS01990 7fd9360c2b37e65328cd3f220502fd9b 131 SUPERFAMILY SSF81343 2 131 5.36E-59 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01990 7fd9360c2b37e65328cd3f220502fd9b 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 30.453 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM460_RS01990 7fd9360c2b37e65328cd3f220502fd9b 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 129 4.0E-56 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM460_RS00600 3a20811860fd83fc5985fe52fc54224b 245 PIRSF PIRSF003073 1 245 1.2E-35 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS00600 3a20811860fd83fc5985fe52fc54224b 245 SUPERFAMILY SSF52540 64 226 7.04E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00600 3a20811860fd83fc5985fe52fc54224b 245 Pfam PF01695 IstB-like ATP binding protein 92 218 5.0E-17 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS00600 3a20811860fd83fc5985fe52fc54224b 245 SMART SM00382 98 227 2.3E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00600 3a20811860fd83fc5985fe52fc54224b 245 Gene3D G3DSA:3.40.50.300 62 227 1.4E-18 T 29-03-2018 AM460_RS13900 39041e45d9fcaa34cde7159c7c97f247 350 SMART SM01133 68 326 5.0E-40 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS13900 39041e45d9fcaa34cde7159c7c97f247 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 1.1E-73 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS13900 39041e45d9fcaa34cde7159c7c97f247 350 Gene3D G3DSA:3.20.20.70 52 345 2.7E-65 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS13900 39041e45d9fcaa34cde7159c7c97f247 350 SUPERFAMILY SSF51569 56 242 2.05E-65 T 29-03-2018 AM460_RS13900 39041e45d9fcaa34cde7159c7c97f247 350 SUPERFAMILY SSF51569 270 344 2.05E-65 T 29-03-2018 AM460_RS03315 b96f9f4df812f7098c3310f8004ffe08 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM460_RS03315 b96f9f4df812f7098c3310f8004ffe08 765 Gene3D G3DSA:3.20.70.20 1 765 2.3E-273 T 29-03-2018 AM460_RS03315 b96f9f4df812f7098c3310f8004ffe08 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM460_RS03315 b96f9f4df812f7098c3310f8004ffe08 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 1.1E-202 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM460_RS03315 b96f9f4df812f7098c3310f8004ffe08 765 SUPERFAMILY SSF51998 1 764 2.29E-220 T 29-03-2018 AM460_RS03315 b96f9f4df812f7098c3310f8004ffe08 765 Pfam PF01228 Glycine radical 646 747 3.0E-27 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.3E-6 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 SUPERFAMILY SSF56024 273 473 9.42E-48 T 29-03-2018 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 5.4E-228 T 29-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 SUPERFAMILY SSF56024 66 315 4.08E-45 T 29-03-2018 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 SMART SM00155 399 426 8.2E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 SMART SM00155 219 246 2.1E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 Gene3D G3DSA:3.30.870.10 316 477 1.2E-27 T 29-03-2018 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.264 T 29-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 Gene3D G3DSA:3.30.870.10 102 288 5.0E-25 T 29-03-2018 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13091 PLD-like domain 134 242 1.9E-11 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS18810 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13091 PLD-like domain 331 446 9.4E-23 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS13350 c75bff5d958d3809695d48d596226a11 159 Gene3D G3DSA:2.40.50.140 27 131 1.2E-33 T 29-03-2018 AM460_RS13350 c75bff5d958d3809695d48d596226a11 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.978 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM460_RS13350 c75bff5d958d3809695d48d596226a11 159 SUPERFAMILY SSF82093 30 143 4.45E-41 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM460_RS13350 c75bff5d958d3809695d48d596226a11 159 Pfam PF03100 CcmE 4 137 6.2E-46 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 SMART SM00342 200 283 5.6E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 Gene3D G3DSA:1.10.10.60 176 233 1.3E-11 T 29-03-2018 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 SUPERFAMILY SSF46689 184 234 1.97E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 Pfam PF12833 Helix-turn-helix domain 207 284 7.0E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 Pfam PF02311 AraC-like ligand binding domain 65 129 2.5E-6 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 Gene3D G3DSA:1.10.10.60 234 287 3.6E-10 T 29-03-2018 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 SUPERFAMILY SSF46689 237 285 6.72E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS04785 d725cab77af86045c89f0c1b359c9560 288 SUPERFAMILY SSF51215 14 165 3.27E-11 T 29-03-2018 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 SUPERFAMILY SSF100879 250 346 2.09E-5 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 SUPERFAMILY SSF56672 1 237 5.07E-73 T 29-03-2018 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Pfam PF11798 IMS family HHH motif 172 200 4.4E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Gene3D G3DSA:3.30.70.270 37 115 4.0E-19 T 29-03-2018 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Gene3D G3DSA:3.30.70.270 116 173 5.9E-12 T 29-03-2018 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 351 8.4E-15 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Pfam PF13438 Domain of unknown function (DUF4113) 371 421 6.0E-22 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Gene3D G3DSA:3.30.1490.100 250 363 2.2E-24 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Gene3D G3DSA:1.10.150.20 174 249 8.7E-15 T 29-03-2018 AM460_RS19365 2c9e673ebedab74f78925e283c19e68d 422 Pfam PF00817 impB/mucB/samB family 6 150 4.8E-39 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 4.1E-48 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 4.1E-48 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 4.1E-48 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 4.1E-48 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 4.1E-48 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 4.1E-48 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 SUPERFAMILY SSF53335 92 281 7.47E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 77 9.2E-19 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 Gene3D G3DSA:1.10.155.10 16 90 2.3E-26 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 280 1.1E-62 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 SMART SM00138 24 284 1.3E-140 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 SUPERFAMILY SSF47757 14 91 4.58E-24 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 PIRSF PIRSF000410 10 285 5.3E-105 T 29-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR AM460_RS15550 04cbead5175f66d77d023953544d6a5f 286 Gene3D G3DSA:3.40.50.150 91 284 5.6E-49 T 29-03-2018 AM460_RS07185 4a51d5fae82676927325859765a63c01 348 Pfam PF14486 Domain of unknown function (DUF4432) 29 329 6.8E-105 T 29-03-2018 IPR027839 Protein of unknown function DUF4432 AM460_RS07185 4a51d5fae82676927325859765a63c01 348 Gene3D G3DSA:2.70.98.10 68 330 4.8E-14 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS12115 7e50789f2840148cffe42de3cf5b253b 278 Gene3D G3DSA:3.30.420.150 144 258 2.0E-15 T 29-03-2018 AM460_RS12115 7e50789f2840148cffe42de3cf5b253b 278 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 33 267 2.8E-111 T 29-03-2018 IPR013366 Ethanolamine utilisation EutJ AM460_RS12115 7e50789f2840148cffe42de3cf5b253b 278 Pfam PF14450 Cell division protein FtsA 141 209 1.4E-8 T 29-03-2018 AM460_RS12115 7e50789f2840148cffe42de3cf5b253b 278 SUPERFAMILY SSF53067 30 131 3.11E-9 T 29-03-2018 AM460_RS12115 7e50789f2840148cffe42de3cf5b253b 278 SUPERFAMILY SSF53067 141 260 4.54E-20 T 29-03-2018 AM460_RS12115 7e50789f2840148cffe42de3cf5b253b 278 Gene3D G3DSA:3.30.420.40 4 143 3.5E-15 T 29-03-2018 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Hamap MF_01151 Protein GrpE [grpE]. 4 194 20.664 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 173 192 1.3E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 63 79 1.3E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 146 161 1.3E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 91 106 1.3E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Pfam PF01025 GrpE 35 194 6.9E-47 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 SUPERFAMILY SSF51064 139 195 1.83E-16 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Gene3D G3DSA:2.30.22.10 138 194 2.3E-18 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 SUPERFAMILY SSF58014 42 138 1.57E-26 T 29-03-2018 AM460_RS11315 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Gene3D G3DSA:3.90.20.20 34 137 7.5E-31 T 29-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM460_RS21635 c31ca95996e34264500aef20b8770ca5 319 Pfam PF06406 StbA protein 1 316 2.1E-156 T 29-03-2018 IPR009440 Plasmid segregation protein ParM/StbA AM460_RS21635 c31ca95996e34264500aef20b8770ca5 319 Gene3D G3DSA:3.30.420.40 1 162 4.6E-29 T 29-03-2018 AM460_RS21635 c31ca95996e34264500aef20b8770ca5 319 SUPERFAMILY SSF53067 162 313 2.22E-11 T 29-03-2018 AM460_RS21635 c31ca95996e34264500aef20b8770ca5 319 Gene3D G3DSA:3.30.420.40 163 301 4.9E-6 T 29-03-2018 AM460_RS21635 c31ca95996e34264500aef20b8770ca5 319 SUPERFAMILY SSF53067 1 155 5.37E-48 T 29-03-2018 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 SUPERFAMILY SSF53901 297 434 9.93E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 Gene3D G3DSA:3.40.47.10 301 433 9.9E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 SUPERFAMILY SSF53901 15 295 7.62E-63 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 1.2E-135 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 4.2E-272 T 29-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 75.341 T 29-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.7E-60 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 Gene3D G3DSA:3.40.47.10 7 300 1.0E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 PIRSF PIRSF000429 9 436 1.5E-126 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS12630 a80d0182e250647bd02030e019d780fe 436 Pfam PF02803 Thiolase, C-terminal domain 297 434 6.4E-36 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 SMART SM00388 388 453 1.6E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 9.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 9.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 9.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 9.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 389 450 8.9E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 SUPERFAMILY SSF55785 253 367 9.77E-19 T 29-03-2018 IPR000014 PAS domain AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 SMART SM00091 262 329 1.3E-10 T 29-03-2018 IPR000014 PAS domain AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 SUPERFAMILY SSF55874 443 602 2.88E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 SUPERFAMILY SSF47384 379 452 1.51E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 Gene3D G3DSA:1.10.287.130 383 449 1.7E-16 T 29-03-2018 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 599 7.6E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 Pfam PF00989 PAS fold 265 369 1.1E-21 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 SMART SM00387 495 602 1.1E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 SMART SM00304 212 262 3.3E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 Gene3D G3DSA:3.30.565.10 453 608 5.7E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 Gene3D G3DSA:3.30.450.20 244 382 3.1E-26 T 29-03-2018 AM460_RS13225 1a1f4ab44c98755906b3711636749946 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 379 1.5E-16 T 29-03-2018 IPR000014 PAS domain AM460_RS05705 16f5ebcdfb6b1e04a925bdb770c79e83 440 Gene3D G3DSA:1.20.1250.20 235 438 8.9E-21 T 29-03-2018 AM460_RS05705 16f5ebcdfb6b1e04a925bdb770c79e83 440 SUPERFAMILY SSF103473 19 439 1.05E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS05705 16f5ebcdfb6b1e04a925bdb770c79e83 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS05705 16f5ebcdfb6b1e04a925bdb770c79e83 440 Pfam PF00083 Sugar (and other) transporter 23 232 1.7E-24 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS05705 16f5ebcdfb6b1e04a925bdb770c79e83 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 2.8E-153 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM460_RS05705 16f5ebcdfb6b1e04a925bdb770c79e83 440 Pfam PF07690 Major Facilitator Superfamily 283 435 3.2E-12 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS05705 16f5ebcdfb6b1e04a925bdb770c79e83 440 Gene3D G3DSA:1.20.1250.20 19 234 4.7E-25 T 29-03-2018 AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.4E-19 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 SUPERFAMILY SSF48498 84 200 6.43E-14 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 SUPERFAMILY SSF46689 1 68 3.64E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 8.8E-52 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AM460_RS24045 27e8f13d77a01af2c9129bf6c6703e9a 215 Gene3D G3DSA:1.10.357.10 1 212 3.1E-40 T 29-03-2018 AM460_RS16120 3b8d04b82693c4a37fc7e27dd7defe60 459 Pfam PF00083 Sugar (and other) transporter 57 451 1.3E-32 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS16120 3b8d04b82693c4a37fc7e27dd7defe60 459 Gene3D G3DSA:1.20.1250.20 249 452 3.1E-19 T 29-03-2018 AM460_RS16120 3b8d04b82693c4a37fc7e27dd7defe60 459 SUPERFAMILY SSF103473 14 449 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS16120 3b8d04b82693c4a37fc7e27dd7defe60 459 Gene3D G3DSA:1.20.1250.20 12 219 4.0E-31 T 29-03-2018 AM460_RS01740 eb3b97ed13530ca6568258f44c46e3b4 131 Gene3D G3DSA:3.30.70.60 1 100 3.5E-31 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AM460_RS01740 eb3b97ed13530ca6568258f44c46e3b4 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 29-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM460_RS01740 eb3b97ed13530ca6568258f44c46e3b4 131 Pfam PF01250 Ribosomal protein S6 3 91 3.7E-28 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01740 eb3b97ed13530ca6568258f44c46e3b4 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.3E-39 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01740 eb3b97ed13530ca6568258f44c46e3b4 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.683 T 29-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM460_RS01740 eb3b97ed13530ca6568258f44c46e3b4 131 SUPERFAMILY SSF54995 1 103 1.02E-37 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06800 6df3ee6a7047a2c561886b44e5f58fb6 271 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 17 256 1.1E-85 T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AM460_RS06800 6df3ee6a7047a2c561886b44e5f58fb6 271 SUPERFAMILY SSF50156 167 254 1.8E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS06800 6df3ee6a7047a2c561886b44e5f58fb6 271 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 194 220 - T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AM460_RS06800 6df3ee6a7047a2c561886b44e5f58fb6 271 Gene3D G3DSA:2.30.42.10 81 263 2.5E-7 T 29-03-2018 AM460_RS06800 6df3ee6a7047a2c561886b44e5f58fb6 271 Pfam PF11356 Type II secretion system protein C 77 152 9.3E-8 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal AM460_RS17705 44b7cbc1371923af4e1a17ad6e8e5812 178 SUPERFAMILY SSF47413 4 71 1.39E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS17705 44b7cbc1371923af4e1a17ad6e8e5812 178 Gene3D G3DSA:1.10.260.40 1 83 4.6E-16 T 29-03-2018 AM460_RS17705 44b7cbc1371923af4e1a17ad6e8e5812 178 Gene3D G3DSA:2.60.120.10 84 178 2.2E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS17705 44b7cbc1371923af4e1a17ad6e8e5812 178 SMART SM00530 11 66 1.2E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS17705 44b7cbc1371923af4e1a17ad6e8e5812 178 Pfam PF01381 Helix-turn-helix 12 64 1.0E-16 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS17705 44b7cbc1371923af4e1a17ad6e8e5812 178 SUPERFAMILY SSF51182 51 176 2.51E-23 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS17705 44b7cbc1371923af4e1a17ad6e8e5812 178 Pfam PF07883 Cupin domain 104 171 6.5E-10 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 SUPERFAMILY SSF46609 1 84 2.88E-36 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 PIRSF PIRSF000349 1 193 5.9E-87 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 3.7E-40 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.7E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 Gene3D G3DSA:1.10.287.990 20 82 2.8E-28 T 29-03-2018 AM460_RS16780 f8104f8d9f2322275e71bbbc0dc9f190 193 SUPERFAMILY SSF54719 84 192 2.23E-45 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 SMART SM00829 6 344 1.4E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 Pfam PF00107 Zinc-binding dehydrogenase 172 305 2.2E-21 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 Gene3D G3DSA:3.90.180.10 1 153 2.6E-40 T 29-03-2018 AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 Gene3D G3DSA:3.40.50.720 154 320 1.2E-22 T 29-03-2018 AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 SUPERFAMILY SSF51735 138 314 1.16E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 SUPERFAMILY SSF50129 1 170 7.32E-45 T 29-03-2018 IPR011032 GroES-like AM460_RS13935 169d54627348798b263f6b2cac064d5c 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 5.8E-29 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS24545 181464f6ebce4537362128cc63dc0151 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 240 7.8E-27 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM460_RS24545 181464f6ebce4537362128cc63dc0151 320 SUPERFAMILY SSF53850 34 307 1.17E-46 T 29-03-2018 AM460_RS24545 181464f6ebce4537362128cc63dc0151 320 SMART SM00062 24 239 1.4E-29 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS24545 181464f6ebce4537362128cc63dc0151 320 Gene3D G3DSA:3.40.190.10 20 119 4.7E-11 T 29-03-2018 AM460_RS24545 181464f6ebce4537362128cc63dc0151 320 Gene3D G3DSA:3.40.190.10 120 320 9.9E-40 T 29-03-2018 AM460_RS24545 181464f6ebce4537362128cc63dc0151 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 8.6E-161 T 29-03-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 AM460_RS12660 2f3ef7c78a488bdfc86c67b1bdfbd99f 163 Pfam PF00419 Fimbrial protein 27 163 1.8E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12660 2f3ef7c78a488bdfc86c67b1bdfbd99f 163 Gene3D G3DSA:2.60.40.1090 40 163 5.1E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12660 2f3ef7c78a488bdfc86c67b1bdfbd99f 163 SUPERFAMILY SSF49401 37 163 8.45E-26 T 29-03-2018 IPR008966 Adhesion domain AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 SUPERFAMILY SSF49303 221 333 1.06E-25 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Gene3D G3DSA:3.20.20.80 335 625 5.8E-88 T 29-03-2018 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Hamap MF_01687 Beta-galactosidase [lacZ]. 6 1024 17.674 T 29-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 SUPERFAMILY SSF49785 15 219 2.83E-70 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 52 219 7.5E-75 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Gene3D G3DSA:2.60.120.260 3 219 8.4E-68 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 SMART SM01038 749 1022 2.4E-112 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Gene3D G3DSA:2.60.40.10 626 731 1.3E-25 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 SUPERFAMILY SSF49303 622 727 1.2E-31 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 448 462 - T 29-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 1.4E-124 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Pfam PF00703 Glycosyl hydrolases family 2 222 333 8.9E-14 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 SUPERFAMILY SSF51445 335 625 1.91E-104 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 29-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 6.1E-39 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 6.1E-39 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 6.1E-39 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 6.1E-39 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 6.1E-39 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Pfam PF16353 Domain of unknown function(DUF4981) 637 723 2.6E-18 T 29-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Pfam PF02929 Beta galactosidase small chain 754 1020 2.5E-59 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Gene3D G3DSA:2.70.98.10 732 1024 1.9E-75 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 SUPERFAMILY SSF74650 735 1022 1.57E-94 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS24620 2af73151877e2d5fcd8c4a7a73ae07b0 1024 Gene3D G3DSA:2.60.40.10 220 333 1.4E-19 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS02470 8fab423b4d3df6c9b5c6273478c06404 278 Gene3D G3DSA:3.40.50.300 1 273 4.7E-56 T 29-03-2018 AM460_RS02470 8fab423b4d3df6c9b5c6273478c06404 278 SMART SM00382 29 226 2.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02470 8fab423b4d3df6c9b5c6273478c06404 278 SUPERFAMILY SSF52540 5 236 9.16E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02470 8fab423b4d3df6c9b5c6273478c06404 278 Pfam PF00005 ABC transporter 22 177 4.8E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS17210 99af8c7b0164c2cc7659ab275e00659c 455 Gene3D G3DSA:1.20.1250.20 13 229 7.0E-24 T 29-03-2018 AM460_RS17210 99af8c7b0164c2cc7659ab275e00659c 455 Pfam PF07690 Major Facilitator Superfamily 284 432 6.2E-11 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS17210 99af8c7b0164c2cc7659ab275e00659c 455 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 23 418 2.6E-139 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM460_RS17210 99af8c7b0164c2cc7659ab275e00659c 455 Gene3D G3DSA:1.20.1250.20 236 442 2.5E-19 T 29-03-2018 AM460_RS17210 99af8c7b0164c2cc7659ab275e00659c 455 Pfam PF00083 Sugar (and other) transporter 57 219 4.6E-21 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS17210 99af8c7b0164c2cc7659ab275e00659c 455 SUPERFAMILY SSF103473 15 433 1.31E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 SUPERFAMILY SSF53697 245 609 1.16E-114 T 29-03-2018 AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.2E-271 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 Pfam PF13522 Glutamine amidotransferase domain 65 182 6.3E-22 T 29-03-2018 AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 Gene3D G3DSA:3.40.50.10490 458 607 4.0E-52 T 29-03-2018 AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 Pfam PF01380 SIS domain 462 591 4.8E-31 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 Pfam PF01380 SIS domain 289 418 2.2E-34 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.615 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 SUPERFAMILY SSF56235 2 232 1.03E-75 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 Gene3D G3DSA:3.60.20.10 2 239 1.1E-69 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS04550 8eb8a531f4114f63cd42e84dd39b2cf4 609 Gene3D G3DSA:3.40.50.10490 240 457 4.5E-59 T 29-03-2018 AM460_RS16495 29dd8392bacfe3b44345bff916e39872 478 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 450 1.1E-156 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 AM460_RS16495 29dd8392bacfe3b44345bff916e39872 478 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 464 46.59 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 AM460_RS06225 dc51984d80554aca95c9f299030edaaf 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 191 3.9E-31 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM460_RS06225 dc51984d80554aca95c9f299030edaaf 197 Pfam PF01914 MarC family integral membrane protein 1 195 2.5E-65 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 Gene3D G3DSA:3.20.20.450 406 657 3.8E-82 T 29-03-2018 IPR001633 EAL domain AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 Pfam PF00563 EAL domain 415 648 2.6E-60 T 29-03-2018 IPR001633 EAL domain AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 SMART SM00052 408 653 2.9E-115 T 29-03-2018 IPR001633 EAL domain AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 SMART SM00267 231 398 1.5E-40 T 29-03-2018 IPR000160 GGDEF domain AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 Pfam PF00672 HAMP domain 180 232 3.5E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 155 2.6E-49 T 29-03-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 394 2.7E-11 T 29-03-2018 IPR000160 GGDEF domain AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 Gene3D G3DSA:3.30.70.270 241 405 3.3E-22 T 29-03-2018 AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 SUPERFAMILY SSF55073 248 400 1.65E-17 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS05660 387e55d30bc9314d6309a549a1a926a4 662 SUPERFAMILY SSF141868 413 658 3.53E-73 T 29-03-2018 IPR001633 EAL domain AM460_RS21900 4356470879b8f8639b053773b391ff53 371 Gene3D G3DSA:1.20.1600.10 36 307 2.0E-35 T 29-03-2018 AM460_RS21900 4356470879b8f8639b053773b391ff53 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 5.2E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS21900 4356470879b8f8639b053773b391ff53 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 362 6.0E-58 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS21900 4356470879b8f8639b053773b391ff53 371 SUPERFAMILY SSF111369 52 299 1.1E-27 T 29-03-2018 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 SUPERFAMILY SSF53613 7 307 4.68E-86 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 3.8E-78 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 PRINTS PR00990 Ribokinase signature 36 55 9.0E-38 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 PRINTS PR00990 Ribokinase signature 220 231 9.0E-38 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 PRINTS PR00990 Ribokinase signature 9 30 9.0E-38 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 PRINTS PR00990 Ribokinase signature 108 121 9.0E-38 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 PRINTS PR00990 Ribokinase signature 176 191 9.0E-38 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 Gene3D G3DSA:3.40.1190.20 1 309 1.2E-86 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 Hamap MF_01987 Ribokinase [rbsK]. 5 304 26.175 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 1.3E-108 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM460_RS04430 7a738b7b42aeed6fb12c91bd17abe956 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS23090 aa1850cecd91c93819fdbe80fd300530 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.498 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM460_RS23090 aa1850cecd91c93819fdbe80fd300530 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 7.5E-39 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM460_RS23090 aa1850cecd91c93819fdbe80fd300530 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 29-03-2018 IPR020549 Endoribonuclease YbeY, conserved site AM460_RS23090 aa1850cecd91c93819fdbe80fd300530 155 SUPERFAMILY SSF55486 3 151 3.17E-50 T 29-03-2018 AM460_RS23090 aa1850cecd91c93819fdbe80fd300530 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.9E-37 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM460_RS23090 aa1850cecd91c93819fdbe80fd300530 155 Gene3D G3DSA:3.40.390.30 1 155 3.3E-55 T 29-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AM460_RS23530 2db1077f33344acba55d05326a397132 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 320 4.9E-44 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS23530 2db1077f33344acba55d05326a397132 355 Gene3D G3DSA:1.10.3470.10 31 325 1.2E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS05645 d17ee665f5898e116953a688159592ee 779 PRINTS PR01440 Cellulose synthase subunit B signature 100 121 1.8E-32 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM460_RS05645 d17ee665f5898e116953a688159592ee 779 PRINTS PR01440 Cellulose synthase subunit B signature 190 211 1.8E-32 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM460_RS05645 d17ee665f5898e116953a688159592ee 779 PRINTS PR01440 Cellulose synthase subunit B signature 566 586 1.8E-32 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM460_RS05645 d17ee665f5898e116953a688159592ee 779 PRINTS PR01440 Cellulose synthase subunit B signature 232 255 1.8E-32 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM460_RS05645 d17ee665f5898e116953a688159592ee 779 PRINTS PR01440 Cellulose synthase subunit B signature 313 334 1.8E-32 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM460_RS05645 d17ee665f5898e116953a688159592ee 779 PRINTS PR01440 Cellulose synthase subunit B signature 529 548 1.8E-32 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM460_RS05645 d17ee665f5898e116953a688159592ee 779 PRINTS PR01440 Cellulose synthase subunit B signature 396 417 1.8E-32 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM460_RS05645 d17ee665f5898e116953a688159592ee 779 Pfam PF03170 Bacterial cellulose synthase subunit 71 680 1.1E-223 T 29-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.255 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 3.9E-50 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 Gene3D G3DSA:1.10.520.20 2 106 5.7E-28 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 SUPERFAMILY SSF47928 3 102 1.14E-27 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 29-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04515 9493d28b2334a35fbf3a5971f94c0d6b 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.6E-67 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS07620 3bd4474276d81e34a5f41940e5023c8f 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.311 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM460_RS07620 3bd4474276d81e34a5f41940e5023c8f 133 SUPERFAMILY SSF89919 2 107 4.97E-36 T 29-03-2018 IPR023799 Ribosome-binding factor A domain AM460_RS07620 3bd4474276d81e34a5f41940e5023c8f 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 9.0E-48 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM460_RS07620 3bd4474276d81e34a5f41940e5023c8f 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 2.4E-45 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM460_RS07620 3bd4474276d81e34a5f41940e5023c8f 133 Gene3D G3DSA:3.30.300.20 1 106 5.5E-36 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS07620 3bd4474276d81e34a5f41940e5023c8f 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.8E-33 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM460_RS07620 3bd4474276d81e34a5f41940e5023c8f 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 29-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 SUPERFAMILY SSF52440 1 113 1.22E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS07190 da487e692106172a76b783ffb4f52120 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 SUPERFAMILY SSF56059 83 347 2.47E-69 T 29-03-2018 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 Gene3D G3DSA:3.30.470.20 211 444 3.4E-96 T 29-03-2018 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.3E-86 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 SMART SM00878 336 441 4.2E-65 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 Gene3D G3DSA:3.30.1490.20 124 210 1.8E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 Gene3D G3DSA:3.40.50.20 1 123 1.3E-51 T 29-03-2018 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.2E-44 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 2.1E-252 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 SUPERFAMILY SSF51246 331 444 6.28E-44 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM460_RS07190 da487e692106172a76b783ffb4f52120 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.7E-38 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM460_RS14375 7cdcde1a22b0e06809ff7ef0cc621799 794 Gene3D G3DSA:3.40.50.300 42 601 1.4E-29 T 29-03-2018 AM460_RS14375 7cdcde1a22b0e06809ff7ef0cc621799 794 SUPERFAMILY SSF52540 50 122 3.37E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14375 7cdcde1a22b0e06809ff7ef0cc621799 794 SUPERFAMILY SSF52540 200 338 3.37E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14375 7cdcde1a22b0e06809ff7ef0cc621799 794 Pfam PF00350 Dynamin family 71 299 7.7E-18 T 29-03-2018 IPR022812 Dynamin superfamily AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 58.486 T 29-03-2018 IPR023018 Transport protein YidE, putative AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 4.5E-52 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 5.5E-38 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 Gene3D G3DSA:3.30.70.1450 190 279 2.5E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 SUPERFAMILY SSF116726 206 271 2.09E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 SUPERFAMILY SSF116726 286 360 2.09E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF02080 TrkA-C domain 291 360 2.9E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF02080 TrkA-C domain 212 270 5.4E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 Gene3D G3DSA:3.30.70.1450 280 366 5.5E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 4.4E-47 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS04780 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 4.6E-41 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS22930 fb5cad1bdf5c957282b288c2e61ba77c 148 Gene3D G3DSA:1.10.10.10 4 88 1.3E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22930 fb5cad1bdf5c957282b288c2e61ba77c 148 SUPERFAMILY SSF46785 6 134 1.76E-45 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22930 fb5cad1bdf5c957282b288c2e61ba77c 148 Pfam PF01475 Ferric uptake regulator family 10 130 7.0E-49 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM460_RS06085 37921dab3e2edc0b45927b528e3c125e 222 SMART SM00382 27 214 2.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06085 37921dab3e2edc0b45927b528e3c125e 222 SUPERFAMILY SSF52540 1 216 1.86E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06085 37921dab3e2edc0b45927b528e3c125e 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 6.3E-94 T 29-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AM460_RS06085 37921dab3e2edc0b45927b528e3c125e 222 Gene3D G3DSA:3.40.50.300 1 220 6.5E-62 T 29-03-2018 AM460_RS06085 37921dab3e2edc0b45927b528e3c125e 222 Pfam PF00005 ABC transporter 18 165 1.6E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS06085 37921dab3e2edc0b45927b528e3c125e 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50346 106 182 1.63E-19 T 29-03-2018 IPR011033 PRC-barrel-like AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.30.30.240 102 177 6.1E-23 T 29-03-2018 AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.40.30.60 12 100 1.1E-27 T 29-03-2018 IPR002676 RimM protein GO:0006364 AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF05239 PRC-barrel domain 104 177 1.7E-9 T 29-03-2018 IPR027275 PRC-barrel domain AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 8.9E-63 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF01782 RimM N-terminal domain 16 96 5.7E-27 T 29-03-2018 IPR002676 RimM protein GO:0006364 AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.865 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM460_RS11340 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50447 12 100 4.59E-25 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS11105 9f8b6c23b34cf45e9bcf77397c8fb8d2 269 SMART SM01252 8 111 9.4E-37 T 29-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding AM460_RS11105 9f8b6c23b34cf45e9bcf77397c8fb8d2 269 Pfam PF04383 KilA-N domain 8 108 5.1E-24 T 29-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding AM460_RS11140 3cb2aba1e5eca269d0961c6aa811b13f 165 Pfam PF00959 Phage lysozyme 48 154 6.5E-32 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM460_RS11140 3cb2aba1e5eca269d0961c6aa811b13f 165 Gene3D G3DSA:1.10.530.40 1 165 9.6E-55 T 29-03-2018 IPR023347 Lysozyme domain GO:0003796 AM460_RS11140 3cb2aba1e5eca269d0961c6aa811b13f 165 SUPERFAMILY SSF53955 19 163 2.46E-54 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS03620 535ccdf4abbffea4e0332c69100fa635 72 Gene3D G3DSA:1.10.1220.10 1 53 8.3E-12 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Gene3D G3DSA:3.30.565.10 361 524 1.8E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 2.2E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Gene3D G3DSA:3.40.50.2300 659 788 2.2E-35 T 29-03-2018 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SMART SM00304 200 252 1.7E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Pfam PF00072 Response regulator receiver domain 670 780 3.5E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SMART SM00388 292 357 1.2E-25 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SMART SM00387 404 520 4.0E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Gene3D G3DSA:1.10.287.130 282 353 1.9E-20 T 29-03-2018 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SMART SM00448 668 781 4.9E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 4.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 4.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 4.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 4.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Gene3D G3DSA:1.20.120.160 805 918 4.0E-19 T 29-03-2018 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SMART SM00073 819 914 1.6E-23 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SUPERFAMILY SSF158472 200 249 7.45E-5 T 29-03-2018 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SUPERFAMILY SSF47226 764 777 7.33E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SUPERFAMILY SSF47226 808 909 7.33E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SUPERFAMILY SSF47384 277 358 1.96E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 1.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SUPERFAMILY SSF52172 668 785 3.7E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 SUPERFAMILY SSF55874 346 516 1.44E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 1.9E-54 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal AM460_RS10340 d4d49c78ce0f5040df94ae7f59f01870 918 Pfam PF01627 Hpt domain 828 908 1.3E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 Pfam PF00005 ABC transporter 21 162 8.8E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 SUPERFAMILY SSF52540 4 243 2.8E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 Gene3D G3DSA:3.40.50.300 1 237 3.0E-70 T 29-03-2018 AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 Pfam PF08402 TOBE domain 281 351 1.2E-8 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 SMART SM00382 29 219 3.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 SUPERFAMILY SSF50331 237 359 7.05E-28 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 Gene3D G3DSA:2.40.50.100 240 293 2.7E-11 T 29-03-2018 AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS18045 6d27922d0bb36d85b7efd23e7fbf2692 360 Gene3D G3DSA:2.40.50.140 294 344 2.1E-12 T 29-03-2018 AM460_RS02205 7d1a88b095b80496a6d16a9d46c36d98 446 PIRSF PIRSF004539 1 444 5.7E-197 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM460_RS02205 7d1a88b095b80496a6d16a9d46c36d98 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 2.3E-149 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM460_RS02205 7d1a88b095b80496a6d16a9d46c36d98 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 2.0E-203 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM460_RS04750 3467fb6457d6458f5fe7b7eeca1a73f4 430 Gene3D G3DSA:1.20.1250.20 219 429 8.1E-26 T 29-03-2018 AM460_RS04750 3467fb6457d6458f5fe7b7eeca1a73f4 430 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 22 405 5.2E-134 T 29-03-2018 AM460_RS04750 3467fb6457d6458f5fe7b7eeca1a73f4 430 Gene3D G3DSA:1.20.1250.20 7 207 2.3E-37 T 29-03-2018 AM460_RS04750 3467fb6457d6458f5fe7b7eeca1a73f4 430 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 23 423 3.4E-149 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS04750 3467fb6457d6458f5fe7b7eeca1a73f4 430 SUPERFAMILY SSF103473 7 426 1.83E-83 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04750 3467fb6457d6458f5fe7b7eeca1a73f4 430 Pfam PF07690 Major Facilitator Superfamily 21 389 7.8E-56 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 SUPERFAMILY SSF55804 689 828 1.22E-29 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 363 653 4.8E-114 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Gene3D G3DSA:3.40.930.10 684 831 1.5E-31 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 689 829 9.1E-31 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Gene3D G3DSA:3.50.30.10 256 389 8.0E-21 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 559 577 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Pfam PF05524 PEP-utilising enzyme, N-terminal 142 237 2.8E-10 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Pfam PF00381 PTS HPr component phosphorylation site 7 84 1.1E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 296 307 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Gene3D G3DSA:3.20.20.60 426 655 2.0E-66 T 29-03-2018 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 SUPERFAMILY SSF52009 236 355 1.44E-24 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Gene3D G3DSA:3.30.1340.10 4 90 3.5E-13 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 SUPERFAMILY SSF55594 5 89 1.96E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 SUPERFAMILY SSF51621 366 661 9.42E-98 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 677 1.4E-144 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 264 337 1.4E-15 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Gene3D G3DSA:3.20.20.60 390 425 1.4E-8 T 29-03-2018 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 Gene3D G3DSA:1.10.274.10 145 255 4.9E-18 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 559 574 3.2E-20 T 29-03-2018 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 624 3.2E-20 T 29-03-2018 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 591 3.2E-20 T 29-03-2018 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 405 424 3.2E-20 T 29-03-2018 AM460_RS03330 15f98aeaf6091d84c6ee73f31e827df7 833 SUPERFAMILY SSF47831 147 254 1.19E-17 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS13580 f0376f6ba456a486af3975f327bd9818 278 Pfam PF00756 Putative esterase 21 271 9.5E-73 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM460_RS13580 f0376f6ba456a486af3975f327bd9818 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 275 9.0E-118 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AM460_RS13580 f0376f6ba456a486af3975f327bd9818 278 SUPERFAMILY SSF53474 1 276 5.13E-90 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS13580 f0376f6ba456a486af3975f327bd9818 278 Gene3D G3DSA:3.40.50.1820 1 277 1.9E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SUPERFAMILY SSF81886 620 840 2.35E-85 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SUPERFAMILY SSF81886 877 889 2.35E-85 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SMART SM00957 6 402 0.0 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.4E-39 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Gene3D G3DSA:3.40.50.300 9 267 4.6E-57 T 29-03-2018 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Gene3D G3DSA:3.40.50.300 301 416 2.9E-8 T 29-03-2018 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Gene3D G3DSA:3.10.450.50 733 901 3.3E-56 T 29-03-2018 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Pfam PF07517 SecA DEAD-like domain 7 402 1.7E-131 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Gene3D G3DSA:1.10.3060.10 635 732 4.0E-29 T 29-03-2018 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SMART SM00958 228 358 5.0E-84 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SUPERFAMILY SSF52540 368 415 1.96E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SUPERFAMILY SSF52540 5 228 1.96E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 PRINTS PR00906 SecA protein signature 170 190 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 PRINTS PR00906 SecA protein signature 376 393 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 PRINTS PR00906 SecA protein signature 63 87 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 PRINTS PR00906 SecA protein signature 101 115 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 PRINTS PR00906 SecA protein signature 339 361 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 PRINTS PR00906 SecA protein signature 413 426 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 PRINTS PR00906 SecA protein signature 117 127 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Gene3D G3DSA:3.40.50.300 417 634 3.1E-54 T 29-03-2018 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 29-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.958 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SUPERFAMILY SSF52540 416 618 2.3E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 SUPERFAMILY SSF81767 227 368 4.58E-44 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.0E-68 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM460_RS25890 e785c0b03c1edb43ee323e0cc578f22a 901 Pfam PF02810 SEC-C motif 881 899 1.1E-10 T 29-03-2018 IPR004027 SEC-C motif AM460_RS13850 deff73d1b3ea7c1bcd54d5fb8897eba4 112 Gene3D G3DSA:3.10.450.160 30 108 3.1E-13 T 29-03-2018 AM460_RS13850 deff73d1b3ea7c1bcd54d5fb8897eba4 112 Pfam PF11776 Nickel/cobalt transporter regulator 52 101 3.9E-19 T 29-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AM460_RS13850 deff73d1b3ea7c1bcd54d5fb8897eba4 112 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 27 101 6.0E-40 T 29-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 143 2.4E-32 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 Gene3D G3DSA:2.60.40.10 25 141 1.0E-29 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 PRINTS PR00969 Pili chaperone signature 25 34 7.0E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 PRINTS PR00969 Pili chaperone signature 98 115 7.0E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 PRINTS PR00969 Pili chaperone signature 162 177 7.0E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 PRINTS PR00969 Pili chaperone signature 70 91 7.0E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 PRINTS PR00969 Pili chaperone signature 125 140 7.0E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 223 2.7E-15 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 Gene3D G3DSA:2.60.40.10 147 230 4.2E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 SUPERFAMILY SSF49354 22 143 6.8E-33 T 29-03-2018 IPR008962 PapD-like AM460_RS02170 87e640df5950c18522b5254f0ad9e4a5 230 SUPERFAMILY SSF49584 148 225 1.57E-20 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 Gene3D G3DSA:1.10.10.10 5 86 1.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 SUPERFAMILY SSF46785 5 109 8.65E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 Gene3D G3DSA:3.40.190.10 183 267 3.2E-9 T 29-03-2018 AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 SUPERFAMILY SSF53850 96 295 1.56E-29 T 29-03-2018 AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 Gene3D G3DSA:3.40.190.10 94 182 4.1E-12 T 29-03-2018 AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS07850 d97b6443a6395daa1c23d68843679b33 309 Pfam PF03466 LysR substrate binding domain 95 293 3.4E-31 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS25350 a5e1a449c296823cae8218529b66f143 181 SUPERFAMILY SSF52980 4 178 8.58E-70 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS25350 a5e1a449c296823cae8218529b66f143 181 Gene3D G3DSA:3.10.640.10 2 177 9.4E-75 T 29-03-2018 AM460_RS25350 a5e1a449c296823cae8218529b66f143 181 SMART SM01322 1 176 2.4E-111 T 29-03-2018 IPR009822 YaeQ AM460_RS25350 a5e1a449c296823cae8218529b66f143 181 Pfam PF07152 YaeQ protein 1 173 3.2E-72 T 29-03-2018 IPR009822 YaeQ AM460_RS25350 a5e1a449c296823cae8218529b66f143 181 PIRSF PIRSF011484 1 180 7.6E-66 T 29-03-2018 IPR009822 YaeQ AM460_RS20075 5c4ade0f227cfdfaf3d109d9167d7411 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 29-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM460_RS20075 5c4ade0f227cfdfaf3d109d9167d7411 213 Gene3D G3DSA:3.40.50.300 1 212 4.3E-49 T 29-03-2018 AM460_RS20075 5c4ade0f227cfdfaf3d109d9167d7411 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.446 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM460_RS20075 5c4ade0f227cfdfaf3d109d9167d7411 213 Pfam PF02223 Thymidylate kinase 8 200 6.0E-61 T 29-03-2018 AM460_RS20075 5c4ade0f227cfdfaf3d109d9167d7411 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 2.5E-70 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM460_RS20075 5c4ade0f227cfdfaf3d109d9167d7411 213 SUPERFAMILY SSF52540 1 209 6.28E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06910 f3f9af9f0f3baa9ec3319b1573a90dfc 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.6E-28 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06910 f3f9af9f0f3baa9ec3319b1573a90dfc 59 PIRSF PIRSF002211 1 59 7.9E-30 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06910 f3f9af9f0f3baa9ec3319b1573a90dfc 59 SUPERFAMILY SSF55129 3 59 3.01E-21 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM460_RS06910 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.049 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06910 f3f9af9f0f3baa9ec3319b1573a90dfc 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 29-03-2018 IPR018038 Ribosomal protein L30, conserved site AM460_RS06910 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 2.9E-19 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM460_RS06910 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Gene3D G3DSA:3.30.1390.20 5 59 6.6E-24 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM460_RS15505 a28f090280a960fd6296afde21121def 142 Pfam PF00582 Universal stress protein family 3 138 3.7E-16 T 29-03-2018 IPR006016 UspA GO:0006950 AM460_RS15505 a28f090280a960fd6296afde21121def 142 Gene3D G3DSA:3.40.50.620 2 140 8.3E-21 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS15505 a28f090280a960fd6296afde21121def 142 PIRSF PIRSF006276 1 141 9.0E-45 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS15505 a28f090280a960fd6296afde21121def 142 SUPERFAMILY SSF52402 3 138 5.27E-25 T 29-03-2018 AM460_RS06860 a7d6f728c27ff151616ca9b508e75108 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 29-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06860 a7d6f728c27ff151616ca9b508e75108 63 SUPERFAMILY SSF46561 1 61 6.41E-22 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06860 a7d6f728c27ff151616ca9b508e75108 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.555 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06860 a7d6f728c27ff151616ca9b508e75108 63 Gene3D G3DSA:1.10.287.310 1 63 5.2E-23 T 29-03-2018 AM460_RS06860 a7d6f728c27ff151616ca9b508e75108 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.3E-22 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06860 a7d6f728c27ff151616ca9b508e75108 63 Pfam PF00831 Ribosomal L29 protein 4 60 6.4E-23 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS23720 23739e0d7ba81c082008c3a9a94bcc78 169 Pfam PF00731 AIR carboxylase 9 157 9.1E-64 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM460_RS23720 23739e0d7ba81c082008c3a9a94bcc78 169 PIRSF PIRSF001338 5 166 2.4E-67 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AM460_RS23720 23739e0d7ba81c082008c3a9a94bcc78 169 SUPERFAMILY SSF52255 7 165 3.4E-67 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM460_RS23720 23739e0d7ba81c082008c3a9a94bcc78 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 2.2E-66 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM460_RS23720 23739e0d7ba81c082008c3a9a94bcc78 169 Gene3D G3DSA:3.40.50.7700 1 165 6.4E-66 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM460_RS23720 23739e0d7ba81c082008c3a9a94bcc78 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.41 T 29-03-2018 IPR033747 Class I PurE AM460_RS23720 23739e0d7ba81c082008c3a9a94bcc78 169 SMART SM01001 8 159 1.3E-103 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM460_RS01580 ef23aa39d7fa5e452a998421f0e9cd7d 113 SUPERFAMILY SSF110857 1 110 7.85E-35 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AM460_RS01580 ef23aa39d7fa5e452a998421f0e9cd7d 113 Gene3D G3DSA:3.10.490.10 1 111 9.9E-30 T 29-03-2018 AM460_RS01580 ef23aa39d7fa5e452a998421f0e9cd7d 113 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 6.6E-25 T 29-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AM460_RS05475 bd9d6ec9b80179573df56808ef873e49 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 46 6.0E-20 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS05475 bd9d6ec9b80179573df56808ef873e49 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS05475 bd9d6ec9b80179573df56808ef873e49 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 1.8E-13 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS05475 bd9d6ec9b80179573df56808ef873e49 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 1.8E-13 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS05475 bd9d6ec9b80179573df56808ef873e49 50 Pfam PF01848 Hok/gef family 5 46 4.1E-23 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 Gene3D G3DSA:1.10.8.60 317 409 3.5E-34 T 29-03-2018 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 7.3E-217 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 SUPERFAMILY SSF52540 64 403 1.19E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 8.6E-49 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 29-03-2018 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 SMART SM00382 111 333 1.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 SMART SM01086 317 412 4.8E-36 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 Gene3D G3DSA:3.40.50.300 56 315 9.5E-69 T 29-03-2018 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 SMART SM00994 12 51 1.0E-24 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 1.7E-17 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS24175 aec4a06588d8448da14c20763d1b1704 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.718 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 Pfam PF00873 AcrB/AcrD/AcrF family 6 1037 2.0E-238 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 Gene3D G3DSA:3.30.70.1430 45 137 4.1E-21 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 SUPERFAMILY SSF82693 46 126 2.2E-20 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 Gene3D G3DSA:3.30.2090.10 723 809 1.4E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 SUPERFAMILY SSF82866 806 1039 1.83E-44 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1047 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.1E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.1E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.1E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.1E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 Gene3D G3DSA:1.20.1640.10 824 1047 3.5E-32 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 Gene3D G3DSA:1.20.1640.10 287 516 3.2E-45 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 SUPERFAMILY SSF82714 186 269 1.7E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 SUPERFAMILY SSF82714 723 808 9.16E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 Gene3D G3DSA:3.30.2090.10 183 271 1.5E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 SUPERFAMILY SSF82693 271 328 1.39E-21 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 SUPERFAMILY SSF82693 137 184 1.39E-21 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 Gene3D G3DSA:3.30.70.1430 567 665 1.5E-7 T 29-03-2018 AM460_RS23595 e1aed65117a494d54d6d9897f914cb9a 1047 SUPERFAMILY SSF82866 294 506 5.89E-41 T 29-03-2018 AM460_RS19010 391ba96281ac0e1a17c55f5bfdac2884 269 Pfam PF13371 Tetratricopeptide repeat 187 259 3.1E-26 T 29-03-2018 AM460_RS19010 391ba96281ac0e1a17c55f5bfdac2884 269 Gene3D G3DSA:1.25.40.120 168 263 8.0E-5 T 29-03-2018 AM460_RS19010 391ba96281ac0e1a17c55f5bfdac2884 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.3E-39 T 29-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 Gene3D G3DSA:3.30.565.10 194 349 3.1E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 SMART SM00388 129 194 2.5E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 SMART SM00091 7 75 4.0E-8 T 29-03-2018 IPR000014 PAS domain AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 SUPERFAMILY SSF55785 11 104 9.18E-7 T 29-03-2018 IPR000014 PAS domain AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 Gene3D G3DSA:1.10.287.130 118 187 1.2E-13 T 29-03-2018 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 SMART SM00387 233 349 1.2E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 SUPERFAMILY SSF55874 198 346 3.67E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 Gene3D G3DSA:3.30.450.20 9 106 1.4E-10 T 29-03-2018 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 Pfam PF00989 PAS fold 11 99 2.9E-7 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.0E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 3.7E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 SUPERFAMILY SSF47384 121 186 3.53E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03745 b344b6a785d06cbd292c775fb8a0be84 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13730 bca39910ca4f4b9daf2b59bd15852563 308 SUPERFAMILY SSF54631 264 306 4.98E-6 T 29-03-2018 AM460_RS13730 bca39910ca4f4b9daf2b59bd15852563 308 Gene3D G3DSA:3.10.580.10 261 308 2.1E-5 T 29-03-2018 AM460_RS13730 bca39910ca4f4b9daf2b59bd15852563 308 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS13730 bca39910ca4f4b9daf2b59bd15852563 308 SMART SM00382 26 212 1.8E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13730 bca39910ca4f4b9daf2b59bd15852563 308 Pfam PF00005 ABC transporter 18 162 7.0E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS13730 bca39910ca4f4b9daf2b59bd15852563 308 Gene3D G3DSA:3.40.50.300 1 260 2.7E-71 T 29-03-2018 AM460_RS13730 bca39910ca4f4b9daf2b59bd15852563 308 SUPERFAMILY SSF52540 1 239 6.69E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.6E-37 T 29-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 Pfam PF00462 Glutaredoxin 4 63 3.2E-24 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 46 59 3.7E-18 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 4 22 3.7E-18 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 60 73 3.7E-18 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 SUPERFAMILY SSF52833 1 83 5.62E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS05200 e8c576ae9b777b43591ed7dca04bcfd9 83 Gene3D G3DSA:3.40.30.10 2 83 5.4E-28 T 29-03-2018 AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 Gene3D G3DSA:3.40.50.1980 33 122 4.9E-13 T 29-03-2018 AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 SUPERFAMILY SSF53807 34 291 1.02E-57 T 29-03-2018 AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 Gene3D G3DSA:3.40.50.1980 123 296 1.1E-26 T 29-03-2018 AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 Pfam PF01497 Periplasmic binding protein 38 269 6.0E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 9.2E-59 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 9.2E-59 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 9.2E-59 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 9.2E-59 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 9.2E-59 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM460_RS25545 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 9.2E-59 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 Gene3D G3DSA:1.10.580.10 27 281 4.1E-87 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 7.8E-132 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 SUPERFAMILY SSF48256 9 422 6.54E-168 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 3.5E-244 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 PIRSF PIRSF001369 38 427 1.5E-176 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type AM460_RS22755 acd7daf73268c9e327225dfc0793b584 427 Gene3D G3DSA:1.10.230.10 282 379 4.0E-37 T 29-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 PRINTS PR00990 Ribokinase signature 32 51 6.1E-28 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 PRINTS PR00990 Ribokinase signature 5 26 6.1E-28 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 PRINTS PR00990 Ribokinase signature 217 228 6.1E-28 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 PRINTS PR00990 Ribokinase signature 104 117 6.1E-28 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 PRINTS PR00990 Ribokinase signature 173 188 6.1E-28 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 Gene3D G3DSA:3.40.1190.20 1 306 1.8E-74 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.6E-63 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 Hamap MF_01987 Ribokinase [rbsK]. 1 301 25.217 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 4.2E-111 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM460_RS01255 e1758d4cb7d093f74960d7916969cbf6 306 SUPERFAMILY SSF53613 1 302 1.29E-80 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS04860 9981045fc4ed086eddada65a66ddbc5e 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 3.5E-145 T 29-03-2018 AM460_RS04860 9981045fc4ed086eddada65a66ddbc5e 463 Gene3D G3DSA:1.20.1250.20 22 228 4.4E-23 T 29-03-2018 AM460_RS04860 9981045fc4ed086eddada65a66ddbc5e 463 Pfam PF07690 Major Facilitator Superfamily 35 397 2.9E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS04860 9981045fc4ed086eddada65a66ddbc5e 463 PIRSF PIRSF002808 9 461 1.5E-100 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS04860 9981045fc4ed086eddada65a66ddbc5e 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM460_RS04860 9981045fc4ed086eddada65a66ddbc5e 463 Gene3D G3DSA:1.20.1250.20 246 462 1.3E-18 T 29-03-2018 AM460_RS04860 9981045fc4ed086eddada65a66ddbc5e 463 SUPERFAMILY SSF103473 18 451 2.75E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 Pfam PF07729 FCD domain 76 206 8.8E-20 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 SMART SM00895 76 208 7.1E-18 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 Gene3D G3DSA:1.20.120.530 68 209 1.7E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 66 2.6E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 SMART SM00345 8 66 2.0E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 Gene3D G3DSA:1.10.10.10 7 67 2.8E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 SUPERFAMILY SSF46785 9 70 2.15E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10965 f97ab39c1be492170f5d3fa5d61516b3 220 SUPERFAMILY SSF48008 72 209 6.28E-18 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS00310 c51b46a73e3b4c11476aa7aa6c6c677c 475 Pfam PF17482 Phage tail sheath C-terminal domain 368 464 4.5E-14 T 29-03-2018 IPR020287 Tail sheath protein, C-terminal domain AM460_RS00310 c51b46a73e3b4c11476aa7aa6c6c677c 475 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 182 358 1.5E-32 T 29-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM460_RS21170 c51b46a73e3b4c11476aa7aa6c6c677c 475 Pfam PF17482 Phage tail sheath C-terminal domain 368 464 4.5E-14 T 29-03-2018 IPR020287 Tail sheath protein, C-terminal domain AM460_RS21170 c51b46a73e3b4c11476aa7aa6c6c677c 475 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 182 358 1.5E-32 T 29-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM460_RS15790 3f2604a8408bddb6fb8c48f486fdb83f 218 Gene3D G3DSA:3.60.21.10 7 218 2.1E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS15790 3f2604a8408bddb6fb8c48f486fdb83f 218 SUPERFAMILY SSF56300 17 217 3.96E-43 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS15790 3f2604a8408bddb6fb8c48f486fdb83f 218 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 76 81 - T 29-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM460_RS15790 3f2604a8408bddb6fb8c48f486fdb83f 218 Pfam PF00149 Calcineurin-like phosphoesterase 18 155 5.2E-12 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS01260 f0bcfeda4a807d57b22004bfda21121a 438 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 21 424 5.8E-97 T 29-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AM460_RS01260 f0bcfeda4a807d57b22004bfda21121a 438 Pfam PF07690 Major Facilitator Superfamily 45 364 1.8E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS01260 f0bcfeda4a807d57b22004bfda21121a 438 Gene3D G3DSA:1.20.1250.20 15 238 5.3E-18 T 29-03-2018 AM460_RS01260 f0bcfeda4a807d57b22004bfda21121a 438 SUPERFAMILY SSF103473 205 424 1.28E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS01260 f0bcfeda4a807d57b22004bfda21121a 438 SUPERFAMILY SSF103473 13 175 1.28E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS01260 f0bcfeda4a807d57b22004bfda21121a 438 Gene3D G3DSA:1.20.1250.20 239 430 2.4E-22 T 29-03-2018 AM460_RS11505 a7898f8eb93d80908d265f8ba63943e7 293 SUPERFAMILY SSF53850 87 290 1.04E-38 T 29-03-2018 AM460_RS11505 a7898f8eb93d80908d265f8ba63943e7 293 Gene3D G3DSA:3.40.190.10 89 173 3.7E-18 T 29-03-2018 AM460_RS11505 a7898f8eb93d80908d265f8ba63943e7 293 Pfam PF03466 LysR substrate binding domain 87 288 2.6E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS11505 a7898f8eb93d80908d265f8ba63943e7 293 SUPERFAMILY SSF46785 1 84 4.73E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11505 a7898f8eb93d80908d265f8ba63943e7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.0E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS11505 a7898f8eb93d80908d265f8ba63943e7 293 Gene3D G3DSA:1.10.10.10 1 88 3.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11505 a7898f8eb93d80908d265f8ba63943e7 293 Gene3D G3DSA:3.40.190.10 174 256 3.1E-14 T 29-03-2018 AM460_RS20470 7d8155752be2cfd2ae80cce87499900a 276 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 272 6.9E-105 T 29-03-2018 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 AM460_RS20470 7d8155752be2cfd2ae80cce87499900a 276 Pfam PF03239 Iron permease FTR1 family 1 274 7.0E-76 T 29-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 AM460_RS20470 7d8155752be2cfd2ae80cce87499900a 276 SUPERFAMILY SSF103473 5 264 2.75E-6 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS23250 2580a29ab0383932419deb2a2bdb7ef8 67 Pfam PF02416 mttA/Hcf106 family 4 51 3.5E-12 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM460_RS23250 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 62 21.266 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM460_RS23250 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 27.925 T 29-03-2018 IPR024905 Sec-independent protein translocase protein TatE AM460_RS23250 2580a29ab0383932419deb2a2bdb7ef8 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 47 2.0E-20 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM460_RS13645 925db9b4ad38753374cef75e12d06554 239 PIRSF PIRSF005011 1 239 5.5E-157 T 29-03-2018 IPR023604 Uncharacterised protein family SanA AM460_RS13645 925db9b4ad38753374cef75e12d06554 239 Pfam PF02698 DUF218 domain 48 170 7.9E-18 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AM460_RS13645 925db9b4ad38753374cef75e12d06554 239 Gene3D G3DSA:3.40.50.620 38 174 3.5E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS24930 9515c84ce0e80ff58be67c618687cc3d 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.791 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS24930 9515c84ce0e80ff58be67c618687cc3d 46 SUPERFAMILY SSF57840 1 41 6.15E-14 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS24930 9515c84ce0e80ff58be67c618687cc3d 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS24930 9515c84ce0e80ff58be67c618687cc3d 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.7E-8 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS24930 9515c84ce0e80ff58be67c618687cc3d 46 Pfam PF00444 Ribosomal protein L36 1 41 2.2E-17 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS25195 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 SUPERFAMILY SSF53697 1 189 2.6E-52 T 29-03-2018 AM460_RS25195 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Pfam PF13580 SIS domain 12 146 1.3E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS25195 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Gene3D G3DSA:3.40.50.10490 1 192 1.2E-42 T 29-03-2018 AM460_RS25195 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.958 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM460_RS25195 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.4E-84 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM460_RS26820 22329ad7d715eec2f34de1ed9ec71682 161 SUPERFAMILY SSF50249 1 161 3.77E-48 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS26820 22329ad7d715eec2f34de1ed9ec71682 161 Gene3D G3DSA:2.40.50.140 1 105 2.1E-35 T 29-03-2018 AM460_RS26820 22329ad7d715eec2f34de1ed9ec71682 161 Pfam PF00436 Single-strand binding protein family 1 96 5.2E-32 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM460_RS26820 22329ad7d715eec2f34de1ed9ec71682 161 PIRSF PIRSF002070 121 157 380.0 T 29-03-2018 AM460_RS26820 22329ad7d715eec2f34de1ed9ec71682 161 PIRSF PIRSF002070 1 147 2.8E-30 T 29-03-2018 AM460_RS26820 22329ad7d715eec2f34de1ed9ec71682 161 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 161 4.2E-47 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS26820 22329ad7d715eec2f34de1ed9ec71682 161 Hamap MF_00984 Single-stranded DNA-binding protein. 1 102 32.174 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS12505 df8ac755260c48358737e3e95fc98c1d 442 SUPERFAMILY SSF53686 73 435 7.0E-55 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS12505 df8ac755260c48358737e3e95fc98c1d 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 280.909 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM460_RS12505 df8ac755260c48358737e3e95fc98c1d 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 438 9.3E-246 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM460_RS12505 df8ac755260c48358737e3e95fc98c1d 442 Gene3D G3DSA:3.40.50.1100 248 441 6.6E-29 T 29-03-2018 AM460_RS12505 df8ac755260c48358737e3e95fc98c1d 442 Gene3D G3DSA:3.40.50.1100 73 247 5.3E-26 T 29-03-2018 AM460_RS12505 df8ac755260c48358737e3e95fc98c1d 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM460_RS12505 df8ac755260c48358737e3e95fc98c1d 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 73 404 3.8E-70 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS09975 008e624cc3b1551dbd72679207093734 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.8E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS09975 008e624cc3b1551dbd72679207093734 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS09975 008e624cc3b1551dbd72679207093734 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 5.4E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS09975 008e624cc3b1551dbd72679207093734 187 PIRSF PIRSF004525 1 187 1.8E-65 T 29-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 SUPERFAMILY SSF52440 3 96 1.63E-29 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 SUPERFAMILY SSF56059 97 302 2.36E-57 T 29-03-2018 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.545 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 3.5E-18 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 PIRSF PIRSF039102 38 306 8.5E-100 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 PIRSF PIRSF039102 1 43 1.8E-7 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 3.9E-113 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 1.1E-72 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 Gene3D G3DSA:3.40.50.20 1 96 5.2E-31 T 29-03-2018 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 Gene3D G3DSA:3.30.470.20 172 306 6.2E-38 T 29-03-2018 AM460_RS25920 d70f06a02e060cb6023b7e6a19438fd1 306 Gene3D G3DSA:3.30.1490.20 97 171 1.4E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS06425 9184ee353c4290d86b67caae6006c3e3 133 PIRSF PIRSF016821 6 133 7.2E-41 T 29-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AM460_RS06425 9184ee353c4290d86b67caae6006c3e3 133 SMART SM00363 9 72 1.2E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS06425 9184ee353c4290d86b67caae6006c3e3 133 Pfam PF01479 S4 domain 9 53 2.9E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS06425 9184ee353c4290d86b67caae6006c3e3 133 SUPERFAMILY SSF55174 7 103 2.22E-31 T 29-03-2018 AM460_RS06425 9184ee353c4290d86b67caae6006c3e3 133 Gene3D G3DSA:3.10.290.10 2 105 4.8E-27 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS17045 0e26392119e010470426bdc5803cbba2 111 Pfam PF06942 GlpM protein 5 111 4.1E-50 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC AM460_RS17045 0e26392119e010470426bdc5803cbba2 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 3.0E-45 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 6.3E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 259 314 1.3E-20 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 119 174 5.0E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 PIRSF PIRSF014774 1 314 2.5E-185 T 29-03-2018 IPR025539 YdgH protein AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 247 314 1.8E-22 T 29-03-2018 IPR025543 Dodecin-like AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 106 174 5.3E-17 T 29-03-2018 IPR025543 Dodecin-like AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 22 90 1.1E-19 T 29-03-2018 IPR025543 Dodecin-like AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 107 177 8.5E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 3 93 7.46E-22 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS17065 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 239 314 1.96E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS05060 c204b3c6e71490e6741566ae7c9a67f8 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 9 222 5.5E-97 T 29-03-2018 IPR001405 RadC protein AM460_RS05060 c204b3c6e71490e6741566ae7c9a67f8 222 SUPERFAMILY SSF47781 17 85 4.31E-8 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS05060 c204b3c6e71490e6741566ae7c9a67f8 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 53.483 T 29-03-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily AM460_RS05060 c204b3c6e71490e6741566ae7c9a67f8 222 Pfam PF04002 RadC-like JAB domain 103 220 1.8E-43 T 29-03-2018 IPR025657 RadC-like JAB domain AM460_RS05060 c204b3c6e71490e6741566ae7c9a67f8 222 Gene3D G3DSA:3.40.140.10 97 222 1.6E-46 T 29-03-2018 AM460_RS05060 c204b3c6e71490e6741566ae7c9a67f8 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM460_RS20150 0ec3de5ec28734283c0227b26c7544d3 317 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.1E-37 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM460_RS20150 0ec3de5ec28734283c0227b26c7544d3 317 SUPERFAMILY SSF64518 1 315 1.14E-62 T 29-03-2018 AM460_RS20150 0ec3de5ec28734283c0227b26c7544d3 317 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 192 3.0E-72 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AM460_RS20150 0ec3de5ec28734283c0227b26c7544d3 317 Gene3D G3DSA:1.20.1330.10 38 291 3.9E-27 T 29-03-2018 AM460_RS14780 ac94b84037af8c4b0a80616ada94a900 211 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 3 204 22.447 T 29-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AM460_RS14780 ac94b84037af8c4b0a80616ada94a900 211 Pfam PF01794 Ferric reductase like transmembrane component 48 160 7.1E-15 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 SUPERFAMILY SSF81342 9 226 5.96E-40 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 Gene3D G3DSA:1.20.950.20 6 234 3.9E-43 T 29-03-2018 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 181 198 - T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 19 36 - T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 12 225 1.5E-78 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 Pfam PF01292 Prokaryotic cytochrome b561 14 220 8.8E-36 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 132 151 4.9E-47 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 16 39 4.9E-47 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 54 78 4.9E-47 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 212 225 4.9E-47 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS20665 679dee09fe99c4dbbb29e46a46f165b2 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 181 203 4.9E-47 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 SMART SM00228 374 447 1.6E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 SMART SM00228 267 349 3.6E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 SUPERFAMILY SSF50156 386 451 1.71E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 SUPERFAMILY SSF50156 225 350 1.18E-23 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 SUPERFAMILY SSF50494 39 262 6.35E-63 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 Gene3D G3DSA:2.30.42.10 367 455 2.8E-14 T 29-03-2018 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 443 2.1E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 3.5E-30 T 29-03-2018 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 Gene3D G3DSA:2.40.10.10 28 139 5.4E-33 T 29-03-2018 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 Pfam PF13180 PDZ domain 285 358 1.7E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 Gene3D G3DSA:2.30.42.10 262 366 1.7E-26 T 29-03-2018 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 5.5E-160 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 8.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 8.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 8.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 8.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 8.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 8.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07305 7d1cda5fcc8683f2fc0f1d400a30c5c8 455 Gene3D G3DSA:2.40.10.10 140 257 4.7E-40 T 29-03-2018 AM460_RS08660 4f4c5897ac73063b5d954c41007dcbcf 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 1.1E-60 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM460_RS08660 4f4c5897ac73063b5d954c41007dcbcf 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 6.4E-92 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 SMART SM00862 145 216 9.1E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 SUPERFAMILY SSF52172 1 132 8.25E-36 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 Gene3D G3DSA:1.10.10.10 120 222 2.4E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 SUPERFAMILY SSF46894 118 218 7.37E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 SMART SM00448 1 112 7.0E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.6E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS02265 a4e3edbbe1f01dae9cfde6241fd58be5 222 Gene3D G3DSA:3.40.50.2300 1 119 7.4E-33 T 29-03-2018 AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 Pfam PF06418 CTP synthase N-terminus 5 266 5.9E-126 T 29-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52540 3 269 4.18E-122 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.0E-64 T 29-03-2018 IPR017926 Glutamine amidotransferase AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.300 1 284 5.2E-129 T 29-03-2018 AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.880 286 543 2.0E-74 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.6E-266 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52317 289 542 2.06E-88 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS10360 65fa8534717f4498012197a9bedf951b 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.971 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 Pfam PF00158 Sigma-54 interaction domain 331 490 2.6E-35 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 Gene3D G3DSA:1.10.10.60 567 635 2.5E-17 T 29-03-2018 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 SUPERFAMILY SSF52540 331 567 1.86E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 Pfam PF02954 Bacterial regulatory protein, Fis family 589 628 3.5E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 SUPERFAMILY SSF55785 198 297 7.85E-8 T 29-03-2018 IPR000014 PAS domain AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 Gene3D G3DSA:3.30.450.20 197 307 5.2E-11 T 29-03-2018 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 Gene3D G3DSA:3.40.50.300 325 496 2.2E-19 T 29-03-2018 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 SMART SM00091 203 267 1.0E-5 T 29-03-2018 IPR000014 PAS domain AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 410 425 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 Pfam PF00989 PAS fold 204 306 1.9E-13 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 SUPERFAMILY SSF46689 536 631 8.96E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 SMART SM00382 347 488 0.0016 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS19245 ee8ebce84414109668d55fb54dda646d 639 Gene3D G3DSA:1.10.8.60 497 566 3.9E-12 T 29-03-2018 AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 Pfam PF08351 Domain of unknown function (DUF1726) 66 150 3.3E-7 T 29-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 SUPERFAMILY SSF52540 172 285 6.84E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 Gene3D G3DSA:3.40.630.30 375 564 3.4E-15 T 29-03-2018 AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 18 652 47.095 T 29-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 Pfam PF05127 Helicase 197 337 5.3E-41 T 29-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 Pfam PF17176 tRNA-binding domain 537 653 1.3E-36 T 29-03-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 Gene3D G3DSA:3.40.50.300 171 321 1.4E-5 T 29-03-2018 AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 SUPERFAMILY SSF55729 370 418 7.21E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 SUPERFAMILY SSF55729 454 513 7.21E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS12000 bdb8f9e7ce6be00b613816d775d499d6 671 Pfam PF13718 GNAT acetyltransferase 2 369 483 5.0E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 Pfam PF13237 4Fe-4S dicluster domain 221 270 6.0E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 Gene3D G3DSA:3.30.70.20 233 286 7.0E-10 T 29-03-2018 AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 Pfam PF12801 4Fe-4S binding domain 83 126 1.9E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 Pfam PF12801 4Fe-4S binding domain 179 211 3.3E-4 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 Gene3D G3DSA:3.30.70.20 195 232 3.1E-7 T 29-03-2018 AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 SUPERFAMILY SSF54862 103 143 6.98E-21 T 29-03-2018 AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 SUPERFAMILY SSF54862 191 280 6.98E-21 T 29-03-2018 AM460_RS13315 123ca7d53905ec70d7575cec5712301e 287 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 278 5.7E-117 T 29-03-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 AM460_RS01760 fafbd2fd3b195cd952ba25042ba54d8d 216 SMART SM00934 5 207 6.1E-36 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01760 fafbd2fd3b195cd952ba25042ba54d8d 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 7.9E-28 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01760 fafbd2fd3b195cd952ba25042ba54d8d 216 Gene3D G3DSA:3.20.20.70 1 216 3.1E-26 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS01760 fafbd2fd3b195cd952ba25042ba54d8d 216 SUPERFAMILY SSF51366 2 215 1.89E-40 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS01760 fafbd2fd3b195cd952ba25042ba54d8d 216 Hamap MF_01267 3-keto-L-gulonate-6-phosphate decarboxylase UlaD [ulaD]. 1 216 69.95 T 29-03-2018 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD GO:0000287|GO:0019854|GO:0033982 KEGG: 00040+4.1.1.85|KEGG: 00053+4.1.1.85|MetaCyc: PWY-6961 AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 1.0E-111 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 SMART SM00382 223 429 5.3E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 Gene3D G3DSA:3.40.50.300 187 471 5.9E-65 T 29-03-2018 AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 SUPERFAMILY SSF52540 204 275 1.97E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 SUPERFAMILY SSF52540 302 456 1.97E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 4.1E-175 T 29-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 SUPERFAMILY SSF48024 25 136 1.23E-39 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 Gene3D G3DSA:1.10.860.10 18 169 6.2E-49 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM460_RS02710 e308b06afbdefb83ffe100b5332f471d 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 3.1E-37 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 SUPERFAMILY SSF140990 402 602 3.79E-73 T 29-03-2018 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 SUPERFAMILY SSF52540 141 391 7.38E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF01434 Peptidase family M41 382 591 8.4E-83 T 29-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 Gene3D G3DSA:3.40.50.300 128 331 4.2E-63 T 29-03-2018 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF06480 FtsH Extracellular 5 93 1.6E-16 T 29-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 612 37.49 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 Gene3D G3DSA:1.10.8.60 332 411 3.2E-25 T 29-03-2018 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 29-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.7E-248 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM460_RS07560 be9a89b705d157b2d7358a7f019fb0f8 644 SMART SM00382 184 323 1.9E-26 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 Gene3D G3DSA:3.90.170.10 267 432 8.0E-66 T 29-03-2018 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 8.2E-210 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.7E-178 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 SUPERFAMILY SSF52540 3 431 2.34E-180 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.278 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 29-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 SMART SM00788 4 425 2.7E-301 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 29-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 Gene3D G3DSA:3.40.440.10 151 266 3.7E-28 T 29-03-2018 AM460_RS01865 3f6c911a2be76887e435982928ef7f56 432 Gene3D G3DSA:3.40.440.10 1 150 1.3E-54 T 29-03-2018 AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 SUPERFAMILY SSF49584 151 236 1.96E-20 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 Gene3D G3DSA:2.60.40.10 38 154 9.5E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 37 156 1.2E-38 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 180 233 1.7E-10 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 SUPERFAMILY SSF49354 37 156 1.75E-40 T 29-03-2018 IPR008962 PapD-like AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 173 188 2.2E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 138 153 2.2E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 38 47 2.2E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 83 104 2.2E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 112 129 2.2E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site AM460_RS00850 46524d73edb61babbeda9f9e6f6734dc 241 Gene3D G3DSA:2.60.40.10 158 241 1.6E-23 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS04940 c27e253f60a319a8a6ec825810fc6273 156 SUPERFAMILY SSF55804 1 149 2.35E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS04940 c27e253f60a319a8a6ec825810fc6273 156 Gene3D G3DSA:3.40.930.10 1 151 6.1E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS04940 c27e253f60a319a8a6ec825810fc6273 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 2.4E-34 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS04940 c27e253f60a319a8a6ec825810fc6273 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 1.2E-37 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AM460_RS01635 8d43c2a238da17569c00ce43a9f16edb 286 Pfam PF05368 NmrA-like family 2 220 3.5E-24 T 29-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AM460_RS01635 8d43c2a238da17569c00ce43a9f16edb 286 SUPERFAMILY SSF51735 2 250 1.61E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS01635 8d43c2a238da17569c00ce43a9f16edb 286 Gene3D G3DSA:3.40.50.720 1 66 3.9E-12 T 29-03-2018 AM460_RS01635 8d43c2a238da17569c00ce43a9f16edb 286 Gene3D G3DSA:3.40.50.720 67 232 1.2E-11 T 29-03-2018 AM460_RS03810 eac6eeeb1817e3c2e5711c8c353f5833 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.244 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM460_RS03810 eac6eeeb1817e3c2e5711c8c353f5833 194 Gene3D G3DSA:3.90.550.10 2 193 6.1E-37 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS03810 eac6eeeb1817e3c2e5711c8c353f5833 194 SUPERFAMILY SSF53448 7 187 3.83E-36 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS03810 eac6eeeb1817e3c2e5711c8c353f5833 194 Pfam PF12804 MobA-like NTP transferase domain 9 160 3.7E-35 T 29-03-2018 IPR025877 MobA-like NTP transferase AM460_RS03810 eac6eeeb1817e3c2e5711c8c353f5833 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 188 1.8E-69 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM460_RS04570 89f4e395d961f21495741ae5f17800b1 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 1.6E-121 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AM460_RS04570 89f4e395d961f21495741ae5f17800b1 257 Pfam PF00005 ABC transporter 26 181 1.4E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS04570 89f4e395d961f21495741ae5f17800b1 257 SUPERFAMILY SSF52540 11 243 2.66E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04570 89f4e395d961f21495741ae5f17800b1 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS04570 89f4e395d961f21495741ae5f17800b1 257 Gene3D G3DSA:3.40.50.300 8 255 2.0E-64 T 29-03-2018 AM460_RS04570 89f4e395d961f21495741ae5f17800b1 257 SMART SM00382 35 237 1.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21485 602ca04b7579d8d4de3042ca117d37b7 74 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.3E-22 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM460_RS21485 602ca04b7579d8d4de3042ca117d37b7 74 SUPERFAMILY SSF57716 34 71 4.99E-9 T 29-03-2018 AM460_RS21485 602ca04b7579d8d4de3042ca117d37b7 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM460_RS21485 602ca04b7579d8d4de3042ca117d37b7 74 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 4.1E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS21485 602ca04b7579d8d4de3042ca117d37b7 74 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 4.1E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS21485 602ca04b7579d8d4de3042ca117d37b7 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 34 64 2.3E-11 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.50.50.60 341 440 5.0E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.40.30.10 1 94 1.3E-28 T 29-03-2018 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.40.30.10 103 195 1.0E-7 T 29-03-2018 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Pfam PF13192 Thioredoxin domain 126 195 2.9E-8 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PIRSF PIRSF000238 1 521 1.7E-263 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 SUPERFAMILY SSF51905 207 514 4.4E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 3.0E-38 T 29-03-2018 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 3.0E-38 T 29-03-2018 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 3.0E-38 T 29-03-2018 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 3.0E-38 T 29-03-2018 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 3.0E-38 T 29-03-2018 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 4.2E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 SUPERFAMILY SSF52833 1 101 2.57E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.50.50.60 228 340 6.0E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 2.0E-240 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 SUPERFAMILY SSF52833 106 197 4.33E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.3E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.50.50.60 196 227 5.2E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS23350 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.50.50.60 441 521 4.0E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS11940 03976b836c485a5ee89901e09d2fb723 208 Gene3D G3DSA:3.40.50.2020 1 206 4.5E-59 T 29-03-2018 AM460_RS11940 03976b836c485a5ee89901e09d2fb723 208 SUPERFAMILY SSF53271 4 206 3.02E-66 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS11940 03976b836c485a5ee89901e09d2fb723 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 4.1E-90 T 29-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM460_RS11940 03976b836c485a5ee89901e09d2fb723 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.829 T 29-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM460_RS11940 03976b836c485a5ee89901e09d2fb723 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 8.9E-65 T 29-03-2018 AM460_RS17635 cdfc413c0c17f7e009218c5af0acba7d 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 3.3E-21 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 54.234 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 Gene3D G3DSA:3.40.50.300 1 214 1.2E-68 T 29-03-2018 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-16 T 29-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.5E-76 T 29-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 29-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 SUPERFAMILY SSF52540 1 213 4.91E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23980 19579ce40a7e689d7eafceb415f215e8 214 Pfam PF00406 Adenylate kinase 5 186 6.9E-61 T 29-03-2018 AM460_RS20425 4a4199a033361c9f825efa2c4e39e1a7 455 SUPERFAMILY SSF55073 287 442 1.33E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS20425 4a4199a033361c9f825efa2c4e39e1a7 455 Pfam PF00990 Diguanylate cyclase, GGDEF domain 282 439 4.4E-50 T 29-03-2018 IPR000160 GGDEF domain AM460_RS20425 4a4199a033361c9f825efa2c4e39e1a7 455 Pfam PF17158 Membrane-associated sensor, integral membrane domain 41 274 7.8E-70 T 29-03-2018 IPR033424 Membrane-associated sensor domain AM460_RS20425 4a4199a033361c9f825efa2c4e39e1a7 455 SMART SM00267 271 443 4.6E-68 T 29-03-2018 IPR000160 GGDEF domain AM460_RS20425 4a4199a033361c9f825efa2c4e39e1a7 455 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 443 5.4E-46 T 29-03-2018 IPR000160 GGDEF domain AM460_RS20425 4a4199a033361c9f825efa2c4e39e1a7 455 Gene3D G3DSA:3.30.70.270 281 454 2.3E-50 T 29-03-2018 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:3.40.710.10 26 310 2.3E-45 T 29-03-2018 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 SMART SM00936 292 383 1.8E-33 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.4E-101 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF69189 292 385 7.85E-25 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:2.60.410.10 311 382 1.1E-17 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF56601 10 292 6.71E-76 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 1.8E-24 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.7E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.7E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS23215 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.7E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS10025 cf2a5357f3b33969dc81775c12293e68 526 Pfam PF00367 phosphotransferase system, EIIB 452 484 4.0E-14 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS10025 cf2a5357f3b33969dc81775c12293e68 526 SUPERFAMILY SSF55604 449 524 9.68E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS10025 cf2a5357f3b33969dc81775c12293e68 526 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 412 509 4.8E-16 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS10025 cf2a5357f3b33969dc81775c12293e68 526 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 462 479 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS10025 cf2a5357f3b33969dc81775c12293e68 526 Gene3D G3DSA:3.30.1360.60 448 523 1.5E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS10025 cf2a5357f3b33969dc81775c12293e68 526 Pfam PF02378 Phosphotransferase system, EIIC 14 353 1.2E-74 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS19520 576492529cd8073567c2a494326af30a 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS19520 576492529cd8073567c2a494326af30a 243 Gene3D G3DSA:1.10.1660.10 1 120 2.3E-26 T 29-03-2018 AM460_RS19520 576492529cd8073567c2a494326af30a 243 Pfam PF13411 MerR HTH family regulatory protein 4 71 5.3E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS19520 576492529cd8073567c2a494326af30a 243 SMART SM00422 4 73 3.6E-29 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS19520 576492529cd8073567c2a494326af30a 243 SUPERFAMILY SSF46955 3 89 6.41E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 Gene3D G3DSA:1.10.260.40 2 54 2.3E-21 T 29-03-2018 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 Gene3D G3DSA:3.40.50.2300 177 307 3.2E-47 T 29-03-2018 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 Gene3D G3DSA:3.40.50.2300 55 176 8.9E-31 T 29-03-2018 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.5E-40 T 29-03-2018 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 SUPERFAMILY SSF47413 2 59 3.26E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 SUPERFAMILY SSF53822 61 329 2.9E-89 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.3E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS04425 51be117e54ea350e7ab4780374f17d15 330 SMART SM00354 1 71 1.9E-35 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS13105 7eaddb28df978325e72d61236cb1f1b2 73 Gene3D G3DSA:1.10.10.60 2 68 4.7E-5 T 29-03-2018 AM460_RS02500 da1ffcb2ae2afa2007120d952f829416 127 Pfam PF03918 Cytochrome C biogenesis protein 8 126 1.3E-43 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AM460_RS02500 da1ffcb2ae2afa2007120d952f829416 127 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 3 127 2.9E-63 T 29-03-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 SUPERFAMILY SSF47729 1 90 4.27E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 SMART SM00411 1 90 7.6E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.0E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.0E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.0E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.3E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS24165 f6fe331eede1004b86965d42acd8bb28 90 Gene3D G3DSA:4.10.520.10 1 90 8.1E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.4E-24 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 1.7E-12 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 Gene3D G3DSA:3.30.230.70 1 238 6.0E-62 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 SUPERFAMILY SSF54211 1 181 4.2E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 SUPERFAMILY SSF55666 153 236 2.88E-26 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 29-03-2018 IPR018336 Ribonuclease PH, conserved site AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.1E-115 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM460_RS05035 34270b1049a87a8cb4c8721fd233db61 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 50.036 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM460_RS20195 18a635cda0910181c6ca37d44a0e261a 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 1.6E-12 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM460_RS20195 18a635cda0910181c6ca37d44a0e261a 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.2E-10 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM460_RS20195 18a635cda0910181c6ca37d44a0e261a 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 3.3E-52 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AM460_RS20195 18a635cda0910181c6ca37d44a0e261a 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM460_RS11080 c8602f9aec033da08c066274eb455bc4 272 SUPERFAMILY SSF46785 14 74 1.67E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11080 c8602f9aec033da08c066274eb455bc4 272 Pfam PF13730 Helix-turn-helix domain 19 66 1.0E-9 T 29-03-2018 AM460_RS11080 c8602f9aec033da08c066274eb455bc4 272 Gene3D G3DSA:1.10.10.10 2 85 6.5E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22575 d539b04e98bb74e4328018bcf12a1c58 313 Gene3D G3DSA:1.20.1510.10 17 213 9.5E-64 T 29-03-2018 AM460_RS22575 d539b04e98bb74e4328018bcf12a1c58 313 Gene3D G3DSA:3.30.70.1350 216 293 2.8E-12 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM460_RS22575 d539b04e98bb74e4328018bcf12a1c58 313 Pfam PF01545 Cation efflux family 22 213 6.5E-52 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM460_RS22575 d539b04e98bb74e4328018bcf12a1c58 313 SUPERFAMILY SSF161111 16 214 1.07E-60 T 29-03-2018 AM460_RS22575 d539b04e98bb74e4328018bcf12a1c58 313 SUPERFAMILY SSF160240 227 292 8.5E-10 T 29-03-2018 AM460_RS22575 d539b04e98bb74e4328018bcf12a1c58 313 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 312 66.799 T 29-03-2018 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 AM460_RS22575 d539b04e98bb74e4328018bcf12a1c58 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 293 4.0E-102 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM460_RS08550 e71f66b6403e6c6d421ff3554bbe3635 346 Gene3D G3DSA:3.20.20.100 15 334 1.6E-86 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS08550 e71f66b6403e6c6d421ff3554bbe3635 346 SUPERFAMILY SSF51430 13 331 1.44E-89 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS08550 e71f66b6403e6c6d421ff3554bbe3635 346 Pfam PF00248 Aldo/keto reductase family 28 332 1.5E-80 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS05615 3b467d8557a954bfef5e63afc7f33279 559 Pfam PF11658 Cellulose biosynthesis protein BcsG 24 554 5.0E-236 T 29-03-2018 IPR017744 Cellulose biosynthesis protein BcsG AM460_RS05615 3b467d8557a954bfef5e63afc7f33279 559 Gene3D G3DSA:3.40.720.10 157 509 4.3E-8 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS05615 3b467d8557a954bfef5e63afc7f33279 559 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 23 557 1.1E-246 T 29-03-2018 IPR017744 Cellulose biosynthesis protein BcsG AM460_RS05620 2e6477a5828faa4bb31e32492e007a94 63 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 60 4.0E-30 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM460_RS05620 2e6477a5828faa4bb31e32492e007a94 63 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 63 1.0E-34 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM460_RS05620 2e6477a5828faa4bb31e32492e007a94 63 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 63 6.0E-29 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM460_RS07980 b829745cab534ca00900fb0c6e45df03 432 SUPERFAMILY SSF103473 3 412 2.75E-81 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS07980 b829745cab534ca00900fb0c6e45df03 432 Pfam PF07690 Major Facilitator Superfamily 16 287 1.2E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS07980 b829745cab534ca00900fb0c6e45df03 432 Gene3D G3DSA:1.20.1250.20 214 427 1.5E-24 T 29-03-2018 AM460_RS07980 b829745cab534ca00900fb0c6e45df03 432 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 17 411 1.8E-128 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS07980 b829745cab534ca00900fb0c6e45df03 432 Gene3D G3DSA:1.20.1250.20 1 202 1.6E-39 T 29-03-2018 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 SUPERFAMILY SSF53706 57 697 2.62E-182 T 29-03-2018 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Gene3D G3DSA:3.90.55.10 539 609 3.3E-22 T 29-03-2018 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 29-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 5.1E-29 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 45 3.7E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 1.5E-113 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 SUPERFAMILY SSF50692 641 814 5.88E-42 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 116 9.5E-18 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Gene3D G3DSA:3.40.228.10 610 676 6.4E-14 T 29-03-2018 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Gene3D G3DSA:2.40.40.20 677 814 1.2E-37 T 29-03-2018 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Gene3D G3DSA:3.40.228.10 205 489 4.4E-65 T 29-03-2018 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 Gene3D G3DSA:2.20.25.90 49 121 8.1E-19 T 29-03-2018 AM460_RS21550 6df437a53ca966df73b2e94523d6029e 814 SMART SM00926 56 116 1.8E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 Gene3D G3DSA:1.10.10.10 1 60 5.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 SMART SM01134 72 233 7.1E-72 T 29-03-2018 AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 SUPERFAMILY SSF46785 4 61 1.32E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 Gene3D G3DSA:3.40.50.1360 72 239 1.4E-38 T 29-03-2018 AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 SMART SM00420 6 58 3.9E-23 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 7.7E-52 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 SUPERFAMILY SSF100950 73 234 1.12E-36 T 29-03-2018 AM460_RS10735 4253926988a16ba07678e8f4c3555b1c 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.1E-21 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 Gene3D G3DSA:3.40.1190.20 46 308 6.3E-46 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 Pfam PF00294 pfkB family carbohydrate kinase 12 296 2.2E-65 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 3.0E-97 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 PIRSF PIRSF000535 1 309 4.0E-112 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 SUPERFAMILY SSF53613 4 297 7.79E-64 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS16395 f1f815a7a4ac8e05683ed8680fa540ca 309 Gene3D G3DSA:2.20.150.10 11 45 1.2E-6 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 PIRSF PIRSF006809 3 419 6.3E-152 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.496 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.1E-29 T 29-03-2018 IPR032305 GTP-binding protein, middle domain AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 4.7E-155 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 SUPERFAMILY SSF54980 365 422 4.03E-14 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.3E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 Gene3D G3DSA:3.40.50.300 157 403 4.4E-29 T 29-03-2018 AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.2E-30 T 29-03-2018 IPR025121 GTPase HflX, N-terminal AM460_RS01885 3b30588aa906d461fa5cd73634258778 426 SUPERFAMILY SSF52540 197 373 6.19E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 Gene3D G3DSA:3.30.300.20 186 300 1.2E-42 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 SUPERFAMILY SSF52540 11 205 1.57E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.354 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.5E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 Gene3D G3DSA:3.40.50.300 26 180 1.6E-27 T 29-03-2018 AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 1.3E-41 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 SUPERFAMILY SSF54814 182 297 1.96E-40 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 Gene3D G3DSA:3.40.50.300 8 25 0.017 T 29-03-2018 AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 Pfam PF07650 KH domain 209 285 1.8E-19 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS11565 2fccd1e1f3386a89238f3efe7376897d 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 1.5E-120 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS17280 6a88319a98c040425d84c21fcf80fd3b 127 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS17280 6a88319a98c040425d84c21fcf80fd3b 127 SMART SM00342 25 108 3.0E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS17280 6a88319a98c040425d84c21fcf80fd3b 127 Gene3D G3DSA:1.10.10.60 1 62 1.7E-18 T 29-03-2018 AM460_RS17280 6a88319a98c040425d84c21fcf80fd3b 127 SUPERFAMILY SSF46689 62 111 4.08E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS17280 6a88319a98c040425d84c21fcf80fd3b 127 SUPERFAMILY SSF46689 10 59 1.03E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS17280 6a88319a98c040425d84c21fcf80fd3b 127 Gene3D G3DSA:1.10.10.60 63 127 8.7E-15 T 29-03-2018 AM460_RS17280 6a88319a98c040425d84c21fcf80fd3b 127 Pfam PF12833 Helix-turn-helix domain 32 108 5.1E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS12005 a11d0cb617c476d10c535e84080d4c78 232 SUPERFAMILY SSF53474 5 205 3.51E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS12005 a11d0cb617c476d10c535e84080d4c78 232 Pfam PF02230 Phospholipase/Carboxylesterase 4 209 9.7E-57 T 29-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AM460_RS12005 a11d0cb617c476d10c535e84080d4c78 232 Gene3D G3DSA:3.40.50.1820 5 215 2.1E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24405 7eb132f9aa70ce6cae9da862192b0bb6 93 Pfam PF10971 Protein of unknown function (DUF2773) 13 93 9.2E-44 T 29-03-2018 IPR024497 Protein of unknown function DUF2773 AM460_RS24405 7eb132f9aa70ce6cae9da862192b0bb6 93 ProDom PD029376 YDBD YKIA ECS0442 ECS2009 1 93 8.0E-42 T 29-03-2018 IPR024497 Protein of unknown function DUF2773 AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 SUPERFAMILY SSF50685 79 160 2.41E-6 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 SUPERFAMILY SSF110997 287 357 9.02E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 Pfam PF03330 Lytic transglycolase 79 166 6.3E-20 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 Gene3D G3DSA:3.30.70.1070 289 362 2.9E-15 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 169 20.707 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 Pfam PF05036 Sporulation related domain 287 359 1.6E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 Gene3D G3DSA:2.40.40.10 57 169 6.8E-16 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM460_RS23210 b3c0c3a893e80b58c416ea22d7cccb4e 362 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 180 7.0E-29 T 29-03-2018 IPR012997 Rare lipoprotein A AM460_RS21800 9647f12a538c738defc332f0e33b11a2 394 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 127 277 3.0E-22 T 29-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM460_RS21800 9647f12a538c738defc332f0e33b11a2 394 Pfam PF17482 Phage tail sheath C-terminal domain 281 375 2.7E-7 T 29-03-2018 IPR020287 Tail sheath protein, C-terminal domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Pfam PF02369 Bacterial Ig-like domain (group 1) 169 257 8.2E-22 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Pfam PF02369 Bacterial Ig-like domain (group 1) 1 63 4.4E-17 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Pfam PF02369 Bacterial Ig-like domain (group 1) 361 431 1.6E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Pfam PF02369 Bacterial Ig-like domain (group 1) 269 356 2.0E-20 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Pfam PF02369 Bacterial Ig-like domain (group 1) 66 159 1.6E-21 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SUPERFAMILY SSF49373 1 67 4.45E-9 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SUPERFAMILY SSF49373 187 257 3.34E-14 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Gene3D G3DSA:2.60.40.10 163 265 3.2E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Gene3D G3DSA:2.60.40.10 266 368 9.6E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Gene3D G3DSA:2.60.40.10 1 74 1.7E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SMART SM00634 71 159 3.6E-21 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SMART SM00634 366 433 7.3E-7 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SMART SM00634 1 62 0.002 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SMART SM00634 171 260 8.8E-18 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SMART SM00634 265 354 9.8E-21 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SUPERFAMILY SSF49373 277 356 1.46E-13 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SUPERFAMILY SSF49373 359 432 2.07E-14 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Gene3D G3DSA:2.60.40.10 75 162 6.3E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 Gene3D G3DSA:2.60.40.10 369 433 3.7E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS14675 fd50b1c3a6b2540654367513ea70e4c1 433 SUPERFAMILY SSF49373 64 157 5.89E-18 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS27360 6e410b05ef91764e52dd9bcfa18c6c62 24 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 24 3.2E-17 T 29-03-2018 IPR012605 RepA1 leader peptide Tap AM460_RS27360 6e410b05ef91764e52dd9bcfa18c6c62 24 Pfam PF08048 Tap RepA1 leader peptide 1 24 1.2E-14 T 29-03-2018 IPR012605 RepA1 leader peptide Tap AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 Gene3D G3DSA:3.40.190.10 22 199 5.1E-33 T 29-03-2018 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 5.0E-76 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 Gene3D G3DSA:3.40.190.10 200 335 1.7E-19 T 29-03-2018 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 1.7E-34 T 29-03-2018 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 SUPERFAMILY SSF53850 29 369 2.36E-105 T 29-03-2018 AM460_RS22030 338a22959fb33264b7d78131b1564d6a 370 PIRSF PIRSF019574 1 370 2.3E-144 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS02695 5d386668b44a73f55bfcc6a047d7eaf9 334 SUPERFAMILY SSF52540 172 328 2.82E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02695 5d386668b44a73f55bfcc6a047d7eaf9 334 Gene3D G3DSA:3.40.50.620 1 171 4.7E-10 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS02695 5d386668b44a73f55bfcc6a047d7eaf9 334 SUPERFAMILY SSF52374 6 157 3.26E-11 T 29-03-2018 AM460_RS02695 5d386668b44a73f55bfcc6a047d7eaf9 334 Pfam PF13521 AAA domain 173 324 1.7E-30 T 29-03-2018 AM460_RS02695 5d386668b44a73f55bfcc6a047d7eaf9 334 Gene3D G3DSA:3.40.50.300 172 329 1.6E-15 T 29-03-2018 AM460_RS11985 9c41cf092e64f7d96c6922f164d7a6cd 344 Pfam PF06804 NlpB/DapX lipoprotein 41 342 4.8E-112 T 29-03-2018 IPR010653 NlpB/DapX lipoprotein AM460_RS11985 9c41cf092e64f7d96c6922f164d7a6cd 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 39.428 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC AM460_RS11985 9c41cf092e64f7d96c6922f164d7a6cd 344 PIRSF PIRSF026343 9 344 1.5E-149 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC AM460_RS05090 356a2806ae3e8903ebbc70389d6e1041 352 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 7 344 1.4E-184 T 29-03-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative AM460_RS05090 356a2806ae3e8903ebbc70389d6e1041 352 Gene3D G3DSA:3.40.50.2000 164 347 2.7E-41 T 29-03-2018 AM460_RS05090 356a2806ae3e8903ebbc70389d6e1041 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 326 1.2E-66 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM460_RS05090 356a2806ae3e8903ebbc70389d6e1041 352 Gene3D G3DSA:3.40.50.2000 2 163 4.0E-32 T 29-03-2018 AM460_RS05090 356a2806ae3e8903ebbc70389d6e1041 352 SUPERFAMILY SSF53756 6 344 3.14E-81 T 29-03-2018 AM460_RS08190 e933f38c54e844615df09466b8372c27 122 Gene3D G3DSA:3.30.1130.10 1 122 2.4E-36 T 29-03-2018 AM460_RS08190 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.8E-27 T 29-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM460_RS08190 e933f38c54e844615df09466b8372c27 122 Pfam PF02152 Dihydroneopterin aldolase 4 113 5.9E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM460_RS08190 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 5.5E-42 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM460_RS08190 e933f38c54e844615df09466b8372c27 122 SMART SM00905 4 114 5.9E-46 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM460_RS08190 e933f38c54e844615df09466b8372c27 122 SUPERFAMILY SSF55620 1 115 4.45E-36 T 29-03-2018 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 4.7E-148 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 2.2E-92 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS15440 f70aac4527569687127d7913888eeae9 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.7E-143 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM460_RS09400 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.40.1740.10 1 95 9.2E-28 T 29-03-2018 AM460_RS09400 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.40.1740.10 98 179 2.2E-12 T 29-03-2018 AM460_RS09400 fb8570c0e78a414e59aca3a077fd1ffa 187 SUPERFAMILY SSF143456 1 187 4.84E-66 T 29-03-2018 AM460_RS09400 fb8570c0e78a414e59aca3a077fd1ffa 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.8E-49 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 AM460_RS09400 fb8570c0e78a414e59aca3a077fd1ffa 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.617 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 AM460_RS08985 5198d0757651454be10d4713b3057232 305 SMART SM01130 4 293 1.6E-81 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS08985 5198d0757651454be10d4713b3057232 305 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM460_RS08985 5198d0757651454be10d4713b3057232 305 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 51.728 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 AM460_RS08985 5198d0757651454be10d4713b3057232 305 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS08985 5198d0757651454be10d4713b3057232 305 Gene3D G3DSA:3.20.20.70 3 297 5.5E-75 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS08985 5198d0757651454be10d4713b3057232 305 Pfam PF00701 Dihydrodipicolinate synthetase family 5 290 1.4E-93 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS08985 5198d0757651454be10d4713b3057232 305 PIRSF PIRSF001365 1 302 8.5E-74 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS08985 5198d0757651454be10d4713b3057232 305 SUPERFAMILY SSF51569 5 291 9.32E-79 T 29-03-2018 AM460_RS08985 5198d0757651454be10d4713b3057232 305 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 6 295 5.8E-131 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 AM460_RS08985 5198d0757651454be10d4713b3057232 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 5.9E-16 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS08985 5198d0757651454be10d4713b3057232 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 5.9E-16 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS08985 5198d0757651454be10d4713b3057232 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 5.9E-16 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS08985 5198d0757651454be10d4713b3057232 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 5.9E-16 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS09185 962ab1c38a2a140191b6d159f954c16e 186 Gene3D G3DSA:1.10.357.10 50 183 1.2E-13 T 29-03-2018 AM460_RS09185 962ab1c38a2a140191b6d159f954c16e 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 5.3E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS09185 962ab1c38a2a140191b6d159f954c16e 186 Gene3D G3DSA:1.10.10.60 2 49 1.0E-7 T 29-03-2018 AM460_RS09185 962ab1c38a2a140191b6d159f954c16e 186 SUPERFAMILY SSF48498 73 169 8.62E-13 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS09185 962ab1c38a2a140191b6d159f954c16e 186 SUPERFAMILY SSF46689 3 62 2.77E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS13045 f395b1e598d98bdb8b5b4fa96ec6f194 296 SUPERFAMILY SSF88713 85 266 1.72E-27 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS13045 f395b1e598d98bdb8b5b4fa96ec6f194 296 SUPERFAMILY SSF88713 14 41 1.72E-27 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS13045 f395b1e598d98bdb8b5b4fa96ec6f194 296 Pfam PF01522 Polysaccharide deacetylase 15 167 7.2E-13 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM460_RS13045 f395b1e598d98bdb8b5b4fa96ec6f194 296 Gene3D G3DSA:3.20.20.370 3 270 6.5E-29 T 29-03-2018 AM460_RS13045 f395b1e598d98bdb8b5b4fa96ec6f194 296 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 292 61.723 T 29-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 AM460_RS22945 2f3899690673291472829ac2422181d4 554 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 3.3E-128 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM460_RS22945 2f3899690673291472829ac2422181d4 554 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 0.0 T 29-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS22945 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS22945 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS22945 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS22945 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS22945 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:3.40.50.620 155 260 2.5E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS22945 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:3.40.50.620 42 154 8.0E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS22945 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:3.40.50.620 4 41 0.092 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS22945 2f3899690673291472829ac2422181d4 554 SUPERFAMILY SSF50715 340 547 6.8E-81 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS22945 2f3899690673291472829ac2422181d4 554 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.5E-63 T 29-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS22945 2f3899690673291472829ac2422181d4 554 SUPERFAMILY SSF52374 10 337 1.04E-103 T 29-03-2018 AM460_RS22945 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:2.40.240.10 348 461 5.6E-47 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS22945 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:2.40.240.10 462 547 8.5E-35 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS22945 2f3899690673291472829ac2422181d4 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS22945 2f3899690673291472829ac2422181d4 554 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.945 T 29-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AM460_RS22945 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:1.10.1160.10 261 338 4.7E-36 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 1.1E-13 T 29-03-2018 AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:1.10.10.10 6 57 2.4E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 SMART SM00344 6 113 7.8E-45 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 6.8E-18 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:3.30.70.920 59 150 2.5E-20 T 29-03-2018 AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.7E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.7E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.7E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF54909 68 152 2.28E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS04475 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF46785 4 66 1.06E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15625 10bf2b136d7e76cf4539f28f5a1cddd6 131 SUPERFAMILY SSF161084 4 127 4.97E-31 T 29-03-2018 AM460_RS15625 10bf2b136d7e76cf4539f28f5a1cddd6 131 Pfam PF01124 MAPEG family 3 120 1.9E-26 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AM460_RS15625 10bf2b136d7e76cf4539f28f5a1cddd6 131 Gene3D G3DSA:1.20.120.550 1 127 5.9E-25 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AM460_RS11660 fcd78820a9ba8a92b3f5611c8e0d2de0 397 Gene3D G3DSA:3.30.420.40 203 397 3.1E-34 T 29-03-2018 AM460_RS11660 fcd78820a9ba8a92b3f5611c8e0d2de0 397 Pfam PF00480 ROK family 116 337 3.5E-32 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS11660 fcd78820a9ba8a92b3f5611c8e0d2de0 397 SUPERFAMILY SSF46785 10 68 3.49E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11660 fcd78820a9ba8a92b3f5611c8e0d2de0 397 SUPERFAMILY SSF53067 206 392 2.13E-35 T 29-03-2018 AM460_RS11660 fcd78820a9ba8a92b3f5611c8e0d2de0 397 Gene3D G3DSA:3.30.420.40 63 202 5.4E-14 T 29-03-2018 AM460_RS11660 fcd78820a9ba8a92b3f5611c8e0d2de0 397 SUPERFAMILY SSF53067 81 202 1.3E-16 T 29-03-2018 AM460_RS11660 fcd78820a9ba8a92b3f5611c8e0d2de0 397 Gene3D G3DSA:1.10.10.10 8 62 1.6E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22915 0782f6f252c33425908184b0f367952b 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 4.8E-10 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM460_RS22915 0782f6f252c33425908184b0f367952b 97 Gene3D G3DSA:1.10.1220.10 50 90 2.2E-8 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS22915 0782f6f252c33425908184b0f367952b 97 SUPERFAMILY SSF47598 51 86 5.78E-5 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 1.2E-101 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 SUPERFAMILY SSF48179 283 484 4.42E-68 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 Gene3D G3DSA:1.10.1040.10 282 486 2.6E-68 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 24 188 7.3E-54 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 1.9E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 PRINTS PR00084 Mannitol dehydrogenase signature 25 35 1.9E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 1.9E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 1.9E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 Gene3D G3DSA:3.40.50.720 2 281 1.5E-106 T 29-03-2018 AM460_RS00810 7536b324059c5f7ede2fa2124d14c56f 486 SUPERFAMILY SSF51735 10 281 4.72E-95 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 61.452 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 1.8E-26 T 29-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 152 3.3E-49 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 SUPERFAMILY SSF55252 82 151 4.45E-20 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.3E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.3E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.3E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.3E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 SUPERFAMILY SSF46785 3 77 1.81E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 3.0E-31 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 5.8E-23 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 Gene3D G3DSA:1.10.10.10 5 69 1.2E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07290 e663300a64090f6c6d262c2c5a29ab77 156 Gene3D G3DSA:3.30.1360.40 76 151 1.2E-26 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM460_RS25700 df913a3d1abf25322b604f6a27a83f83 308 Gene3D G3DSA:3.40.50.300 1 259 4.2E-63 T 29-03-2018 AM460_RS25700 df913a3d1abf25322b604f6a27a83f83 308 Pfam PF00005 ABC transporter 21 165 3.1E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS25700 df913a3d1abf25322b604f6a27a83f83 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS25700 df913a3d1abf25322b604f6a27a83f83 308 SMART SM00382 30 213 3.7E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS25700 df913a3d1abf25322b604f6a27a83f83 308 SUPERFAMILY SSF52540 3 232 2.77E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 5.3E-129 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 SUPERFAMILY SSF52317 3 191 1.38E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.5E-54 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 5.4E-5 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 5.4E-5 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 9.9E-44 T 29-03-2018 IPR017926 Glutamine amidotransferase AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.4E-33 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.4E-33 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.4E-33 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.4E-33 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.4E-33 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.4E-33 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 SUPERFAMILY SSF52418 269 527 1.01E-90 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 Gene3D G3DSA:3.40.1030.10 276 530 1.4E-90 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 Gene3D G3DSA:1.20.970.10 193 275 3.8E-16 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.3E-12 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.3E-12 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.3E-12 T 29-03-2018 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 SUPERFAMILY SSF47648 200 266 4.45E-16 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 2.0E-14 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 Gene3D G3DSA:3.40.50.880 1 192 5.0E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 4.9E-101 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS18360 24e359b722984e62bdeca97527a9252a 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.519 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 SUPERFAMILY SSF52172 6 192 5.69E-40 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 Pfam PF02954 Bacterial regulatory protein, Fis family 400 439 8.5E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 Gene3D G3DSA:1.10.10.60 398 443 6.2E-14 T 29-03-2018 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 SMART SM00382 167 310 6.5E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 3.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 3.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 SUPERFAMILY SSF52540 147 376 4.22E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 SMART SM00448 8 119 6.9E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 Gene3D G3DSA:3.40.50.2300 5 144 4.3E-29 T 29-03-2018 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 Gene3D G3DSA:1.10.8.60 319 397 2.7E-20 T 29-03-2018 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 Pfam PF00072 Response regulator receiver domain 10 119 1.6E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 Gene3D G3DSA:3.40.50.300 145 318 1.2E-25 T 29-03-2018 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 Pfam PF00158 Sigma-54 interaction domain 147 313 3.8E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS02650 569b7720ff1ca0b3c6599023f46196a8 452 SUPERFAMILY SSF46689 360 441 5.38E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS00760 e5523bed26c12176f3b769923571ce6b 184 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 8 182 33.598 T 29-03-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 AM460_RS00760 e5523bed26c12176f3b769923571ce6b 184 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 11 175 5.6E-38 T 29-03-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 AM460_RS00760 e5523bed26c12176f3b769923571ce6b 184 SUPERFAMILY SSF56399 12 183 2.22E-54 T 29-03-2018 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 SUPERFAMILY SSF63520 191 294 2.75E-18 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Pfam PF08279 HTH domain 7 63 1.7E-8 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 SUPERFAMILY SSF63520 314 417 4.45E-19 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Gene3D G3DSA:1.10.10.10 91 158 4.5E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Gene3D G3DSA:1.10.10.10 1 69 1.9E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Pfam PF05043 Mga helix-turn-helix domain 99 169 2.2E-6 T 29-03-2018 IPR007737 Mga helix-turn-helix domain AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Pfam PF00874 PRD domain 209 294 5.9E-10 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Pfam PF00874 PRD domain 324 413 2.4E-16 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 SUPERFAMILY SSF46785 2 48 2.57E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Gene3D G3DSA:1.10.1790.10 199 299 1.3E-16 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Gene3D G3DSA:3.40.50.2300 418 507 2.1E-19 T 29-03-2018 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 Gene3D G3DSA:1.10.1790.10 310 417 3.3E-23 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS04935 c0e66a68aa73ce2d109ecf8e6f751430 517 SUPERFAMILY SSF52794 421 501 8.89E-12 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.3E-69 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 Gene3D G3DSA:3.30.420.10 2 159 1.7E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 29-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.3E-45 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 7.3E-45 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.3E-45 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.3E-45 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.3E-45 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 SUPERFAMILY SSF53098 3 156 1.87E-56 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.69 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS15655 539598d2fa64fa2ffaa2e499b33e63ab 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 2.8E-88 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM460_RS13270 81fce031a78668643fa7c030a082777d 216 Gene3D G3DSA:2.60.120.590 11 216 1.0E-53 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AM460_RS13270 81fce031a78668643fa7c030a082777d 216 SUPERFAMILY SSF51197 16 212 1.92E-62 T 29-03-2018 AM460_RS13270 81fce031a78668643fa7c030a082777d 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 18 210 1.4E-55 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AM460_RS13270 81fce031a78668643fa7c030a082777d 216 TIGRFAM TIGR00568 alkb: alkylated DNA repair protein AlkB 22 189 3.9E-76 T 29-03-2018 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 SUPERFAMILY SSF50494 47 254 7.81E-61 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS07300 e2842633a160250aea968b948d3c8404 355 SMART SM00228 257 339 1.9E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 Gene3D G3DSA:2.40.10.10 152 258 4.0E-31 T 29-03-2018 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 SUPERFAMILY SSF50156 256 352 7.76E-21 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 Gene3D G3DSA:2.40.10.10 42 151 4.3E-31 T 29-03-2018 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 Gene3D G3DSA:2.30.42.10 259 355 1.2E-22 T 29-03-2018 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 2.9E-182 T 29-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 Pfam PF13365 Trypsin-like peptidase domain 80 215 1.8E-29 T 29-03-2018 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 Pfam PF13180 PDZ domain 279 347 5.4E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 7.9E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 7.9E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 7.9E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 7.9E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 7.9E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS07300 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 7.9E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM460_RS05120 0fa99629a7cb459e3e106edc3c3548b4 338 SUPERFAMILY SSF53448 29 295 2.5E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS05120 0fa99629a7cb459e3e106edc3c3548b4 338 Pfam PF08437 Glycosyl transferase family 8 C-terminal 278 334 2.0E-21 T 29-03-2018 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 AM460_RS05120 0fa99629a7cb459e3e106edc3c3548b4 338 Gene3D G3DSA:3.90.550.10 28 301 6.8E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS05120 0fa99629a7cb459e3e106edc3c3548b4 338 Pfam PF01501 Glycosyl transferase family 8 29 276 6.2E-59 T 29-03-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 AM460_RS04040 8db6201a05d66e8c6694369a8f78b981 266 SUPERFAMILY SSF56784 1 264 8.13E-69 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04040 8db6201a05d66e8c6694369a8f78b981 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 AM460_RS04040 8db6201a05d66e8c6694369a8f78b981 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 2.1E-70 T 29-03-2018 IPR000150 Cof family GO:0016787 AM460_RS04040 8db6201a05d66e8c6694369a8f78b981 266 Gene3D G3DSA:3.40.50.1000 2 266 1.5E-37 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04040 8db6201a05d66e8c6694369a8f78b981 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 29-03-2018 AM460_RS04040 8db6201a05d66e8c6694369a8f78b981 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.3E-26 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS04040 8db6201a05d66e8c6694369a8f78b981 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.9E-62 T 29-03-2018 IPR023214 HAD-like domain AM460_RS17125 a07f7470e4a8752c31262d40de149de2 406 Gene3D G3DSA:3.30.420.40 206 395 6.6E-40 T 29-03-2018 AM460_RS17125 a07f7470e4a8752c31262d40de149de2 406 SUPERFAMILY SSF46785 12 77 1.18E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17125 a07f7470e4a8752c31262d40de149de2 406 Gene3D G3DSA:1.10.10.10 11 77 5.0E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17125 a07f7470e4a8752c31262d40de149de2 406 Pfam PF00480 ROK family 90 389 4.4E-52 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS17125 a07f7470e4a8752c31262d40de149de2 406 Gene3D G3DSA:3.30.420.40 78 205 2.3E-16 T 29-03-2018 AM460_RS17125 a07f7470e4a8752c31262d40de149de2 406 SUPERFAMILY SSF53067 87 391 3.27E-45 T 29-03-2018 AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 SUPERFAMILY SSF69279 200 375 6.63E-50 T 29-03-2018 AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 Gene3D G3DSA:4.10.180.10 291 306 6.1E-9 T 29-03-2018 AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 SUPERFAMILY SSF69255 377 464 3.66E-25 T 29-03-2018 AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 24 508 4.8E-74 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 Gene3D G3DSA:3.55.50.10 108 204 6.4E-28 T 29-03-2018 AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 Pfam PF05954 Phage late control gene D protein (GPD) 32 348 2.0E-62 T 29-03-2018 AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 SUPERFAMILY SSF69279 14 189 1.47E-50 T 29-03-2018 AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 Gene3D G3DSA:2.40.50.230 382 466 2.7E-22 T 29-03-2018 IPR006531 Gp5 N-terminal AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 605 745 8.7E-50 T 29-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 25 510 5.2E-140 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM460_RS10125 a9c41543fa2e6c1708e1c5d28fd5cc24 837 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 484 586 1.0E-33 T 29-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.0E-65 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.778 T 29-03-2018 IPR026562 Probable transcriptional regulatory protein YeeN AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 Gene3D G3DSA:3.30.70.980 80 174 7.0E-24 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 Gene3D G3DSA:3.30.70.980 181 236 5.1E-7 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 Pfam PF01709 Transcriptional regulator 4 235 1.0E-78 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 SUPERFAMILY SSF75625 2 235 2.49E-77 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 Gene3D G3DSA:1.10.10.200 2 76 2.1E-24 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AM460_RS14650 eb9e1e97220339695f03767fab7500d1 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.077 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 SUPERFAMILY SSF103473 4 290 1.96E-27 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 457 3.3E-80 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 SUPERFAMILY SSF103473 213 472 6.28E-5 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 Gene3D G3DSA:1.20.1250.20 260 485 7.3E-6 T 29-03-2018 AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 Gene3D G3DSA:1.20.1250.20 2 191 1.6E-27 T 29-03-2018 AM460_RS02120 55cbfb1765fa3dd4aaa0ec13787026c2 485 Pfam PF00854 POT family 76 437 6.2E-90 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 Pfam PF05638 Type VI secretion system effector, Hcp 28 138 3.7E-12 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 Gene3D G3DSA:2.30.110.20 2 147 7.1E-31 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 SUPERFAMILY SSF69369 285 477 5.62E-41 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 5 146 6.3E-36 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 SUPERFAMILY SSF54060 453 590 7.06E-42 T 29-03-2018 AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 Pfam PF06958 S-type Pyocin 309 450 1.6E-38 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 Gene3D G3DSA:3.90.540.10 455 591 2.2E-41 T 29-03-2018 AM460_RS25820 68cb24ac45df1fa94d4b24d5c1e63ebc 593 SUPERFAMILY SSF141452 6 156 1.7E-27 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS17940 a37736220218064d6f22d5e0665062fb 342 SUPERFAMILY SSF111369 184 274 4.58E-12 T 29-03-2018 AM460_RS17940 a37736220218064d6f22d5e0665062fb 342 Pfam PF00529 HlyD membrane-fusion protein of T1SS 21 340 3.5E-8 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS17940 a37736220218064d6f22d5e0665062fb 342 Gene3D G3DSA:1.20.1600.10 29 338 1.3E-28 T 29-03-2018 AM460_RS17940 a37736220218064d6f22d5e0665062fb 342 SUPERFAMILY SSF111369 46 101 1.06E-8 T 29-03-2018 AM460_RS17940 a37736220218064d6f22d5e0665062fb 342 SUPERFAMILY SSF111369 137 170 1.06E-8 T 29-03-2018 AM460_RS17940 a37736220218064d6f22d5e0665062fb 342 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 289 1.3E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 7.5E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 SUPERFAMILY SSF46894 139 234 2.72E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 SMART SM00862 157 233 2.0E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 Gene3D G3DSA:3.40.50.2300 1 129 2.0E-26 T 29-03-2018 AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 SMART SM00448 2 112 4.9E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 SUPERFAMILY SSF52172 2 120 2.85E-29 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS17040 ea2a71c755b0f63792ea01673f8d8145 239 Gene3D G3DSA:1.10.10.10 130 239 1.4E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12020 da8670a03e7ac4f5eb51931773df3f4a 118 Gene3D G3DSA:3.40.30.10 1 116 4.9E-36 T 29-03-2018 AM460_RS12020 da8670a03e7ac4f5eb51931773df3f4a 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 115 2.5E-34 T 29-03-2018 IPR006504 Transcriptional regulator Spx/MgsR AM460_RS12020 da8670a03e7ac4f5eb51931773df3f4a 118 SUPERFAMILY SSF52833 1 115 7.91E-32 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS12020 da8670a03e7ac4f5eb51931773df3f4a 118 Pfam PF03960 ArsC family 5 114 1.6E-17 T 29-03-2018 IPR006660 Arsenate reductase-like AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82714 182 271 4.45E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 136 182 3.14E-29 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 274 330 3.14E-29 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:1.20.1640.10 821 1031 5.0E-38 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.2090.10 180 275 2.9E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82714 725 810 1.18E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82866 808 1031 1.57E-44 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 38 132 3.77E-28 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:1.20.1640.10 287 510 9.9E-44 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82866 296 497 1.11E-47 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.70.1440 673 770 7.5E-19 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.70.1430 38 140 1.5E-30 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.70.1430 568 669 3.0E-21 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 566 670 2.93E-32 T 29-03-2018 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS07095 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS01440 055ef3308c63f278ed208912183b7901 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 150 2.9E-62 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS01440 055ef3308c63f278ed208912183b7901 150 SUPERFAMILY SSF51197 1 149 5.77E-43 T 29-03-2018 AM460_RS01440 055ef3308c63f278ed208912183b7901 150 Gene3D G3DSA:2.60.120.370 1 150 1.2E-57 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS01440 055ef3308c63f278ed208912183b7901 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 4.7E-44 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS18915 8ba389f09f885978fc735451fb69ceb2 428 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 3 427 6.1E-226 T 29-03-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related AM460_RS18915 8ba389f09f885978fc735451fb69ceb2 428 Gene3D G3DSA:3.40.50.980 102 257 3.2E-6 T 29-03-2018 AM460_RS14840 3b05598e9528ccacf0a51f6b1ee989d8 156 Pfam PF03852 DNA mismatch endonuclease Vsr 3 74 1.6E-39 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM460_RS14840 3b05598e9528ccacf0a51f6b1ee989d8 156 PIRSF PIRSF018267 1 150 8.9E-52 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM460_RS14840 3b05598e9528ccacf0a51f6b1ee989d8 156 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.1E-54 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM460_RS14840 3b05598e9528ccacf0a51f6b1ee989d8 156 Gene3D G3DSA:3.40.960.10 21 156 4.0E-34 T 29-03-2018 AM460_RS14840 3b05598e9528ccacf0a51f6b1ee989d8 156 SUPERFAMILY SSF52980 2 153 2.47E-54 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS01110 a270dd5254c61488f720fbe70a48c3c6 126 Gene3D G3DSA:1.10.10.10 7 73 1.0E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01110 a270dd5254c61488f720fbe70a48c3c6 126 SUPERFAMILY SSF46689 14 64 2.69E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS01110 a270dd5254c61488f720fbe70a48c3c6 126 Pfam PF01527 Transposase 15 85 1.9E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 Pfam PF01979 Amidohydrolase family 53 410 1.3E-51 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 SUPERFAMILY SSF51556 56 353 4.4E-55 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 SUPERFAMILY SSF51338 1 56 6.97E-27 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 SUPERFAMILY SSF51338 361 435 6.97E-27 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 Gene3D G3DSA:3.20.20.140 66 351 1.8E-27 T 29-03-2018 AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 1.2E-222 T 29-03-2018 IPR017700 Putative aminohydrolase SsnA AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 Gene3D G3DSA:2.30.40.10 352 439 1.0E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS09790 5517d6feb0b2c60e084a39b4d8ce688c 442 Gene3D G3DSA:2.30.40.10 1 65 2.8E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS00990 dacaf16b0df5a17a61b73dd1841c3a99 122 SUPERFAMILY SSF143737 7 118 1.09E-55 T 29-03-2018 AM460_RS00990 dacaf16b0df5a17a61b73dd1841c3a99 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 3.9E-51 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 AM460_RS00990 dacaf16b0df5a17a61b73dd1841c3a99 122 Gene3D G3DSA:3.30.450.20 27 119 1.9E-52 T 29-03-2018 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 Pfam PF01817 Chorismate mutase type II 11 89 4.6E-17 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 Gene3D G3DSA:3.30.70.260 288 383 4.8E-24 T 29-03-2018 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 Gene3D G3DSA:1.20.59.10 1 112 6.9E-30 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 SMART SM00830 11 91 8.1E-25 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 SUPERFAMILY SSF48600 6 93 1.21E-22 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 SUPERFAMILY SSF55021 280 377 7.94E-22 T 29-03-2018 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 Gene3D G3DSA:3.40.190.10 198 273 7.6E-25 T 29-03-2018 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 Gene3D G3DSA:3.40.190.10 113 197 5.0E-31 T 29-03-2018 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 Pfam PF00800 Prephenate dehydratase 106 286 4.0E-61 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 1.3E-41 T 29-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 SUPERFAMILY SSF53850 105 291 2.39E-55 T 29-03-2018 AM460_RS11385 a0613ff1858ea6412fef0cc0413e960d 386 PIRSF PIRSF001500 1 380 6.1E-145 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 3.6E-237 T 29-03-2018 IPR024590 RNA helicase HrpA, C-terminal AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 SMART SM00847 464 559 9.0E-39 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 622 698 1.4E-19 T 29-03-2018 IPR011709 Domain of unknown function DUF1605 AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 Pfam PF00271 Helicase conserved C-terminal domain 285 403 1.3E-11 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 SMART SM00382 92 384 6.2E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 SMART SM00490 304 404 1.0E-15 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 29-03-2018 IPR010222 RNA helicase HrpA GO:0004004 AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 SMART SM00487 75 259 5.0E-27 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 Pfam PF00270 DEAD/DEAH box helicase 85 233 5.5E-6 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 Gene3D G3DSA:3.40.50.300 76 235 2.5E-29 T 29-03-2018 AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 Gene3D G3DSA:3.40.50.300 253 424 2.5E-46 T 29-03-2018 AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 SUPERFAMILY SSF52540 74 601 1.73E-111 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS17805 3793832cf4242306fbaa32027dc41252 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 1.5E-17 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 SUPERFAMILY SSF53098 3 389 5.6E-98 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 Gene3D G3DSA:3.30.420.10 151 347 2.8E-42 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 ProSitePatterns PS00116 DNA polymerase family B signature. 543 551 - T 29-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 204 296 1.1E-6 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 164 1.1E-4 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 7.0E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 489 501 7.0E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 541 549 7.0E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 Pfam PF00136 DNA polymerase family B 382 735 6.5E-42 T 29-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 SUPERFAMILY SSF56672 394 783 8.9E-116 T 29-03-2018 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 Gene3D G3DSA:3.90.1600.10 404 636 6.2E-52 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS26110 249f911c1fb72c8592f207e2146a9467 783 SMART SM00486 148 555 9.6E-83 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS18070 f5a49eab240038eb8e05f1a29e14c673 350 Gene3D G3DSA:3.40.50.720 166 277 4.7E-18 T 29-03-2018 AM460_RS18070 f5a49eab240038eb8e05f1a29e14c673 350 Gene3D G3DSA:3.90.180.10 1 165 3.1E-22 T 29-03-2018 AM460_RS18070 f5a49eab240038eb8e05f1a29e14c673 350 SUPERFAMILY SSF51735 136 285 3.94E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18070 f5a49eab240038eb8e05f1a29e14c673 350 Pfam PF00107 Zinc-binding dehydrogenase 168 282 6.7E-26 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS18070 f5a49eab240038eb8e05f1a29e14c673 350 SUPERFAMILY SSF50129 1 167 4.02E-11 T 29-03-2018 IPR011032 GroES-like AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 Pfam PF13247 4Fe-4S dicluster domain 116 196 3.5E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 Gene3D G3DSA:3.30.70.20 161 185 4.4E-11 T 29-03-2018 AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 Gene3D G3DSA:3.30.70.20 131 160 8.1E-10 T 29-03-2018 AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 Gene3D G3DSA:3.30.70.20 73 130 5.0E-11 T 29-03-2018 AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 SUPERFAMILY SSF54862 61 205 3.84E-36 T 29-03-2018 AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 Gene3D G3DSA:3.30.70.20 186 208 1.8E-5 T 29-03-2018 AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 Pfam PF12800 4Fe-4S binding domain 67 78 0.075 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 156 167 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS16670 07593b3c8dc61eda492bfed5ad3ea771 208 Gene3D G3DSA:3.30.70.20 38 72 0.039 T 29-03-2018 AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 3.5E-26 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 SUPERFAMILY SSF101801 54 135 4.32E-27 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.8E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.8E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.8E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.8E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 128 8.6E-34 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 Gene3D G3DSA:2.30.330.10 46 137 1.0E-30 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS14910 a6af0ba04112c1eb429ecb1c5ba508ed 137 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 49 7.1E-18 T 29-03-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 2.0E-15 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 SUPERFAMILY SSF46689 380 469 5.38E-24 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:3.40.50.2300 2 136 9.6E-39 T 29-03-2018 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:1.10.8.60 313 382 3.9E-22 T 29-03-2018 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 Pfam PF00158 Sigma-54 interaction domain 140 306 1.5E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 9.9E-249 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 SMART SM00382 160 311 5.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:3.40.50.300 137 312 3.1E-28 T 29-03-2018 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 SUPERFAMILY SSF52172 6 185 7.26E-49 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 SMART SM00448 4 115 1.1E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 Pfam PF00072 Response regulator receiver domain 6 115 6.0E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 SUPERFAMILY SSF52540 139 382 9.46E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03750 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:1.10.10.60 383 469 9.2E-27 T 29-03-2018 AM460_RS26490 c6cb0588970e237d8064bdc295bf1036 204 Pfam PF08805 PilS N terminal 54 203 6.5E-41 T 29-03-2018 IPR014911 Type 4 secretion system, PilS, N-terminal AM460_RS26490 c6cb0588970e237d8064bdc295bf1036 204 SUPERFAMILY SSF54523 52 204 7.85E-49 T 29-03-2018 AM460_RS26490 c6cb0588970e237d8064bdc295bf1036 204 Gene3D G3DSA:3.30.1690.10 57 204 1.5E-31 T 29-03-2018 AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 SUPERFAMILY SSF54211 230 485 1.44E-103 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 Gene3D G3DSA:1.20.120.20 224 566 5.4E-4 T 29-03-2018 AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 4.7E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 29-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 33.245 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 SMART SM00387 27 184 1.1E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 SUPERFAMILY SSF55874 4 213 1.22E-67 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 SUPERFAMILY SSF110942 510 623 1.7E-34 T 29-03-2018 AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 Pfam PF00183 Hsp90 protein 212 622 1.3E-124 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 Gene3D G3DSA:3.30.565.10 29 222 4.9E-54 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.3E-64 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.3E-64 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.3E-64 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 2.3E-64 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.3E-64 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.3E-64 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.3E-64 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM460_RS23990 5b0eebf753ccb190e255f37178212f59 624 PIRSF PIRSF002583 1 624 7.9E-221 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM460_RS26930 be1c7c573fd5dae4b49fbcaebd5af9dd 259 Gene3D G3DSA:1.10.443.10 37 245 4.7E-28 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS26930 be1c7c573fd5dae4b49fbcaebd5af9dd 259 PIRSF PIRSF004576 4 257 2.2E-115 T 29-03-2018 IPR016423 Resolvase, Rsv AM460_RS26930 be1c7c573fd5dae4b49fbcaebd5af9dd 259 SUPERFAMILY SSF56349 39 233 2.18E-27 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS26930 be1c7c573fd5dae4b49fbcaebd5af9dd 259 Pfam PF00589 Phage integrase family 41 232 2.0E-44 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 Gene3D G3DSA:3.90.650.10 145 322 4.6E-48 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.431 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 5.6E-120 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 PIRSF PIRSF005303 1 322 3.9E-87 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 SUPERFAMILY SSF56042 143 307 1.38E-40 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 299 1.9E-9 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 SUPERFAMILY SSF55326 4 138 1.41E-34 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 Gene3D G3DSA:3.30.1330.10 1 142 7.6E-35 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS24285 dad5c3404a7cbb501851087af9277516 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 4.4E-21 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 SUPERFAMILY SSF51569 1 290 3.85E-97 T 29-03-2018 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 SMART SM00917 369 500 4.0E-37 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 SUPERFAMILY SSF110921 391 499 6.8E-26 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 Pfam PF00682 HMGL-like 4 273 8.3E-106 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 Gene3D G3DSA:3.20.20.70 1 331 1.5E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 7.0E-36 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.753 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM460_RS26015 4e85f93cfd9c6a4e1bbe509817c3f728 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 1.4E-260 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 Pfam PF00005 ABC transporter 285 442 2.2E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 Pfam PF00005 ABC transporter 33 182 7.3E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 SUPERFAMILY SSF52540 17 235 1.54E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 Gene3D G3DSA:3.40.50.300 15 241 2.0E-53 T 29-03-2018 AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 Gene3D G3DSA:3.40.50.300 265 508 2.3E-38 T 29-03-2018 AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 SUPERFAMILY SSF52540 257 502 5.04E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 SMART SM00382 294 491 3.8E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS23525 f52232bc0156e032f3cb390de8e860da 514 SMART SM00382 42 230 1.8E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 Gene3D G3DSA:3.50.50.60 5 159 2.7E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 2.2E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.4E-8 T 29-03-2018 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.4E-8 T 29-03-2018 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.4E-8 T 29-03-2018 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 SUPERFAMILY SSF51905 6 345 4.38E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 Gene3D G3DSA:3.50.50.60 168 370 1.6E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.6E-15 T 29-03-2018 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.6E-15 T 29-03-2018 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.6E-15 T 29-03-2018 AM460_RS20020 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-15 T 29-03-2018 AM460_RS27720 358c1d15476b0bb89e55b49c19c4e235 72 Pfam PF07362 Post-segregation antitoxin CcdA 2 72 1.8E-25 T 29-03-2018 IPR009956 Post-segregation antitoxin CcdA AM460_RS03455 2f87c5e534abb0ce4d6ecd1bb6ec2f84 248 SUPERFAMILY SSF52343 103 248 9.04E-39 T 29-03-2018 AM460_RS03455 2f87c5e534abb0ce4d6ecd1bb6ec2f84 248 Gene3D G3DSA:3.40.50.80 97 248 1.0E-25 T 29-03-2018 AM460_RS03455 2f87c5e534abb0ce4d6ecd1bb6ec2f84 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 2.9E-20 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM460_RS03455 2f87c5e534abb0ce4d6ecd1bb6ec2f84 248 SUPERFAMILY SSF63380 3 100 1.43E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS03455 2f87c5e534abb0ce4d6ecd1bb6ec2f84 248 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 9.3E-8 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM460_RS03455 2f87c5e534abb0ce4d6ecd1bb6ec2f84 248 Gene3D G3DSA:2.40.30.10 1 96 5.8E-19 T 29-03-2018 AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 Gene3D G3DSA:3.40.50.720 39 265 1.7E-63 T 29-03-2018 AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 Gene3D G3DSA:3.40.50.720 1 38 7.7E-9 T 29-03-2018 AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.6E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.6E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.6E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.6E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.6E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 SUPERFAMILY SSF51735 6 264 2.8E-79 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS23535 6cf5a5eab64006ff08b46c3bb2086018 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 262 1.5E-60 T 29-03-2018 AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.2E-38 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 SUPERFAMILY SSF53155 9 91 7.45E-6 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 2.7E-20 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 40.614 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 Gene3D G3DSA:1.10.10.10 84 170 9.9E-37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 SUPERFAMILY SSF46767 86 169 8.5E-34 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS17960 6d46c043ac26f96f870efc1c8a95e57c 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.7E-35 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 57 75 2.0E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 157 179 2.0E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 2.0E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 103 125 2.0E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 2.0E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 273 292 2.0E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 103 113 4.0E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 4.0E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 159 170 4.0E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 4.0E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 4.0E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 317 333 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 SUPERFAMILY SSF56935 23 362 4.71E-81 T 29-03-2018 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 Gene3D G3DSA:2.40.160.10 11 362 1.0E-52 T 29-03-2018 AM460_RS20865 c2433c1230094b862cb394d3481099b3 362 Pfam PF00267 Gram-negative porin 28 362 8.1E-139 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS06115 6bff92cc40cf836faefe610f7836a4dc 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 32.632 T 29-03-2018 IPR032900 PanD regulatory factor PanM GO:0015940|GO:0031638 AM460_RS06115 6bff92cc40cf836faefe610f7836a4dc 127 SUPERFAMILY SSF55729 6 120 4.29E-9 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS06115 6bff92cc40cf836faefe610f7836a4dc 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 125 3.9E-50 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS06115 6bff92cc40cf836faefe610f7836a4dc 127 Gene3D G3DSA:3.40.630.30 1 127 1.3E-12 T 29-03-2018 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 SUPERFAMILY SSF118215 8 412 3.53E-121 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 48.988 T 29-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 1.1E-114 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 Gene3D G3DSA:1.10.3860.10 2 418 7.9E-123 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS02485 5a7b192224d5c6b14a3622c4163491bf 437 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 3.5E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS17430 eb913f0bc44e713d020e806533541517 385 Pfam PF04055 Radical SAM superfamily 11 174 1.9E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS17430 eb913f0bc44e713d020e806533541517 385 Gene3D G3DSA:3.20.20.70 7 335 1.5E-35 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS17430 eb913f0bc44e713d020e806533541517 385 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 2 364 1.7E-151 T 29-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AM460_RS17430 eb913f0bc44e713d020e806533541517 385 SUPERFAMILY SSF102114 10 328 2.62E-44 T 29-03-2018 AM460_RS17430 eb913f0bc44e713d020e806533541517 385 Pfam PF13353 4Fe-4S single cluster domain 11 132 6.5E-7 T 29-03-2018 AM460_RS17430 eb913f0bc44e713d020e806533541517 385 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 265 345 2.1E-18 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AM460_RS17430 eb913f0bc44e713d020e806533541517 385 Pfam PF13186 Iron-sulfur cluster-binding domain 263 318 1.4E-4 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AM460_RS17430 eb913f0bc44e713d020e806533541517 385 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 158 371 6.0E-13 T 29-03-2018 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 SUPERFAMILY SSF56024 190 358 9.42E-38 T 29-03-2018 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 383 51.909 T 29-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 Pfam PF13091 PLD-like domain 214 336 1.9E-25 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 Pfam PF13091 PLD-like domain 26 147 2.4E-14 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 SUPERFAMILY SSF56024 4 162 4.04E-39 T 29-03-2018 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 SMART SM00155 285 312 10.0 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 SMART SM00155 108 135 1.8E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 Gene3D G3DSA:3.30.870.10 193 364 8.5E-29 T 29-03-2018 AM460_RS22375 2c3af8fb2595aa42bff5def269a1af1f 413 Gene3D G3DSA:3.30.870.10 2 188 3.7E-29 T 29-03-2018 AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 SMART SM00357 5 69 3.2E-33 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 PIRSF PIRSF002599 1 69 3.1E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.4E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 29-03-2018 IPR019844 Cold-shock conserved site AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 SUPERFAMILY SSF50249 3 68 5.9E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS23265 a681313ba1313404e2556ff70a8ea5db 69 Gene3D G3DSA:2.40.50.140 1 69 4.3E-29 T 29-03-2018 AM460_RS22120 22be67e6895e23202ab193c299fc1509 371 Gene3D G3DSA:2.120.10.30 15 272 1.4E-44 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM460_RS22120 22be67e6895e23202ab193c299fc1509 371 Gene3D G3DSA:2.120.10.30 273 362 3.2E-17 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM460_RS22120 22be67e6895e23202ab193c299fc1509 371 SUPERFAMILY SSF50952 20 370 1.83E-41 T 29-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AM460_RS22120 22be67e6895e23202ab193c299fc1509 371 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 366 3.1E-130 T 29-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 Gene3D G3DSA:2.20.150.10 12 46 8.7E-11 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.9E-101 T 29-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 Gene3D G3DSA:3.40.1190.20 47 312 4.1E-54 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 PIRSF PIRSF000535 2 311 9.7E-119 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 2.0E-68 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 SUPERFAMILY SSF53613 7 290 1.87E-69 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.5E-99 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM460_RS13505 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS18955 da11db16b90d0c9b98b9deb569040ab4 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 1.1E-118 T 29-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM460_RS18955 da11db16b90d0c9b98b9deb569040ab4 463 SUPERFAMILY SSF103473 20 460 3.53E-36 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS18955 da11db16b90d0c9b98b9deb569040ab4 463 Pfam PF07690 Major Facilitator Superfamily 45 422 3.9E-15 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS18955 da11db16b90d0c9b98b9deb569040ab4 463 Gene3D G3DSA:1.20.1250.20 21 236 3.1E-15 T 29-03-2018 AM460_RS18955 da11db16b90d0c9b98b9deb569040ab4 463 Gene3D G3DSA:1.20.1250.20 244 463 9.8E-22 T 29-03-2018 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.9E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.9E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 2.9E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 29-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 SUPERFAMILY SSF51306 78 323 1.33E-84 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Pfam PF00717 Peptidase S24-like 86 159 1.4E-20 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Pfam PF10502 Signal peptidase, peptidase S26 261 302 2.5E-7 T 29-03-2018 IPR019533 Peptidase S26 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Gene3D G3DSA:2.10.109.10 76 320 2.1E-56 T 29-03-2018 AM460_RS11550 a54b8e4c2fafdbc49fb848c0b3564b5f 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 305 4.1E-43 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM460_RS18255 3d81a773365499dc7bc5c6607aeed35f 196 SUPERFAMILY SSF142695 3 173 4.18E-67 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM460_RS18255 3d81a773365499dc7bc5c6607aeed35f 196 Pfam PF00925 GTP cyclohydrolase II 5 170 8.1E-68 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM460_RS18255 3d81a773365499dc7bc5c6607aeed35f 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 7.0E-96 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM460_RS18255 3d81a773365499dc7bc5c6607aeed35f 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.843 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM460_RS00195 8eb820f2fc8c377771816bc5755a19ee 443 Pfam PF07804 HipA-like C-terminal domain 200 428 2.8E-20 T 29-03-2018 IPR012893 HipA-like, C-terminal AM460_RS00195 8eb820f2fc8c377771816bc5755a19ee 443 Gene3D G3DSA:1.10.10.10 1 38 0.0016 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06890 98f615537815942b22a86925403a8f47 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.942 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06890 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1370.30 1 66 2.5E-25 T 29-03-2018 AM460_RS06890 98f615537815942b22a86925403a8f47 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06890 98f615537815942b22a86925403a8f47 130 SUPERFAMILY SSF56047 5 129 4.97E-46 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06890 98f615537815942b22a86925403a8f47 130 Pfam PF00410 Ribosomal protein S8 5 129 4.9E-49 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06890 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1490.10 74 129 2.9E-22 T 29-03-2018 AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 Gene3D G3DSA:3.40.50.720 152 339 1.1E-29 T 29-03-2018 AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 Pfam PF00107 Zinc-binding dehydrogenase 180 302 5.5E-25 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 SUPERFAMILY SSF51735 142 310 2.84E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 SUPERFAMILY SSF50129 11 178 2.28E-48 T 29-03-2018 IPR011032 GroES-like AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 Gene3D G3DSA:3.90.180.10 2 151 1.9E-43 T 29-03-2018 AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 139 1.6E-29 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS16125 b8e76e20ebc78357a3fd0f046c54b67a 347 SMART SM00829 9 343 6.0E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS16745 6a663e41d5a28c7acd663cce9cef41ba 382 SUPERFAMILY SSF53335 117 373 4.53E-79 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS16745 6a663e41d5a28c7acd663cce9cef41ba 382 Gene3D G3DSA:3.40.50.150 105 372 8.1E-63 T 29-03-2018 AM460_RS16745 6a663e41d5a28c7acd663cce9cef41ba 382 PIRSF PIRSF003085 2 381 3.4E-130 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AM460_RS16745 6a663e41d5a28c7acd663cce9cef41ba 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 3.3E-106 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS08505 22ed00c04e2cf228cc5044dc8abb3b9a 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 4.0E-92 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS08505 22ed00c04e2cf228cc5044dc8abb3b9a 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS08505 22ed00c04e2cf228cc5044dc8abb3b9a 387 Gene3D G3DSA:3.40.50.1970 9 183 3.7E-42 T 29-03-2018 AM460_RS08505 22ed00c04e2cf228cc5044dc8abb3b9a 387 SUPERFAMILY SSF56796 1 385 2.62E-108 T 29-03-2018 AM460_RS08505 22ed00c04e2cf228cc5044dc8abb3b9a 387 Gene3D G3DSA:1.20.1090.10 184 387 2.2E-43 T 29-03-2018 AM460_RS08505 22ed00c04e2cf228cc5044dc8abb3b9a 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.8E-12 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.0E-301 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 SUPERFAMILY SSF52540 2 235 4.65E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Gene3D G3DSA:2.40.30.10 188 287 1.7E-26 T 29-03-2018 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.3E-49 T 29-03-2018 IPR013842 GTP-binding protein LepA, C-terminal AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Gene3D G3DSA:3.30.70.240 390 549 4.5E-25 T 29-03-2018 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 6.2E-53 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Gene3D G3DSA:3.40.50.300 1 185 3.6E-37 T 29-03-2018 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 SUPERFAMILY SSF54980 292 370 2.01E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.6 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.1E-16 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 SUPERFAMILY SSF54980 399 493 3.93E-24 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Pfam PF00679 Elongation factor G C-terminus 399 482 4.0E-19 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM460_RS11545 81793bcafb4dc5c4762e7ce75cfa3eb2 599 Gene3D G3DSA:3.30.70.870 288 367 1.3E-27 T 29-03-2018 AM460_RS22280 7f9fdda6e544a05ca90122a435d799fd 741 Gene3D G3DSA:2.30.30.60 575 622 5.0E-6 T 29-03-2018 AM460_RS22280 7f9fdda6e544a05ca90122a435d799fd 741 SUPERFAMILY SSF82689 627 722 2.62E-8 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM460_RS22280 7f9fdda6e544a05ca90122a435d799fd 741 SUPERFAMILY SSF50182 558 616 1.28E-9 T 29-03-2018 IPR010920 LSM domain AM460_RS22280 7f9fdda6e544a05ca90122a435d799fd 741 Gene3D G3DSA:3.30.70.100 626 713 1.3E-5 T 29-03-2018 AM460_RS22280 7f9fdda6e544a05ca90122a435d799fd 741 Pfam PF00924 Mechanosensitive ion channel 515 714 1.2E-43 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM460_RS22280 7f9fdda6e544a05ca90122a435d799fd 741 SUPERFAMILY SSF82861 477 556 3.66E-12 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 Gene3D G3DSA:3.40.50.1100 37 148 1.2E-30 T 29-03-2018 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 6.1E-78 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 SUPERFAMILY SSF55021 420 512 6.64E-26 T 29-03-2018 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.8E-29 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 3.4E-27 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 SUPERFAMILY SSF55021 336 423 2.75E-28 T 29-03-2018 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 Gene3D G3DSA:3.40.50.1100 149 330 2.6E-45 T 29-03-2018 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 Gene3D G3DSA:3.40.1020.10 338 513 2.0E-71 T 29-03-2018 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 SUPERFAMILY SSF53686 14 365 2.1E-101 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS04330 66c2f890ecbb00eeea3c7c7105da1ffa 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 2.2E-270 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM460_RS05110 27fafdf3dd375cc2d50357217f9c229c 359 Gene3D G3DSA:3.40.50.2000 1 176 1.1E-8 T 29-03-2018 AM460_RS05110 27fafdf3dd375cc2d50357217f9c229c 359 Pfam PF13439 Glycosyltransferase Family 4 13 165 5.1E-12 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM460_RS05110 27fafdf3dd375cc2d50357217f9c229c 359 SUPERFAMILY SSF53756 2 321 5.89E-50 T 29-03-2018 AM460_RS05110 27fafdf3dd375cc2d50357217f9c229c 359 Pfam PF00534 Glycosyl transferases group 1 175 323 1.4E-21 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM460_RS05110 27fafdf3dd375cc2d50357217f9c229c 359 Gene3D G3DSA:3.40.50.2000 177 333 1.3E-25 T 29-03-2018 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 Pfam PF00072 Response regulator receiver domain 8 117 2.4E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 Gene3D G3DSA:3.40.50.300 144 313 1.1E-30 T 29-03-2018 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 Gene3D G3DSA:1.10.8.60 314 390 4.3E-28 T 29-03-2018 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 SUPERFAMILY SSF52172 4 185 3.84E-48 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 441 2.9E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 2.9E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 Gene3D G3DSA:3.40.50.2300 3 143 1.6E-39 T 29-03-2018 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 Pfam PF00158 Sigma-54 interaction domain 141 307 5.6E-72 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 SUPERFAMILY SSF52540 141 385 9.88E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 Gene3D G3DSA:1.10.10.60 395 441 1.9E-16 T 29-03-2018 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 Pfam PF02954 Bacterial regulatory protein, Fis family 403 441 3.7E-15 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 SMART SM00448 6 117 2.0E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 SUPERFAMILY SSF46689 398 440 1.25E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03020 617e9cc81807510c96acad1b2fa58f76 441 SMART SM00382 161 304 5.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS07785 b334ecbd9cf0b39ca4c7607af0d66be7 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 1.6E-73 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM460_RS07785 b334ecbd9cf0b39ca4c7607af0d66be7 157 SUPERFAMILY SSF52728 3 156 2.75E-51 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS07785 b334ecbd9cf0b39ca4c7607af0d66be7 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 2.0E-50 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS07785 b334ecbd9cf0b39ca4c7607af0d66be7 157 Gene3D G3DSA:3.40.35.10 3 157 2.3E-56 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS04000 da7dd97a719ab1ff150d84c35f59bb79 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04000 da7dd97a719ab1ff150d84c35f59bb79 301 SUPERFAMILY SSF46785 4 81 8.71E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04000 da7dd97a719ab1ff150d84c35f59bb79 301 Gene3D G3DSA:3.40.190.10 90 180 2.7E-10 T 29-03-2018 AM460_RS04000 da7dd97a719ab1ff150d84c35f59bb79 301 Pfam PF03466 LysR substrate binding domain 89 292 4.3E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS04000 da7dd97a719ab1ff150d84c35f59bb79 301 Gene3D G3DSA:1.10.10.10 3 85 2.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04000 da7dd97a719ab1ff150d84c35f59bb79 301 Gene3D G3DSA:3.40.190.10 181 268 1.8E-6 T 29-03-2018 AM460_RS04000 da7dd97a719ab1ff150d84c35f59bb79 301 SUPERFAMILY SSF53850 89 292 1.16E-27 T 29-03-2018 AM460_RS12120 1bcf84fea824907c9d65055cc0a906ed 395 Gene3D G3DSA:1.20.1090.10 203 395 7.3E-56 T 29-03-2018 AM460_RS12120 1bcf84fea824907c9d65055cc0a906ed 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 7.8E-112 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS12120 1bcf84fea824907c9d65055cc0a906ed 395 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 191 219 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS12120 1bcf84fea824907c9d65055cc0a906ed 395 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 278 298 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS12120 1bcf84fea824907c9d65055cc0a906ed 395 Gene3D G3DSA:3.40.50.1970 6 202 4.1E-41 T 29-03-2018 AM460_RS12120 1bcf84fea824907c9d65055cc0a906ed 395 SUPERFAMILY SSF56796 22 393 2.09E-113 T 29-03-2018 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Gene3D G3DSA:2.30.38.10 526 612 4.2E-15 T 29-03-2018 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 SMART SM00563 30 140 2.5E-28 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Pfam PF01553 Acyltransferase 15 137 3.6E-19 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 SUPERFAMILY SSF69593 3 171 1.31E-21 T 29-03-2018 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Gene3D G3DSA:3.40.1130.10 2 208 2.3E-27 T 29-03-2018 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Gene3D G3DSA:3.40.50.980 209 375 1.1E-18 T 29-03-2018 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.101 T 29-03-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 SUPERFAMILY SSF56801 205 713 7.06E-94 T 29-03-2018 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Gene3D G3DSA:3.40.50.980 376 525 2.4E-42 T 29-03-2018 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Pfam PF00501 AMP-binding enzyme 233 619 3.7E-65 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS09920 ef7dcadb9eb933fa897068020123f81a 719 Gene3D G3DSA:3.30.300.30 613 717 2.3E-9 T 29-03-2018 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 Gene3D G3DSA:2.30.40.10 1 54 1.8E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 PIRSF PIRSF038971 1 378 6.4E-154 T 29-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 SUPERFAMILY SSF51338 1 50 1.37E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 SUPERFAMILY SSF51338 345 377 1.37E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 Gene3D G3DSA:3.20.20.140 55 303 2.0E-11 T 29-03-2018 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 Pfam PF07969 Amidohydrolase family 166 378 3.3E-12 T 29-03-2018 IPR013108 Amidohydrolase 3 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 SUPERFAMILY SSF51556 50 345 2.87E-22 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 Gene3D G3DSA:2.30.40.10 304 378 3.7E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS02360 b331152eddb7a3c295a262c72bf76a1e 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 4.6E-166 T 29-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 Gene3D G3DSA:3.30.420.40 1 242 3.7E-61 T 29-03-2018 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 440 2.4E-20 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 SUPERFAMILY SSF53067 4 252 1.94E-63 T 29-03-2018 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 PIRSF PIRSF000538 2 495 1.8E-99 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 SUPERFAMILY SSF53067 256 489 7.12E-52 T 29-03-2018 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 4.5E-94 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS05350 5ccf3eea806b9b612093554db1427bcf 498 Gene3D G3DSA:3.30.420.40 252 498 1.1E-46 T 29-03-2018 AM460_RS08855 2f4e7ceca9a02b7c8f288ea787c7c98b 161 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 64 161 5.0E-54 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS08855 2f4e7ceca9a02b7c8f288ea787c7c98b 161 Pfam PF03230 Antirestriction protein 66 161 1.6E-36 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 9.0E-30 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 SUPERFAMILY SSF159127 1 76 9.55E-24 T 29-03-2018 AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.4E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.4E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.4E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.4E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 Pfam PF01455 HupF/HypC family 1 72 3.8E-25 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM460_RS08605 3799010f2d3257da5915e46316f35c2e 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 29-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 SUPERFAMILY SSF56801 4 620 3.92E-157 T 29-03-2018 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 Gene3D G3DSA:2.30.38.10 402 493 1.7E-9 T 29-03-2018 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 Gene3D G3DSA:3.30.300.30 494 608 3.3E-24 T 29-03-2018 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 Gene3D G3DSA:3.40.50.980 49 241 3.8E-41 T 29-03-2018 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 Gene3D G3DSA:3.40.50.980 242 401 2.6E-31 T 29-03-2018 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 Pfam PF00501 AMP-binding enzyme 59 500 7.4E-81 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 628 0.0 T 29-03-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 57 8.8E-22 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM460_RS24645 5afdc5922b59aaf4346fa71950cf5e1b 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 592 4.8E-23 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 SUPERFAMILY SSF51161 2 262 7.54E-81 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 4.0E-113 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.5E-29 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.046 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:2.160.10.10 1 196 1.8E-44 T 29-03-2018 AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:1.20.1180.10 197 262 3.8E-24 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 PIRSF PIRSF000456 5 262 5.6E-108 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 3.8E-8 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.1E-9 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25400 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS06825 af999efcbd0a2375432bf21906bd585c 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.6E-75 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06825 af999efcbd0a2375432bf21906bd585c 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.976 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06825 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 141 199 1.5E-11 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM460_RS06825 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 4 140 7.2E-48 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM460_RS06825 af999efcbd0a2375432bf21906bd585c 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM460_RS06825 af999efcbd0a2375432bf21906bd585c 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.1E-64 T 29-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AM460_RS04450 b1b9f7d23edada9a147f74ad2de1134d 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.621 T 29-03-2018 IPR023064 D-ribose pyranase GO:0016872 AM460_RS04450 b1b9f7d23edada9a147f74ad2de1134d 139 Gene3D G3DSA:3.40.1650.10 1 139 1.6E-40 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM460_RS04450 b1b9f7d23edada9a147f74ad2de1134d 139 SUPERFAMILY SSF102546 1 139 3.53E-45 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM460_RS04450 b1b9f7d23edada9a147f74ad2de1134d 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.2E-48 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM460_RS00695 7159a6d571c89d1435d92b4b72e7a948 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 20 71 2.9E-19 T 29-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AM460_RS00695 7159a6d571c89d1435d92b4b72e7a948 112 Hamap MF_01193 Endoribonuclease SymE [symE]. 1 110 35.916 T 29-03-2018 IPR020883 Type I toxin-antitoxin system, SymE toxin GO:0003723|GO:0004521|GO:0005737|GO:0016070 AM460_RS06040 afa4b644c622adbe38f60ca339173efe 185 Gene3D G3DSA:3.40.1000.10 42 185 2.2E-15 T 29-03-2018 AM460_RS06040 afa4b644c622adbe38f60ca339173efe 185 Pfam PF08786 DcrB 51 181 2.5E-30 T 29-03-2018 IPR014894 Protein DcrB AM460_RS03560 5b38754576151a7e86c1de6cbb095763 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 3.2E-249 T 29-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 AM460_RS03560 5b38754576151a7e86c1de6cbb095763 419 Gene3D G3DSA:3.20.20.150 1 419 5.0E-110 T 29-03-2018 AM460_RS03560 5b38754576151a7e86c1de6cbb095763 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 278.438 T 29-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 AM460_RS03560 5b38754576151a7e86c1de6cbb095763 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 3.0E-238 T 29-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 AM460_RS03560 5b38754576151a7e86c1de6cbb095763 419 SUPERFAMILY SSF51658 4 418 1.81E-83 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS03560 5b38754576151a7e86c1de6cbb095763 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 29-03-2018 AM460_RS13725 cc5fa82533b305b97121f2d326409519 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 375 1.2E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS13725 cc5fa82533b305b97121f2d326409519 385 Gene3D G3DSA:1.10.3720.10 5 385 3.6E-23 T 29-03-2018 AM460_RS13725 cc5fa82533b305b97121f2d326409519 385 SUPERFAMILY SSF161098 173 371 1.06E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06755 b2d66f71281d4f02a1d425e14cd12a8f 387 Pfam PF05134 Type II secretion system (T2SS), protein L 6 232 2.7E-68 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AM460_RS06755 b2d66f71281d4f02a1d425e14cd12a8f 387 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 6 384 2.1E-109 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AM460_RS06755 b2d66f71281d4f02a1d425e14cd12a8f 387 SUPERFAMILY SSF53067 5 143 1.18E-23 T 29-03-2018 AM460_RS06755 b2d66f71281d4f02a1d425e14cd12a8f 387 Pfam PF12693 GspL periplasmic domain 240 384 2.3E-41 T 29-03-2018 IPR025691 GspL periplasmic domain AM460_RS11810 1b191014a633b5c1771193980a66d6a7 384 PIRSF PIRSF006004 11 378 4.0E-149 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS11810 1b191014a633b5c1771193980a66d6a7 384 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 364 75.927 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS11810 1b191014a633b5c1771193980a66d6a7 384 Pfam PF04055 Radical SAM superfamily 120 289 2.9E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS11810 1b191014a633b5c1771193980a66d6a7 384 Gene3D G3DSA:3.20.20.70 26 383 1.4E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS11810 1b191014a633b5c1771193980a66d6a7 384 SUPERFAMILY SSF102114 116 326 4.84E-16 T 29-03-2018 AM460_RS11810 1b191014a633b5c1771193980a66d6a7 384 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 369 2.4E-179 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 Gene3D G3DSA:3.40.50.720 1 164 1.8E-31 T 29-03-2018 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 SUPERFAMILY SSF51735 1 162 1.73E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 160 3.5E-45 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 PIRSF PIRSF000103 1 292 1.1E-115 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 SUPERFAMILY SSF48179 164 291 2.15E-29 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 Hamap MF_01913 3-sulfolactaldehyde reductase. 1 292 62.996 T 29-03-2018 IPR030876 3-sulfolactaldehyde reductase GO:0061596|GO:1902777 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|MetaCyc: PWY-7446 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 5.2E-24 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM460_RS03715 df438d96d040bdbf450dc54f58d85175 292 Gene3D G3DSA:1.10.1040.10 165 292 4.4E-25 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS01645 e182e2eb845270a8bcbd1103a8acf778 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 1.6E-20 T 29-03-2018 IPR019903 Repair of iron centres family AM460_RS01645 e182e2eb845270a8bcbd1103a8acf778 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 1.1E-27 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AM460_RS01645 e182e2eb845270a8bcbd1103a8acf778 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 1.0E-80 T 29-03-2018 IPR019903 Repair of iron centres family AM460_RS01645 e182e2eb845270a8bcbd1103a8acf778 220 Gene3D G3DSA:1.20.120.520 58 218 9.4E-32 T 29-03-2018 AM460_RS01645 e182e2eb845270a8bcbd1103a8acf778 220 Gene3D G3DSA:1.10.3910.10 3 57 3.9E-12 T 29-03-2018 AM460_RS01645 e182e2eb845270a8bcbd1103a8acf778 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 52.203 T 29-03-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 1.8E-29 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 Gene3D G3DSA:3.40.50.970 339 533 3.7E-42 T 29-03-2018 AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 SUPERFAMILY SSF52518 2 173 6.1E-43 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 SUPERFAMILY SSF52467 182 352 5.06E-43 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 SUPERFAMILY SSF52518 357 557 7.37E-60 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 2.4E-40 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 Gene3D G3DSA:3.40.50.970 1 189 1.9E-43 T 29-03-2018 AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.1E-41 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM460_RS21945 925a39570d4470f667a51c5a4fd4ecf8 572 Gene3D G3DSA:3.40.50.1220 190 338 8.4E-33 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS00005 e87aca3ea321fea33c0e36dae3b7c50c 54 Gene3D G3DSA:1.20.1530.10 1 52 3.1E-16 T 29-03-2018 IPR023171 Na/H antiporter domain AM460_RS00005 e87aca3ea321fea33c0e36dae3b7c50c 54 Pfam PF06965 Na+/H+ antiporter 1 1 46 1.1E-13 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM460_RS24790 29fe7ffcad2be15cbbc66f1abd8eab15 187 Pfam PF00589 Phage integrase family 4 175 6.4E-47 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS24790 29fe7ffcad2be15cbbc66f1abd8eab15 187 Gene3D G3DSA:1.10.443.10 4 182 1.2E-38 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS24790 29fe7ffcad2be15cbbc66f1abd8eab15 187 SUPERFAMILY SSF56349 4 178 2.44E-43 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS19315 1a80e822748dfe7c395b91773e376199 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM460_RS19315 1a80e822748dfe7c395b91773e376199 203 Gene3D G3DSA:1.10.530.10 21 203 3.8E-28 T 29-03-2018 AM460_RS19315 1a80e822748dfe7c395b91773e376199 203 Pfam PF01464 Transglycosylase SLT domain 43 168 2.8E-29 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS19315 1a80e822748dfe7c395b91773e376199 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 68.628 T 29-03-2018 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 AM460_RS19315 1a80e822748dfe7c395b91773e376199 203 SUPERFAMILY SSF53955 37 195 1.18E-26 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 SMART SM00869 135 386 1.7E-45 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 Gene3D G3DSA:2.40.128.130 91 397 8.6E-50 T 29-03-2018 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 Pfam PF03797 Autotransporter beta-domain 138 375 5.2E-50 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 PRINTS PR01484 Pertactin virulence factor family signature 176 200 2.6E-11 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 PRINTS PR01484 Pertactin virulence factor family signature 377 397 2.6E-11 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 PRINTS PR01484 Pertactin virulence factor family signature 135 155 2.6E-11 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 PRINTS PR01484 Pertactin virulence factor family signature 268 285 2.6E-11 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 PRINTS PR01484 Pertactin virulence factor family signature 314 335 2.6E-11 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 PRINTS PR01484 Pertactin virulence factor family signature 352 377 2.6E-11 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 9 397 2.1E-70 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS24810 ca0fcd89f9c84c3ddce54d100aec48d2 397 SUPERFAMILY SSF103515 104 397 3.4E-53 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS21340 82848d71501fe9bdaa07e90412ba43d3 396 Pfam PF17482 Phage tail sheath C-terminal domain 280 382 1.2E-17 T 29-03-2018 IPR020287 Tail sheath protein, C-terminal domain AM460_RS21340 82848d71501fe9bdaa07e90412ba43d3 396 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 113 279 1.5E-34 T 29-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM460_RS07745 135508bea4e52908ac79bdb356013219 267 Pfam PF03609 PTS system sorbose-specific iic component 7 238 2.3E-65 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM460_RS07745 135508bea4e52908ac79bdb356013219 267 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 2 267 5.0E-124 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM460_RS22640 345a0c1071f1a3c41e26f4f894ac344d 436 Pfam PF06519 TolA C-terminal 341 434 4.3E-38 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM460_RS22640 345a0c1071f1a3c41e26f4f894ac344d 436 TIGRFAM TIGR02794 tolA_full: protein TolA 12 248 1.1E-47 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM460_RS22640 345a0c1071f1a3c41e26f4f894ac344d 436 TIGRFAM TIGR02794 tolA_full: protein TolA 231 436 1.2E-46 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM460_RS22640 345a0c1071f1a3c41e26f4f894ac344d 436 SUPERFAMILY SSF74653 349 436 8.83E-23 T 29-03-2018 AM460_RS22640 345a0c1071f1a3c41e26f4f894ac344d 436 Gene3D G3DSA:3.30.1150.10 359 431 9.3E-20 T 29-03-2018 AM460_RS07670 25328f5c4962e959416bb11a10d3c34b 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM460_RS07670 25328f5c4962e959416bb11a10d3c34b 331 SUPERFAMILY SSF51391 11 162 1.44E-5 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS07670 25328f5c4962e959416bb11a10d3c34b 331 Pfam PF01136 Peptidase family U32 76 330 5.1E-66 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM460_RS07670 25328f5c4962e959416bb11a10d3c34b 331 Gene3D G3DSA:3.20.20.150 9 329 2.5E-18 T 29-03-2018 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 5.1E-46 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:2.40.110.10 115 215 3.1E-24 T 29-03-2018 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Hamap MF_01052 Crotonobetainyl-CoA dehydrogenase [caiA]. 1 380 91.978 T 29-03-2018 IPR023450 Crotonobetainyl-CoA reductase CaiA GO:0009437|GO:0016627|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 1.2E-14 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.20.140.10 216 380 5.1E-47 T 29-03-2018 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF56645 1 227 3.27E-52 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 PIRSF PIRSF016578 6 84 9.0E-6 T 29-03-2018 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 PIRSF PIRSF016578 241 378 6.9E-9 T 29-03-2018 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 1.9E-21 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.10.540.10 1 114 2.7E-19 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM460_RS26215 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF47203 226 379 1.93E-45 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS10740 a2d189749af6d11797f208916dc8dacd 119 PIRSF PIRSF011474 1 119 1.5E-47 T 29-03-2018 IPR009693 Glucitol operon activator AM460_RS10740 a2d189749af6d11797f208916dc8dacd 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 1.0E-35 T 29-03-2018 IPR009693 Glucitol operon activator AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:3.30.565.10 781 946 9.0E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SUPERFAMILY SSF55874 767 939 1.57E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:3.30.450.20 554 710 2.8E-4 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:3.40.190.10 46 215 8.0E-13 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SUPERFAMILY SSF53850 62 278 1.47E-23 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SMART SM00062 57 279 5.1E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SMART SM00062 303 522 2.7E-44 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SMART SM00388 711 777 6.8E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Pfam PF00512 His Kinase A (phospho-acceptor) domain 711 777 1.2E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Pfam PF00072 Response regulator receiver domain 961 1070 1.3E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:1.20.120.160 1096 1193 1.4E-12 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:3.40.50.2300 956 1095 1.7E-37 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:3.40.190.10 416 525 7.7E-9 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 825 937 9.2E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SUPERFAMILY SSF47384 694 778 2.16E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SMART SM00387 824 938 5.6E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:1.10.287.130 711 773 2.6E-13 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SMART SM00073 1094 1193 5.5E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SUPERFAMILY SSF53850 304 521 8.89E-31 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Gene3D G3DSA:3.40.190.10 287 415 9.9E-12 T 29-03-2018 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SUPERFAMILY SSF47226 1053 1182 4.32E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SUPERFAMILY SSF52172 957 1086 4.41E-36 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 SMART SM00448 959 1070 2.1E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 879 6.1E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 898 916 6.1E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 922 935 6.1E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 883 893 6.1E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 306 520 1.0E-23 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS12485 6467d71957dc14378fde77931cbf28dd 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 73 276 2.2E-13 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS05370 d18a02d2cad90f184364f58e90164b84 306 SUPERFAMILY SSF51658 41 243 1.16E-8 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS05370 d18a02d2cad90f184364f58e90164b84 306 Gene3D G3DSA:3.20.20.150 18 297 2.6E-4 T 29-03-2018 AM460_RS05370 d18a02d2cad90f184364f58e90164b84 306 Pfam PF16154 Domain of unknown function (DUF4862) 9 294 1.1E-90 T 29-03-2018 IPR032344 Protein of unknown function DUF4862 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 SMART SM01274 81 261 5.2E-108 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 SUPERFAMILY SSF53223 7 270 2.88E-110 T 29-03-2018 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 SUPERFAMILY SSF51735 271 562 5.03E-94 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 5.9E-104 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 SMART SM00919 271 531 3.0E-130 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 4.7E-80 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PIRSF PIRSF000106 1 563 1.2E-226 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 Gene3D G3DSA:3.40.50.10380 15 268 1.6E-113 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 267 283 3.1E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 87 111 3.1E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 298 314 3.1E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 183 205 3.1E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 147 176 3.1E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 408 424 3.1E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 242 260 3.1E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 72.724 T 29-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM460_RS17500 03df312d10c6d3d3b40c9b5d3442532a 565 Gene3D G3DSA:3.40.50.720 269 565 1.1E-104 T 29-03-2018 AM460_RS09600 967304230fc9960c61881a330f3e6323 76 Pfam PF03466 LysR substrate binding domain 15 72 8.2E-8 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS09600 967304230fc9960c61881a330f3e6323 76 SUPERFAMILY SSF53850 14 74 9.05E-10 T 29-03-2018 AM460_RS09600 967304230fc9960c61881a330f3e6323 76 Gene3D G3DSA:3.40.190.10 2 43 1.7E-5 T 29-03-2018 AM460_RS03770 3480cd573d47a9957acf9fa3fe3f7b3c 210 SUPERFAMILY SSF52540 17 198 3.42E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03770 3480cd573d47a9957acf9fa3fe3f7b3c 210 Gene3D G3DSA:3.40.50.300 5 208 1.7E-28 T 29-03-2018 AM460_RS03770 3480cd573d47a9957acf9fa3fe3f7b3c 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.826 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM460_RS03770 3480cd573d47a9957acf9fa3fe3f7b3c 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 7.1E-76 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM460_RS03770 3480cd573d47a9957acf9fa3fe3f7b3c 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 5.5E-20 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 2.6E-144 T 29-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 Gene3D G3DSA:3.30.70.20 44 113 8.7E-21 T 29-03-2018 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 PIRSF PIRSF036298 1 300 1.8E-165 T 29-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 Gene3D G3DSA:3.30.70.20 153 258 1.0E-22 T 29-03-2018 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.3E-24 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 Gene3D G3DSA:1.20.5.480 259 291 5.9E-22 T 29-03-2018 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 2.8E-21 T 29-03-2018 IPR015246 Formate dehydrogenase, transmembrane AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 SUPERFAMILY SSF54862 28 271 3.35E-72 T 29-03-2018 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 Gene3D G3DSA:3.30.70.20 13 43 0.0048 T 29-03-2018 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 Gene3D G3DSA:3.30.70.20 114 152 2.5E-16 T 29-03-2018 AM460_RS03605 a93f27ad2f8c0f17535d12324f08153e 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.10.275.10 3 141 7.0E-53 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 2.0E-276 T 29-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 4.8E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 4.8E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 4.8E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 4.8E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 Pfam PF00206 Lyase 13 345 3.2E-115 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.20.200.10 142 418 1.8E-73 T 29-03-2018 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.4E-5 T 29-03-2018 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 1.4E-5 T 29-03-2018 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.4E-5 T 29-03-2018 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.10.40.30 419 468 6.1E-18 T 29-03-2018 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 SUPERFAMILY SSF48557 2 458 4.71E-147 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM460_RS02065 450d855a66b57220e455c3824dd9226b 478 Pfam PF10415 Fumarase C C-terminus 411 464 3.8E-17 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS08870 17933f109879d84d2744f1c21ff87e24 77 SUPERFAMILY SSF54786 12 77 1.77E-24 T 29-03-2018 AM460_RS08870 17933f109879d84d2744f1c21ff87e24 77 Gene3D G3DSA:3.30.160.130 7 76 1.3E-29 T 29-03-2018 AM460_RS08870 17933f109879d84d2744f1c21ff87e24 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 8 74 4.4E-17 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS08870 17933f109879d84d2744f1c21ff87e24 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 8 76 1.0E-34 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 SUPERFAMILY SSF46785 3 60 8.92E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 Pfam PF08279 HTH domain 9 58 9.5E-13 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 SUPERFAMILY SSF55681 69 268 6.09E-59 T 29-03-2018 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 1.2E-11 T 29-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 Gene3D G3DSA:1.10.10.10 1 64 2.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 Gene3D G3DSA:2.30.30.100 272 318 5.2E-14 T 29-03-2018 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 SUPERFAMILY SSF50037 271 317 7.32E-11 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 76 8.3E-31 T 29-03-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 Gene3D G3DSA:3.30.930.10 65 270 3.4E-61 T 29-03-2018 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.123 T 29-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 4.2E-87 T 29-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AM460_RS03190 65636f6aeaca4b7835af4d6de64c92b9 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.5E-26 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM460_RS16845 548d0dd19d8c407af20e306faecff3de 285 SUPERFAMILY SSF111369 43 218 8.76E-26 T 29-03-2018 AM460_RS16845 548d0dd19d8c407af20e306faecff3de 285 Pfam PF00529 HlyD membrane-fusion protein of T1SS 17 276 4.7E-9 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS16845 548d0dd19d8c407af20e306faecff3de 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 230 8.1E-40 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS16845 548d0dd19d8c407af20e306faecff3de 285 Gene3D G3DSA:2.40.50.100 43 100 1.1E-18 T 29-03-2018 AM460_RS16845 548d0dd19d8c407af20e306faecff3de 285 Gene3D G3DSA:2.40.50.100 153 221 0.0012 T 29-03-2018 AM460_RS16845 548d0dd19d8c407af20e306faecff3de 285 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 230 7.0E-18 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS16845 548d0dd19d8c407af20e306faecff3de 285 Gene3D G3DSA:1.10.287.470 101 152 1.7E-8 T 29-03-2018 AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 Pfam PF03734 L,D-transpeptidase catalytic domain 377 543 6.9E-31 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 Pfam PF01471 Putative peptidoglycan binding domain 312 348 3.0E-7 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 Gene3D G3DSA:1.10.101.10 235 353 1.9E-21 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 Gene3D G3DSA:2.40.440.10 374 560 3.4E-24 T 29-03-2018 AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 SUPERFAMILY SSF47090 234 269 8.63E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 SUPERFAMILY SSF47090 314 356 8.63E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 SUPERFAMILY SSF141523 375 428 1.19E-20 T 29-03-2018 AM460_RS20895 f284f9c2357051949c0c3c2d2885b42a 615 SUPERFAMILY SSF141523 484 533 1.19E-20 T 29-03-2018 AM460_RS18395 6f5069a240f1425b067db276b36cc720 89 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 31 86 4.9E-25 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 7.9E-90 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.643 T 29-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.1E-30 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.1E-30 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 3.1E-30 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.1E-30 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Gene3D G3DSA:3.40.50.620 1 190 1.8E-74 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 6.7E-118 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 SUPERFAMILY SSF52374 5 330 2.85E-98 T 29-03-2018 AM460_RS06505 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Gene3D G3DSA:1.10.240.10 191 313 2.4E-32 T 29-03-2018 AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 Pfam PF00107 Zinc-binding dehydrogenase 173 300 1.5E-25 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 133 2.9E-33 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 SUPERFAMILY SSF50129 3 172 5.17E-52 T 29-03-2018 IPR011032 GroES-like AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 SMART SM00829 10 310 5.2E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 Gene3D G3DSA:3.90.180.10 1 146 2.8E-47 T 29-03-2018 AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 Gene3D G3DSA:3.40.50.720 147 326 4.1E-31 T 29-03-2018 AM460_RS00615 fb3c18fd96e7f6acfa823ea6be0318f0 340 SUPERFAMILY SSF51735 139 304 7.31E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18675 98b9f0f965258dab591a1222c87febbe 70 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS18675 98b9f0f965258dab591a1222c87febbe 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 1.3E-14 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS18675 98b9f0f965258dab591a1222c87febbe 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 1.3E-14 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS18675 98b9f0f965258dab591a1222c87febbe 70 Pfam PF01848 Hok/gef family 25 66 1.0E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS18675 98b9f0f965258dab591a1222c87febbe 70 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 31 67 1.0E-5 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS16755 8ba5cb3b605234ea37c4b507dd8e3c53 310 SUPERFAMILY SSF53850 88 290 2.71E-27 T 29-03-2018 AM460_RS16755 8ba5cb3b605234ea37c4b507dd8e3c53 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 7.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS16755 8ba5cb3b605234ea37c4b507dd8e3c53 310 Gene3D G3DSA:3.40.190.10 89 177 7.3E-7 T 29-03-2018 AM460_RS16755 8ba5cb3b605234ea37c4b507dd8e3c53 310 Gene3D G3DSA:3.40.190.10 178 265 2.8E-7 T 29-03-2018 AM460_RS16755 8ba5cb3b605234ea37c4b507dd8e3c53 310 Gene3D G3DSA:1.10.10.10 4 84 7.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS16755 8ba5cb3b605234ea37c4b507dd8e3c53 310 SUPERFAMILY SSF46785 6 88 2.18E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS16755 8ba5cb3b605234ea37c4b507dd8e3c53 310 Pfam PF03466 LysR substrate binding domain 88 290 2.4E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 SUPERFAMILY SSF52540 232 386 7.49E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 PIRSF PIRSF004776 2 410 4.9E-214 T 29-03-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 Gene3D G3DSA:1.10.260.40 4 61 3.7E-10 T 29-03-2018 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 5.3E-20 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 Pfam PF01381 Helix-turn-helix 7 59 3.7E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.4E-166 T 29-03-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 SUPERFAMILY SSF52374 66 229 1.66E-18 T 29-03-2018 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 SUPERFAMILY SSF47413 6 59 4.15E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 Pfam PF13521 AAA domain 234 394 4.9E-31 T 29-03-2018 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 SMART SM00530 6 62 6.9E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 Gene3D G3DSA:3.40.50.300 231 399 3.6E-15 T 29-03-2018 AM460_RS00170 73779966da8cdcea287876e7b73c7d90 410 Gene3D G3DSA:3.40.50.620 63 230 1.3E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 Gene3D G3DSA:3.40.5.10 1 49 4.8E-23 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.632 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-59 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 Gene3D G3DSA:3.10.430.100 63 148 7.6E-26 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 SUPERFAMILY SSF55653 60 149 1.07E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 SUPERFAMILY SSF55658 1 57 3.31E-19 T 29-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 3.1E-22 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01725 32db77dafcb2b4bb72dcbe9329a202fe 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.1E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 SMART SM00347 46 148 3.0E-31 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 SUPERFAMILY SSF46785 22 165 3.39E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 Gene3D G3DSA:1.10.10.10 23 169 1.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.4E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.4E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.4E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.4E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS10865 cb46ebd2de6f4964c3221d528f8b12dd 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:2.40.30.10 295 406 5.3E-30 T 29-03-2018 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.40.50.300 1 293 6.5E-57 T 29-03-2018 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Pfam PF00679 Elongation factor G C-terminus 611 696 8.3E-29 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.70.240 625 702 1.6E-29 T 29-03-2018 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 SMART SM00838 611 698 3.9E-50 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54211 486 610 9.1E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 29-03-2018 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54980 611 700 2.84E-27 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 112.581 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 7.0E-32 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Pfam PF03764 Elongation factor G, domain IV 486 609 1.8E-45 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF52540 6 288 1.2E-106 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.230.10 501 624 1.3E-40 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-67 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF50447 271 411 3.76E-35 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.2E-16 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 SMART SM00889 487 609 1.4E-72 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM460_RS06715 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.70.870 407 500 1.8E-37 T 29-03-2018 AM460_RS27300 db79265f2fa0623917673e3a9af076c6 243 SUPERFAMILY SSF52540 4 225 8.33E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27300 db79265f2fa0623917673e3a9af076c6 243 SMART SM00382 32 217 6.6E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS27300 db79265f2fa0623917673e3a9af076c6 243 Gene3D G3DSA:3.40.50.300 2 237 3.6E-33 T 29-03-2018 AM460_RS27300 db79265f2fa0623917673e3a9af076c6 243 Pfam PF00005 ABC transporter 24 162 1.2E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS26120 3c717ad396a7379cb5b870f1b449d8da 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS26120 3c717ad396a7379cb5b870f1b449d8da 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 5.6E-30 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS26120 3c717ad396a7379cb5b870f1b449d8da 219 Gene3D G3DSA:3.30.2350.10 14 218 1.5E-61 T 29-03-2018 AM460_RS26120 3c717ad396a7379cb5b870f1b449d8da 219 SUPERFAMILY SSF55120 8 216 1.92E-63 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS26120 3c717ad396a7379cb5b870f1b449d8da 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 218 1.0E-60 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 6.5E-81 T 29-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 1.6E-29 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 81 118 2.0E-21 T 29-03-2018 AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0028 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 119 202 6.5E-19 T 29-03-2018 AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 3 80 9.6E-19 T 29-03-2018 AM460_RS21545 f64233bd1c609e5d66549657a48d9fe4 205 SUPERFAMILY SSF54862 3 199 2.83E-71 T 29-03-2018 AM460_RS13455 a07bb34441c6673adc6487777de77067 604 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 504 3.8E-70 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS13455 a07bb34441c6673adc6487777de77067 604 PIRSF PIRSF002741 3 592 7.8E-183 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS13455 a07bb34441c6673adc6487777de77067 604 Gene3D G3DSA:3.40.190.10 203 314 4.7E-19 T 29-03-2018 AM460_RS13455 a07bb34441c6673adc6487777de77067 604 Gene3D G3DSA:3.10.105.10 315 560 2.2E-45 T 29-03-2018 AM460_RS13455 a07bb34441c6673adc6487777de77067 604 Gene3D G3DSA:3.90.76.10 63 202 1.7E-24 T 29-03-2018 AM460_RS13455 a07bb34441c6673adc6487777de77067 604 SUPERFAMILY SSF53850 49 590 4.89E-109 T 29-03-2018 AM460_RS08600 488b64d8d7d1d62b8dc4c69da2641139 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.8E-31 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS08600 488b64d8d7d1d62b8dc4c69da2641139 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 29-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AM460_RS08600 488b64d8d7d1d62b8dc4c69da2641139 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.164 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS08600 488b64d8d7d1d62b8dc4c69da2641139 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 1.6E-44 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS08600 488b64d8d7d1d62b8dc4c69da2641139 113 PIRSF PIRSF004761 1 113 1.5E-36 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 PIRSF PIRSF005261 1 285 2.1E-72 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:3.90.1280.10 226 281 3.8E-25 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:3.55.30.10 1 176 1.6E-62 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 34.043 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 SUPERFAMILY SSF118352 225 283 3.27E-20 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:1.10.287.480 181 225 3.1E-20 T 29-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 Pfam PF01430 Hsp33 protein 5 272 4.6E-86 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM460_RS06420 318d18d3118b6b44e1aed873603a898a 292 SUPERFAMILY SSF64397 4 232 7.19E-77 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM460_RS00885 cd86c5f4369e1c2abb173c1c184361ea 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 4.8E-11 T 29-03-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain AM460_RS00885 cd86c5f4369e1c2abb173c1c184361ea 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 1.7E-8 T 29-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger AM460_RS00885 cd86c5f4369e1c2abb173c1c184361ea 406 Pfam PF01610 Transposase 159 393 6.2E-58 T 29-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AM460_RS15255 cd86c5f4369e1c2abb173c1c184361ea 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 4.8E-11 T 29-03-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain AM460_RS15255 cd86c5f4369e1c2abb173c1c184361ea 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 1.7E-8 T 29-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger AM460_RS15255 cd86c5f4369e1c2abb173c1c184361ea 406 Pfam PF01610 Transposase 159 393 6.2E-58 T 29-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AM460_RS03585 c99729294c53f70764f4363b288c6736 277 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 13 276 33.739 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM460_RS03585 c99729294c53f70764f4363b288c6736 277 PIRSF PIRSF015626 4 277 1.6E-82 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM460_RS03585 c99729294c53f70764f4363b288c6736 277 Gene3D G3DSA:3.40.140.10 142 277 1.7E-43 T 29-03-2018 AM460_RS03585 c99729294c53f70764f4363b288c6736 277 Gene3D G3DSA:3.10.20.10 40 126 2.5E-22 T 29-03-2018 AM460_RS03585 c99729294c53f70764f4363b288c6736 277 SUPERFAMILY SSF53927 22 275 9.63E-82 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM460_RS03585 c99729294c53f70764f4363b288c6736 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 277 1.8E-102 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM460_RS03585 c99729294c53f70764f4363b288c6736 277 Pfam PF02634 FdhD/NarQ family 38 275 2.3E-72 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 686 767 3.8E-17 T 29-03-2018 IPR009647 Penicillin-binding, C-terminal AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 770 5.5E-275 T 29-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 Pfam PF00905 Penicillin binding protein transpeptidase domain 330 519 1.0E-10 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 SUPERFAMILY SSF56601 208 638 7.98E-92 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 Gene3D G3DSA:3.40.710.10 259 603 2.9E-63 T 29-03-2018 AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 Gene3D G3DSA:1.10.3810.10 42 243 5.3E-59 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 SUPERFAMILY SSF53955 39 258 1.69E-65 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS11800 b4f1847400284b609d6b0832d6850fda 770 Pfam PF00912 Transglycosylase 62 226 7.3E-51 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 Gene3D G3DSA:3.30.70.20 47 73 2.3E-9 T 29-03-2018 AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 SUPERFAMILY SSF54862 33 158 1.23E-17 T 29-03-2018 AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 Gene3D G3DSA:3.30.70.20 102 160 1.4E-9 T 29-03-2018 AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 Pfam PF13187 4Fe-4S dicluster domain 37 82 2.2E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 Gene3D G3DSA:3.30.70.20 7 46 0.013 T 29-03-2018 AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 Pfam PF00037 4Fe-4S binding domain 136 157 5.0E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 Gene3D G3DSA:3.30.70.20 74 101 0.024 T 29-03-2018 AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 7 157 7.8E-74 T 29-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 AM460_RS13295 e40299c4a2e4acb11263d8475ecf0dde 164 Pfam PF12800 4Fe-4S binding domain 101 118 0.57 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13815 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 29-03-2018 IPR000808 Mrp, conserved site GO:0005524 AM460_RS13815 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 SUPERFAMILY SSF117916 15 85 1.05E-5 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AM460_RS13815 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Gene3D G3DSA:3.40.50.300 106 358 1.2E-61 T 29-03-2018 AM460_RS13815 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 2.5E-101 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AM460_RS13815 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 SUPERFAMILY SSF52540 108 355 1.89E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13815 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.76 T 29-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 1 75 1.5E-31 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS01730 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 29-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS17445 36a9a4610ce76e5efc5008059008fecd 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 448 4.3E-209 T 29-03-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 AM460_RS17445 36a9a4610ce76e5efc5008059008fecd 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 29-03-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 AM460_RS17445 36a9a4610ce76e5efc5008059008fecd 466 Gene3D G3DSA:3.40.640.10 68 329 8.6E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS17445 36a9a4610ce76e5efc5008059008fecd 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 1.5E-114 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM460_RS17445 36a9a4610ce76e5efc5008059008fecd 466 SUPERFAMILY SSF53383 6 451 1.09E-132 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS17445 36a9a4610ce76e5efc5008059008fecd 466 Gene3D G3DSA:3.90.1150.10 330 449 3.3E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 SUPERFAMILY SSF117125 667 772 3.4E-35 T 29-03-2018 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 Gene3D G3DSA:2.60.40.1760 1 238 4.6E-56 T 29-03-2018 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 Gene3D G3DSA:2.60.40.1180 606 665 3.2E-20 T 29-03-2018 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 Pfam PF13802 Galactose mutarotase-like 159 218 3.5E-15 T 29-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 SUPERFAMILY SSF51011 586 665 6.4E-21 T 29-03-2018 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 SUPERFAMILY SSF51445 263 603 5.47E-90 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 Pfam PF01055 Glycosyl hydrolases family 31 240 666 5.7E-120 T 29-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 Gene3D G3DSA:2.60.40.1180 666 771 6.3E-34 T 29-03-2018 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 SUPERFAMILY SSF74650 1 247 2.32E-67 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS04930 a11d795aa04e5349d4fcdcf5b73fc60a 772 Gene3D G3DSA:3.20.20.80 239 605 1.1E-109 T 29-03-2018 AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 SUPERFAMILY SSF52540 241 485 2.42E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 Gene3D G3DSA:3.40.50.300 2 234 9.1E-51 T 29-03-2018 AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 Pfam PF00005 ABC transporter 278 433 2.6E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 Pfam PF00005 ABC transporter 21 171 5.8E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 Gene3D G3DSA:3.40.50.300 256 512 2.4E-40 T 29-03-2018 AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 1.6E-291 T 29-03-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 SMART SM00382 286 482 1.2E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 SMART SM00382 29 219 2.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS05420 d4c8f39706a8a124c86e6a13503cd856 513 SUPERFAMILY SSF52540 3 228 4.05E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 355 550 5.0E-22 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 1.6E-12 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 Gene3D G3DSA:3.90.780.10 374 607 4.3E-43 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 PRINTS PR01607 Apyrase family signature 530 549 6.3E-32 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 PRINTS PR01607 Apyrase family signature 215 232 6.3E-32 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 PRINTS PR01607 Apyrase family signature 428 451 6.3E-32 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 PRINTS PR01607 Apyrase family signature 22 40 6.3E-32 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 PRINTS PR01607 Apyrase family signature 243 266 6.3E-32 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 PRINTS PR01607 Apyrase family signature 283 303 6.3E-32 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 SUPERFAMILY SSF55816 355 597 3.66E-39 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 SUPERFAMILY SSF56300 19 353 1.45E-86 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 29-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AM460_RS01625 5a643710b964b6e7080ae937ed4b5104 647 Gene3D G3DSA:3.60.21.10 12 373 3.7E-82 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS13010 fee40d4ca185e3eaf50add88f5e77e13 285 Gene3D G3DSA:3.90.226.10 1 222 1.1E-63 T 29-03-2018 AM460_RS13010 fee40d4ca185e3eaf50add88f5e77e13 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 8.7E-79 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM460_RS13010 fee40d4ca185e3eaf50add88f5e77e13 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.624 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM460_RS13010 fee40d4ca185e3eaf50add88f5e77e13 285 SUPERFAMILY SSF52096 16 280 7.54E-79 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS13010 fee40d4ca185e3eaf50add88f5e77e13 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM460_RS13010 fee40d4ca185e3eaf50add88f5e77e13 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 7.6E-152 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM460_RS13010 fee40d4ca185e3eaf50add88f5e77e13 285 Gene3D G3DSA:1.10.12.10 225 273 3.4E-13 T 29-03-2018 IPR014748 Crontonase, C-terminal AM460_RS21565 f298c4967bead504aaaf0db7d52d8719 173 Pfam PF10743 Regulatory phage protein cox 58 128 8.5E-8 T 29-03-2018 IPR019679 Bacteriophage P2, regulatory protein Cox AM460_RS07450 9e16eff5a04c7b0ce378fdc814bd2127 185 Pfam PF03968 OstA-like protein 37 149 1.7E-32 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM460_RS07450 9e16eff5a04c7b0ce378fdc814bd2127 185 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 27.239 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM460_RS07450 9e16eff5a04c7b0ce378fdc814bd2127 185 Gene3D G3DSA:2.60.450.10 27 164 8.2E-28 T 29-03-2018 AM460_RS07450 9e16eff5a04c7b0ce378fdc814bd2127 185 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 166 9.6E-52 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM460_RS03055 75a97a44779f397807bdf45e86477b78 223 Pfam PF04493 Endonuclease V 12 206 5.2E-73 T 29-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM460_RS03055 75a97a44779f397807bdf45e86477b78 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 35.642 T 29-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:1.10.730.10 648 796 8.7E-32 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:3.40.50.620 404 647 1.3E-57 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 821 7.2E-17 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 2.4E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 651 9.7E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.4E-25 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF50677 226 415 1.15E-57 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:3.90.740.10 225 403 4.3E-54 T 29-03-2018 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 5.5E-79 T 29-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:3.40.50.620 32 173 7.2E-49 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.303 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF52374 416 668 3.42E-140 T 29-03-2018 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF52374 5 226 3.42E-140 T 29-03-2018 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF47323 662 859 5.05E-38 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.1E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.1E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS23165 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.1E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 7.9E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 7.9E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 7.9E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 7.9E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 50.864 T 29-03-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 SUPERFAMILY SSF53474 9 253 6.43E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 257 2.8E-123 T 29-03-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 Gene3D G3DSA:3.40.50.1820 1 266 3.8E-57 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS20515 b087f05ca37b679908adefd433cf86ae 266 Pfam PF00561 alpha/beta hydrolase fold 14 115 7.7E-17 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.230.10 76 166 2.4E-34 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.8E-30 T 29-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 29-03-2018 AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 29-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.99 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.7E-29 T 29-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54211 79 159 3.54E-27 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.4E-71 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM460_RS06905 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.160.20 10 72 4.2E-28 T 29-03-2018 AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Gene3D G3DSA:3.90.1150.10 260 360 9.0E-37 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Gene3D G3DSA:3.40.640.10 16 259 1.6E-25 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 PIRSF PIRSF000525 1 362 1.1E-150 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 2.4E-155 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 51.689 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 SUPERFAMILY SSF53383 4 362 1.54E-116 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS21265 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Pfam PF00266 Aminotransferase class-V 4 350 3.1E-76 T 29-03-2018 IPR000192 Aminotransferase class V domain AM460_RS07405 749fd59099bdd67700b73729a1a469cf 217 Gene3D G3DSA:3.40.50.880 2 217 5.2E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS07405 749fd59099bdd67700b73729a1a469cf 217 PIRSF PIRSF006320 1 216 1.8E-106 T 29-03-2018 IPR026041 Glyoxalase ElbB AM460_RS07405 749fd59099bdd67700b73729a1a469cf 217 SUPERFAMILY SSF52317 1 216 3.57E-66 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 SMART SM00345 7 66 1.2E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 Gene3D G3DSA:3.40.640.10 123 370 2.2E-49 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 Gene3D G3DSA:1.10.10.10 1 70 2.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 Gene3D G3DSA:3.90.1150.10 371 469 3.0E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 Pfam PF00155 Aminotransferase class I and II 122 461 4.5E-36 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 SUPERFAMILY SSF53383 80 465 6.33E-92 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 9.0E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00705 1e4c216f23dc619b952fef02fc7af762 470 SUPERFAMILY SSF46785 1 70 5.17E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00870 0b8803bf4d8ff74f044a00dd494799f8 198 Gene3D G3DSA:1.10.443.10 2 177 4.9E-35 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS00870 0b8803bf4d8ff74f044a00dd494799f8 198 Pfam PF00589 Phage integrase family 6 176 3.9E-50 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS00870 0b8803bf4d8ff74f044a00dd494799f8 198 SUPERFAMILY SSF56349 4 184 6.18E-43 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 Gene3D G3DSA:3.30.420.40 145 288 1.1E-18 T 29-03-2018 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.3E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.3E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.3E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.3E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.3E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.3E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 29-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 Pfam PF00814 Glycoprotease family 24 307 3.1E-103 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.1E-136 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.78 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 2.1E-130 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 SUPERFAMILY SSF53067 1 309 6.61E-45 T 29-03-2018 AM460_RS08155 e05a479c3938d5a71cd885fb481e3ec4 337 Gene3D G3DSA:3.30.420.40 1 144 6.3E-43 T 29-03-2018 AM460_RS13785 75d260eebd6ee4e0da00d74cf55395b4 362 SUPERFAMILY SSF52540 58 304 1.05E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13785 75d260eebd6ee4e0da00d74cf55395b4 362 Gene3D G3DSA:3.40.50.300 62 227 1.3E-19 T 29-03-2018 AM460_RS13785 75d260eebd6ee4e0da00d74cf55395b4 362 Pfam PF07728 AAA domain (dynein-related subfamily) 79 220 2.1E-32 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM460_RS13785 75d260eebd6ee4e0da00d74cf55395b4 362 SMART SM00382 75 230 0.0012 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS09865 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 SMART SM00257 41 85 2.7E-16 T 29-03-2018 IPR018392 LysM domain AM460_RS09865 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Pfam PF01551 Peptidase family M23 145 238 2.1E-31 T 29-03-2018 IPR016047 Peptidase M23 AM460_RS09865 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Gene3D G3DSA:2.70.70.10 112 250 2.1E-36 T 29-03-2018 AM460_RS09865 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 SUPERFAMILY SSF51261 41 242 7.32E-48 T 29-03-2018 IPR011055 Duplicated hybrid motif AM460_RS09865 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Gene3D G3DSA:3.10.350.10 28 107 1.1E-17 T 29-03-2018 AM460_RS09865 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Pfam PF01476 LysM domain 42 84 2.6E-15 T 29-03-2018 IPR018392 LysM domain AM460_RS04185 f85141e0caa00c3812d122f43cf21988 551 Pfam PF00884 Sulfatase 86 418 2.5E-87 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS04185 f85141e0caa00c3812d122f43cf21988 551 Gene3D G3DSA:3.30.1120.10 457 542 5.7E-7 T 29-03-2018 AM460_RS04185 f85141e0caa00c3812d122f43cf21988 551 ProSitePatterns PS00149 Sulfatases signature 2. 180 190 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM460_RS04185 f85141e0caa00c3812d122f43cf21988 551 ProSitePatterns PS00523 Sulfatases signature 1. 134 146 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM460_RS04185 f85141e0caa00c3812d122f43cf21988 551 SUPERFAMILY SSF53649 83 542 1.45E-95 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS04185 f85141e0caa00c3812d122f43cf21988 551 Gene3D G3DSA:3.40.720.10 85 456 9.4E-72 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 Gene3D G3DSA:3.20.20.70 1 321 1.0E-138 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 29-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 SUPERFAMILY SSF51569 4 319 1.03E-129 T 29-03-2018 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 2.2E-136 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 1.2E-54 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 1.2E-54 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 1.2E-54 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 1.2E-54 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 1.2E-54 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 1.2E-54 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 SMART SM01004 3 321 1.2E-211 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS24525 28ea057f2be462c5d1aa36c12293c25a 324 PIRSF PIRSF001415 1 323 6.9E-150 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 SMART SM00342 178 261 3.8E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 SUPERFAMILY SSF46689 215 264 7.17E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 Pfam PF02311 AraC-like ligand binding domain 26 131 2.1E-8 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 Gene3D G3DSA:1.10.10.60 218 271 1.2E-15 T 29-03-2018 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 Gene3D G3DSA:1.10.10.60 147 217 2.2E-9 T 29-03-2018 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 3.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 3.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 Pfam PF12833 Helix-turn-helix domain 184 263 2.1E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 SUPERFAMILY SSF51215 7 146 1.06E-14 T 29-03-2018 AM460_RS05330 b12bef4c9ceee35a48b16e1bb6e97f1c 271 Gene3D G3DSA:2.60.120.280 21 146 3.9E-13 T 29-03-2018 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 PIRSF PIRSF000437 19 807 0.0 T 29-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 Gene3D G3DSA:3.40.1130.10 236 497 1.4E-34 T 29-03-2018 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 34.006 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 SMART SM00563 300 427 1.1E-27 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 PIRSF PIRSF500064 2 807 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 SUPERFAMILY SSF69593 245 482 3.66E-23 T 29-03-2018 AM460_RS02780 721e1b67843d6519f2df89b98b0b62c0 807 Pfam PF01553 Acyltransferase 282 424 4.5E-26 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS19890 b4d51101f4dda9aed469e72fafa4014d 368 Gene3D G3DSA:2.40.30.10 282 365 7.4E-29 T 29-03-2018 AM460_RS19890 b4d51101f4dda9aed469e72fafa4014d 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 40.978 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM460_RS19890 b4d51101f4dda9aed469e72fafa4014d 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 2.5E-161 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM460_RS19890 b4d51101f4dda9aed469e72fafa4014d 368 SUPERFAMILY SSF52402 5 295 8.16E-58 T 29-03-2018 AM460_RS19890 b4d51101f4dda9aed469e72fafa4014d 368 Gene3D G3DSA:3.40.50.620 1 212 4.2E-66 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS19890 b4d51101f4dda9aed469e72fafa4014d 368 Pfam PF03054 tRNA methyl transferase 6 360 6.5E-145 T 29-03-2018 AM460_RS19890 b4d51101f4dda9aed469e72fafa4014d 368 Gene3D G3DSA:2.30.30.280 213 280 7.4E-29 T 29-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 2.6E-94 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 Gene3D G3DSA:3.60.10.10 1 267 2.4E-51 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 7.8E-111 T 29-03-2018 AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 SUPERFAMILY SSF56219 1 267 7.33E-88 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.0E-20 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS16260 90d6dbeccf3f6710e30c406ad67ec75f 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AM460_RS05100 9887a80b27b8c61a144c439f1bacec15 265 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 20 230 4.2E-71 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AM460_RS05100 9887a80b27b8c61a144c439f1bacec15 265 PIRSF PIRSF037318 1 265 1.1E-162 T 29-03-2018 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 AM460_RS05100 9887a80b27b8c61a144c439f1bacec15 265 SUPERFAMILY SSF56112 58 232 2.72E-8 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS05100 9887a80b27b8c61a144c439f1bacec15 265 Gene3D G3DSA:1.10.510.10 15 250 2.5E-4 T 29-03-2018 AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:1.10.10.10 8 63 6.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:3.30.70.920 64 158 1.9E-27 T 29-03-2018 AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF54909 74 157 4.16E-22 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 SMART SM00344 12 121 3.5E-55 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.1E-24 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.8E-21 T 29-03-2018 AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS21840 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS22675 24e689b003b14408a49a151692cf629c 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.7E-173 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM460_RS22675 24e689b003b14408a49a151692cf629c 522 PIRSF PIRSF006446 1 328 1.1E-114 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM460_RS22675 24e689b003b14408a49a151692cf629c 522 PIRSF PIRSF006446 355 522 2.9E-29 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 SUPERFAMILY SSF48310 212 699 6.28E-78 T 29-03-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 SMART SM00790 5 206 1.4E-86 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 Gene3D G3DSA:1.10.569.10 270 465 3.3E-26 T 29-03-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 228 685 8.1E-70 T 29-03-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 205 1.2E-67 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 Gene3D G3DSA:3.60.9.10 2 210 6.9E-73 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 SUPERFAMILY SSF56228 3 210 5.89E-62 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM460_RS16675 9d5dca8fb4fb868175775e2c6635cc00 700 Gene3D G3DSA:1.10.599.10 466 688 1.8E-42 T 29-03-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 AM460_RS20880 420f580d8182da0a569eab494687ceb6 215 SUPERFAMILY SSF56281 2 209 5.15E-61 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS20880 420f580d8182da0a569eab494687ceb6 215 Gene3D G3DSA:3.60.15.10 1 213 1.4E-44 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS20880 420f580d8182da0a569eab494687ceb6 215 SMART SM00849 12 192 1.7E-43 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS20880 420f580d8182da0a569eab494687ceb6 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.1E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 SUPERFAMILY SSF48557 5 459 2.67E-160 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 1.3E-34 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.3E-34 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.3E-34 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.3E-34 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 92.304 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 Pfam PF10415 Fumarase C C-terminus 408 461 7.1E-26 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 Pfam PF00206 Lyase 12 342 2.2E-125 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 2.3E-255 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 Gene3D G3DSA:1.10.40.30 418 462 4.9E-26 T 29-03-2018 AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 Gene3D G3DSA:1.20.200.10 139 417 7.2E-89 T 29-03-2018 AM460_RS17025 c294b50c5e117dffd9d9c4f6e3393dc4 467 Gene3D G3DSA:1.10.275.10 2 138 5.1E-61 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 SMART SM00421 22 79 2.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 SUPERFAMILY SSF46894 17 74 8.5E-10 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 SMART SM00052 105 351 6.9E-113 T 29-03-2018 IPR001633 EAL domain AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 Gene3D G3DSA:3.20.20.450 113 360 3.7E-72 T 29-03-2018 IPR001633 EAL domain AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 Gene3D G3DSA:1.10.10.10 24 112 9.1E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 SUPERFAMILY SSF141868 112 354 1.96E-71 T 29-03-2018 IPR001633 EAL domain AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 Pfam PF00563 EAL domain 112 346 1.1E-60 T 29-03-2018 IPR001633 EAL domain AM460_RS24735 708ef893d10de5ff794037cacca7fb87 362 Pfam PF00196 Bacterial regulatory proteins, luxR family 25 73 2.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS12075 c19304397ac23e2aa387684ae488c741 111 PIRSF PIRSF012296 1 111 3.5E-57 T 29-03-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 AM460_RS12075 c19304397ac23e2aa387684ae488c741 111 SMART SM00877 39 111 7.2E-14 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12075 c19304397ac23e2aa387684ae488c741 111 SUPERFAMILY SSF143414 39 107 2.62E-13 T 29-03-2018 AM460_RS12075 c19304397ac23e2aa387684ae488c741 111 Pfam PF00936 BMC domain 40 105 2.0E-12 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS07820 fd2751ab9a9bb817a2ca1cbeb0459102 444 PIRSF PIRSF002808 3 444 8.7E-36 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS07820 fd2751ab9a9bb817a2ca1cbeb0459102 444 Gene3D G3DSA:1.20.1250.20 6 229 2.3E-35 T 29-03-2018 AM460_RS07820 fd2751ab9a9bb817a2ca1cbeb0459102 444 Pfam PF07690 Major Facilitator Superfamily 23 365 3.5E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS07820 fd2751ab9a9bb817a2ca1cbeb0459102 444 SUPERFAMILY SSF103473 9 443 5.89E-78 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS07820 fd2751ab9a9bb817a2ca1cbeb0459102 444 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 25 434 1.7E-137 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS07820 fd2751ab9a9bb817a2ca1cbeb0459102 444 Gene3D G3DSA:1.20.1250.20 239 444 2.6E-25 T 29-03-2018 AM460_RS06295 259243779a2affa651e4f3a2f2ab2c72 131 Gene3D G3DSA:1.10.8.60 2 44 1.1E-7 T 29-03-2018 AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 Gene3D G3DSA:3.40.190.10 83 216 2.3E-15 T 29-03-2018 AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 SUPERFAMILY SSF46785 1 87 2.55E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 Pfam PF03466 LysR substrate binding domain 87 289 2.0E-31 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 SUPERFAMILY SSF53850 88 295 1.81E-29 T 29-03-2018 AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.6E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14620 294d5d25b115f5a72c1c938619b37f22 305 Gene3D G3DSA:1.10.10.10 1 82 1.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02800 e6b883fe8501d76661fe5aaf22889637 306 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 209 1.8E-50 T 29-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AM460_RS06440 64067a994cc33e4e4d907677b9039ece 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS06440 64067a994cc33e4e4d907677b9039ece 186 Pfam PF00293 NUDIX domain 46 150 8.3E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS06440 64067a994cc33e4e4d907677b9039ece 186 Gene3D G3DSA:3.90.79.10 8 186 6.2E-33 T 29-03-2018 AM460_RS06440 64067a994cc33e4e4d907677b9039ece 186 SUPERFAMILY SSF55811 3 182 4.2E-38 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.10.10 222 284 8.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 7.4E-130 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.9E-35 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 Pfam PF04545 Sigma-70, region 4 228 280 6.6E-17 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 Pfam PF04542 Sigma-70 region 2 53 122 1.2E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.601.10 8 122 1.5E-32 T 29-03-2018 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88946 15 122 2.75E-38 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 PIRSF PIRSF000770 14 284 2.0E-33 T 29-03-2018 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 55.487 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM460_RS06095 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88659 200 283 4.11E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 882 1279 8.7E-56 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 612 626 3.9E-13 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 62 82 3.9E-13 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 249 267 3.9E-13 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 Gene3D G3DSA:2.160.20.20 663 976 1.1E-12 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 SUPERFAMILY SSF50494 193 288 7.2E-5 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 SUPERFAMILY SSF50494 106 165 7.2E-5 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 SMART SM00869 1017 1268 1.8E-27 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 Gene3D G3DSA:2.40.128.130 977 1279 4.9E-38 T 29-03-2018 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 Pfam PF03797 Autotransporter beta-domain 1021 1258 4.0E-33 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 SUPERFAMILY SSF51126 389 669 1.88E-45 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 SUPERFAMILY SSF51126 739 975 1.88E-45 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 Pfam PF02395 Immunoglobulin A1 protease 543 708 9.3E-10 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 Pfam PF02395 Immunoglobulin A1 protease 58 520 1.8E-115 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AM460_RS02160 0f00191fb2fd2b5725cbfe6563411abe 1279 SUPERFAMILY SSF103515 999 1279 4.71E-38 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS10220 6a44e8fcf17758224ba9f381a3d0d4bd 401 Gene3D G3DSA:3.40.640.10 31 278 3.0E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS10220 6a44e8fcf17758224ba9f381a3d0d4bd 401 Pfam PF00266 Aminotransferase class-V 21 388 3.6E-141 T 29-03-2018 IPR000192 Aminotransferase class V domain AM460_RS10220 6a44e8fcf17758224ba9f381a3d0d4bd 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM460_RS10220 6a44e8fcf17758224ba9f381a3d0d4bd 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 4.3E-233 T 29-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM460_RS10220 6a44e8fcf17758224ba9f381a3d0d4bd 401 SUPERFAMILY SSF53383 5 397 4.65E-110 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS10220 6a44e8fcf17758224ba9f381a3d0d4bd 401 Gene3D G3DSA:3.90.1150.10 279 395 2.6E-35 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 SMART SM00388 233 293 7.2E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 SUPERFAMILY SSF55874 292 444 3.67E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 SUPERFAMILY SSF47384 217 291 5.89E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 2.2E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 Gene3D G3DSA:3.30.565.10 294 450 5.7E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 SMART SM00304 180 232 6.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 Pfam PF00672 HAMP domain 182 225 2.9E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 3.7E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 Gene3D G3DSA:1.10.287.130 223 289 6.0E-13 T 29-03-2018 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 7.7E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 7.7E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 7.7E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS06390 dc09b8a346a180ee93edf2df13f00c5b 450 SMART SM00387 332 440 2.1E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03385 779729355b39f0a9064b8cd257dc0f03 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM460_RS03385 779729355b39f0a9064b8cd257dc0f03 105 Hamap MF_00744 Met repressor [metJ]. 1 105 42.783 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM460_RS03385 779729355b39f0a9064b8cd257dc0f03 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.8E-59 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM460_RS03385 779729355b39f0a9064b8cd257dc0f03 105 Gene3D G3DSA:1.10.140.10 3 103 2.3E-59 T 29-03-2018 IPR023453 Methionine repressor MetJ domain AM460_RS03385 779729355b39f0a9064b8cd257dc0f03 105 SUPERFAMILY SSF47598 2 105 2.45E-58 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM460_RS17185 20ad3c8641f24eb707e63cce2fcefd29 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 4.0E-53 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 AM460_RS17185 20ad3c8641f24eb707e63cce2fcefd29 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 5.1E-41 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 AM460_RS17185 20ad3c8641f24eb707e63cce2fcefd29 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 28.695 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 AM460_RS25575 4e005708ad0437e82dd368146bb9a5ef 188 SUPERFAMILY SSF49401 30 187 9.94E-24 T 29-03-2018 IPR008966 Adhesion domain AM460_RS25575 4e005708ad0437e82dd368146bb9a5ef 188 Pfam PF00419 Fimbrial protein 30 187 2.8E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25575 4e005708ad0437e82dd368146bb9a5ef 188 Gene3D G3DSA:2.60.40.1090 28 188 7.4E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 Gene3D G3DSA:3.30.230.10 217 330 1.7E-29 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 SMART SM01340 212 331 1.5E-54 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 Gene3D G3DSA:3.30.565.10 1 216 1.8E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.2E-12 T 29-03-2018 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 612 25.87 T 29-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 SUPERFAMILY SSF55874 1 201 3.8E-57 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 SMART SM00853 438 573 1.7E-17 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 SUPERFAMILY SSF118116 434 613 5.49E-43 T 29-03-2018 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 29-03-2018 IPR014762 DNA mismatch repair, conserved site AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 Pfam PF08676 MutL C terminal dimerisation domain 435 563 2.0E-24 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 SUPERFAMILY SSF54211 191 331 4.17E-35 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 1.7E-107 T 29-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AM460_RS01900 98937a668c2b8e0428839ba09c620235 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 2.5E-35 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 83 177 1.1E-35 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 PIRSF PIRSF002162 1 177 7.7E-44 T 29-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.3E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.3E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.3E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-73 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 1 82 9.55E-24 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 86 177 4.0E-39 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 5 85 5.4E-25 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 29-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.551 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 11 82 1.0E-18 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06895 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 90 164 7.1E-19 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS20655 28a06187c0be2571864b5d8d5a6ada57 132 Gene3D G3DSA:3.40.30.10 18 132 4.7E-7 T 29-03-2018 AM460_RS20655 28a06187c0be2571864b5d8d5a6ada57 132 SUPERFAMILY SSF52833 5 130 1.6E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS20655 28a06187c0be2571864b5d8d5a6ada57 132 Pfam PF07449 Hydrogenase-1 expression protein HyaE 10 116 5.6E-43 T 29-03-2018 IPR010893 [NiFe]-hydrogenase maturation factor HyaE AM460_RS20790 f939cdca0fd1d1ed4d214683c9e9a204 417 Pfam PF04403 Paraquat-inducible protein A 49 200 6.0E-40 T 29-03-2018 IPR007498 Paraquat-inducible protein A AM460_RS20790 f939cdca0fd1d1ed4d214683c9e9a204 417 Pfam PF04403 Paraquat-inducible protein A 253 408 9.6E-54 T 29-03-2018 IPR007498 Paraquat-inducible protein A AM460_RS20790 f939cdca0fd1d1ed4d214683c9e9a204 417 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 6.3E-200 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 Gene3D G3DSA:3.90.1150.10 340 459 5.3E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 Pfam PF00202 Aminotransferase class-III 74 449 2.7E-103 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 268 305 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 8 449 3.5E-296 T 29-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 SUPERFAMILY SSF53383 74 450 4.03E-120 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 Gene3D G3DSA:3.40.640.10 91 339 7.9E-85 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 Hamap MF_01276 Putrescine aminotransferase [patA]. 1 459 91.077 T 29-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 AM460_RS08090 f988a7a06ca57f5cd7bd1d2d3449f849 459 PIRSF PIRSF000521 54 452 1.1E-45 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 Pfam PF00012 Hsp70 protein 4 602 2.8E-271 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 6.3E-294 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100920 384 539 1.29E-61 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 187 382 5.12E-69 T 29-03-2018 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100934 507 602 6.54E-31 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.27 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 273 394 8.7E-27 T 29-03-2018 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 193 272 8.0E-23 T 29-03-2018 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 4 183 3.56E-66 T 29-03-2018 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 1 192 9.5E-81 T 29-03-2018 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:2.60.34.10 395 531 6.2E-65 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM460_RS00040 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:1.20.1270.10 532 618 7.3E-22 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.474 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 Pfam PF00308 Bacterial dnaA protein 133 349 3.9E-99 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:1.10.8.60 298 369 7.0E-28 T 29-03-2018 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 SMART SM00760 375 444 6.1E-45 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:1.10.1750.10 370 466 1.5E-36 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 SMART SM00382 164 366 4.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 29-03-2018 IPR024633 DnaA N-terminal domain AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 29-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:3.40.50.300 129 296 1.7E-21 T 29-03-2018 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 9.2E-188 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 SUPERFAMILY SSF52540 133 343 2.22E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04695 d32b2a2387fb39205c9d044690deb228 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.0E-32 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 SUPERFAMILY SSF81296 13 104 3.5E-8 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 SUPERFAMILY SSF51445 117 530 3.88E-89 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 SUPERFAMILY SSF51011 530 603 3.65E-9 T 29-03-2018 AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 Gene3D G3DSA:2.60.40.1180 525 604 5.2E-12 T 29-03-2018 AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 Gene3D G3DSA:2.60.40.10 5 113 1.3E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 PIRSF PIRSF036918 1 603 1.2E-245 T 29-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 SMART SM00642 127 521 3.7E-89 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 Pfam PF00128 Alpha amylase, catalytic domain 177 493 4.9E-89 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 109 9.1E-9 T 29-03-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 AM460_RS24355 6b714f3d318fe2a591b142ebd7a84149 604 Gene3D G3DSA:3.20.20.80 115 523 1.9E-86 T 29-03-2018 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 SUPERFAMILY SSF55681 4 255 1.04E-108 T 29-03-2018 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.5E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.5E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.5E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.5E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 SUPERFAMILY SSF55186 552 708 1.57E-52 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 Gene3D G3DSA:3.30.980.10 553 713 4.4E-47 T 29-03-2018 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 SUPERFAMILY SSF101353 256 465 4.58E-62 T 29-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 SUPERFAMILY SSF50447 455 551 1.41E-21 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 Gene3D G3DSA:3.30.930.10 2 252 7.6E-119 T 29-03-2018 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 9.2E-18 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 SMART SM00863 653 696 7.6E-22 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 Pfam PF01411 tRNA synthetases class II (A) 7 556 4.8E-241 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 Pfam PF02272 DHHA1 domain 732 871 3.0E-31 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM460_RS10790 af05c7129ec5959b40a97e7d7cbfd2f8 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 210.034 T 29-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.833 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 SUPERFAMILY SSF55681 8 292 2.61E-134 T 29-03-2018 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 2.5E-150 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:3.30.930.10 1 214 1.0E-87 T 29-03-2018 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 2.3E-178 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05460 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:1.20.58.180 216 294 2.1E-32 T 29-03-2018 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 3.7E-70 T 29-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 SUPERFAMILY SSF54197 3 177 2.55E-73 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 29-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 Gene3D G3DSA:3.30.428.10 165 345 4.5E-59 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 PIRSF PIRSF000808 1 341 8.6E-129 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 SUPERFAMILY SSF54197 179 345 7.66E-59 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 6.1E-73 T 29-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 Gene3D G3DSA:3.30.428.10 45 164 1.3E-50 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM460_RS22540 310fc7f6f87a258883f76fd543366f1a 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 1.4E-214 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 180 215 2.2E-5 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 48 66 0.032 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 143 173 1.7E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 85 101 72.0 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 SUPERFAMILY SSF81901 25 103 3.27E-12 T 29-03-2018 AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 SUPERFAMILY SSF81901 85 215 2.49E-19 T 29-03-2018 AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 35 66 3.3 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 67 101 14.0 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 179 216 3.6E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 142 177 2.3E-5 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Gene3D G3DSA:2.60.40.1180 24 47 0.2 T 29-03-2018 AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Gene3D G3DSA:2.60.40.1180 128 171 1.5E-7 T 29-03-2018 AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Gene3D G3DSA:2.60.40.1180 78 127 0.0021 T 29-03-2018 AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Gene3D G3DSA:2.60.40.1180 172 222 0.0018 T 29-03-2018 AM460_RS02480 23da7f75db954231bbdfb9ce621a0c3e 229 Gene3D G3DSA:2.60.40.1180 48 77 4.8E-4 T 29-03-2018 AM460_RS16385 a1709f4294ad0b8bdb7696b16ec7e683 286 PIRSF PIRSF006221 1 286 8.5E-95 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM460_RS16385 a1709f4294ad0b8bdb7696b16ec7e683 286 Gene3D G3DSA:3.30.200.20 1 91 1.0E-18 T 29-03-2018 AM460_RS16385 a1709f4294ad0b8bdb7696b16ec7e683 286 Pfam PF03881 Fructosamine kinase 1 285 1.1E-114 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM460_RS16385 a1709f4294ad0b8bdb7696b16ec7e683 286 SUPERFAMILY SSF56112 4 280 1.13E-41 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS16385 a1709f4294ad0b8bdb7696b16ec7e683 286 Gene3D G3DSA:3.90.1200.10 95 279 1.1E-17 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 SMART SM00382 94 248 3.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 Gene3D G3DSA:3.30.230.10 288 457 1.6E-31 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.5E-9 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 SUPERFAMILY SSF52540 71 291 1.76E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.376 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 SUPERFAMILY SSF54211 258 272 1.02E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 SUPERFAMILY SSF54211 306 457 1.02E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.9E-93 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.9E-93 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.9E-93 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.9E-93 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.9E-93 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.9E-93 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 Pfam PF13481 AAA domain 88 225 6.5E-15 T 29-03-2018 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 7.9E-240 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM460_RS00175 bf88a92f3e494c0e896bed3a8d2f42cc 460 Gene3D G3DSA:3.40.50.300 76 286 1.6E-40 T 29-03-2018 AM460_RS19190 187ceab546c123c8c714dd1699aae667 89 Gene3D G3DSA:1.10.260.40 11 84 1.1E-12 T 29-03-2018 AM460_RS19190 187ceab546c123c8c714dd1699aae667 89 Pfam PF13693 Winged helix-turn-helix DNA-binding 18 85 4.1E-28 T 29-03-2018 AM460_RS19190 187ceab546c123c8c714dd1699aae667 89 SUPERFAMILY SSF47413 14 81 3.09E-25 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS05155 6bf433ad824e5710e9d9ba7cae74ff7a 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 1.0E-46 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM460_RS05155 6bf433ad824e5710e9d9ba7cae74ff7a 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.995 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM460_RS05155 6bf433ad824e5710e9d9ba7cae74ff7a 310 Gene3D G3DSA:3.40.50.720 1 182 1.8E-22 T 29-03-2018 AM460_RS05155 6bf433ad824e5710e9d9ba7cae74ff7a 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 5.0E-138 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM460_RS05155 6bf433ad824e5710e9d9ba7cae74ff7a 310 SUPERFAMILY SSF51735 1 306 3.69E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS05155 6bf433ad824e5710e9d9ba7cae74ff7a 310 Gene3D G3DSA:3.90.25.10 183 310 4.2E-20 T 29-03-2018 AM460_RS18775 ce82713da2763efb1eadd41790172833 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 2.7E-104 T 29-03-2018 IPR009627 Uncharacterised protein family UPF0259 AM460_RS18775 ce82713da2763efb1eadd41790172833 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 246 21.937 T 29-03-2018 IPR009627 Uncharacterised protein family UPF0259 AM460_RS03670 ffc43a48b7e5b704273e2729cf55af2a 329 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 174 313 9.5E-50 T 29-03-2018 IPR012660 Thioesterase, putative AM460_RS03670 ffc43a48b7e5b704273e2729cf55af2a 329 Gene3D G3DSA:3.10.129.10 162 316 3.5E-21 T 29-03-2018 AM460_RS03670 ffc43a48b7e5b704273e2729cf55af2a 329 SUPERFAMILY SSF55729 15 162 1.69E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS03670 ffc43a48b7e5b704273e2729cf55af2a 329 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 181 314 4.6E-49 T 29-03-2018 IPR012660 Thioesterase, putative AM460_RS03670 ffc43a48b7e5b704273e2729cf55af2a 329 Gene3D G3DSA:3.40.630.30 15 161 7.5E-24 T 29-03-2018 AM460_RS03670 ffc43a48b7e5b704273e2729cf55af2a 329 Pfam PF00583 Acetyltransferase (GNAT) family 44 138 1.7E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS03670 ffc43a48b7e5b704273e2729cf55af2a 329 SUPERFAMILY SSF54637 171 313 8.25E-41 T 29-03-2018 IPR029069 HotDog domain AM460_RS21375 cd0a6e9642559c58d9666b5d66d75d8c 115 Pfam PF04965 Gene 25-like lysozyme 18 103 9.2E-15 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM460_RS21375 cd0a6e9642559c58d9666b5d66d75d8c 115 SUPERFAMILY SSF160719 13 114 1.23E-29 T 29-03-2018 AM460_RS21375 cd0a6e9642559c58d9666b5d66d75d8c 115 Gene3D G3DSA:3.10.450.40 4 115 2.4E-25 T 29-03-2018 AM460_RS20240 77cdabfde36385fd29abaf433e9fab34 402 Pfam PF07690 Major Facilitator Superfamily 20 239 7.7E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS20240 77cdabfde36385fd29abaf433e9fab34 402 Gene3D G3DSA:1.20.1250.20 4 198 4.3E-25 T 29-03-2018 AM460_RS20240 77cdabfde36385fd29abaf433e9fab34 402 SUPERFAMILY SSF103473 12 392 2.88E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS20240 77cdabfde36385fd29abaf433e9fab34 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 42.527 T 29-03-2018 IPR022855 Multidrug resistance protein MdtH AM460_RS20240 77cdabfde36385fd29abaf433e9fab34 402 Gene3D G3DSA:1.20.1250.20 199 399 2.1E-19 T 29-03-2018 AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 28 164 8.5E-23 T 29-03-2018 IPR008972 Cupredoxin AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 314 466 2.22E-18 T 29-03-2018 IPR008972 Cupredoxin AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 3 165 7.37E-26 T 29-03-2018 IPR008972 Cupredoxin AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07732 Multicopper oxidase 52 166 7.3E-27 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 346 470 2.6E-15 T 29-03-2018 IPR008972 Cupredoxin AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.839 T 29-03-2018 IPR026589 Cell division protein FtsP GO:0043093 AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 172 310 1.39E-30 T 29-03-2018 IPR008972 Cupredoxin AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07731 Multicopper oxidase 359 468 5.5E-13 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 0.0015 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF00394 Multicopper oxidase 223 287 3.7E-4 T 29-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AM460_RS08445 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 167 298 1.1E-25 T 29-03-2018 IPR008972 Cupredoxin AM460_RS19370 20a38bcd4a217784700de16d8fe0dca5 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 5.2E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS19370 20a38bcd4a217784700de16d8fe0dca5 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 5.2E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS19370 20a38bcd4a217784700de16d8fe0dca5 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 5.2E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS19370 20a38bcd4a217784700de16d8fe0dca5 139 Pfam PF00717 Peptidase S24-like 57 120 2.2E-11 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS19370 20a38bcd4a217784700de16d8fe0dca5 139 SUPERFAMILY SSF51306 13 135 7.5E-34 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS19370 20a38bcd4a217784700de16d8fe0dca5 139 Gene3D G3DSA:2.10.109.10 21 138 1.6E-24 T 29-03-2018 AM460_RS00270 1773b8007290796995fc15e5d8978d50 390 Gene3D G3DSA:3.55.50.10 121 239 4.3E-6 T 29-03-2018 AM460_RS00270 1773b8007290796995fc15e5d8978d50 390 SUPERFAMILY SSF69279 34 196 1.02E-22 T 29-03-2018 AM460_RS00270 1773b8007290796995fc15e5d8978d50 390 Pfam PF05954 Phage late control gene D protein (GPD) 127 341 9.5E-12 T 29-03-2018 AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 SUPERFAMILY SSF46785 2 77 5.68E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 Pfam PF07729 FCD domain 97 225 2.2E-20 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 Gene3D G3DSA:1.10.10.10 1 74 1.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 SMART SM00895 97 226 6.6E-22 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 SUPERFAMILY SSF48008 95 234 3.4E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 SMART SM00345 14 73 9.6E-26 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 3.9E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00800 ac7c1f4a74ab6cbe171b2fcb0b9e883c 257 Gene3D G3DSA:1.20.120.530 91 239 6.5E-27 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS27885 123cab9e56c6c72d51c6d50dad2b84f4 131 SUPERFAMILY SSF56349 38 128 7.65E-9 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS27885 123cab9e56c6c72d51c6d50dad2b84f4 131 Pfam PF00589 Phage integrase family 44 125 3.0E-9 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS27885 123cab9e56c6c72d51c6d50dad2b84f4 131 Gene3D G3DSA:1.10.443.10 41 130 8.8E-9 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS25960 4295c1596b87827cb4613cc398893c08 588 Gene3D G3DSA:3.40.710.10 236 585 1.9E-78 T 29-03-2018 AM460_RS25960 4295c1596b87827cb4613cc398893c08 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 3.4E-84 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM460_RS25960 4295c1596b87827cb4613cc398893c08 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 2.5E-21 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM460_RS25960 4295c1596b87827cb4613cc398893c08 588 SUPERFAMILY SSF56519 63 234 6.93E-47 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM460_RS25960 4295c1596b87827cb4613cc398893c08 588 Gene3D G3DSA:3.90.1310.10 36 235 2.4E-44 T 29-03-2018 AM460_RS25960 4295c1596b87827cb4613cc398893c08 588 SUPERFAMILY SSF56601 235 563 1.61E-86 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 6 157 5.8E-61 T 29-03-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 7 153 5.9E-44 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 Gene3D G3DSA:3.40.50.1450 4 166 1.5E-42 T 29-03-2018 IPR023430 Peptidase HybD-like domain AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 PRINTS PR00446 Hydrogen uptake protein signature 6 18 1.3E-30 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 PRINTS PR00446 Hydrogen uptake protein signature 18 29 1.3E-30 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 PRINTS PR00446 Hydrogen uptake protein signature 38 55 1.3E-30 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 PRINTS PR00446 Hydrogen uptake protein signature 70 86 1.3E-30 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 PRINTS PR00446 Hydrogen uptake protein signature 59 69 1.3E-30 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 SUPERFAMILY SSF53163 5 163 4.71E-44 T 29-03-2018 IPR023430 Peptidase HybD-like domain AM460_RS20660 d90137f3ae0f717f4fe864a406d11237 195 Pfam PF01750 Hydrogenase maturation protease 23 151 2.8E-40 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 5.9E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 5.9E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 5.9E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 5.9E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 5.9E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 5.9E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 Pfam PF00771 FHIPEP family 31 680 1.0E-269 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 29-03-2018 IPR025505 FHIPEP conserved site AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 8.2E-286 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AM460_RS15575 e72dc7de8a86314e7f8b45d60974484c 692 PIRSF PIRSF005419 9 692 1.1E-243 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 129 9.6E-30 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 Gene3D G3DSA:3.90.180.10 1 154 1.7E-43 T 29-03-2018 AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 SUPERFAMILY SSF50129 1 169 1.67E-43 T 29-03-2018 IPR011032 GroES-like AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 SMART SM00829 9 335 0.005 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 Pfam PF00107 Zinc-binding dehydrogenase 171 297 9.1E-29 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 Gene3D G3DSA:3.40.50.10730 155 325 4.4E-30 T 29-03-2018 AM460_RS22790 3af039ed7eba26fe3793f4814622746f 337 SUPERFAMILY SSF51735 138 299 4.93E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 SUPERFAMILY SSF51126 214 696 6.28E-46 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 Pfam PF03212 Pertactin 605 687 8.1E-6 T 29-03-2018 IPR004899 Pertactin, central region AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 598 995 1.0E-88 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 SMART SM00869 734 984 4.0E-43 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 Gene3D G3DSA:2.160.20.20 21 466 2.0E-6 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 Gene3D G3DSA:2.160.20.20 467 708 1.0E-8 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 SUPERFAMILY SSF103515 703 995 8.89E-55 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 PRINTS PR01484 Pertactin virulence factor family signature 975 995 7.1E-9 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 PRINTS PR01484 Pertactin virulence factor family signature 734 754 7.1E-9 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 PRINTS PR01484 Pertactin virulence factor family signature 884 907 7.1E-9 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 PRINTS PR01484 Pertactin virulence factor family signature 950 975 7.1E-9 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 PRINTS PR01484 Pertactin virulence factor family signature 774 798 7.1E-9 T 29-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 Gene3D G3DSA:2.40.128.130 709 995 2.4E-49 T 29-03-2018 AM460_RS24520 9065b3ea130f6ad8bcf3fdccdfea116c 995 Pfam PF03797 Autotransporter beta-domain 737 974 5.8E-45 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS06660 085260eaaeb4effbbb663b55abd10edd 601 Gene3D G3DSA:1.20.91.10 228 308 4.1E-13 T 29-03-2018 AM460_RS06660 085260eaaeb4effbbb663b55abd10edd 601 Pfam PF02254 TrkA-N domain 403 514 9.6E-25 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM460_RS06660 085260eaaeb4effbbb663b55abd10edd 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 2.4E-94 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM460_RS06660 085260eaaeb4effbbb663b55abd10edd 601 SUPERFAMILY SSF51735 402 529 1.69E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS06660 085260eaaeb4effbbb663b55abd10edd 601 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 8.4E-69 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM460_RS06660 085260eaaeb4effbbb663b55abd10edd 601 Gene3D G3DSA:3.40.50.720 397 562 7.9E-20 T 29-03-2018 AM460_RS06660 085260eaaeb4effbbb663b55abd10edd 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.433 T 29-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 AM460_RS11100 41f7388405d0eaf6c2f0f63a4eb34170 129 Gene3D G3DSA:3.30.1330.70 1 124 1.2E-27 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS11100 41f7388405d0eaf6c2f0f63a4eb34170 129 PIRSF PIRSF001007 1 125 6.7E-49 T 29-03-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 AM460_RS11100 41f7388405d0eaf6c2f0f63a4eb34170 129 SUPERFAMILY SSF103084 2 120 9.94E-30 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS11100 41f7388405d0eaf6c2f0f63a4eb34170 129 Pfam PF05866 Endodeoxyribonuclease RusA 6 118 1.2E-16 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS09350 52a7cb336be410be4d4a8c7ed3918fc6 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 1.8E-113 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM460_RS09350 52a7cb336be410be4d4a8c7ed3918fc6 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 7.2E-143 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS09350 52a7cb336be410be4d4a8c7ed3918fc6 433 PIRSF PIRSF006066 4 433 6.7E-165 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 Pfam PF12833 Helix-turn-helix domain 164 242 3.5E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 1.4E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 1.4E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 236 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 Gene3D G3DSA:1.10.10.60 190 247 2.6E-12 T 29-03-2018 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 SMART SM00342 158 240 2.0E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 SUPERFAMILY SSF46689 193 242 2.73E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS05740 ca01e0ce3a8057b02081bb4a10cce5e1 274 Gene3D G3DSA:1.10.10.60 141 189 3.8E-5 T 29-03-2018 AM460_RS07605 4065641b410de42ba87d75d453d9c75c 150 Pfam PF17384 RimP C-terminal SH3 domain 85 150 1.1E-22 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM460_RS07605 4065641b410de42ba87d75d453d9c75c 150 SUPERFAMILY SSF75420 3 82 4.45E-25 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM460_RS07605 4065641b410de42ba87d75d453d9c75c 150 SUPERFAMILY SSF74942 83 150 3.4E-17 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM460_RS07605 4065641b410de42ba87d75d453d9c75c 150 Gene3D G3DSA:2.30.30.180 87 147 2.0E-18 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM460_RS07605 4065641b410de42ba87d75d453d9c75c 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.786 T 29-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AM460_RS07605 4065641b410de42ba87d75d453d9c75c 150 Gene3D G3DSA:3.30.300.70 1 79 2.6E-27 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM460_RS07605 4065641b410de42ba87d75d453d9c75c 150 Pfam PF02576 RimP N-terminal domain 12 82 1.7E-28 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 2 186 1.3E-34 T 29-03-2018 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 8 221 1.94E-61 T 29-03-2018 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF14450 Cell division protein FtsA 207 381 8.9E-25 T 29-03-2018 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 PIRSF PIRSF003101 2 420 6.4E-153 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 5.3E-30 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.90.640.10 248 300 3.9E-19 T 29-03-2018 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 197 247 1.8E-6 T 29-03-2018 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.2E-161 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.576 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 198 384 1.36E-47 T 29-03-2018 AM460_RS25910 7b58e674ba3dcc106ceb417c9db138f7 420 SMART SM00842 10 196 1.1E-96 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 Gene3D G3DSA:3.40.50.720 1 150 3.5E-54 T 29-03-2018 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 2.4E-199 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 SUPERFAMILY SSF55347 126 274 1.11E-62 T 29-03-2018 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 SUPERFAMILY SSF51735 2 150 1.44E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 47.508 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 Gene3D G3DSA:1.10.1740.10 312 396 5.8E-30 T 29-03-2018 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 2.0E-41 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 SUPERFAMILY SSF69055 301 393 1.7E-30 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 PIRSF PIRSF006205 1 398 5.4E-161 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 6.3E-50 T 29-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM460_RS25440 da92579dd2502cd0c869fc3323ab079b 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 5.6E-36 T 29-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM460_RS14525 8f247921244922affada4c218a5531d6 252 Pfam PF07090 Putative glutamine amidotransferase 9 250 3.5E-114 T 29-03-2018 IPR010768 Putative glutamine amidotransferase AM460_RS14525 8f247921244922affada4c218a5531d6 252 SUPERFAMILY SSF52317 9 251 1.73E-73 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS14525 8f247921244922affada4c218a5531d6 252 PIRSF PIRSF034405 5 252 7.4E-134 T 29-03-2018 IPR017027 Uncharacterised conserved protein UCP034405 AM460_RS14525 8f247921244922affada4c218a5531d6 252 Gene3D G3DSA:3.40.50.880 1 252 2.2E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS10835 f4b7687a49e4061c8c65ddda7b06c132 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 1.0E-171 T 29-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM460_RS10835 f4b7687a49e4061c8c65ddda7b06c132 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 227.977 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM460_RS10835 f4b7687a49e4061c8c65ddda7b06c132 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 1.1E-276 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM460_RS10835 f4b7687a49e4061c8c65ddda7b06c132 518 SUPERFAMILY SSF55931 4 514 9.81E-203 T 29-03-2018 AM460_RS18920 a855ee757d687ff1874a7b7bc43d9126 268 Pfam PF00753 Metallo-beta-lactamase superfamily 33 226 9.5E-16 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS18920 a855ee757d687ff1874a7b7bc43d9126 268 SMART SM00849 31 264 2.6E-5 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS18920 a855ee757d687ff1874a7b7bc43d9126 268 SUPERFAMILY SSF56281 31 266 1.27E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS18920 a855ee757d687ff1874a7b7bc43d9126 268 Gene3D G3DSA:3.60.15.10 2 267 2.3E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 29-03-2018 IPR019844 Cold-shock conserved site AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 8.7E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.0E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS15875 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 69 7.0E-30 T 29-03-2018 AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 6.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 6.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 356 4.1E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 SUPERFAMILY SSF55874 192 354 1.7E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 Gene3D G3DSA:1.10.287.130 132 198 3.5E-8 T 29-03-2018 AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 SMART SM00388 142 202 3.0E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 SUPERFAMILY SSF47384 126 199 2.55E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 200 5.5E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 SMART SM00387 249 357 2.2E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 Gene3D G3DSA:3.30.565.10 207 363 9.9E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02270 c46a17cb9a57e724ab13791dac6d6dba 363 SMART SM00304 89 141 4.3E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 2.2E-29 T 29-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 SUPERFAMILY SSF52540 188 503 1.25E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 2.7E-249 T 29-03-2018 IPR004482 Mg chelatase-related protein AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 Gene3D G3DSA:3.40.50.300 189 386 1.6E-22 T 29-03-2018 AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 Gene3D G3DSA:3.30.230.10 2 188 1.4E-36 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.2E-44 T 29-03-2018 AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 Gene3D G3DSA:1.10.8.300 396 502 0.0016 T 29-03-2018 AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 SUPERFAMILY SSF54211 11 169 8.72E-29 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 1.9E-89 T 29-03-2018 IPR000523 Magnesium chelatase ChlI domain AM460_RS04370 f1803c257123452ebf3b8dea1c1b2d3c 506 SMART SM00382 209 389 3.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS04115 cd9da0cb6e8b5fa40b63fb915baf0b61 238 Gene3D G3DSA:3.40.50.1000 1 238 3.4E-22 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04115 cd9da0cb6e8b5fa40b63fb915baf0b61 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 9.1E-14 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04115 cd9da0cb6e8b5fa40b63fb915baf0b61 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 199 3.6E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS04115 cd9da0cb6e8b5fa40b63fb915baf0b61 238 SUPERFAMILY SSF56784 10 238 1.53E-39 T 29-03-2018 IPR023214 HAD-like domain AM460_RS15750 f6fa3f4c42571a28c66823d46939180b 219 Pfam PF04391 Protein of unknown function (DUF533) 33 209 2.8E-48 T 29-03-2018 IPR007486 Inner membrane protein YebE AM460_RS15750 f6fa3f4c42571a28c66823d46939180b 219 SUPERFAMILY SSF158682 88 212 2.22E-17 T 29-03-2018 AM460_RS15750 f6fa3f4c42571a28c66823d46939180b 219 Gene3D G3DSA:1.10.3680.10 75 219 1.1E-14 T 29-03-2018 IPR029024 TerB-like AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF00270 DEAD/DEAH box helicase 31 195 1.7E-51 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF03880 DbpA RNA binding domain 489 558 2.4E-20 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 SUPERFAMILY SSF52540 75 361 3.81E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 SMART SM00487 25 223 4.7E-65 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 SMART SM00490 259 340 4.8E-32 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 560 47.28 T 29-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 Gene3D G3DSA:3.40.50.300 2 219 1.8E-60 T 29-03-2018 AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF00271 Helicase conserved C-terminal domain 232 340 3.9E-29 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 Gene3D G3DSA:3.40.50.300 220 408 1.2E-42 T 29-03-2018 AM460_RS07650 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF12343 Cold shock protein DEAD box A 568 629 1.6E-11 T 29-03-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 Gene3D G3DSA:3.40.50.980 145 280 1.4E-26 T 29-03-2018 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 SUPERFAMILY SSF56801 8 449 5.63E-95 T 29-03-2018 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 423 2.5E-7 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 Gene3D G3DSA:3.30.300.30 351 451 1.3E-16 T 29-03-2018 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 Gene3D G3DSA:3.40.50.980 5 144 3.2E-22 T 29-03-2018 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 Pfam PF00501 AMP-binding enzyme 12 355 4.8E-54 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 443 3.7E-112 T 29-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 4 446 36.977 T 29-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AM460_RS13020 ae2a976d593cc19f4931d531896eb8ae 451 Gene3D G3DSA:2.30.38.10 281 350 1.6E-9 T 29-03-2018 AM460_RS26325 1d41ba8dcb3f66af9f0520df507ea56f 301 Gene3D G3DSA:1.10.10.10 1 88 3.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26325 1d41ba8dcb3f66af9f0520df507ea56f 301 SUPERFAMILY SSF53850 92 289 6.79E-26 T 29-03-2018 AM460_RS26325 1d41ba8dcb3f66af9f0520df507ea56f 301 Gene3D G3DSA:3.40.190.10 96 223 2.7E-4 T 29-03-2018 AM460_RS26325 1d41ba8dcb3f66af9f0520df507ea56f 301 Pfam PF03466 LysR substrate binding domain 99 286 4.6E-10 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS26325 1d41ba8dcb3f66af9f0520df507ea56f 301 SUPERFAMILY SSF46785 1 87 4.46E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26325 1d41ba8dcb3f66af9f0520df507ea56f 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.3E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 Gene3D G3DSA:3.50.50.60 102 237 6.1E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 4.1E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 Gene3D G3DSA:3.50.50.60 238 346 7.1E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.7E-20 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.7E-20 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 7.7E-20 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 7.7E-20 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 7.7E-20 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 56.012 T 29-03-2018 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 Gene3D G3DSA:3.50.50.60 2 101 5.6E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 7.4E-14 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 7.4E-14 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.4E-14 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 7.4E-14 T 29-03-2018 AM460_RS10715 fa0b942a2f544e5e3518b077127c220e 377 SUPERFAMILY SSF51905 5 301 1.71E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS16140 ca9068625d7d29c71de9af920f83eef1 326 PRINTS PR00069 Aldo-keto reductase signature 154 171 5.0E-9 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16140 ca9068625d7d29c71de9af920f83eef1 326 PRINTS PR00069 Aldo-keto reductase signature 188 217 5.0E-9 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16140 ca9068625d7d29c71de9af920f83eef1 326 PRINTS PR00069 Aldo-keto reductase signature 120 138 5.0E-9 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16140 ca9068625d7d29c71de9af920f83eef1 326 SUPERFAMILY SSF51430 1 320 6.55E-86 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS16140 ca9068625d7d29c71de9af920f83eef1 326 Gene3D G3DSA:3.20.20.100 1 325 5.1E-88 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS16140 ca9068625d7d29c71de9af920f83eef1 326 Pfam PF00248 Aldo/keto reductase family 15 320 9.8E-65 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS01330 39fdf4e72d04fe1148f80db0f65c1cd9 254 Gene3D G3DSA:1.10.10.10 1 78 5.2E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01330 39fdf4e72d04fe1148f80db0f65c1cd9 254 Pfam PF01614 Bacterial transcriptional regulator 127 249 4.1E-35 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS01330 39fdf4e72d04fe1148f80db0f65c1cd9 254 Pfam PF09339 IclR helix-turn-helix domain 12 61 5.7E-8 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS01330 39fdf4e72d04fe1148f80db0f65c1cd9 254 SUPERFAMILY SSF46785 10 81 1.79E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01330 39fdf4e72d04fe1148f80db0f65c1cd9 254 SUPERFAMILY SSF55781 72 253 1.24E-49 T 29-03-2018 IPR029016 GAF domain-like AM460_RS01330 39fdf4e72d04fe1148f80db0f65c1cd9 254 Gene3D G3DSA:3.30.450.40 79 254 4.6E-48 T 29-03-2018 IPR029016 GAF domain-like AM460_RS01330 39fdf4e72d04fe1148f80db0f65c1cd9 254 SMART SM00346 10 97 3.3E-16 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS06335 a2fc0a1d8dbc71714befb83a0715cbb3 256 SUPERFAMILY SSF53474 3 250 1.51E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS06335 a2fc0a1d8dbc71714befb83a0715cbb3 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 7.7E-121 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM460_RS06335 a2fc0a1d8dbc71714befb83a0715cbb3 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.548 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM460_RS06335 a2fc0a1d8dbc71714befb83a0715cbb3 256 Gene3D G3DSA:3.40.50.1820 2 255 2.5E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS06335 a2fc0a1d8dbc71714befb83a0715cbb3 256 Pfam PF00561 alpha/beta hydrolase fold 15 242 1.7E-30 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS21125 c931de0e6b61e91284ce6ab75b1a941a 498 Pfam PF06074 Protein of unknown function (DUF935) 27 493 3.6E-132 T 29-03-2018 IPR009279 Protein of unknown function DUF935 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 1.6E-17 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 SUPERFAMILY SSF56300 27 360 1.78E-94 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 SUPERFAMILY SSF55816 363 543 5.76E-54 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 PRINTS PR01607 Apyrase family signature 207 224 2.1E-62 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 PRINTS PR01607 Apyrase family signature 32 50 2.1E-62 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 PRINTS PR01607 Apyrase family signature 283 303 2.1E-62 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 PRINTS PR01607 Apyrase family signature 238 261 2.1E-62 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 PRINTS PR01607 Apyrase family signature 417 440 2.1E-62 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 PRINTS PR01607 Apyrase family signature 484 503 2.1E-62 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 1.3E-32 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 Gene3D G3DSA:3.60.21.10 26 362 2.7E-81 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS23945 acd6e2367d87dbff7971d0b93bd179e7 550 Gene3D G3DSA:3.90.780.10 363 549 2.7E-49 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS02605 aaaa26ceba1e0159376c2d13c1bbe700 528 Pfam PF00563 EAL domain 273 505 3.3E-69 T 29-03-2018 IPR001633 EAL domain AM460_RS02605 aaaa26ceba1e0159376c2d13c1bbe700 528 SUPERFAMILY SSF141868 274 520 8.11E-78 T 29-03-2018 IPR001633 EAL domain AM460_RS02605 aaaa26ceba1e0159376c2d13c1bbe700 528 Pfam PF12792 CSS motif domain associated with EAL 40 243 3.5E-40 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM460_RS02605 aaaa26ceba1e0159376c2d13c1bbe700 528 SMART SM00052 267 511 1.2E-119 T 29-03-2018 IPR001633 EAL domain AM460_RS02605 aaaa26ceba1e0159376c2d13c1bbe700 528 Gene3D G3DSA:3.20.20.450 269 526 6.1E-85 T 29-03-2018 IPR001633 EAL domain AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 SUPERFAMILY SSF48179 204 381 5.1E-47 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 373 6.7E-71 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 Gene3D G3DSA:3.40.50.720 1 74 4.9E-6 T 29-03-2018 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 Gene3D G3DSA:3.40.50.720 75 200 2.0E-27 T 29-03-2018 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 4.9E-27 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 SUPERFAMILY SSF51735 1 203 7.59E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 Gene3D G3DSA:1.10.1040.10 207 382 6.3E-50 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS05270 e52144ba863b142f9f824275d6d8b500 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 42.149 T 29-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS17835 d0729ad5816d4b6c4021bdaefce3bc4d 108 Pfam PF07027 Protein of unknown function (DUF1318) 18 107 3.4E-31 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM460_RS17835 d0729ad5816d4b6c4021bdaefce3bc4d 108 PIRSF PIRSF025560 1 107 5.6E-44 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM460_RS18615 74552aeccc8177fc9f7e790251169a43 111 PIRSF PIRSF007036 1 111 2.7E-62 T 29-03-2018 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 AM460_RS18615 74552aeccc8177fc9f7e790251169a43 111 Hamap MF_01199 Anti-adapter protein IraM [iraM]. 1 107 29.451 T 29-03-2018 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 AM460_RS20525 23857bd8c0c4e9c327820a36796c4895 164 SMART SM00903 13 158 2.9E-51 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM460_RS20525 23857bd8c0c4e9c327820a36796c4895 164 Pfam PF01613 Flavin reductase like domain 13 159 1.3E-29 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM460_RS20525 23857bd8c0c4e9c327820a36796c4895 164 Gene3D G3DSA:2.30.110.10 2 159 1.2E-36 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS20525 23857bd8c0c4e9c327820a36796c4895 164 SUPERFAMILY SSF50475 1 161 5.4E-45 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS20525 23857bd8c0c4e9c327820a36796c4895 164 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 1 164 43.53 T 29-03-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 AM460_RS20525 23857bd8c0c4e9c327820a36796c4895 164 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 4 159 1.9E-87 T 29-03-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 AM460_RS10980 4be5a79cb40acf96b250805707be7707 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM460_RS10980 4be5a79cb40acf96b250805707be7707 482 Gene3D G3DSA:3.40.605.10 6 272 1.0E-107 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS10980 4be5a79cb40acf96b250805707be7707 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 4.2E-244 T 29-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AM460_RS10980 4be5a79cb40acf96b250805707be7707 482 Gene3D G3DSA:3.40.309.10 273 464 4.4E-74 T 29-03-2018 AM460_RS10980 4be5a79cb40acf96b250805707be7707 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM460_RS10980 4be5a79cb40acf96b250805707be7707 482 SUPERFAMILY SSF53720 7 481 2.23E-178 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS10980 4be5a79cb40acf96b250805707be7707 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 2.3E-177 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS07875 b7e78ea1a349b7fceffebc8d35da2c32 764 Gene3D G3DSA:3.20.70.20 6 764 1.3E-281 T 29-03-2018 AM460_RS07875 b7e78ea1a349b7fceffebc8d35da2c32 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 7.1E-195 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM460_RS07875 b7e78ea1a349b7fceffebc8d35da2c32 764 PIRSF PIRSF000379 12 764 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM460_RS07875 b7e78ea1a349b7fceffebc8d35da2c32 764 Pfam PF01228 Glycine radical 634 745 4.7E-42 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM460_RS07875 b7e78ea1a349b7fceffebc8d35da2c32 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM460_RS07875 b7e78ea1a349b7fceffebc8d35da2c32 764 SUPERFAMILY SSF51998 8 762 1.63E-284 T 29-03-2018 AM460_RS07875 b7e78ea1a349b7fceffebc8d35da2c32 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM460_RS11530 802a622f16887530be1ab825e4ad3e5c 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 6.5E-26 T 29-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AM460_RS11530 802a622f16887530be1ab825e4ad3e5c 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 6.8E-37 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM460_RS11530 802a622f16887530be1ab825e4ad3e5c 216 PIRSF PIRSF016938 1 205 5.0E-37 T 29-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 AM460_RS11530 802a622f16887530be1ab825e4ad3e5c 216 SUPERFAMILY SSF89069 1 66 1.44E-22 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM460_RS26095 807366e6f406d83315979a1c58ac9320 566 Gene3D G3DSA:3.30.420.40 274 550 6.4E-49 T 29-03-2018 AM460_RS26095 807366e6f406d83315979a1c58ac9320 566 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 552 1.3E-279 T 29-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 AM460_RS26095 807366e6f406d83315979a1c58ac9320 566 SUPERFAMILY SSF53067 5 284 5.7E-21 T 29-03-2018 AM460_RS26095 807366e6f406d83315979a1c58ac9320 566 Gene3D G3DSA:3.30.420.40 1 273 1.6E-38 T 29-03-2018 AM460_RS26095 807366e6f406d83315979a1c58ac9320 566 SUPERFAMILY SSF53067 285 545 8.2E-42 T 29-03-2018 AM460_RS26095 807366e6f406d83315979a1c58ac9320 566 Hamap MF_00520 Ribulokinase [araB]. 1 558 59.746 T 29-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 AM460_RS26095 807366e6f406d83315979a1c58ac9320 566 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 1.4E-36 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS14880 746ed356cf0e2ee95b2bada90caa0905 80 Hamap MF_01549 Protein DsrB [dsrB]. 19 80 29.631 T 29-03-2018 IPR019717 Dextransucrase DSRB AM460_RS14880 746ed356cf0e2ee95b2bada90caa0905 80 Pfam PF10781 Dextransucrase DSRB 19 78 4.8E-36 T 29-03-2018 IPR019717 Dextransucrase DSRB AM460_RS19915 e1b8335e889f3d766c1763a26aadf02c 373 SUPERFAMILY SSF51197 7 292 2.47E-75 T 29-03-2018 AM460_RS19915 e1b8335e889f3d766c1763a26aadf02c 373 SMART SM00558 92 215 2.1E-11 T 29-03-2018 IPR003347 JmjC domain AM460_RS19915 e1b8335e889f3d766c1763a26aadf02c 373 Gene3D G3DSA:2.60.120.650 2 209 5.6E-29 T 29-03-2018 AM460_RS19915 e1b8335e889f3d766c1763a26aadf02c 373 Pfam PF08007 Cupin superfamily protein 10 310 1.6E-104 T 29-03-2018 IPR003347 JmjC domain AM460_RS01445 1c8c168cbcb4f13d9a56b21f13000a7d 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 9.7E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS01445 1c8c168cbcb4f13d9a56b21f13000a7d 197 Gene3D G3DSA:1.10.10.60 6 67 6.2E-16 T 29-03-2018 AM460_RS01445 1c8c168cbcb4f13d9a56b21f13000a7d 197 Gene3D G3DSA:1.10.357.10 68 192 5.5E-10 T 29-03-2018 AM460_RS01445 1c8c168cbcb4f13d9a56b21f13000a7d 197 SUPERFAMILY SSF48498 89 190 1.14E-13 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS01445 1c8c168cbcb4f13d9a56b21f13000a7d 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS01445 1c8c168cbcb4f13d9a56b21f13000a7d 197 SUPERFAMILY SSF46689 9 89 4.19E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS23370 6d36c2f5976cbb0457121dbfdd44acc1 406 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 234 1.8E-15 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM460_RS23370 6d36c2f5976cbb0457121dbfdd44acc1 406 Pfam PF11922 Domain of unknown function (DUF3440) 237 343 4.5E-26 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 AM460_RS23370 6d36c2f5976cbb0457121dbfdd44acc1 406 Pfam PF11922 Domain of unknown function (DUF3440) 352 384 6.2E-8 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 AM460_RS23370 6d36c2f5976cbb0457121dbfdd44acc1 406 SUPERFAMILY SSF52402 13 231 6.41E-41 T 29-03-2018 AM460_RS23370 6d36c2f5976cbb0457121dbfdd44acc1 406 Gene3D G3DSA:3.40.50.620 9 237 5.8E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS24065 12c7241ea3ff19fca3246f734db77c39 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 1.5E-33 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS24065 12c7241ea3ff19fca3246f734db77c39 72 SUPERFAMILY SSF68989 2 72 9.94E-32 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS24065 12c7241ea3ff19fca3246f734db77c39 72 Gene3D G3DSA:1.20.1280.40 6 71 2.6E-34 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 SUPERFAMILY SSF55904 610 754 6.41E-37 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 Gene3D G3DSA:3.40.640.10 140 444 2.9E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 Gene3D G3DSA:3.90.1150.10 447 639 9.4E-54 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 18 134 4.7E-25 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 Gene3D G3DSA:3.90.100.10 640 755 6.8E-29 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 381 395 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 SUPERFAMILY SSF53383 140 607 1.43E-111 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 615 743 1.4E-43 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 140 590 2.0E-196 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS02235 7ef05a7f1fdcaaeba61a28a4aa71d22f 755 PIRSF PIRSF009393 1 755 3.1E-274 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 SMART SM00342 185 268 1.4E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:1.10.10.60 223 277 8.2E-17 T 29-03-2018 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 SUPERFAMILY SSF46689 222 273 2.87E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 Pfam PF12833 Helix-turn-helix domain 191 270 4.3E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS03300 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:2.60.120.10 42 222 1.7E-16 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS15420 3b8e4c3d13393b7314207705322a4d74 74 Pfam PF05489 Phage Tail Protein X 7 65 6.4E-14 T 29-03-2018 IPR008861 Phage Tail Protein X-like AM460_RS15420 3b8e4c3d13393b7314207705322a4d74 74 Gene3D G3DSA:3.10.350.10 3 73 2.4E-4 T 29-03-2018 AM460_RS12225 2bc08bcb10778ce42f0ad19023e7f428 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.9E-127 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM460_RS12225 2bc08bcb10778ce42f0ad19023e7f428 303 SUPERFAMILY SSF53686 4 289 5.11E-93 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS12225 2bc08bcb10778ce42f0ad19023e7f428 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM460_RS12225 2bc08bcb10778ce42f0ad19023e7f428 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 3.5E-170 T 29-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM460_RS12225 2bc08bcb10778ce42f0ad19023e7f428 303 Gene3D G3DSA:3.40.50.1100 19 129 5.4E-35 T 29-03-2018 AM460_RS12225 2bc08bcb10778ce42f0ad19023e7f428 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 3.7E-69 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS12225 2bc08bcb10778ce42f0ad19023e7f428 303 Gene3D G3DSA:3.40.50.1100 130 303 2.6E-47 T 29-03-2018 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 Pfam PF00889 Elongation factor TS 71 263 2.2E-66 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 80.24 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 29-03-2018 IPR009060 UBA-like GO:0005515 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 149 279 3.1E-48 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 3.1E-123 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 56 139 1.24E-20 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:1.10.8.10 1 56 1.0E-23 T 29-03-2018 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 58 148 9.3E-16 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS25455 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 142 281 1.31E-53 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 SUPERFAMILY SSF53062 3 128 1.09E-37 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 Pfam PF03610 PTS system fructose IIA component 5 116 1.9E-35 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 Gene3D G3DSA:3.40.50.510 2 136 2.0E-37 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 SUPERFAMILY SSF52728 162 321 9.16E-55 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 311 1.1E-56 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 1.4E-55 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 Gene3D G3DSA:3.40.35.10 163 319 3.8E-60 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS15910 ae8387080350e49ef508c133cc8367fa 323 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 3.7E-52 T 29-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 AM460_RS22390 579da4df312700556fdc4b955f97e77e 234 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 230 7.1E-60 T 29-03-2018 IPR006214 Bax inhibitor 1-related AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 Gene3D G3DSA:3.40.50.261 121 290 5.3E-54 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 Pfam PF02629 CoA binding domain 6 99 2.2E-29 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 SUPERFAMILY SSF51735 1 123 3.4E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 42.118 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 Gene3D G3DSA:3.40.50.720 1 120 3.3E-45 T 29-03-2018 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 SMART SM00881 4 100 2.1E-37 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 PIRSF PIRSF001553 1 290 3.9E-129 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 1.7E-38 T 29-03-2018 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 1.7E-38 T 29-03-2018 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.7E-38 T 29-03-2018 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 1.7E-38 T 29-03-2018 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.6E-138 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 Pfam PF00549 CoA-ligase 152 266 5.3E-18 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS02665 6eb3ee5fae5d46daede29d42f19c2452 290 SUPERFAMILY SSF52210 124 287 1.31E-54 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS16655 45b221a7f65fe18aefeef1bec5704c51 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 8.0E-25 T 29-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AM460_RS16655 45b221a7f65fe18aefeef1bec5704c51 78 PIRSF PIRSF002855 1 78 1.6E-28 T 29-03-2018 IPR016367 Murein-lipoprotein AM460_RS16655 45b221a7f65fe18aefeef1bec5704c51 78 Gene3D G3DSA:1.20.5.190 22 73 1.7E-17 T 29-03-2018 AM460_RS16655 45b221a7f65fe18aefeef1bec5704c51 78 SUPERFAMILY SSF58042 24 74 2.49E-23 T 29-03-2018 AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:2.30.38.10 349 431 4.4E-22 T 29-03-2018 AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:3.40.50.980 198 348 7.3E-42 T 29-03-2018 AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:3.30.300.30 432 536 2.0E-27 T 29-03-2018 AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 SUPERFAMILY SSF56801 24 535 8.9E-143 T 29-03-2018 AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 Pfam PF00501 AMP-binding enzyme 31 439 3.3E-100 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 525 3.0E-18 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS16525 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:3.40.50.980 23 197 6.0E-36 T 29-03-2018 AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 Gene3D G3DSA:3.40.930.10 145 279 4.1E-4 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 Gene3D G3DSA:3.40.930.10 3 143 1.1E-34 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 3.5E-25 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 Gene3D G3DSA:3.30.1340.10 282 369 2.9E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 SUPERFAMILY SSF55804 2 140 1.57E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.1E-29 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 SUPERFAMILY SSF55594 287 375 5.5E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 SUPERFAMILY SSF55804 150 276 2.79E-12 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.1E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.1E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.1E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS13500 76d373ba0068fd85094e2559dd07a94a 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 1.6E-21 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS20210 67518bce8b401163aa75976ff1acc558 97 SUPERFAMILY SSF101498 1 89 6.93E-13 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM460_RS20210 67518bce8b401163aa75976ff1acc558 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.9E-20 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM460_RS20210 67518bce8b401163aa75976ff1acc558 97 Gene3D G3DSA:1.10.287.1160 60 88 1.8E-9 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM460_RS20210 67518bce8b401163aa75976ff1acc558 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 88 1.5E-9 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AM460_RS10435 be6f94efd968d53cc653e4c4a6dd7f0c 259 SMART SM00893 30 212 9.1E-4 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS10435 be6f94efd968d53cc653e4c4a6dd7f0c 259 Pfam PF01012 Electron transfer flavoprotein domain 47 213 1.1E-17 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS10435 be6f94efd968d53cc653e4c4a6dd7f0c 259 SUPERFAMILY SSF52402 1 248 3.17E-35 T 29-03-2018 AM460_RS10435 be6f94efd968d53cc653e4c4a6dd7f0c 259 Gene3D G3DSA:3.40.50.620 1 256 4.6E-33 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS10435 be6f94efd968d53cc653e4c4a6dd7f0c 259 PIRSF PIRSF000090 1 258 5.3E-44 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 SUPERFAMILY SSF50692 631 774 1.74E-37 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 Gene3D G3DSA:3.90.55.10 8 93 3.1E-9 T 29-03-2018 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 Gene3D G3DSA:3.90.55.10 492 567 5.9E-19 T 29-03-2018 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 Gene3D G3DSA:3.40.228.10 151 409 8.2E-58 T 29-03-2018 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 459 476 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 SUPERFAMILY SSF53706 14 633 7.2E-159 T 29-03-2018 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 Pfam PF01568 Molydopterin dinucleotide binding domain 637 740 9.0E-24 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 Gene3D G3DSA:2.40.40.20 612 771 1.7E-29 T 29-03-2018 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 Pfam PF00384 Molybdopterin oxidoreductase 56 517 1.0E-111 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 13 775 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AM460_RS05505 85a87cf3f38829f97c11e4ac511767fc 777 Gene3D G3DSA:3.40.228.10 410 491 2.3E-6 T 29-03-2018 AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 Gene3D G3DSA:2.140.10.10 234 392 1.9E-21 T 29-03-2018 AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 1.9E-133 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 Pfam PF13360 PQQ-like domain 78 319 5.5E-53 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 Gene3D G3DSA:2.140.10.10 25 194 3.3E-31 T 29-03-2018 AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.863 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SMART SM00564 114 146 1.3E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SMART SM00564 65 96 1.9E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SMART SM00564 155 186 5.3E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SMART SM00564 200 231 66.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SMART SM00564 289 320 310.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SMART SM00564 251 282 7.7E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SMART SM00564 329 361 1.6E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS11840 82e406e531b7cb05d3ef21287bb26e06 392 SUPERFAMILY SSF50998 25 382 2.55E-79 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.9E-41 T 29-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 248 366 3.7E-25 T 29-03-2018 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 1 123 6.6E-28 T 29-03-2018 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 SMART SM00480 17 362 8.4E-176 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 125 244 5.5E-30 T 29-03-2018 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.3E-45 T 29-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 1 121 5.84E-26 T 29-03-2018 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 PIRSF PIRSF000804 1 366 8.8E-119 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 8.1E-41 T 29-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 245 366 6.77E-38 T 29-03-2018 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.0E-114 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS04700 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 124 247 3.4E-33 T 29-03-2018 AM460_RS10445 c317c829e12f496268bed2f3f3bfd3db 191 SUPERFAMILY SSF110391 11 185 2.75E-56 T 29-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 AM460_RS10445 c317c829e12f496268bed2f3f3bfd3db 191 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 12 184 3.4E-63 T 29-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 AM460_RS10445 c317c829e12f496268bed2f3f3bfd3db 191 PIRSF PIRSF016897 1 190 3.6E-69 T 29-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 AM460_RS10445 c317c829e12f496268bed2f3f3bfd3db 191 Gene3D G3DSA:3.20.20.400 3 185 5.8E-66 T 29-03-2018 AM460_RS03795 0ac24f86baefe1d56d1e249f441da72a 208 PIRSF PIRSF001488 1 208 4.0E-93 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM460_RS03795 0ac24f86baefe1d56d1e249f441da72a 208 Gene3D G3DSA:3.40.30.10 17 208 1.5E-34 T 29-03-2018 AM460_RS03795 0ac24f86baefe1d56d1e249f441da72a 208 SUPERFAMILY SSF52833 21 206 1.6E-46 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS03795 0ac24f86baefe1d56d1e249f441da72a 208 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM460_RS03795 0ac24f86baefe1d56d1e249f441da72a 208 Pfam PF01323 DSBA-like thioredoxin domain 40 197 1.1E-30 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Gene3D G3DSA:3.40.50.2300 818 949 3.9E-41 T 29-03-2018 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Pfam PF00072 Response regulator receiver domain 827 936 1.8E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 5.3E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 SMART SM00387 581 692 2.8E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Gene3D G3DSA:3.30.450.20 335 472 1.1E-6 T 29-03-2018 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 SUPERFAMILY SSF47384 453 535 2.16E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 SMART SM00388 469 534 1.7E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 SUPERFAMILY SSF52172 701 815 3.62E-42 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 3.7E-35 T 29-03-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Gene3D G3DSA:3.30.565.10 529 692 2.0E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 SUPERFAMILY SSF52172 824 947 1.57E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 3.6E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Gene3D G3DSA:1.10.287.130 473 528 5.8E-19 T 29-03-2018 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 4.8E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 4.8E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 4.8E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 4.8E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 27.402 T 29-03-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 SMART SM00448 825 936 7.0E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13230 6ba5cd43603a3a4866a160c7882981b0 949 SUPERFAMILY SSF55874 523 694 3.8E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03010 f40962790941588f96d9eee2557171e3 529 Gene3D G3DSA:3.40.140.20 376 519 3.4E-54 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS03010 f40962790941588f96d9eee2557171e3 529 SMART SM00798 137 461 1.0E-218 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS03010 f40962790941588f96d9eee2557171e3 529 Pfam PF02142 MGS-like domain 19 132 4.4E-31 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS03010 f40962790941588f96d9eee2557171e3 529 Gene3D G3DSA:3.40.50.1380 1 196 1.1E-77 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS03010 f40962790941588f96d9eee2557171e3 529 SMART SM00851 19 132 1.3E-62 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS03010 f40962790941588f96d9eee2557171e3 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.427 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS03010 f40962790941588f96d9eee2557171e3 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 4.9E-273 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS03010 f40962790941588f96d9eee2557171e3 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 9.1E-121 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS03010 f40962790941588f96d9eee2557171e3 529 PIRSF PIRSF000414 1 529 2.6E-228 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS03010 f40962790941588f96d9eee2557171e3 529 SUPERFAMILY SSF52335 7 197 1.57E-71 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS03010 f40962790941588f96d9eee2557171e3 529 Gene3D G3DSA:3.40.140.20 226 375 4.5E-56 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS03010 f40962790941588f96d9eee2557171e3 529 SUPERFAMILY SSF53927 221 529 2.91E-131 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM460_RS20225 3fce40b921ee7d1dbf1220cc47a116a6 307 SUPERFAMILY SSF51735 3 137 1.21E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS20225 3fce40b921ee7d1dbf1220cc47a116a6 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 1.4E-24 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM460_RS20225 3fce40b921ee7d1dbf1220cc47a116a6 307 SUPERFAMILY SSF55347 126 265 2.71E-44 T 29-03-2018 AM460_RS20225 3fce40b921ee7d1dbf1220cc47a116a6 307 Gene3D G3DSA:3.30.360.10 136 307 3.5E-17 T 29-03-2018 AM460_RS20225 3fce40b921ee7d1dbf1220cc47a116a6 307 Gene3D G3DSA:3.40.50.720 2 135 1.0E-30 T 29-03-2018 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 Gene3D G3DSA:3.30.870.10 14 241 1.6E-18 T 29-03-2018 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 SUPERFAMILY SSF56024 9 210 9.1E-28 T 29-03-2018 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 PIRSF PIRSF000850 1 451 1.9E-268 T 29-03-2018 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 SMART SM00155 352 379 2.9E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 SMART SM00155 133 159 0.012 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 SUPERFAMILY SSF56024 252 395 3.14E-19 T 29-03-2018 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 Pfam PF13091 PLD-like domain 257 405 4.9E-22 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 Pfam PF13091 PLD-like domain 40 153 7.8E-7 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS11460 aae8e4ea641c656e7edb3b128911b624 451 Gene3D G3DSA:3.30.870.10 249 419 8.4E-19 T 29-03-2018 AM460_RS10440 d8e650fce1e6d19d17cb55a299bf2236 286 Gene3D G3DSA:3.40.50.1220 161 286 3.0E-30 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS10440 d8e650fce1e6d19d17cb55a299bf2236 286 SUPERFAMILY SSF52402 3 130 9.63E-10 T 29-03-2018 AM460_RS10440 d8e650fce1e6d19d17cb55a299bf2236 286 SUPERFAMILY SSF52467 164 279 1.46E-28 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS10440 d8e650fce1e6d19d17cb55a299bf2236 286 Gene3D G3DSA:3.40.50.620 2 148 1.1E-8 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS10440 d8e650fce1e6d19d17cb55a299bf2236 286 PIRSF PIRSF000089 1 286 5.9E-62 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AM460_RS10440 d8e650fce1e6d19d17cb55a299bf2236 286 Pfam PF01012 Electron transfer flavoprotein domain 41 125 7.3E-6 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS10440 d8e650fce1e6d19d17cb55a299bf2236 286 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 165 244 1.5E-16 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 Gene3D G3DSA:1.10.540.10 76 235 3.1E-30 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 SUPERFAMILY SSF47203 360 515 5.48E-21 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 232 5.8E-16 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 9.4E-9 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 Gene3D G3DSA:1.20.140.10 353 508 1.1E-18 T 29-03-2018 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 3.9E-12 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 Gene3D G3DSA:2.40.110.10 236 352 1.4E-17 T 29-03-2018 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 SUPERFAMILY SSF56645 117 355 1.1E-46 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM460_RS25200 3824852618ba938de5d6bf17beb18092 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 5.0E-117 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Pfam PF00381 PTS HPr component phosphorylation site 7 83 4.9E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 SUPERFAMILY SSF55594 1 86 2.36E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 SUPERFAMILY SSF47831 149 247 2.62E-16 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 687 826 4.3E-32 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 119 674 1.6E-151 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 687 812 1.0E-41 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 SUPERFAMILY SSF51621 359 658 1.05E-101 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 573 588 1.2E-23 T 29-03-2018 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 609 621 1.2E-23 T 29-03-2018 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 402 421 1.2E-23 T 29-03-2018 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 556 571 1.2E-23 T 29-03-2018 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Gene3D G3DSA:1.10.274.10 150 242 9.6E-18 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 SUPERFAMILY SSF52009 233 349 6.02E-19 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 556 574 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Gene3D G3DSA:3.30.1340.10 1 84 2.8E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Gene3D G3DSA:3.50.30.10 243 364 1.2E-12 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Gene3D G3DSA:3.20.20.60 365 682 1.6E-94 T 29-03-2018 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Gene3D G3DSA:3.40.930.10 683 829 1.4E-32 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 360 650 5.0E-107 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Pfam PF05524 PEP-utilising enzyme, N-terminal 119 234 6.1E-12 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 SUPERFAMILY SSF55804 685 826 1.44E-30 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS12410 c27c51b6e2893dce694b6d64808c5638 831 Pfam PF00391 PEP-utilising enzyme, mobile domain 262 334 2.3E-13 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 Gene3D G3DSA:3.40.980.10 3 170 9.9E-36 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 SMART SM00852 14 158 3.3E-30 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 PIRSF PIRSF006443 1 166 2.0E-62 T 29-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 1.9E-39 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 2.7E-83 T 29-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 SUPERFAMILY SSF53218 7 168 1.3E-46 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22410 1d192ad9a2cf2749c9862f362feb18bc 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.5E-32 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 SUPERFAMILY SSF53335 17 266 8.85E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 3.2E-89 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 SMART SM00650 25 198 2.0E-84 T 29-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 29-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.781 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 Gene3D G3DSA:1.10.8.100 210 269 2.0E-17 T 29-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 Gene3D G3DSA:3.40.50.150 2 209 1.4E-51 T 29-03-2018 AM460_RS26145 6d43db73b61e1b8a412b1e16409d4cf6 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 3.5E-89 T 29-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM460_RS04015 59df59855cd1fade77f810f625e14c3e 502 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 427 444 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS04015 59df59855cd1fade77f810f625e14c3e 502 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 11 489 1.2E-181 T 29-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 AM460_RS04015 59df59855cd1fade77f810f625e14c3e 502 SUPERFAMILY SSF55604 416 488 6.41E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS04015 59df59855cd1fade77f810f625e14c3e 502 Pfam PF00367 phosphotransferase system, EIIB 417 449 3.5E-15 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS04015 59df59855cd1fade77f810f625e14c3e 502 Pfam PF02378 Phosphotransferase system, EIIC 18 328 4.8E-74 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS04015 59df59855cd1fade77f810f625e14c3e 502 Gene3D G3DSA:3.30.1360.60 412 488 5.0E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS04015 59df59855cd1fade77f810f625e14c3e 502 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 389 474 9.3E-22 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 SUPERFAMILY SSF89000 288 335 3.49E-18 T 29-03-2018 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 Pfam PF07836 DmpG-like communication domain 274 334 9.5E-31 T 29-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 336 6.8E-181 T 29-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 SUPERFAMILY SSF51569 3 276 9.52E-69 T 29-03-2018 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 Pfam PF00682 HMGL-like 6 262 2.6E-75 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 Gene3D G3DSA:3.20.20.70 5 278 5.0E-58 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 337 225.313 T 29-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 335 4.0E-30 T 29-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM460_RS24575 62455630aef1f7c31dc53e9579a845ff 337 Gene3D G3DSA:1.10.8.60 279 337 1.0E-32 T 29-03-2018 AM460_RS17305 a9093251d987a9173c9959f17e8e38c2 293 SUPERFAMILY SSF53850 85 283 8.59E-37 T 29-03-2018 AM460_RS17305 a9093251d987a9173c9959f17e8e38c2 293 Pfam PF03466 LysR substrate binding domain 85 282 1.5E-44 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS17305 a9093251d987a9173c9959f17e8e38c2 293 Gene3D G3DSA:3.40.190.10 83 172 6.7E-18 T 29-03-2018 AM460_RS17305 a9093251d987a9173c9959f17e8e38c2 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17305 a9093251d987a9173c9959f17e8e38c2 293 SUPERFAMILY SSF46785 1 109 3.65E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17305 a9093251d987a9173c9959f17e8e38c2 293 Gene3D G3DSA:3.40.190.10 173 260 3.7E-16 T 29-03-2018 AM460_RS17305 a9093251d987a9173c9959f17e8e38c2 293 Gene3D G3DSA:1.10.10.10 1 82 2.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 43 62 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 294 313 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 349 368 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 194 216 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 233 252 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 16 39 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 328 346 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 88 108 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 154 174 8.0E-102 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 23 39 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 13 396 1.5E-155 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS04650 bfca53b1b4b09ae579a671a7d36d9b08 415 Pfam PF03222 Tryptophan/tyrosine permease family 7 403 2.2E-149 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM460_RS01775 d07dcbb14f34e3875116c3dac353f15b 465 Pfam PF03611 PTS system sugar-specific permease component 15 410 4.5E-123 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.8E-163 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 Gene3D G3DSA:3.60.20.10 45 278 1.3E-55 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 PIRSF PIRSF000485 1 483 1.4E-173 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 Gene3D G3DSA:3.40.50.2020 279 446 5.8E-38 T 29-03-2018 AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 1.2E-7 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 Pfam PF13522 Glutamine amidotransferase domain 64 202 1.9E-15 T 29-03-2018 AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 SUPERFAMILY SSF53271 252 485 5.9E-72 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.137 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM460_RS12780 a7cdf18242fdd808b88647a0b9c557b1 505 SUPERFAMILY SSF56235 2 259 2.4E-75 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS20830 468d23790b6f99ff36028d4ad44bfeff 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 29 309 2.9E-87 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM460_RS20830 468d23790b6f99ff36028d4ad44bfeff 319 Gene3D G3DSA:3.40.190.10 24 128 2.1E-17 T 29-03-2018 AM460_RS20830 468d23790b6f99ff36028d4ad44bfeff 319 SUPERFAMILY SSF53850 26 258 6.44E-51 T 29-03-2018 AM460_RS20830 468d23790b6f99ff36028d4ad44bfeff 319 SMART SM00062 28 249 3.5E-37 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS20830 468d23790b6f99ff36028d4ad44bfeff 319 Gene3D G3DSA:3.40.190.10 129 314 5.5E-36 T 29-03-2018 AM460_RS20830 468d23790b6f99ff36028d4ad44bfeff 319 Pfam PF09084 NMT1/THI5 like 67 182 2.7E-12 T 29-03-2018 IPR015168 SsuA/THI5-like AM460_RS08595 762ab8b57554ed602ceb6f630ece1928 162 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 157 1.0E-66 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AM460_RS08595 762ab8b57554ed602ceb6f630ece1928 162 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 153 1.2E-47 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AM460_RS08595 762ab8b57554ed602ceb6f630ece1928 162 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 12 155 8.3E-42 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AM460_RS23850 cacb2a3c455890e713cdc700f6ed12ea 208 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 29-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AM460_RS23850 cacb2a3c455890e713cdc700f6ed12ea 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 187 7.2E-26 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS23850 cacb2a3c455890e713cdc700f6ed12ea 208 Gene3D G3DSA:3.40.50.1110 26 207 6.8E-39 T 29-03-2018 AM460_RS23850 cacb2a3c455890e713cdc700f6ed12ea 208 SUPERFAMILY SSF52266 29 204 2.82E-52 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS19805 a672a81372f7abd07bd347532d490e9d 251 Pfam PF01381 Helix-turn-helix 31 84 2.2E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS19805 a672a81372f7abd07bd347532d490e9d 251 SUPERFAMILY SSF51306 109 242 1.31E-21 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS19805 a672a81372f7abd07bd347532d490e9d 251 SUPERFAMILY SSF47413 22 92 3.22E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS19805 a672a81372f7abd07bd347532d490e9d 251 SMART SM00530 30 84 2.6E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS19805 a672a81372f7abd07bd347532d490e9d 251 Pfam PF00717 Peptidase S24-like 160 222 6.2E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS19805 a672a81372f7abd07bd347532d490e9d 251 Gene3D G3DSA:1.10.260.40 21 92 3.4E-18 T 29-03-2018 AM460_RS19805 a672a81372f7abd07bd347532d490e9d 251 Gene3D G3DSA:2.10.109.10 105 243 2.1E-20 T 29-03-2018 AM460_RS07735 14dc3012a74d49fce8949650f455b75a 255 Gene3D G3DSA:3.40.50.1360 20 253 4.8E-50 T 29-03-2018 AM460_RS07735 14dc3012a74d49fce8949650f455b75a 255 SUPERFAMILY SSF100950 23 253 8.79E-60 T 29-03-2018 AM460_RS07735 14dc3012a74d49fce8949650f455b75a 255 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 138 156 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM460_RS07735 14dc3012a74d49fce8949650f455b75a 255 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 28 239 5.0E-19 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM460_RS15435 bf94dd6b0d29d5a0baed2911e06ec564 221 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 2.8E-55 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM460_RS15435 bf94dd6b0d29d5a0baed2911e06ec564 221 SUPERFAMILY SSF103642 201 220 1.05E-7 T 29-03-2018 AM460_RS15435 bf94dd6b0d29d5a0baed2911e06ec564 221 SUPERFAMILY SSF101327 14 182 2.88E-23 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM460_RS15435 bf94dd6b0d29d5a0baed2911e06ec564 221 Pfam PF02810 SEC-C motif 203 220 1.8E-10 T 29-03-2018 IPR004027 SEC-C motif AM460_RS15435 bf94dd6b0d29d5a0baed2911e06ec564 221 Gene3D G3DSA:3.10.450.50 69 221 1.5E-14 T 29-03-2018 AM460_RS15435 bf94dd6b0d29d5a0baed2911e06ec564 221 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 3.1E-35 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM460_RS08490 6785684b497f6352952536f341ce094f 85 SUPERFAMILY SSF58042 24 72 2.88E-18 T 29-03-2018 AM460_RS08490 6785684b497f6352952536f341ce094f 85 Pfam PF04728 Lipoprotein leucine-zipper 25 71 2.5E-13 T 29-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AM460_RS08490 6785684b497f6352952536f341ce094f 85 Gene3D G3DSA:1.20.5.190 21 71 1.0E-12 T 29-03-2018 AM460_RS08490 6785684b497f6352952536f341ce094f 85 PIRSF PIRSF002855 1 82 1.2E-25 T 29-03-2018 IPR016367 Murein-lipoprotein AM460_RS07360 6d009ab9d5f35a3f58241b7a35cf21ac 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 38.055 T 29-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM460_RS07360 6d009ab9d5f35a3f58241b7a35cf21ac 229 SUPERFAMILY SSF51366 14 224 1.77E-56 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS07360 6d009ab9d5f35a3f58241b7a35cf21ac 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 226 1.2E-92 T 29-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM460_RS07360 6d009ab9d5f35a3f58241b7a35cf21ac 229 Gene3D G3DSA:3.20.20.70 1 229 9.9E-43 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 4.2E-36 T 29-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 9.7E-52 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 29-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 PIRSF PIRSF000203 1 509 5.5E-289 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 SMART SM01002 146 311 5.5E-85 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.7E-76 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 Gene3D G3DSA:3.40.50.720 195 377 5.8E-57 T 29-03-2018 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 29-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 510 0.0 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 SMART SM01003 4 137 5.3E-76 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 SUPERFAMILY SSF52283 1 168 1.02E-56 T 29-03-2018 AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 SUPERFAMILY SSF51735 137 317 1.69E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17070 ed598d6fe1cd0ed4ddb145f8fb2332b0 510 Gene3D G3DSA:3.40.50.720 1 194 5.3E-51 T 29-03-2018 AM460_RS15745 761d1d05f18fac9c0e78208fd8a3f517 118 Pfam PF13995 YebF-like protein 28 116 1.0E-40 T 29-03-2018 IPR025603 YebF/Colicin-M immunity protein AM460_RS15745 761d1d05f18fac9c0e78208fd8a3f517 118 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 20 118 3.0E-53 T 29-03-2018 IPR025603 YebF/Colicin-M immunity protein AM460_RS15745 761d1d05f18fac9c0e78208fd8a3f517 118 Hamap MF_01435 Protein YebF [yebF]. 1 118 37.737 T 29-03-2018 IPR020236 Uncharacterised protein family YebF AM460_RS20400 4fbea61de787f971137d5e1ca2322997 163 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 2.7E-38 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 AM460_RS23180 b458251ed6324023fcc06c87a8e71ee9 213 Pfam PF01467 Cytidylyltransferase-like 7 187 8.8E-38 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS23180 b458251ed6324023fcc06c87a8e71ee9 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 9.8E-64 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM460_RS23180 b458251ed6324023fcc06c87a8e71ee9 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 30.158 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM460_RS23180 b458251ed6324023fcc06c87a8e71ee9 213 Gene3D G3DSA:3.40.50.620 2 213 6.2E-56 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS23180 b458251ed6324023fcc06c87a8e71ee9 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 1.1E-12 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS23180 b458251ed6324023fcc06c87a8e71ee9 213 SUPERFAMILY SSF52374 3 213 1.44E-59 T 29-03-2018 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 Gene3D G3DSA:3.30.1490.20 6 197 5.1E-56 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 Gene3D G3DSA:3.30.470.20 198 359 1.9E-45 T 29-03-2018 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 SUPERFAMILY SSF52009 350 468 2.22E-35 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 Gene3D G3DSA:3.50.30.10 360 478 4.5E-36 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 SUPERFAMILY SSF56059 7 386 7.18E-110 T 29-03-2018 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 Gene3D G3DSA:3.20.20.60 480 792 3.0E-103 T 29-03-2018 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 789 1.0E-59 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 SUPERFAMILY SSF51621 467 790 7.59E-96 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 351 2.5E-122 T 29-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 7.5E-27 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM460_RS16520 60b43c026365db7f2874fb2e2954f0d9 792 PIRSF PIRSF000854 4 792 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 Gene3D G3DSA:3.40.50.970 1 363 1.1E-128 T 29-03-2018 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 6.0E-44 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 8.2E-175 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 Gene3D G3DSA:3.40.50.920 541 663 1.1E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 Gene3D G3DSA:3.40.50.970 364 540 1.4E-41 T 29-03-2018 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.4E-20 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 SMART SM00861 355 525 8.1E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 SUPERFAMILY SSF52518 336 526 4.53E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 SUPERFAMILY SSF52518 5 331 2.57E-122 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS09470 1ec90a686055ddf42f95311e2050c053 663 SUPERFAMILY SSF52922 533 663 2.36E-44 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS27705 86c795cdbe2ac7c8bcad21917187e28a 251 Gene3D G3DSA:1.10.10.10 1 155 1.2E-37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27705 86c795cdbe2ac7c8bcad21917187e28a 251 SUPERFAMILY SSF46785 144 243 2.58E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27705 86c795cdbe2ac7c8bcad21917187e28a 251 Gene3D G3DSA:1.10.10.10 156 251 2.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27705 86c795cdbe2ac7c8bcad21917187e28a 251 Pfam PF01051 Initiator Replication protein 16 242 4.6E-48 T 29-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AM460_RS27705 86c795cdbe2ac7c8bcad21917187e28a 251 SUPERFAMILY SSF46785 17 143 3.67E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 SUPERFAMILY SSF55681 162 502 2.84E-123 T 29-03-2018 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.612 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.1E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.1E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.1E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.1E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.1E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 Gene3D G3DSA:3.30.930.10 156 501 2.9E-104 T 29-03-2018 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.1E-82 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 4.6E-15 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 1.4E-239 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 SUPERFAMILY SSF50249 13 155 1.79E-48 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 Gene3D G3DSA:2.40.50.140 15 154 3.6E-41 T 29-03-2018 AM460_RS09730 94de208da804ca385f33570c2fb3ac2d 505 PIRSF PIRSF039101 1 505 1.9E-206 T 29-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS00875 2cd8a2814bf897621614f88a77620fa6 135 Gene3D G3DSA:1.10.443.10 1 118 9.4E-22 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS00875 2cd8a2814bf897621614f88a77620fa6 135 SUPERFAMILY SSF56349 1 125 3.53E-26 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS00875 2cd8a2814bf897621614f88a77620fa6 135 Pfam PF00589 Phage integrase family 2 115 2.5E-33 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS17360 fa75bbd0a42c6b5cb5e46983dcaf4a9f 88 Gene3D G3DSA:3.30.1190.10 35 85 3.8E-12 T 29-03-2018 AM460_RS17360 fa75bbd0a42c6b5cb5e46983dcaf4a9f 88 SMART SM00530 16 71 9.7E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS17360 fa75bbd0a42c6b5cb5e46983dcaf4a9f 88 SUPERFAMILY SSF47413 5 70 1.64E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS17360 fa75bbd0a42c6b5cb5e46983dcaf4a9f 88 Gene3D G3DSA:1.10.10.10 6 34 5.6E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17360 fa75bbd0a42c6b5cb5e46983dcaf4a9f 88 Pfam PF01381 Helix-turn-helix 18 69 9.0E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS10540 74dc26128b76215968daf2543c090ded 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.213 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM460_RS10540 74dc26128b76215968daf2543c090ded 208 SUPERFAMILY SSF53335 12 204 2.59E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS10540 74dc26128b76215968daf2543c090ded 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 8.5E-100 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM460_RS10540 74dc26128b76215968daf2543c090ded 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM460_RS10540 74dc26128b76215968daf2543c090ded 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 206 3.1E-82 T 29-03-2018 AM460_RS10540 74dc26128b76215968daf2543c090ded 208 Gene3D G3DSA:3.40.50.150 2 206 5.5E-38 T 29-03-2018 AM460_RS02620 51aaf3dcb27be7b8784c06c1895d0b3c 178 Gene3D G3DSA:2.40.50.140 1 118 6.3E-47 T 29-03-2018 AM460_RS02620 51aaf3dcb27be7b8784c06c1895d0b3c 178 SUPERFAMILY SSF50249 4 178 1.34E-63 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS02620 51aaf3dcb27be7b8784c06c1895d0b3c 178 PIRSF PIRSF002070 2 161 1.3E-41 T 29-03-2018 AM460_RS02620 51aaf3dcb27be7b8784c06c1895d0b3c 178 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.014 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS02620 51aaf3dcb27be7b8784c06c1895d0b3c 178 Pfam PF00436 Single-strand binding protein family 6 112 1.2E-42 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM460_RS02620 51aaf3dcb27be7b8784c06c1895d0b3c 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 3.2E-62 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM460_RS19340 1cf7b287854df0c20b387fe5423d5817 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 5.2E-73 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM460_RS19340 1cf7b287854df0c20b387fe5423d5817 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 55.703 T 29-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AM460_RS19340 1cf7b287854df0c20b387fe5423d5817 432 SUPERFAMILY SSF54373 269 359 7.19E-17 T 29-03-2018 AM460_RS19340 1cf7b287854df0c20b387fe5423d5817 432 SUPERFAMILY SSF51905 107 271 1.55E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS19340 1cf7b287854df0c20b387fe5423d5817 432 SUPERFAMILY SSF51905 1 54 1.55E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS19340 1cf7b287854df0c20b387fe5423d5817 432 SUPERFAMILY SSF51905 359 417 1.55E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS19340 1cf7b287854df0c20b387fe5423d5817 432 Gene3D G3DSA:3.50.50.60 1 423 2.7E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS03120 bb3e0d7cf8c73e995b255695bc36b470 165 SUPERFAMILY SSF160369 4 160 2.48E-48 T 29-03-2018 AM460_RS03120 bb3e0d7cf8c73e995b255695bc36b470 165 Pfam PF00466 Ribosomal protein L10 5 101 4.5E-26 T 29-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AM460_RS03120 bb3e0d7cf8c73e995b255695bc36b470 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 29-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS03120 bb3e0d7cf8c73e995b255695bc36b470 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 29-03-2018 AM460_RS03120 bb3e0d7cf8c73e995b255695bc36b470 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.856 T 29-03-2018 IPR022973 Ribosomal protein L10 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.3E-43 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.952 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Pfam PF01016 Ribosomal L27 protein 2 82 6.4E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Gene3D G3DSA:2.40.50.100 20 84 1.4E-30 T 29-03-2018 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 SUPERFAMILY SSF110324 2 81 5.58E-34 T 29-03-2018 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 29-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.9E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.9E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07525 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.9E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS25835 fc2fccfb0726b8227909ff44ab297e7f 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 167 9.4E-28 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS25835 fc2fccfb0726b8227909ff44ab297e7f 183 SUPERFAMILY SSF55846 2 179 2.62E-69 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS25835 fc2fccfb0726b8227909ff44ab297e7f 183 Gene3D G3DSA:3.40.80.10 1 183 2.6E-55 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS25835 fc2fccfb0726b8227909ff44ab297e7f 183 SMART SM00644 16 166 1.4E-62 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS26155 b22dc999951b09f64f869cae76415265 282 PIRSF PIRSF000903 1 275 1.7E-125 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM460_RS26155 b22dc999951b09f64f869cae76415265 282 Gene3D G3DSA:3.60.21.10 1 280 1.2E-46 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS26155 b22dc999951b09f64f869cae76415265 282 Pfam PF00149 Calcineurin-like phosphoesterase 4 139 9.0E-14 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS26155 b22dc999951b09f64f869cae76415265 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.741 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM460_RS26155 b22dc999951b09f64f869cae76415265 282 SUPERFAMILY SSF56300 1 259 6.38E-57 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS26155 b22dc999951b09f64f869cae76415265 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 2.8E-168 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 3.2E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 3.2E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 3.2E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 3.1E-43 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 Gene3D G3DSA:1.20.120.220 95 271 2.2E-54 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 SUPERFAMILY SSF81336 95 265 7.32E-50 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 29-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 16.155 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04500 526f66682c83db01225b83db17fb2c82 271 Pfam PF00119 ATP synthase A chain 46 265 3.9E-56 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS24150 fe4a7d96e18dc979c368d035e3e9f83f 132 SUPERFAMILY SSF54637 3 129 1.21E-37 T 29-03-2018 IPR029069 HotDog domain AM460_RS24150 fe4a7d96e18dc979c368d035e3e9f83f 132 Pfam PF13279 Thioesterase-like superfamily 11 118 1.1E-15 T 29-03-2018 AM460_RS24150 fe4a7d96e18dc979c368d035e3e9f83f 132 PIRSF PIRSF003230 1 132 9.0E-21 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM460_RS24150 fe4a7d96e18dc979c368d035e3e9f83f 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 119 2.3E-36 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM460_RS24150 fe4a7d96e18dc979c368d035e3e9f83f 132 Gene3D G3DSA:3.10.129.10 1 132 6.2E-35 T 29-03-2018 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 43.099 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 SUPERFAMILY SSF51905 97 261 2.07E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 SUPERFAMILY SSF51905 7 66 2.07E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 Gene3D G3DSA:1.10.10.10 553 629 0.031 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 0.0 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 SMART SM01228 546 617 9.2E-45 T 29-03-2018 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 Gene3D G3DSA:3.50.50.60 5 264 7.1E-76 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 Pfam PF01134 Glucose inhibited division protein A 8 398 8.2E-171 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AM460_RS04485 4a322e9c133bccec0d2cf7d3cec1e706 629 Pfam PF13932 GidA associated domain 403 616 2.7E-79 T 29-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AM460_RS10425 01640d4c5e29cf37f5a6f83e11b0cf6f 484 SUPERFAMILY SSF56176 7 225 4.35E-47 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS10425 01640d4c5e29cf37f5a6f83e11b0cf6f 484 SUPERFAMILY SSF55103 204 481 5.23E-25 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM460_RS10425 01640d4c5e29cf37f5a6f83e11b0cf6f 484 Gene3D G3DSA:3.30.43.10 3 101 3.5E-16 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM460_RS10425 01640d4c5e29cf37f5a6f83e11b0cf6f 484 Gene3D G3DSA:1.10.45.10 441 479 1.4E-7 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM460_RS10425 01640d4c5e29cf37f5a6f83e11b0cf6f 484 Pfam PF02913 FAD linked oxidases, C-terminal domain 229 478 1.3E-18 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM460_RS10425 01640d4c5e29cf37f5a6f83e11b0cf6f 484 Gene3D G3DSA:3.30.465.10 102 227 1.8E-30 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS10425 01640d4c5e29cf37f5a6f83e11b0cf6f 484 Pfam PF01565 FAD binding domain 51 190 1.8E-34 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 SUPERFAMILY SSF48150 3 225 1.88E-78 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 Gene3D G3DSA:1.10.1670.10 118 225 1.2E-32 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 168 1.8E-23 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.8E-8 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 Gene3D G3DSA:3.90.79.10 231 348 3.2E-12 T 29-03-2018 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 Gene3D G3DSA:1.10.340.30 21 117 8.9E-34 T 29-03-2018 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.5E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 3.8E-133 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 Pfam PF14815 NUDIX domain 234 343 2.3E-25 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 SUPERFAMILY SSF55811 220 344 1.3E-28 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 SMART SM00478 39 190 2.7E-56 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM460_RS09315 1b4246ed5f482ab2ff26abed5007d47e 350 SMART SM00525 191 211 0.0039 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM460_RS09665 b8d23914181ff55fc2280029e8189235 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM460_RS09665 b8d23914181ff55fc2280029e8189235 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 43.675 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM460_RS09665 b8d23914181ff55fc2280029e8189235 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.3E-61 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM460_RS09665 b8d23914181ff55fc2280029e8189235 129 SUPERFAMILY SSF51230 4 128 2.42E-46 T 29-03-2018 IPR011053 Single hybrid motif AM460_RS09665 b8d23914181ff55fc2280029e8189235 129 Gene3D G3DSA:2.40.50.100 6 129 1.5E-49 T 29-03-2018 AM460_RS09665 b8d23914181ff55fc2280029e8189235 129 Pfam PF01597 Glycine cleavage H-protein 8 128 2.9E-50 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AM460_RS21380 9acaee95d8e2b8ba7e7d8d9d9cf752c7 213 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 211 3.6E-73 T 29-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM460_RS21380 9acaee95d8e2b8ba7e7d8d9d9cf752c7 213 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 119 1.9E-47 T 29-03-2018 IPR006531 Gp5 N-terminal AM460_RS21380 9acaee95d8e2b8ba7e7d8d9d9cf752c7 213 Gene3D G3DSA:2.40.50.260 14 103 1.2E-5 T 29-03-2018 AM460_RS19680 8e21bdbba9900a9668c1d61370d45151 68 Gene3D G3DSA:3.30.1580.10 3 65 1.5E-28 T 29-03-2018 AM460_RS19680 8e21bdbba9900a9668c1d61370d45151 68 SUPERFAMILY SSF64210 1 57 5.75E-24 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 AM460_RS19680 8e21bdbba9900a9668c1d61370d45151 68 ProDom PD019366 PROPHAGE HEAD JOINING GP3 COMPLETION HEAD-TO-TAIL W PROPHAGE-DERIVED DNA HEAD-TAIL 23 65 6.0E-18 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 AM460_RS19680 8e21bdbba9900a9668c1d61370d45151 68 Pfam PF02831 gpW 1 67 3.6E-34 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 AM460_RS10475 da8bbdc40260b27277e89a92060b95c1 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 2.5E-96 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM460_RS10475 da8bbdc40260b27277e89a92060b95c1 244 Gene3D G3DSA:3.40.50.620 9 244 4.3E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS10475 da8bbdc40260b27277e89a92060b95c1 244 SUPERFAMILY SSF52402 21 208 6.85E-53 T 29-03-2018 AM460_RS10475 da8bbdc40260b27277e89a92060b95c1 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 8.8E-52 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM460_RS10475 da8bbdc40260b27277e89a92060b95c1 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 40.564 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM460_RS10475 da8bbdc40260b27277e89a92060b95c1 244 PIRSF PIRSF000857 6 244 3.2E-54 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM460_RS10475 da8bbdc40260b27277e89a92060b95c1 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 1.4E-104 T 29-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:2.60.40.10 112 223 1.2E-33 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:3.20.20.80 230 612 1.4E-71 T 29-03-2018 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 SMART SM00642 247 596 2.5E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:2.60.40.10 1 103 8.3E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.9 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 PIRSF PIRSF000463 6 728 1.9E-285 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF51011 623 726 8.15E-35 T 29-03-2018 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Pfam PF00128 Alpha amylase, catalytic domain 273 344 4.7E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 7.8E-26 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:2.60.40.1180 623 726 8.0E-34 T 29-03-2018 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 4.6E-23 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF51445 228 621 1.45E-111 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF81296 16 115 1.22E-18 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS06235 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF81296 117 223 2.62E-35 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS21280 52375f517eb8c58e1f3b6a5c0352d7b9 285 Gene3D G3DSA:1.20.1080.10 12 285 6.6E-80 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM460_RS21280 52375f517eb8c58e1f3b6a5c0352d7b9 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site AM460_RS21280 52375f517eb8c58e1f3b6a5c0352d7b9 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.9E-128 T 29-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AM460_RS21280 52375f517eb8c58e1f3b6a5c0352d7b9 285 Pfam PF01226 Formate/nitrite transporter 15 276 2.9E-76 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM460_RS21280 52375f517eb8c58e1f3b6a5c0352d7b9 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site AM460_RS21280 52375f517eb8c58e1f3b6a5c0352d7b9 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 7.4E-98 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM460_RS03250 c58da6de63553c56039856ea61e2ee34 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS03250 c58da6de63553c56039856ea61e2ee34 438 Pfam PF07690 Major Facilitator Superfamily 27 385 1.3E-25 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS03250 c58da6de63553c56039856ea61e2ee34 438 Gene3D G3DSA:1.20.1250.20 242 438 4.3E-16 T 29-03-2018 AM460_RS03250 c58da6de63553c56039856ea61e2ee34 438 Gene3D G3DSA:1.20.1250.20 11 240 7.0E-26 T 29-03-2018 AM460_RS03250 c58da6de63553c56039856ea61e2ee34 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS03250 c58da6de63553c56039856ea61e2ee34 438 SUPERFAMILY SSF103473 14 435 7.32E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 SUPERFAMILY SSF48150 3 208 8.01E-74 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 Gene3D G3DSA:1.10.340.30 25 117 9.0E-24 T 29-03-2018 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.53 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 SMART SM00525 186 206 1.4E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.8E-7 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.5E-20 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 PIRSF PIRSF001435 1 210 5.1E-52 T 29-03-2018 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 Gene3D G3DSA:1.10.1670.10 118 210 1.4E-29 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 SMART SM00478 38 185 1.6E-54 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.4E-90 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM460_RS16905 c503479cfb5a6b79a95f1fecda3f5dba 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM460_RS16240 fbb450b2821c48652b74c7d455762547 182 SUPERFAMILY SSF69118 3 173 2.88E-37 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM460_RS16240 fbb450b2821c48652b74c7d455762547 182 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 122 1.2E-7 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM460_RS16240 fbb450b2821c48652b74c7d455762547 182 Gene3D G3DSA:1.20.1290.10 17 176 1.2E-28 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM460_RS12930 aa97b48fbbac05685146b089ee53b8d6 325 Pfam PF00146 NADH dehydrogenase 17 317 3.3E-120 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12930 aa97b48fbbac05685146b089ee53b8d6 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12930 aa97b48fbbac05685146b089ee53b8d6 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.072 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12930 aa97b48fbbac05685146b089ee53b8d6 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS23010 2d55648992a641b3ec35ab2473e31ed0 382 SUPERFAMILY SSF51556 54 350 1.36E-101 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS23010 2d55648992a641b3ec35ab2473e31ed0 382 PIRSF PIRSF038994 1 382 2.0E-114 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM460_RS23010 2d55648992a641b3ec35ab2473e31ed0 382 SUPERFAMILY SSF51338 1 53 3.46E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS23010 2d55648992a641b3ec35ab2473e31ed0 382 Pfam PF01979 Amidohydrolase family 50 379 2.2E-48 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS23010 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:3.20.20.140 69 350 8.5E-93 T 29-03-2018 AM460_RS23010 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:2.30.40.10 2 68 5.8E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS23010 2d55648992a641b3ec35ab2473e31ed0 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.3E-184 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM460_RS26705 6e799587432fbe3b64bd7c98d829ee06 50 Pfam PF01848 Hok/gef family 6 46 1.7E-17 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS26705 6e799587432fbe3b64bd7c98d829ee06 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 47 4.0E-20 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS26705 6e799587432fbe3b64bd7c98d829ee06 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS26705 6e799587432fbe3b64bd7c98d829ee06 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 8.2E-15 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS26705 6e799587432fbe3b64bd7c98d829ee06 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 8.2E-15 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS14670 f359536ed96a4e197243b9afe9f82a22 158 SUPERFAMILY SSF49373 11 57 6.67E-5 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS14670 f359536ed96a4e197243b9afe9f82a22 158 SUPERFAMILY SSF49373 64 152 1.57E-24 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS14670 f359536ed96a4e197243b9afe9f82a22 158 Gene3D G3DSA:2.60.40.1380 46 152 8.8E-5 T 29-03-2018 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 SMART SM00316 649 720 1.0E-26 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.6E-28 T 29-03-2018 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 SMART SM00732 327 424 1.0E-34 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 SUPERFAMILY SSF47781 560 632 5.56E-20 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Pfam PF00575 S1 RNA binding domain 649 720 4.3E-24 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Gene3D G3DSA:1.10.150.310 499 630 6.1E-45 T 29-03-2018 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 SUPERFAMILY SSF158832 2 322 1.14E-121 T 29-03-2018 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 SUPERFAMILY SSF53098 323 469 9.36E-49 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 SUPERFAMILY SSF47781 470 558 5.0E-28 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Gene3D G3DSA:1.10.3500.10 103 359 9.1E-78 T 29-03-2018 IPR023323 Tex-like domain AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Gene3D G3DSA:1.10.3500.10 360 498 4.8E-39 T 29-03-2018 IPR023323 Tex-like domain AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Pfam PF16921 Tex protein YqgF-like domain 328 451 1.7E-50 T 29-03-2018 IPR032639 Tex protein, YqgF-like domain AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Pfam PF09371 Tex-like protein N-terminal domain 10 194 8.7E-70 T 29-03-2018 IPR018974 Tex-like protein, N-terminal AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Gene3D G3DSA:1.10.10.650 3 102 8.2E-34 T 29-03-2018 IPR023319 Tex-like protein, HTH domain AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 Gene3D G3DSA:2.40.50.140 643 725 8.0E-26 T 29-03-2018 AM460_RS06370 3e53b8540509f75add0dc5779091dc0f 773 SUPERFAMILY SSF50249 638 723 3.36E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS11205 ef1c07e13422e691166994cf94452f0d 128 Gene3D G3DSA:1.20.140.10 3 123 9.3E-4 T 29-03-2018 AM460_RS11205 ef1c07e13422e691166994cf94452f0d 128 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 128 2.5E-57 T 29-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail AM460_RS11205 ef1c07e13422e691166994cf94452f0d 128 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 114 3.6E-39 T 29-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail AM460_RS18280 14303662561815729cd506cb95d39cd6 324 SUPERFAMILY SSF46785 1 85 3.16E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18280 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:3.40.190.10 181 253 1.4E-24 T 29-03-2018 AM460_RS18280 14303662561815729cd506cb95d39cd6 324 SUPERFAMILY SSF53850 91 322 1.47E-46 T 29-03-2018 AM460_RS18280 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:3.40.190.10 91 180 6.9E-21 T 29-03-2018 AM460_RS18280 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:3.40.190.10 254 324 0.012 T 29-03-2018 AM460_RS18280 14303662561815729cd506cb95d39cd6 324 Pfam PF03466 LysR substrate binding domain 92 292 8.8E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS18280 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS18280 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS18280 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS18280 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:1.10.10.10 1 85 4.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18280 14303662561815729cd506cb95d39cd6 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.6E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS16565 ce42ced54db9f9974554b5842f85f083 531 SMART SM00882 15 253 9.1E-50 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS16565 ce42ced54db9f9974554b5842f85f083 531 PIRSF PIRSF000858 10 530 1.0E-207 T 29-03-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 AM460_RS16565 ce42ced54db9f9974554b5842f85f083 531 Gene3D G3DSA:3.40.1080.10 8 276 9.0E-66 T 29-03-2018 AM460_RS16565 ce42ced54db9f9974554b5842f85f083 531 Gene3D G3DSA:3.40.1080.10 283 531 9.0E-53 T 29-03-2018 AM460_RS16565 ce42ced54db9f9974554b5842f85f083 531 Pfam PF01144 Coenzyme A transferase 16 252 3.3E-57 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS16565 ce42ced54db9f9974554b5842f85f083 531 SUPERFAMILY SSF100950 284 523 3.48E-67 T 29-03-2018 AM460_RS16565 ce42ced54db9f9974554b5842f85f083 531 SUPERFAMILY SSF100950 15 264 1.05E-80 T 29-03-2018 AM460_RS08780 a02b305baf216a1b3fe0416f5ade5ba8 246 SUPERFAMILY SSF53448 4 244 1.37E-62 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS08780 a02b305baf216a1b3fe0416f5ade5ba8 246 Gene3D G3DSA:3.90.550.10 2 243 3.4E-48 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS08780 a02b305baf216a1b3fe0416f5ade5ba8 246 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 5 231 1.5E-63 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM460_RS08780 a02b305baf216a1b3fe0416f5ade5ba8 246 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 239 40.541 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM460_RS08780 a02b305baf216a1b3fe0416f5ade5ba8 246 Pfam PF02348 Cytidylyltransferase 5 212 6.5E-53 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AM460_RS23520 dded0429057843b7ee1e3ee70dc916e4 206 Gene3D G3DSA:2.40.50.140 36 192 4.0E-4 T 29-03-2018 AM460_RS23520 dded0429057843b7ee1e3ee70dc916e4 206 SUPERFAMILY SSF141318 40 189 1.96E-15 T 29-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein AM460_RS23520 dded0429057843b7ee1e3ee70dc916e4 206 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 8 200 7.2E-51 T 29-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.40.50.720 309 404 2.5E-17 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 SUPERFAMILY SSF54862 180 274 2.72E-41 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 SUPERFAMILY SSF54862 1 153 2.72E-41 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 92 121 1.7E-9 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 1 21 0.34 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Pfam PF13247 4Fe-4S dicluster domain 53 137 2.8E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 122 158 0.017 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.50.50.60 405 466 5.4E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.50.50.60 467 639 2.6E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 188 298 3.7E-36 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 454 468 8.2E-36 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 488 501 8.2E-36 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 377 387 8.2E-36 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 312 334 8.2E-36 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 335 348 8.2E-36 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 312 623 2.0E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 61 91 7.6E-10 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:1.10.1060.10 159 308 1.9E-36 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 171 635 3.8E-256 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 22 60 2.3E-7 T 29-03-2018 AM460_RS09755 ae4ac8c5363502a10cc280934938b958 639 SUPERFAMILY SSF51971 311 565 2.65E-64 T 29-03-2018 AM460_RS25340 0e0e62f99002b7a4405bd8c7e828c4a2 236 Pfam PF04170 NlpE N-terminal domain 45 129 9.4E-27 T 29-03-2018 IPR007298 Copper resistance lipoprotein NlpE AM460_RS25340 0e0e62f99002b7a4405bd8c7e828c4a2 236 Pfam PF17185 NlpE C-terminal OB domain 144 232 3.1E-33 T 29-03-2018 IPR033450 NlpE, C-terminal OB domain AM460_RS09455 9c150639111f4c9759b73900a3d4ac80 243 Gene3D G3DSA:3.40.190.10 1 240 1.0E-4 T 29-03-2018 AM460_RS25935 80169ac40b04644e64f19b23f346f32f 414 Pfam PF01098 Cell cycle protein 47 402 4.2E-131 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AM460_RS25935 80169ac40b04644e64f19b23f346f32f 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 45 400 1.6E-134 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM460_RS25935 80169ac40b04644e64f19b23f346f32f 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM460_RS25935 80169ac40b04644e64f19b23f346f32f 414 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 43 410 42.309 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM460_RS08465 2ba492a37fcff173325be7075207ccc7 336 Gene3D G3DSA:3.30.1370.60 81 307 2.8E-78 T 29-03-2018 AM460_RS08465 2ba492a37fcff173325be7075207ccc7 336 SUPERFAMILY SSF89733 4 335 2.49E-103 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS08465 2ba492a37fcff173325be7075207ccc7 336 Pfam PF02615 Malate/L-lactate dehydrogenase 6 333 1.6E-107 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS08465 2ba492a37fcff173325be7075207ccc7 336 Gene3D G3DSA:1.10.1530.10 4 80 3.4E-23 T 29-03-2018 AM460_RS00280 10b3075b9faa0b94d795a8a7571829e3 294 Pfam PF06995 Phage P2 GpU 6 123 2.2E-33 T 29-03-2018 IPR009734 Myoviridae, GpU AM460_RS21200 10b3075b9faa0b94d795a8a7571829e3 294 Pfam PF06995 Phage P2 GpU 6 123 2.2E-33 T 29-03-2018 IPR009734 Myoviridae, GpU AM460_RS20200 f6ee1b3e1fe1209c04e43a2c3b5a1a0d 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 7.4E-50 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM460_RS20200 f6ee1b3e1fe1209c04e43a2c3b5a1a0d 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM460_RS20200 f6ee1b3e1fe1209c04e43a2c3b5a1a0d 138 PIRSF PIRSF002889 1 137 1.2E-44 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM460_RS20200 f6ee1b3e1fe1209c04e43a2c3b5a1a0d 138 Pfam PF00460 Flagella basal body rod protein 9 39 2.3E-12 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM460_RS07445 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.9E-120 T 29-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AM460_RS07445 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.0E-7 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM460_RS07445 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Gene3D G3DSA:3.40.50.300 1 236 3.2E-64 T 29-03-2018 AM460_RS07445 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SUPERFAMILY SSF52540 4 236 1.13E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07445 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF00005 ABC transporter 20 166 7.3E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS07445 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SMART SM00382 28 213 5.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS07445 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 3.3E-10 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 4.5E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.6E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.7E-21 T 29-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Gene3D G3DSA:2.160.10.10 206 341 7.9E-23 T 29-03-2018 AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.857 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.2E-131 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Gene3D G3DSA:2.160.10.10 23 145 1.1E-19 T 29-03-2018 AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.23 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 SUPERFAMILY SSF51161 32 316 9.29E-87 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS25410 c8bf2234caa71a5e1101193ea1efb001 341 Gene3D G3DSA:2.160.10.10 146 205 9.3E-15 T 29-03-2018 AM460_RS27060 da5abbed4fefd01befe5944ca4cef6c4 116 ProDom PD027414 PLASMID TRBD ORFJ 12 72 6.0E-28 T 29-03-2018 IPR024396 Conjugal transfer protein TrbD, putative AM460_RS27060 da5abbed4fefd01befe5944ca4cef6c4 116 Pfam PF10894 Protein of unknown function (DUF2689) 10 63 1.1E-10 T 29-03-2018 IPR024396 Conjugal transfer protein TrbD, putative AM460_RS11885 990de095326f6804dc3e485f0f4ce174 179 ProDom PD095266 MEMBRANE YFGI EXPORTED 1 179 3.0E-80 T 29-03-2018 IPR020231 Uncharacterised protein family, YfgI AM460_RS11885 990de095326f6804dc3e485f0f4ce174 179 Pfam PF17358 Family of unknown function (DUF5384) 36 178 2.6E-56 T 29-03-2018 IPR020231 Uncharacterised protein family, YfgI AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 500 624 4.1E-46 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 Gene3D G3DSA:3.30.1360.60 390 466 8.4E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 563 575 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 452 1.8E-26 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 Pfam PF02378 Phosphotransferase system, EIIC 12 300 4.9E-75 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 SUPERFAMILY SSF51261 497 646 7.5E-50 T 29-03-2018 IPR011055 Duplicated hybrid motif AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 Gene3D G3DSA:2.70.70.10 490 648 4.9E-53 T 29-03-2018 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 SUPERFAMILY SSF55604 392 465 4.32E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 463 3.2E-215 T 29-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 501 621 6.7E-47 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS23000 c05eacde9d50849b5f9914eb4878bff7 648 Pfam PF00367 phosphotransferase system, EIIB 396 427 1.0E-11 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS00940 ab2b7eb6f535f0dcf62bd7689be63677 691 Pfam PF07728 AAA domain (dynein-related subfamily) 392 522 8.6E-11 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM460_RS00940 ab2b7eb6f535f0dcf62bd7689be63677 691 SMART SM00382 237 532 3.4E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00940 ab2b7eb6f535f0dcf62bd7689be63677 691 SUPERFAMILY SSF52540 436 533 5.5E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00940 ab2b7eb6f535f0dcf62bd7689be63677 691 SUPERFAMILY SSF52540 232 305 5.5E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00940 ab2b7eb6f535f0dcf62bd7689be63677 691 Gene3D G3DSA:3.40.50.300 244 529 3.0E-20 T 29-03-2018 AM460_RS00940 ab2b7eb6f535f0dcf62bd7689be63677 691 Gene3D G3DSA:3.40.50.300 172 243 0.0092 T 29-03-2018 AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 Gene3D G3DSA:3.55.40.10 33 164 1.2E-29 T 29-03-2018 AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 141 2.2E-18 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 122 137 1.6E-20 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 1.6E-20 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 1.6E-20 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.8E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 SUPERFAMILY SSF54523 7 124 6.04E-13 T 29-03-2018 AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 3.1E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06775 840eb4c3503017992339bf70d8eeeb11 169 Pfam PF12019 Type II transport protein GspH 44 146 1.6E-9 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 Pfam PF02384 N-6 DNA Methylase 180 498 5.2E-59 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 SUPERFAMILY SSF53335 9 49 1.4E-96 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 SUPERFAMILY SSF53335 87 544 1.4E-96 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 351 375 1.6E-20 T 29-03-2018 AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 232 246 1.6E-20 T 29-03-2018 AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 306 318 1.6E-20 T 29-03-2018 AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 1.6E-20 T 29-03-2018 AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 309 315 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS25030 21238797eef24bb9516ee00b6bdd6e76 545 Gene3D G3DSA:3.40.50.150 200 496 1.8E-50 T 29-03-2018 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Gene3D G3DSA:1.10.10.10 404 524 1.8E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 SUPERFAMILY SSF52540 7 201 3.68E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Pfam PF00270 DEAD/DEAH box helicase 28 187 9.7E-20 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 601 8.0E-281 T 29-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 SUPERFAMILY SSF52540 208 456 1.83E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Pfam PF16124 RecQ zinc-binding 343 404 1.2E-15 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 SMART SM00490 250 331 8.1E-29 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 SMART SM00487 22 216 4.0E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Pfam PF00570 HRDC domain 533 599 3.4E-23 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Gene3D G3DSA:1.10.150.80 525 609 1.4E-26 T 29-03-2018 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Pfam PF09382 RQC domain 406 514 5.7E-35 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Gene3D G3DSA:3.40.50.300 1 208 1.6E-38 T 29-03-2018 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 2.4E-209 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 SMART SM00956 411 514 4.9E-48 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 SUPERFAMILY SSF47819 530 605 3.27E-26 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Gene3D G3DSA:3.40.50.300 210 403 9.8E-50 T 29-03-2018 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 SMART SM00341 529 609 1.9E-31 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM460_RS04065 652e4c559be7d66a603ad0b6d479c2c7 609 Pfam PF00271 Helicase conserved C-terminal domain 222 330 2.4E-21 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 8 308 1.0E-179 T 29-03-2018 IPR011781 D-serine deaminase transcriptional activator AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 Pfam PF03466 LysR substrate binding domain 99 307 2.5E-30 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 Gene3D G3DSA:3.40.190.10 103 183 5.4E-12 T 29-03-2018 AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 Gene3D G3DSA:3.40.190.10 184 277 9.9E-20 T 29-03-2018 AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 SUPERFAMILY SSF46785 17 123 2.62E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 2.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 SUPERFAMILY SSF53850 99 308 4.89E-32 T 29-03-2018 AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 4.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 4.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 4.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12515 db521a9bd0ff455ab02ca36dfa6bc781 311 Gene3D G3DSA:1.10.10.10 4 100 1.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25250 69504a87252601fdbdb1ca1c7035870d 256 SUPERFAMILY SSF53335 11 242 9.51E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS25250 69504a87252601fdbdb1ca1c7035870d 256 Pfam PF08241 Methyltransferase domain 49 145 3.1E-26 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM460_RS25250 69504a87252601fdbdb1ca1c7035870d 256 Gene3D G3DSA:3.40.50.150 25 255 1.5E-39 T 29-03-2018 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 SUPERFAMILY SSF53822 10 298 7.79E-46 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 SUPERFAMILY SSF46689 284 333 3.86E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:3.40.50.2300 107 280 5.1E-31 T 29-03-2018 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:1.10.10.60 281 339 1.6E-8 T 29-03-2018 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 6.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 6.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 Pfam PF12833 Helix-turn-helix domain 309 384 2.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:1.10.10.60 340 386 5.5E-12 T 29-03-2018 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:3.40.50.2300 1 106 6.4E-11 T 29-03-2018 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 2.0E-37 T 29-03-2018 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 SUPERFAMILY SSF46689 338 385 3.12E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS05410 00a82d6c6e0d7f1ab456ff684a37cabf 392 SMART SM00342 301 384 1.2E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PRINTS PR00073 Coprogen oxidase signature 123 145 1.4E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PRINTS PR00073 Coprogen oxidase signature 160 189 1.4E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PRINTS PR00073 Coprogen oxidase signature 260 286 1.4E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PRINTS PR00073 Coprogen oxidase signature 29 45 1.4E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PRINTS PR00073 Coprogen oxidase signature 232 259 1.4E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PRINTS PR00073 Coprogen oxidase signature 46 67 1.4E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PRINTS PR00073 Coprogen oxidase signature 88 112 1.4E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 59.353 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 Pfam PF01218 Coproporphyrinogen III oxidase 8 299 1.2E-133 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 29-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 SUPERFAMILY SSF102886 3 299 3.53E-139 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 Gene3D G3DSA:3.40.1500.10 1 299 5.3E-141 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS12160 01cc45cb0513e2a8356ad7c206119919 299 PIRSF PIRSF000166 2 299 1.3E-129 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM460_RS18825 3a5c6542977aa5a2ec1cb303d69f3d5b 337 Pfam PF00005 ABC transporter 40 196 5.8E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS18825 3a5c6542977aa5a2ec1cb303d69f3d5b 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 2.2E-20 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS18825 3a5c6542977aa5a2ec1cb303d69f3d5b 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS18825 3a5c6542977aa5a2ec1cb303d69f3d5b 337 SUPERFAMILY SSF52540 49 316 2.66E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18825 3a5c6542977aa5a2ec1cb303d69f3d5b 337 Gene3D G3DSA:3.40.50.300 16 335 3.2E-74 T 29-03-2018 AM460_RS18825 3a5c6542977aa5a2ec1cb303d69f3d5b 337 SMART SM00382 48 254 2.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS18825 3a5c6542977aa5a2ec1cb303d69f3d5b 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 6.0E-25 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS01655 70d716e72e21ffc79d5aeaf73bac2f60 206 SUPERFAMILY SSF54534 8 205 2.95E-56 T 29-03-2018 AM460_RS01655 70d716e72e21ffc79d5aeaf73bac2f60 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.7E-28 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM460_RS01655 70d716e72e21ffc79d5aeaf73bac2f60 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 6.7E-23 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM460_RS01655 70d716e72e21ffc79d5aeaf73bac2f60 206 Gene3D G3DSA:3.10.50.40 90 206 4.2E-42 T 29-03-2018 AM460_RS01655 70d716e72e21ffc79d5aeaf73bac2f60 206 Gene3D G3DSA:1.10.287.460 1 89 7.4E-20 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 48 260 5.6E-23 T 29-03-2018 IPR000477 Reverse transcriptase domain AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 Gene3D G3DSA:3.30.70.270 73 261 1.1E-17 T 29-03-2018 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 SUPERFAMILY SSF56672 32 255 4.78E-7 T 29-03-2018 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 256 262 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 43 56 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 162 175 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 96 110 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 131 141 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 180 193 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 195 206 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 112 130 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS19230 35656e5e3c5a5c1e0d778e0a3ee61c89 585 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 57 69 7.1E-40 T 29-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 Gene3D G3DSA:3.40.50.1000 76 206 4.5E-28 T 29-03-2018 IPR023214 HAD-like domain AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 163 8.9E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 181 3.3E-21 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 SUPERFAMILY SSF56784 4 203 2.59E-47 T 29-03-2018 IPR023214 HAD-like domain AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 Gene3D G3DSA:3.40.50.1000 1 27 0.075 T 29-03-2018 IPR023214 HAD-like domain AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.6E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 3.6E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 3.6E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 3.6E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 Gene3D G3DSA:1.10.150.240 28 75 1.0E-18 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS12870 88a0b6c35c13df5c477a6c7f7b625cb9 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 9.5E-27 T 29-03-2018 IPR023214 HAD-like domain AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 SMART SM00922 130 223 2.7E-18 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 Pfam PF13378 Enolase C-terminal domain-like 133 318 7.1E-26 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 87 112 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 SUPERFAMILY SSF54826 3 112 7.07E-33 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 Gene3D G3DSA:3.20.20.120 116 321 3.8E-40 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 Gene3D G3DSA:3.30.390.10 1 115 1.2E-27 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 1 112 5.4E-32 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM460_RS18010 b3b77d2fb34afcfb671d306233f7c80c 321 SUPERFAMILY SSF51604 116 310 1.03E-51 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 Gene3D G3DSA:1.20.120.530 84 229 2.6E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 SUPERFAMILY SSF48008 98 227 8.89E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 SUPERFAMILY SSF46785 4 72 3.98E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 SMART SM00895 97 220 1.8E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 Pfam PF07729 FCD domain 99 218 3.8E-25 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.9E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.9E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 4.8E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 SMART SM00345 9 68 1.3E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS04730 763f7017b7dc4d72eba1fdff27ead134 229 Gene3D G3DSA:1.10.10.10 2 70 1.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF01479 S4 domain 97 143 7.3E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:1.10.1050.10 1 101 2.4E-41 T 29-03-2018 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 29-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.7E-32 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:1.10.1050.10 145 206 4.2E-18 T 29-03-2018 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.4E-87 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM01390 3 95 1.3E-49 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM00363 96 160 8.2E-21 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 SUPERFAMILY SSF55174 3 206 1.96E-73 T 29-03-2018 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.44 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM460_RS06940 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:3.10.290.10 102 144 1.3E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS22200 50562d25dfb5405013393f0522bf2a77 810 Gene3D G3DSA:3.20.70.20 9 810 1.0E-277 T 29-03-2018 AM460_RS22200 50562d25dfb5405013393f0522bf2a77 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM460_RS22200 50562d25dfb5405013393f0522bf2a77 810 PIRSF PIRSF000379 55 810 1.6E-199 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM460_RS22200 50562d25dfb5405013393f0522bf2a77 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 1.8E-213 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM460_RS22200 50562d25dfb5405013393f0522bf2a77 810 SUPERFAMILY SSF51998 7 808 4.88E-233 T 29-03-2018 AM460_RS22200 50562d25dfb5405013393f0522bf2a77 810 Pfam PF01228 Glycine radical 688 791 7.9E-30 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM460_RS22200 50562d25dfb5405013393f0522bf2a77 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM460_RS15975 7846fbc3828b5713ad7b95854ca8aeeb 193 PIRSF PIRSF004982 5 189 8.9E-59 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM460_RS15975 7846fbc3828b5713ad7b95854ca8aeeb 193 Pfam PF03843 Outer membrane lipoprotein Slp family 20 167 4.2E-49 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM460_RS15975 7846fbc3828b5713ad7b95854ca8aeeb 193 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 189 8.3E-89 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 Gene3D G3DSA:3.20.130.10 359 536 2.9E-68 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 SUPERFAMILY SSF117457 361 536 1.44E-61 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 PIRSF PIRSF001394 30 548 5.2E-236 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 1.4E-33 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 Pfam PF05683 Fumarase C-terminus 332 537 8.0E-93 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 9.3E-66 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS02210 70ab1413ffe4412ac30ff1b93618753d 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 1.9E-88 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 SUPERFAMILY SSF52540 1 240 1.2E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 SUPERFAMILY SSF55021 248 343 1.49E-26 T 29-03-2018 AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 Gene3D G3DSA:3.30.70.260 253 343 1.6E-25 T 29-03-2018 AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 SMART SM00382 30 218 2.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 Pfam PF00005 ABC transporter 21 169 5.7E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.4E-212 T 29-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 SMART SM00930 265 340 9.8E-25 T 29-03-2018 IPR018449 NIL domain AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 Gene3D G3DSA:3.40.50.300 1 252 5.9E-78 T 29-03-2018 AM460_RS25305 f475495f01e3e555d3e1655f94c8fe13 343 Pfam PF09383 NIL domain 268 339 3.4E-20 T 29-03-2018 IPR018449 NIL domain AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 SMART SM00420 8 60 3.5E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 Pfam PF08220 DeoR-like helix-turn-helix domain 8 60 3.4E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 Gene3D G3DSA:1.10.10.10 3 74 3.6E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 Pfam PF00455 DeoR C terminal sensor domain 85 238 3.3E-51 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 SMART SM01134 80 240 1.3E-66 T 29-03-2018 AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 SUPERFAMILY SSF46785 7 63 1.35E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 5.6E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 5.6E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 Gene3D G3DSA:3.40.50.1360 81 246 5.0E-41 T 29-03-2018 AM460_RS13940 52a3c0339750571b7cac3246c223d785 259 SUPERFAMILY SSF100950 83 245 6.88E-34 T 29-03-2018 AM460_RS18160 5b86580b2e5935cabca91c91c0a12f7b 268 Pfam PF00005 ABC transporter 31 178 1.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS18160 5b86580b2e5935cabca91c91c0a12f7b 268 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS18160 5b86580b2e5935cabca91c91c0a12f7b 268 Gene3D G3DSA:3.40.50.300 2 257 4.4E-67 T 29-03-2018 AM460_RS18160 5b86580b2e5935cabca91c91c0a12f7b 268 SMART SM00382 39 228 2.1E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS18160 5b86580b2e5935cabca91c91c0a12f7b 268 SUPERFAMILY SSF52540 5 251 2.51E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 PIRSF PIRSF006294 3 540 2.5E-234 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 SUPERFAMILY SSF68923 9 227 1.71E-91 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 Gene3D G3DSA:3.40.449.10 23 227 7.1E-79 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 Gene3D G3DSA:3.90.228.20 308 538 2.9E-94 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 Gene3D G3DSA:3.90.228.20 228 307 6.0E-29 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 491 2.3E-212 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 540 5.9E-299 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 SUPERFAMILY SSF53795 229 540 4.84E-131 T 29-03-2018 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 29-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM460_RS06395 67322d9efd747328ae1f0f9c34caf12f 540 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 16 538 56.517 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 SUPERFAMILY SSF55594 4 90 3.66E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 3.3E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.3E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.3E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 5.8E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 2.6E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 Gene3D G3DSA:3.30.1340.10 1 89 3.2E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM460_RS07420 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM460_RS23610 dd5188361484b304518565854977f867 460 SUPERFAMILY SSF56954 4 459 1.83E-103 T 29-03-2018 AM460_RS23610 dd5188361484b304518565854977f867 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 457 2.1E-112 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM460_RS23610 dd5188361484b304518565854977f867 460 Pfam PF02321 Outer membrane efflux protein 64 247 6.9E-22 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS23610 dd5188361484b304518565854977f867 460 Pfam PF02321 Outer membrane efflux protein 274 455 2.3E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS23610 dd5188361484b304518565854977f867 460 Gene3D G3DSA:1.20.1600.10 18 460 1.9E-91 T 29-03-2018 AM460_RS23340 e12fa98a49523be028e9ff30aee67f2c 136 PIRSF PIRSF006092 30 128 2.1E-23 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM460_RS23340 e12fa98a49523be028e9ff30aee67f2c 136 SUPERFAMILY SSF54534 49 127 1.96E-18 T 29-03-2018 AM460_RS23340 e12fa98a49523be028e9ff30aee67f2c 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 1.5E-20 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM460_RS23340 e12fa98a49523be028e9ff30aee67f2c 136 Gene3D G3DSA:3.10.50.30 45 135 1.7E-23 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM460_RS23340 e12fa98a49523be028e9ff30aee67f2c 136 Pfam PF14760 Rnk N-terminus 4 42 3.7E-10 T 29-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AM460_RS23340 e12fa98a49523be028e9ff30aee67f2c 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.797 T 29-03-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 AM460_RS23340 e12fa98a49523be028e9ff30aee67f2c 136 Gene3D G3DSA:1.10.286.20 3 43 1.2E-11 T 29-03-2018 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.71 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 Gene3D G3DSA:3.90.1150.10 343 442 1.3E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 Gene3D G3DSA:3.40.640.10 530 774 4.1E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 SUPERFAMILY SSF53383 929 951 1.69E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 SUPERFAMILY SSF53383 480 889 1.69E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 Gene3D G3DSA:3.40.640.10 96 342 2.1E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 SUPERFAMILY SSF53383 17 440 4.72E-95 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 Gene3D G3DSA:3.90.1150.10 775 906 5.8E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 Pfam PF02347 Glycine cleavage system P-protein 481 739 1.2E-8 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 2.5E-193 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM460_RS09670 cc9c671900d2ef8abf91a2b86e2226f2 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF02151 UvrB/uvrC motif 634 667 1.7E-6 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 10 408 2.2E-33 T 29-03-2018 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.417 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 2.4E-9 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.2E-21 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 415 589 2.4E-32 T 29-03-2018 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF46600 624 669 1.31E-11 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 3 415 3.0E-139 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 SMART SM00490 460 546 3.8E-20 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF00271 Helicase conserved C-terminal domain 436 544 2.4E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 459 581 1.07E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 37 82 1.07E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:4.10.860.10 604 673 1.7E-16 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM460_RS22425 ec0a6df625d8492ad92d6b933cb6f65f 673 SMART SM00487 9 425 6.3E-28 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 SMART SM00062 22 242 2.2E-88 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 SUPERFAMILY SSF53850 1 242 1.03E-73 T 29-03-2018 AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 1.1E-90 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 133 243 6.3E-22 T 29-03-2018 AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 7.8E-71 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 SMART SM00079 22 243 4.2E-4 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM460_RS22000 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 12 132 1.3E-38 T 29-03-2018 AM460_RS02735 f43a4d138237b8cf20b52565af0867be 678 SUPERFAMILY SSF51905 437 512 6.91E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS02735 f43a4d138237b8cf20b52565af0867be 678 SUPERFAMILY SSF51905 40 272 6.91E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS02735 f43a4d138237b8cf20b52565af0867be 678 Gene3D G3DSA:3.50.50.60 39 518 1.3E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS02735 f43a4d138237b8cf20b52565af0867be 678 Pfam PF00890 FAD binding domain 42 471 5.0E-20 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS02735 f43a4d138237b8cf20b52565af0867be 678 Gene3D G3DSA:1.20.58.100 519 599 3.2E-6 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS02735 f43a4d138237b8cf20b52565af0867be 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 41 60 2.6E-6 T 29-03-2018 AM460_RS02735 f43a4d138237b8cf20b52565af0867be 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 436 458 2.6E-6 T 29-03-2018 AM460_RS17520 68679df3fd1cae33b0ab4da2d06b69c9 217 Pfam PF01292 Prokaryotic cytochrome b561 13 186 2.5E-18 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM460_RS17520 68679df3fd1cae33b0ab4da2d06b69c9 217 SUPERFAMILY SSF81342 3 212 2.82E-54 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM460_RS17520 68679df3fd1cae33b0ab4da2d06b69c9 217 Gene3D G3DSA:1.20.950.20 1 217 9.8E-56 T 29-03-2018 AM460_RS17520 68679df3fd1cae33b0ab4da2d06b69c9 217 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 5.1E-69 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AM460_RS00200 ec9d968bc40d42032cb52ebca1d57d5c 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00200 ec9d968bc40d42032cb52ebca1d57d5c 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.534 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM460_RS00200 ec9d968bc40d42032cb52ebca1d57d5c 239 Gene3D G3DSA:3.40.50.1580 9 235 1.9E-56 T 29-03-2018 AM460_RS00200 ec9d968bc40d42032cb52ebca1d57d5c 239 SUPERFAMILY SSF53167 3 234 2.36E-94 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS00200 ec9d968bc40d42032cb52ebca1d57d5c 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 5.1E-128 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM460_RS00200 ec9d968bc40d42032cb52ebca1d57d5c 239 Pfam PF01048 Phosphorylase superfamily 15 218 2.2E-39 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF53067 13 133 1.3E-35 T 29-03-2018 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF109604 313 507 1.78E-58 T 29-03-2018 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF53067 137 310 1.3E-47 T 29-03-2018 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 Gene3D G3DSA:3.30.420.40 1 124 3.6E-36 T 29-03-2018 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 3.9E-96 T 29-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 PIRSF PIRSF001267 3 506 1.2E-204 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 Gene3D G3DSA:3.30.420.150 125 305 8.2E-35 T 29-03-2018 AM460_RS11915 2421f9ce637269efdde42df52115e903 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 5.4E-105 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 SMART SM00387 494 602 9.2E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 Pfam PF02743 Cache domain 49 223 1.0E-14 T 29-03-2018 IPR033479 Double Cache domain 1 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 PIRSF PIRSF036431 1 606 4.5E-214 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 SUPERFAMILY SSF103190 67 192 5.3E-22 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 5.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 5.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 5.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 5.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 Pfam PF00512 His Kinase A (phospho-acceptor) domain 384 448 2.2E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 Gene3D G3DSA:3.30.450.20 61 167 1.4E-22 T 29-03-2018 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 Gene3D G3DSA:3.30.565.10 452 606 1.1E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 Gene3D G3DSA:3.30.450.20 168 295 2.2E-8 T 29-03-2018 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 SUPERFAMILY SSF55874 439 600 1.01E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 SUPERFAMILY SSF47384 380 447 8.24E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 599 1.2E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02645 047dd1df3f2d1f6f27ccf8859dbc2b2a 606 Gene3D G3DSA:1.10.287.130 372 447 3.4E-8 T 29-03-2018 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 1.8E-82 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 1.8E-82 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 1.8E-82 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 1.8E-82 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 1.8E-82 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 1.8E-82 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 1.8E-82 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 Pfam PF02050 Flagellar FliJ protein 19 141 1.0E-34 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 PIRSF PIRSF019404 1 147 6.6E-52 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM460_RS14930 85bd5ad895f495dbece885dcfbf13b5d 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 3.1E-31 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM460_RS13495 84e5b9a21f5902be1943357c5f27fc27 393 Gene3D G3DSA:1.20.1250.20 14 202 2.3E-19 T 29-03-2018 AM460_RS13495 84e5b9a21f5902be1943357c5f27fc27 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 9.3E-198 T 29-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 AM460_RS13495 84e5b9a21f5902be1943357c5f27fc27 393 Pfam PF07690 Major Facilitator Superfamily 21 356 6.3E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS13495 84e5b9a21f5902be1943357c5f27fc27 393 Gene3D G3DSA:1.20.1250.20 209 392 8.2E-25 T 29-03-2018 AM460_RS13495 84e5b9a21f5902be1943357c5f27fc27 393 SUPERFAMILY SSF103473 19 390 8.89E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS09850 05ea549803f89949e0097a1ced326318 292 SMART SM01092 181 283 1.7E-25 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM460_RS09850 05ea549803f89949e0097a1ced326318 292 Gene3D G3DSA:3.30.465.10 57 174 3.7E-32 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS09850 05ea549803f89949e0097a1ced326318 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 173 1.3E-50 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AM460_RS09850 05ea549803f89949e0097a1ced326318 292 Gene3D G3DSA:3.30.390.50 177 292 1.2E-25 T 29-03-2018 AM460_RS09850 05ea549803f89949e0097a1ced326318 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 283 4.4E-24 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM460_RS09850 05ea549803f89949e0097a1ced326318 292 SUPERFAMILY SSF56176 6 173 3.36E-51 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS09850 05ea549803f89949e0097a1ced326318 292 Gene3D G3DSA:3.30.43.10 4 56 3.3E-14 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM460_RS09850 05ea549803f89949e0097a1ced326318 292 SUPERFAMILY SSF55447 181 284 5.23E-25 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM460_RS08315 9cf496c4b62bdd977ca986e7a4a0133d 386 SUPERFAMILY SSF52440 174 279 3.16E-39 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS08315 9cf496c4b62bdd977ca986e7a4a0133d 386 SUPERFAMILY SSF56059 1 168 1.41E-95 T 29-03-2018 AM460_RS08315 9cf496c4b62bdd977ca986e7a4a0133d 386 SUPERFAMILY SSF56059 266 383 1.41E-95 T 29-03-2018 AM460_RS08315 9cf496c4b62bdd977ca986e7a4a0133d 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 5.7E-162 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM460_RS18480 3764329b39fd7b6ffb7938b82af0150b 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 11 230 3.4E-112 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM460_RS18480 3764329b39fd7b6ffb7938b82af0150b 232 Pfam PF05100 Phage minor tail protein L 31 230 1.7E-91 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 SUPERFAMILY SSF116726 231 292 2.62E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 Pfam PF02080 TrkA-C domain 326 390 1.3E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 Pfam PF02080 TrkA-C domain 231 304 6.7E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 Gene3D G3DSA:3.30.70.1450 217 306 2.7E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 Gene3D G3DSA:3.30.70.1450 323 397 1.7E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 SUPERFAMILY SSF116726 321 391 7.19E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 Pfam PF03600 Citrate transporter 430 607 1.0E-20 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM460_RS12875 7ac7b51d57bc278c892b94b0f6cd8353 610 Pfam PF03600 Citrate transporter 16 198 2.5E-37 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM460_RS09010 fa1d277eea22f5208770227f5e5b935e 372 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 26 363 7.0E-144 T 29-03-2018 IPR019936 Mutatrotase, YjhT-like AM460_RS09010 fa1d277eea22f5208770227f5e5b935e 372 SUPERFAMILY SSF117281 195 360 4.05E-41 T 29-03-2018 AM460_RS09010 fa1d277eea22f5208770227f5e5b935e 372 SUPERFAMILY SSF117281 43 163 4.05E-41 T 29-03-2018 AM460_RS09010 fa1d277eea22f5208770227f5e5b935e 372 Pfam PF01344 Kelch motif 79 125 1.7E-8 T 29-03-2018 IPR006652 Kelch repeat type 1 GO:0005515 AM460_RS09010 fa1d277eea22f5208770227f5e5b935e 372 Gene3D G3DSA:2.120.10.80 20 165 1.2E-20 T 29-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AM460_RS09010 fa1d277eea22f5208770227f5e5b935e 372 Gene3D G3DSA:2.120.10.80 166 372 3.5E-21 T 29-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.3E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.3E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.3E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.3E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.3E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 Gene3D G3DSA:3.40.50.720 3 269 2.3E-51 T 29-03-2018 AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 SUPERFAMILY SSF51735 15 266 4.71E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 Pfam PF00106 short chain dehydrogenase 16 204 1.5E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS23855 3f85846fbea559d17958685fb557a2df 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 195 0.0024 T 29-03-2018 AM460_RS25540 1d8fc5933b66ae9d32e88acfcd1b3eba 660 Pfam PF01032 FecCD transport family 11 323 1.2E-63 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS25540 1d8fc5933b66ae9d32e88acfcd1b3eba 660 Pfam PF01032 FecCD transport family 359 657 6.8E-75 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS25540 1d8fc5933b66ae9d32e88acfcd1b3eba 660 Gene3D G3DSA:1.10.3470.10 341 660 4.4E-49 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS25540 1d8fc5933b66ae9d32e88acfcd1b3eba 660 Gene3D G3DSA:1.10.3470.10 1 331 6.2E-47 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS25540 1d8fc5933b66ae9d32e88acfcd1b3eba 660 SUPERFAMILY SSF81345 6 325 3.27E-59 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS25540 1d8fc5933b66ae9d32e88acfcd1b3eba 660 SUPERFAMILY SSF81345 345 657 4.71E-73 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 Pfam PF01131 DNA topoisomerase 158 593 8.6E-112 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 649 0.0 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 Gene3D G3DSA:1.10.460.10 157 360 8.1E-39 T 29-03-2018 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 Pfam PF01751 Toprim domain 3 135 1.3E-17 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 SMART SM00437 280 558 2.2E-108 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 645 70.573 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 SMART SM00493 1 124 2.9E-31 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 SUPERFAMILY SSF56712 1 607 6.02E-189 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 Gene3D G3DSA:2.70.20.10 364 482 1.9E-23 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 Gene3D G3DSA:3.40.50.140 1 156 1.2E-40 T 29-03-2018 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 SMART SM00436 128 223 3.8E-37 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM460_RS16195 9d3b3e40d86b54f1bf35cc38bef2a7c3 651 Gene3D G3DSA:1.10.460.10 483 614 5.9E-17 T 29-03-2018 AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 125 1.7E-8 T 29-03-2018 AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 54 68 1.7E-8 T 29-03-2018 AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 30 46 1.7E-8 T 29-03-2018 AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 125 149 1.7E-8 T 29-03-2018 AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 SUPERFAMILY SSF53335 32 186 8.37E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 Pfam PF05175 Methyltransferase small domain 45 149 4.8E-7 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM460_RS27610 f96f10ed2c97212523115655e2d4a960 187 Gene3D G3DSA:3.40.50.150 2 177 2.5E-24 T 29-03-2018 AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 Pfam PF00072 Response regulator receiver domain 3 112 1.7E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 SMART SM00448 1 112 1.4E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 Pfam PF04397 LytTr DNA-binding domain 146 242 5.5E-32 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 Gene3D G3DSA:2.20.25.10 206 243 6.2E-15 T 29-03-2018 AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 SUPERFAMILY SSF52172 2 162 2.13E-26 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 SMART SM00850 145 243 5.2E-36 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 Gene3D G3DSA:3.40.50.2300 1 137 5.0E-24 T 29-03-2018 AM460_RS12420 a1551d96082c2c1d8a26fd0931982a84 244 Gene3D G3DSA:2.40.50.40 138 205 4.5E-18 T 29-03-2018 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:1.10.10.60 129 181 1.9E-10 T 29-03-2018 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 SMART SM00857 3 139 1.2E-50 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 SUPERFAMILY SSF46689 141 181 2.62E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:1.20.5.40 108 128 5.4E-13 T 29-03-2018 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:3.40.50.1390 1 107 3.4E-36 T 29-03-2018 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 Pfam PF00239 Resolvase, N terminal domain 4 137 2.2E-40 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 SUPERFAMILY SSF53041 1 138 2.09E-42 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS27315 7749ed6794122ced08d811e75084cd69 185 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 8.5E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 Gene3D G3DSA:3.30.360.10 163 308 1.7E-48 T 29-03-2018 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 6.4E-32 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 SMART SM00859 3 146 1.7E-52 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 29-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 SUPERFAMILY SSF51735 1 170 6.02E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 7.1E-124 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 Gene3D G3DSA:3.40.50.720 1 162 5.0E-42 T 29-03-2018 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.998 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 SUPERFAMILY SSF55347 154 308 5.61E-49 T 29-03-2018 AM460_RS03280 217f8e38593bf9c9ecda46214a4fcc17 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 7.8E-20 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 184 201 2.8E-36 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 54 72 2.8E-36 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 29 50 2.8E-36 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 210 228 2.8E-36 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 233 250 2.8E-36 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 255 273 2.8E-36 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 73 92 2.8E-36 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 Gene3D G3DSA:3.40.50.1980 30 175 7.0E-45 T 29-03-2018 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 Gene3D G3DSA:3.40.50.1980 176 298 8.2E-30 T 29-03-2018 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 184 205 4.5E-42 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 29 47 4.5E-42 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 237 255 4.5E-42 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 73 90 4.5E-42 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 263 282 4.5E-42 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 60 73 4.5E-42 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 SUPERFAMILY SSF53807 25 298 8.34E-90 T 29-03-2018 AM460_RS19560 b8a41369de93c640c0341ac60bfefc99 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 2.5E-73 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 1.6E-33 T 29-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 SMART SM00052 395 635 2.2E-61 T 29-03-2018 IPR001633 EAL domain AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 SUPERFAMILY SSF141868 403 642 1.05E-35 T 29-03-2018 IPR001633 EAL domain AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 381 4.4E-12 T 29-03-2018 IPR000160 GGDEF domain AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 SMART SM00267 213 385 2.1E-42 T 29-03-2018 IPR000160 GGDEF domain AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 SUPERFAMILY SSF55073 230 387 2.51E-22 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 Gene3D G3DSA:3.30.70.270 218 388 6.9E-25 T 29-03-2018 AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 Gene3D G3DSA:3.20.20.450 389 645 5.5E-45 T 29-03-2018 IPR001633 EAL domain AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 Pfam PF00563 EAL domain 403 628 1.7E-37 T 29-03-2018 IPR001633 EAL domain AM460_RS07210 ce42fe3d9154dc89b73434b319d61ca3 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 4.6E-32 T 29-03-2018 IPR000160 GGDEF domain AM460_RS26140 c2210d043e878bcf1a7ad9616c807b6f 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.6E-131 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS26140 c2210d043e878bcf1a7ad9616c807b6f 329 SUPERFAMILY SSF53659 5 327 1.22E-116 T 29-03-2018 AM460_RS26140 c2210d043e878bcf1a7ad9616c807b6f 329 Gene3D G3DSA:3.40.718.10 1 329 6.1E-134 T 29-03-2018 AM460_RS26140 c2210d043e878bcf1a7ad9616c807b6f 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.437 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS26140 c2210d043e878bcf1a7ad9616c807b6f 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 4.5E-109 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.3E-18 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF46689 1 79 1.8E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 Gene3D G3DSA:1.10.10.60 4 58 2.8E-19 T 29-03-2018 AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 Gene3D G3DSA:1.10.357.10 59 196 5.2E-13 T 29-03-2018 AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS16990 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF48498 84 168 9.93E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS20625 ab52a56d701f4b8ec4f64047f13642de 70 SUPERFAMILY SSF50249 4 69 1.93E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20625 ab52a56d701f4b8ec4f64047f13642de 70 Gene3D G3DSA:2.40.50.140 3 70 1.1E-12 T 29-03-2018 AM460_RS20625 ab52a56d701f4b8ec4f64047f13642de 70 PIRSF PIRSF002599 1 70 6.9E-13 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM460_RS20625 ab52a56d701f4b8ec4f64047f13642de 70 SMART SM00357 6 70 5.3E-17 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS20625 ab52a56d701f4b8ec4f64047f13642de 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site AM460_RS20625 ab52a56d701f4b8ec4f64047f13642de 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.2E-22 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 SUPERFAMILY SSF50447 244 329 2.16E-22 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 SUPERFAMILY SSF50465 336 435 7.19E-30 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.858 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 Gene3D G3DSA:2.40.30.10 240 329 6.2E-21 T 29-03-2018 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 6.5E-213 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 6.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 6.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 6.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 6.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 6.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 Gene3D G3DSA:3.40.50.300 6 239 1.3E-38 T 29-03-2018 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 1.4E-42 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 SUPERFAMILY SSF52540 23 236 1.48E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 1.6E-13 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 Gene3D G3DSA:2.40.30.10 332 436 5.9E-19 T 29-03-2018 AM460_RS10500 7ab75683c1e89d1b1c3b83f51c488c9f 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS15055 3aa9f66428983748b027a855694b01fe 349 SUPERFAMILY SSF64518 1 348 1.57E-104 T 29-03-2018 AM460_RS15055 3aa9f66428983748b027a855694b01fe 349 Pfam PF00700 Bacterial flagellin C-terminal helical region 263 347 3.2E-30 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM460_RS15055 3aa9f66428983748b027a855694b01fe 349 PRINTS PR00207 Flagellin signature 76 95 8.0E-32 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM460_RS15055 3aa9f66428983748b027a855694b01fe 349 PRINTS PR00207 Flagellin signature 37 54 8.0E-32 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM460_RS15055 3aa9f66428983748b027a855694b01fe 349 PRINTS PR00207 Flagellin signature 111 134 8.0E-32 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM460_RS15055 3aa9f66428983748b027a855694b01fe 349 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-45 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM460_RS15055 3aa9f66428983748b027a855694b01fe 349 Gene3D G3DSA:1.20.1330.10 40 320 4.3E-71 T 29-03-2018 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SMART SM00342 21 104 3.6E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SUPERFAMILY SSF46689 57 108 4.44E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Gene3D G3DSA:1.10.10.60 6 59 6.2E-13 T 29-03-2018 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Gene3D G3DSA:3.20.80.10 122 289 8.1E-22 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SMART SM00871 126 288 1.6E-13 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SUPERFAMILY SSF55136 122 288 2.04E-57 T 29-03-2018 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 8.2E-22 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SUPERFAMILY SSF46689 6 55 1.04E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS00140 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Gene3D G3DSA:1.10.10.60 60 121 5.7E-12 T 29-03-2018 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.6E-84 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.7E-77 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.7E-77 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.7E-77 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.7E-77 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.7E-77 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.7E-77 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.7E-77 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 SUPERFAMILY SSF47240 1 157 1.35E-54 T 29-03-2018 IPR009078 Ferritin-like superfamily AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 Pfam PF00210 Ferritin-like domain 8 144 2.1E-39 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 Gene3D G3DSA:1.20.1260.10 2 153 7.9E-40 T 29-03-2018 IPR012347 Ferritin-related AM460_RS06740 41794e2f15274aa8e594ce47f97a857d 158 PIRSF PIRSF002560 1 157 8.3E-72 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM460_RS00185 c8e3ba9ded296866e8d14fea90f743b8 214 Gene3D G3DSA:3.30.450.20 29 204 8.5E-7 T 29-03-2018 AM460_RS00185 c8e3ba9ded296866e8d14fea90f743b8 214 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 9.4E-67 T 29-03-2018 IPR019305 Uncharacterised protein family Smp AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:3.30.160.20 209 291 1.4E-32 T 29-03-2018 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF00472 RF-1 domain 216 321 1.7E-40 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:1.20.58.410 3 100 2.0E-19 T 29-03-2018 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF03462 PCRF domain 13 203 4.7E-76 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SMART SM00937 63 178 6.8E-72 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 3.0E-177 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SUPERFAMILY SSF75620 12 353 7.32E-138 T 29-03-2018 AM460_RS19025 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.334 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM460_RS02100 18b502d1420a8b81539be8520d37b65a 512 SMART SM00862 24 100 2.7E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS02100 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.10.10.10 1 106 1.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02100 18b502d1420a8b81539be8520d37b65a 512 SUPERFAMILY SSF46894 2 102 3.4E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS02100 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.25.40.10 351 497 6.2E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS02100 18b502d1420a8b81539be8520d37b65a 512 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 100 4.7E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 Pfam PF00764 Arginosuccinate synthase 16 410 9.0E-57 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 Gene3D G3DSA:3.40.50.620 2 178 4.8E-18 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 Gene3D G3DSA:3.90.1260.10 179 374 9.9E-56 T 29-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 SUPERFAMILY SSF69864 190 444 7.59E-81 T 29-03-2018 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 3.3E-170 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 Gene3D G3DSA:1.10.287.400 378 437 2.8E-29 T 29-03-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 SUPERFAMILY SSF52402 3 186 6.05E-35 T 29-03-2018 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS07595 a14eee6a28425349b6d6e22e2d36112d 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 78.07 T 29-03-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS23575 652ee11711aac4d3bfcde55fb6dbc621 127 SUPERFAMILY SSF142906 8 120 3.4E-36 T 29-03-2018 AM460_RS23575 652ee11711aac4d3bfcde55fb6dbc621 127 Pfam PF04237 YjbR 15 106 1.4E-20 T 29-03-2018 IPR007351 Uncharacterised protein YjbR AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.10.10.10 1 79 7.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF07840 FadR C-terminal domain 72 234 3.0E-73 T 29-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF46785 11 88 2.48E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 SMART SM00345 12 71 5.9E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.307 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.8E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.20.120.530 80 239 5.5E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF48008 79 230 5.75E-65 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS19350 48835af5c3e5c8f2b7aba321dfbe6aff 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 1.1E-123 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 SUPERFAMILY SSF88874 799 921 2.09E-28 T 29-03-2018 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Gene3D G3DSA:2.60.40.1120 4 103 1.7E-7 T 29-03-2018 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Pfam PF07484 Phage Tail Collar Domain 805 851 5.4E-11 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Gene3D G3DSA:3.90.1340.10 795 950 7.8E-13 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 SUPERFAMILY SSF88874 964 1029 6.54E-6 T 29-03-2018 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Pfam PF03406 Phage tail fibre repeat 462 502 2.7E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Pfam PF03406 Phage tail fibre repeat 506 546 2.3E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Pfam PF03406 Phage tail fibre repeat 594 633 2.8E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Pfam PF03406 Phage tail fibre repeat 550 590 2.3E-19 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 SUPERFAMILY SSF49464 4 80 1.1E-6 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain AM460_RS11250 90c07fa8d50ccad0f36458351637cd86 1030 Pfam PF08400 Prophage tail fibre N-terminal 1 134 4.3E-72 T 29-03-2018 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 Gene3D G3DSA:1.10.287.130 230 299 6.8E-14 T 29-03-2018 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 460 4.1E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 SUPERFAMILY SSF55874 293 459 4.45E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 SMART SM00388 240 304 2.0E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 2.2E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 SMART SM00304 187 239 5.7E-14 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 Pfam PF00672 HAMP domain 188 235 1.0E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 SUPERFAMILY SSF47384 223 304 3.53E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 Gene3D G3DSA:3.30.565.10 308 467 1.1E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 SUPERFAMILY SSF158472 188 236 3.01E-9 T 29-03-2018 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 SMART SM00387 349 461 5.0E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 3.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 3.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 3.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS13970 7a6c0092e098a64d6befbc54fef80687 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 3.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS11955 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 SUPERFAMILY SSF52833 5 118 3.46E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS11955 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 Gene3D G3DSA:3.40.30.10 1 119 2.1E-37 T 29-03-2018 AM460_RS11955 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 Pfam PF03960 ArsC family 8 117 1.6E-22 T 29-03-2018 IPR006660 Arsenate reductase-like AM460_RS11955 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 1.1E-48 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM460_RS22075 e389f09f9cd3ecd1b3a2499193806674 178 SUPERFAMILY SSF46689 2 81 1.69E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS22075 e389f09f9cd3ecd1b3a2499193806674 178 Gene3D G3DSA:1.10.357.10 1 178 2.0E-31 T 29-03-2018 AM460_RS22075 e389f09f9cd3ecd1b3a2499193806674 178 SUPERFAMILY SSF48498 98 175 2.72E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS22075 e389f09f9cd3ecd1b3a2499193806674 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.4E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS03075 36a957d93359f44ef06dd53b8d53e41b 631 Pfam PF01964 Radical SAM ThiC family 148 596 1.1E-199 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM460_RS03075 36a957d93359f44ef06dd53b8d53e41b 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 1.1E-225 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM460_RS03075 36a957d93359f44ef06dd53b8d53e41b 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 56.236 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM460_RS03075 36a957d93359f44ef06dd53b8d53e41b 631 Pfam PF13667 ThiC-associated domain 27 108 1.1E-32 T 29-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM460_RS23970 421aad75b8e8e2a878fa49d4a7aad2ee 319 Gene3D G3DSA:3.40.50.1820 1 319 2.4E-55 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS23970 421aad75b8e8e2a878fa49d4a7aad2ee 319 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 - T 29-03-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 AM460_RS23970 421aad75b8e8e2a878fa49d4a7aad2ee 319 Hamap MF_01958 Acetyl esterase [aes]. 1 319 72.951 T 29-03-2018 IPR023508 Acetyl esterase GO:0005737|GO:0052689 AM460_RS23970 421aad75b8e8e2a878fa49d4a7aad2ee 319 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 29-03-2018 IPR033140 Lipase, GDXG, putative serine active site AM460_RS23970 421aad75b8e8e2a878fa49d4a7aad2ee 319 Pfam PF07859 alpha/beta hydrolase fold 87 295 9.0E-53 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM460_RS23970 421aad75b8e8e2a878fa49d4a7aad2ee 319 SUPERFAMILY SSF53474 29 316 6.72E-58 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS14070 942a91c77c79ac557d5cd80a27d51f42 297 Gene3D G3DSA:3.90.550.10 1 297 4.8E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS14070 942a91c77c79ac557d5cd80a27d51f42 297 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 297 1.7E-206 T 29-03-2018 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AM460_RS14070 942a91c77c79ac557d5cd80a27d51f42 297 Pfam PF00483 Nucleotidyl transferase 5 274 5.3E-21 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM460_RS14070 942a91c77c79ac557d5cd80a27d51f42 297 SUPERFAMILY SSF53448 2 283 1.46E-57 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 SUPERFAMILY SSF52540 7 219 1.41E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 SUPERFAMILY SSF50331 234 350 3.89E-21 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 Gene3D G3DSA:2.40.50.100 276 349 1.9E-19 T 29-03-2018 AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 Pfam PF03459 TOBE domain 290 350 8.0E-16 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 Gene3D G3DSA:3.40.50.300 16 275 5.7E-55 T 29-03-2018 AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 Pfam PF00005 ABC transporter 17 156 2.5E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 6.6E-165 T 29-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 SMART SM00382 23 206 4.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22495 eeb8dab9b3f02509d5cc4620c5308b07 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 4.1E-22 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 Pfam PF03466 LysR substrate binding domain 137 299 6.8E-10 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 6.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 Gene3D G3DSA:1.10.10.10 6 92 6.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 Gene3D G3DSA:3.40.190.10 114 209 3.1E-4 T 29-03-2018 AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 9.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 9.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 9.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 SUPERFAMILY SSF53850 116 297 7.24E-18 T 29-03-2018 AM460_RS23365 cc8dae45493f50a25903fe5a18e30e6d 300 SUPERFAMILY SSF46785 8 91 3.16E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 1.7E-22 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 2.9E-12 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 2.4E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.4E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 2.4E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 2.4E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.4E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:2.20.25.10 809 863 1.1E-31 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 SMART SM00493 3 132 5.3E-35 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.40.50.140 1 163 2.6E-51 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF57783 809 864 1.7E-23 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF57783 704 743 6.12E-7 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:2.70.20.10 347 467 4.5E-39 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01751 Toprim domain 5 142 4.9E-34 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 55.181 T 29-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 3.5E-269 T 29-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 6.2E-12 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 7.4E-6 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF57783 744 807 1.87E-19 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF56712 3 609 3.92E-208 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01131 DNA topoisomerase 157 565 5.2E-129 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 SMART SM00436 133 221 1.2E-48 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 SMART SM00437 272 527 6.4E-128 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:1.10.460.10 468 577 1.7E-30 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.30.65.10 646 699 0.13 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.30.65.10 745 807 1.2E-9 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.30.65.10 700 744 2.0E-9 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.30.65.10 578 645 1.9E-11 T 29-03-2018 AM460_RS18290 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:1.10.460.10 164 346 4.9E-46 T 29-03-2018 AM460_RS25310 5914a3fc05a844cf4ae18837d666013f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 216 1.1E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS25310 5914a3fc05a844cf4ae18837d666013f 217 Gene3D G3DSA:1.10.3720.10 1 217 3.6E-40 T 29-03-2018 AM460_RS25310 5914a3fc05a844cf4ae18837d666013f 217 SUPERFAMILY SSF161098 9 201 2.49E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS05485 f482944325ae85c7e9a4624ec771d036 96 SMART SM00530 37 91 9.5E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS05485 f482944325ae85c7e9a4624ec771d036 96 SUPERFAMILY SSF47413 38 82 3.22E-7 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS05485 f482944325ae85c7e9a4624ec771d036 96 Pfam PF01381 Helix-turn-helix 38 80 1.4E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS05485 f482944325ae85c7e9a4624ec771d036 96 Gene3D G3DSA:1.10.260.40 16 86 2.1E-9 T 29-03-2018 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 84 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 Hamap MF_01293 D-tagatose-1,6-bisphosphate aldolase subunit KbaY [kbaY]. 1 286 77.401 T 29-03-2018 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY GO:0005975|GO:0008270|GO:0009025|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 PIRSF PIRSF001359 1 284 1.8E-114 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 Gene3D G3DSA:3.20.20.70 1 286 5.3E-103 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 3.1E-163 T 29-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 1.2E-95 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 8.8E-111 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS07755 74cecd945f46054175abc332de8803e8 286 SUPERFAMILY SSF51569 3 283 8.35E-97 T 29-03-2018 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 SUPERFAMILY SSF52540 4 170 1.07E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.5E-29 T 29-03-2018 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.5E-29 T 29-03-2018 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.5E-29 T 29-03-2018 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.5E-29 T 29-03-2018 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.5E-29 T 29-03-2018 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 Gene3D G3DSA:3.40.50.300 1 173 1.3E-36 T 29-03-2018 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.319 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS06475 dee49c32c984d17a3904a2dc6dbfef34 173 Pfam PF01202 Shikimate kinase 13 170 1.0E-56 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS22290 531b7fafb2ca7522d11ad4c7aa1757f8 134 Pfam PF07338 Protein of unknown function (DUF1471) 82 134 1.4E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS22290 531b7fafb2ca7522d11ad4c7aa1757f8 134 SUPERFAMILY SSF159871 51 134 1.44E-22 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS22290 531b7fafb2ca7522d11ad4c7aa1757f8 134 Gene3D G3DSA:3.30.1660.10 70 134 2.3E-20 T 29-03-2018 IPR025543 Dodecin-like AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.4E-18 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 1.8E-13 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50104 1 65 2.71E-11 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.30.30.30 2 63 2.4E-16 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 6.9E-103 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 133 188 1.0E-20 T 29-03-2018 AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 SMART SM00841 133 188 1.7E-26 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 PIRSF PIRSF005901 1 190 5.2E-60 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 66 131 2.0E-15 T 29-03-2018 AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 132 189 6.68E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 43.485 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 67 130 2.27E-11 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 SMART SM01185 69 125 1.4E-13 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 7.5E-17 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like AM460_RS13485 d0f6208c7ec49867d6a18499e56be373 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 Gene3D G3DSA:1.25.40.10 625 666 4.1E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 SUPERFAMILY SSF48452 590 698 1.71E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 Pfam PF13283 Bacteriophage N adsorption protein A C-term 809 977 1.1E-52 T 29-03-2018 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 Gene3D G3DSA:1.25.40.10 579 624 0.041 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 SMART SM00028 646 679 150.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 SMART SM00028 612 645 3.0E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 SMART SM00028 510 545 370.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 Gene3D G3DSA:1.25.40.10 325 578 0.013 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 SUPERFAMILY SSF48452 53 112 2.4E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 SUPERFAMILY SSF48452 504 546 2.4E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 Gene3D G3DSA:1.25.40.10 667 744 0.076 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23635 e12132e40bd2120da78f5d15eca58c13 990 Gene3D G3DSA:1.25.40.10 49 307 3.1E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 SUPERFAMILY SSF46689 229 280 4.48E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 Pfam PF12833 Helix-turn-helix domain 199 278 3.6E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 Gene3D G3DSA:1.10.10.60 169 236 7.2E-8 T 29-03-2018 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 Gene3D G3DSA:1.10.10.60 237 283 1.1E-12 T 29-03-2018 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 SMART SM00342 193 276 1.0E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 6.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 6.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 Pfam PF12852 Cupin 2 162 7.1E-19 T 29-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 SUPERFAMILY SSF51182 43 97 5.27E-5 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 SUPERFAMILY SSF46689 176 224 9.47E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS24845 de1abb11457b8b81b36c605733a54823 284 Gene3D G3DSA:2.60.120.280 25 163 1.7E-12 T 29-03-2018 AM460_RS24530 27dc8fce39de738dddbfdadf099b48f7 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 2.9E-67 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM460_RS24530 27dc8fce39de738dddbfdadf099b48f7 283 SUPERFAMILY SSF51197 5 281 9.62E-100 T 29-03-2018 AM460_RS24530 27dc8fce39de738dddbfdadf099b48f7 283 Gene3D G3DSA:3.60.130.10 1 283 5.6E-86 T 29-03-2018 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM00382 487 654 2.2E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM00382 206 352 2.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 29-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 7.2E-25 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.8.60 351 437 3.1E-27 T 29-03-2018 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 1.2E-35 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 1.2E-35 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 1.2E-35 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 1.2E-35 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF81923 1 141 1.96E-58 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:3.40.50.300 165 350 1.0E-28 T 29-03-2018 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 7.3E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.8.60 653 758 1.8E-25 T 29-03-2018 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 1.9E-47 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF52540 437 748 9.85E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:3.40.50.300 442 652 4.5E-42 T 29-03-2018 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM01086 653 744 7.4E-36 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.1780.10 1 143 1.6E-28 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.9E-15 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS21880 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF52540 169 426 1.77E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11755 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.9E-38 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM460_RS11755 e8b7d7694ac4753e5216a53d66d207fe 107 SUPERFAMILY SSF89360 1 96 1.01E-32 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS11755 e8b7d7694ac4753e5216a53d66d207fe 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM460_RS11755 e8b7d7694ac4753e5216a53d66d207fe 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 46.634 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AM460_RS11755 e8b7d7694ac4753e5216a53d66d207fe 107 Gene3D G3DSA:2.60.300.12 2 107 1.4E-37 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS11755 e8b7d7694ac4753e5216a53d66d207fe 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.5E-26 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS11755 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.6E-62 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 SUPERFAMILY SSF53633 3 308 9.82E-84 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 Gene3D G3DSA:3.40.1160.10 1 310 7.3E-57 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PIRSF PIRSF000723 1 310 5.8E-122 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 Pfam PF00696 Amino acid kinase family 3 288 6.0E-30 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 1.4E-65 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 1.4E-65 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 1.4E-65 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 1.4E-65 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 1.4E-65 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 1.4E-65 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 1.4E-65 T 29-03-2018 AM460_RS09815 21234580f657633dcb2452f6b171e3dc 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 4.2E-116 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM460_RS07790 75af5ee47c161facb21a763251efd566 426 PIRSF PIRSF009264 1 426 8.0E-210 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM460_RS07790 75af5ee47c161facb21a763251efd566 426 Gene3D G3DSA:1.10.400.20 295 408 3.2E-47 T 29-03-2018 AM460_RS07790 75af5ee47c161facb21a763251efd566 426 Hamap MF_01295 D-tagatose-1,6-bisphosphate aldolase subunit KbaZ [kbaZ]. 1 426 81.653 T 29-03-2018 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ AM460_RS07790 75af5ee47c161facb21a763251efd566 426 SUPERFAMILY SSF51569 4 423 1.3E-169 T 29-03-2018 AM460_RS07790 75af5ee47c161facb21a763251efd566 426 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 4.0E-200 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM460_RS07790 75af5ee47c161facb21a763251efd566 426 Gene3D G3DSA:3.20.20.70 4 294 5.6E-71 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS07790 75af5ee47c161facb21a763251efd566 426 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 6.6E-216 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM460_RS24585 f91c1861faee3cd853ed2260a8115a44 269 Gene3D G3DSA:3.90.850.10 1 269 9.3E-58 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM460_RS24585 f91c1861faee3cd853ed2260a8115a44 269 SUPERFAMILY SSF56529 1 259 8.9E-82 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM460_RS24585 f91c1861faee3cd853ed2260a8115a44 269 Hamap MF_01655 2-keto-4-pentenoate hydratase [mhpD]. 1 260 57.192 T 29-03-2018 IPR023793 2-keto-4-pentenoate hydratase GO:0008684|GO:0019439|GO:0030145 KEGG: 00360+4.2.1.80|KEGG: 00362+4.2.1.80|KEGG: 00621+4.2.1.80|KEGG: 00622+4.2.1.80|MetaCyc: PWY-5162|MetaCyc: PWY-5645 AM460_RS24585 f91c1861faee3cd853ed2260a8115a44 269 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 77 259 2.4E-22 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 SUPERFAMILY SSF47413 1 59 1.56E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 SMART SM00354 1 71 5.9E-37 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.7E-36 T 29-03-2018 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 SUPERFAMILY SSF53822 60 333 2.36E-85 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:1.10.260.40 2 54 2.8E-21 T 29-03-2018 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:3.40.50.2300 55 174 1.4E-30 T 29-03-2018 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.3E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS09915 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:3.40.50.2300 175 311 4.7E-43 T 29-03-2018 AM460_RS22365 d0c938714fedc9b781bf354ec1a5aaf0 136 Pfam PF11076 Putative inner membrane protein YbhQ 1 132 8.6E-71 T 29-03-2018 IPR021303 Uncharacterised protein family, inner membrane, YbhQ AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 2.5E-46 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 2.5E-46 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 2.5E-46 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.5E-46 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.5E-46 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 18 192 1.9E-39 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 201 260 1.5E-9 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 SUPERFAMILY SSF51430 5 268 8.25E-91 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 PIRSF PIRSF000097 110 270 4.6E-54 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 PIRSF PIRSF000097 1 115 5.3E-47 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 Gene3D G3DSA:3.20.20.100 2 274 1.3E-93 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS08500 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS11690 7cbef978ce43fd9a48a53c31aa4b8a10 290 SUPERFAMILY SSF74650 2 287 1.32E-48 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS11690 7cbef978ce43fd9a48a53c31aa4b8a10 290 Gene3D G3DSA:2.70.98.10 1 290 1.1E-51 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS11690 7cbef978ce43fd9a48a53c31aa4b8a10 290 Pfam PF01263 Aldose 1-epimerase 3 285 5.3E-47 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 Pfam PF00263 Bacterial type II and III secretion system protein 433 595 2.1E-51 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 429 453 1.1E-42 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 464 474 1.1E-42 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 577 1.1E-42 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 347 357 1.1E-42 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 582 596 1.1E-42 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 540 573 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 Pfam PF03958 Bacterial type II/III secretion system short domain 127 186 7.5E-11 T 29-03-2018 IPR005644 NolW-like AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 Pfam PF03958 Bacterial type II/III secretion system short domain 268 347 1.5E-15 T 29-03-2018 IPR005644 NolW-like AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 Pfam PF03958 Bacterial type II/III secretion system short domain 193 262 7.0E-17 T 29-03-2018 IPR005644 NolW-like AM460_RS06795 ef0c9e62c1ac35211f0e17e4fb537b74 650 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 604 2.7E-195 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 Pfam PF00270 DEAD/DEAH box helicase 31 95 1.4E-5 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 Pfam PF13307 Helicase C-terminal domain 532 688 1.5E-23 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 Pfam PF06733 DEAD_2 200 264 1.8E-7 T 29-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 SMART SM00488 18 294 0.0062 T 29-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 SUPERFAMILY SSF52540 199 271 1.74E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 SUPERFAMILY SSF52540 46 97 1.74E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 SUPERFAMILY SSF52540 451 465 1.74E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 SUPERFAMILY SSF52540 500 670 1.74E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 SMART SM00487 23 303 7.6E-6 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 SMART SM00491 544 676 3.3E-38 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 Gene3D G3DSA:3.40.50.300 510 686 7.3E-5 T 29-03-2018 AM460_RS22325 b29f4fd6fab03344622ae0ecb23cd8e9 716 Gene3D G3DSA:3.40.50.300 24 483 3.9E-27 T 29-03-2018 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 7.2E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 7.2E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 7.2E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 7.2E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 7.2E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 Pfam PF01433 Peptidase family M1 domain 208 439 3.9E-60 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 Gene3D G3DSA:1.10.390.10 280 443 9.9E-52 T 29-03-2018 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 Gene3D G3DSA:1.25.50.10 546 870 5.2E-122 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 29-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 SUPERFAMILY SSF63737 1 193 4.05E-46 T 29-03-2018 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 545 3.4E-33 T 29-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 4.0E-118 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 Gene3D G3DSA:2.60.40.1730 15 194 1.9E-30 T 29-03-2018 AM460_RS20850 e29bc0caa34fbda1b51303822397a23f 870 SUPERFAMILY SSF55486 204 450 1.19E-75 T 29-03-2018 AM460_RS01830 2c70bd3f98a7cca338bd0e39acb07af6 219 Pfam PF10679 Protein of unknown function (DUF2491) 4 215 3.1E-68 T 29-03-2018 IPR019621 Protein of unknown function DUF2491 AM460_RS10355 d6b96fd0672808bb1073299e9289602c 263 Gene3D G3DSA:1.10.287.1080 3 121 8.0E-43 T 29-03-2018 AM460_RS10355 d6b96fd0672808bb1073299e9289602c 263 SUPERFAMILY SSF101386 135 236 3.36E-24 T 29-03-2018 AM460_RS10355 d6b96fd0672808bb1073299e9289602c 263 SUPERFAMILY SSF101386 2 105 3.34E-26 T 29-03-2018 AM460_RS10355 d6b96fd0672808bb1073299e9289602c 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 2.0E-126 T 29-03-2018 IPR011551 NTP pyrophosphohydrolase MazG AM460_RS10355 d6b96fd0672808bb1073299e9289602c 263 Gene3D G3DSA:1.10.287.1080 122 222 3.0E-26 T 29-03-2018 AM460_RS10355 d6b96fd0672808bb1073299e9289602c 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 2.7E-28 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM460_RS10355 d6b96fd0672808bb1073299e9289602c 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 227 1.2E-7 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 SUPERFAMILY SSF55174 17 69 6.39E-12 T 29-03-2018 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 SUPERFAMILY SSF55120 77 323 2.26E-79 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 Gene3D G3DSA:3.30.2350.10 83 316 3.4E-69 T 29-03-2018 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 Gene3D G3DSA:3.10.290.10 2 76 8.6E-23 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 SMART SM00363 18 83 9.1E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.4E-31 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 Pfam PF01479 S4 domain 18 65 7.4E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS11410 d2abf19c417b509347fb0595accecae9 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 1.1E-111 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 PIRSF PIRSF036426 1 457 6.7E-205 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:1.10.8.210 151 209 5.9E-19 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.40.50.720 3 120 1.6E-19 T 29-03-2018 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 1.6E-70 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 SUPERFAMILY SSF75615 114 207 1.96E-26 T 29-03-2018 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.30.950.10 341 457 5.5E-39 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.976 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 7.2E-9 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 SUPERFAMILY SSF53790 215 456 1.57E-79 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.9E-18 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Pfam PF13241 Putative NAD(P)-binding 6 115 1.7E-25 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.6E-91 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 SUPERFAMILY SSF51735 2 112 4.44E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.40.1010.10 215 340 3.1E-35 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 2.3E-50 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS06560 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.30.160.110 121 148 6.4E-17 T 29-03-2018 AM460_RS20390 853aef1b6fcd32d84f8fd7cabb4572f7 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 6 129 5.8E-37 T 29-03-2018 IPR018893 Type VIII secretion system, CsgF AM460_RS18090 38747266811f5e16e641bc44e4693edd 559 SUPERFAMILY SSF51445 397 505 6.74E-77 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS18090 38747266811f5e16e641bc44e4693edd 559 SUPERFAMILY SSF51445 44 357 6.74E-77 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS18090 38747266811f5e16e641bc44e4693edd 559 Pfam PF00128 Alpha amylase, catalytic domain 83 338 3.5E-18 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS18090 38747266811f5e16e641bc44e4693edd 559 Gene3D G3DSA:3.20.20.80 77 489 2.5E-55 T 29-03-2018 AM460_RS18090 38747266811f5e16e641bc44e4693edd 559 PIRSF PIRSF003059 2 559 3.3E-219 T 29-03-2018 IPR016377 Sucrose phosphorylase-related GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 AM460_RS18090 38747266811f5e16e641bc44e4693edd 559 SMART SM00642 48 477 1.3E-5 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 5.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 5.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 SUPERFAMILY SSF46689 223 272 5.38E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 SMART SM00342 187 270 1.1E-33 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 53.368 T 29-03-2018 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 Pfam PF02311 AraC-like ligand binding domain 16 154 2.2E-22 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 SUPERFAMILY SSF51215 15 158 4.58E-14 T 29-03-2018 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 Gene3D G3DSA:1.10.10.60 168 227 1.6E-13 T 29-03-2018 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 SUPERFAMILY SSF46689 171 221 1.97E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 Pfam PF12833 Helix-turn-helix domain 193 271 8.7E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 Gene3D G3DSA:2.60.120.280 12 164 7.3E-16 T 29-03-2018 AM460_RS03550 82b945d6a2f7404c3c65a0656272aeb2 278 Gene3D G3DSA:1.10.10.60 228 274 1.0E-14 T 29-03-2018 AM460_RS23205 f178f791322fdabd64bd78ba631d77bf 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM460_RS23205 f178f791322fdabd64bd78ba631d77bf 370 Pfam PF01098 Cell cycle protein 20 364 6.7E-126 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AM460_RS23205 f178f791322fdabd64bd78ba631d77bf 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.1E-137 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.30.390.10 3 127 6.0E-52 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 339 353 3.9E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 368 385 3.9E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 316 327 3.9E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 SMART SM01192 143 430 1.3E-215 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF54826 3 138 3.71E-57 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 6.1E-143 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 PIRSF PIRSF001400 1 430 4.9E-194 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 8.8E-207 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 SMART SM01193 4 134 2.6E-94 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 29-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 Hamap MF_00318 Enolase [eno]. 2 416 44.545 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 Pfam PF03952 Enolase, N-terminal domain 4 134 8.2E-59 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.20.20.120 128 431 1.6E-105 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS10365 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF51604 143 427 9.34E-129 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS26060 6fc1930b95d563901a614aecb1208490 254 Pfam PF09335 SNARE associated Golgi protein 36 159 1.6E-18 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.2E-140 T 29-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 Gene3D G3DSA:3.90.110.10 148 312 1.6E-43 T 29-03-2018 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 29-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.9E-52 T 29-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 SUPERFAMILY SSF56327 146 311 2.16E-42 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 61.568 T 29-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 PIRSF PIRSF000102 1 310 2.4E-60 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 SUPERFAMILY SSF51735 1 145 3.51E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.9E-46 T 29-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AM460_RS07295 e900d4236746abfdd6436dab2615ca4b 312 Gene3D G3DSA:3.40.50.720 2 147 3.7E-40 T 29-03-2018 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 SMART SM00883 2 95 4.3E-50 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.098 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.9E-30 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 Gene3D G3DSA:2.30.33.40 1 96 1.4E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM460_RS02050 14aed608b903e87469e861e7f4f44d91 97 SUPERFAMILY SSF50129 1 96 1.29E-31 T 29-03-2018 IPR011032 GroES-like AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.0E-32 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 SUPERFAMILY SSF46946 130 222 3.93E-31 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.2E-108 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 SMART SM01232 129 221 3.8E-50 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.2E-31 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 SUPERFAMILY SSF81624 2 138 4.84E-45 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 SUPERFAMILY SSF57716 217 269 2.85E-17 T 29-03-2018 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 Gene3D G3DSA:1.10.8.50 131 269 2.9E-51 T 29-03-2018 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 SMART SM00898 2 115 2.8E-55 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 Gene3D G3DSA:3.20.190.10 1 130 8.0E-38 T 29-03-2018 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.2E-9 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.769 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM460_RS05075 db028f41466ab64661a2627c5336d2c4 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM460_RS05560 462381d1f9177a9af316dab6fb71b1f4 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.4E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS05560 462381d1f9177a9af316dab6fb71b1f4 300 SUPERFAMILY SSF161098 93 280 6.41E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS05560 462381d1f9177a9af316dab6fb71b1f4 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 1.6E-16 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM460_RS05560 462381d1f9177a9af316dab6fb71b1f4 300 Gene3D G3DSA:1.10.3720.10 21 287 2.7E-47 T 29-03-2018 AM460_RS12975 087347c9546a84f3e0d3a17f7feeeda0 580 Pfam PF00092 von Willebrand factor type A domain 221 390 1.6E-23 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS12975 087347c9546a84f3e0d3a17f7feeeda0 580 Gene3D G3DSA:3.40.50.410 219 398 5.6E-33 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS12975 087347c9546a84f3e0d3a17f7feeeda0 580 SUPERFAMILY SSF53300 220 395 2.88E-36 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS12975 087347c9546a84f3e0d3a17f7feeeda0 580 SMART SM00327 219 395 2.0E-31 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS12975 087347c9546a84f3e0d3a17f7feeeda0 580 Pfam PF12034 Domain of unknown function (DUF3520) 398 574 1.7E-67 T 29-03-2018 IPR021908 Protein of unknown function DUF3520 AM460_RS12975 087347c9546a84f3e0d3a17f7feeeda0 580 Pfam PF12450 von Willebrand factor 106 204 7.2E-33 T 29-03-2018 IPR022156 Uncharacterised protein YfbK, N-terminal AM460_RS17250 8c4dfed5050a8ab9d148dfe9c4ae5a02 53 Pfam PF04076 Bacterial OB fold (BOF) protein 19 53 4.1E-8 T 29-03-2018 IPR005220 Bacterial OB-fold AM460_RS10545 c5858ee64915de56e0510dd7c3386aee 379 Gene3D G3DSA:3.10.350.10 116 170 7.9E-10 T 29-03-2018 AM460_RS10545 c5858ee64915de56e0510dd7c3386aee 379 SMART SM00257 122 166 9.3E-12 T 29-03-2018 IPR018392 LysM domain AM460_RS10545 c5858ee64915de56e0510dd7c3386aee 379 SUPERFAMILY SSF51261 122 376 1.78E-53 T 29-03-2018 IPR011055 Duplicated hybrid motif AM460_RS10545 c5858ee64915de56e0510dd7c3386aee 379 Pfam PF01551 Peptidase family M23 279 372 1.2E-31 T 29-03-2018 IPR016047 Peptidase M23 AM460_RS10545 c5858ee64915de56e0510dd7c3386aee 379 Pfam PF01476 LysM domain 123 165 1.4E-11 T 29-03-2018 IPR018392 LysM domain AM460_RS10545 c5858ee64915de56e0510dd7c3386aee 379 Gene3D G3DSA:2.70.70.10 208 379 5.5E-38 T 29-03-2018 AM460_RS17775 702375b166e5701885362211213db51b 49 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 3.0E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS17775 702375b166e5701885362211213db51b 49 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS17775 702375b166e5701885362211213db51b 49 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 5.8E-13 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS17775 702375b166e5701885362211213db51b 49 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 5.8E-13 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS17775 702375b166e5701885362211213db51b 49 Pfam PF01848 Hok/gef family 6 46 7.1E-21 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS00950 1337636fc722f0aabf18ca842cff50f8 579 Gene3D G3DSA:3.40.1800.10 231 347 1.3E-4 T 29-03-2018 AM460_RS00950 1337636fc722f0aabf18ca842cff50f8 579 TIGRFAM TIGR02986 restrict_Alw26I: type II restriction endonuclease, Alw26I/Eco31I/Esp3I family 40 476 5.1E-200 T 29-03-2018 IPR014328 Restriction endonuclease, type II, Alw26I/Eco31I/Esp3I AM460_RS00950 1337636fc722f0aabf18ca842cff50f8 579 Pfam PF09665 Type II restriction endonuclease (RE_Alw26IDE) 41 531 1.4E-180 T 29-03-2018 IPR014328 Restriction endonuclease, type II, Alw26I/Eco31I/Esp3I AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 SUPERFAMILY SSF111369 187 260 1.31E-9 T 29-03-2018 AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 SUPERFAMILY SSF111369 57 154 1.31E-9 T 29-03-2018 AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 285 6.5E-14 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 Pfam PF00529 HlyD membrane-fusion protein of T1SS 39 340 2.5E-16 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 14 338 9.6E-146 T 29-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 Gene3D G3DSA:2.40.50.100 56 131 2.0E-9 T 29-03-2018 AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 Gene3D G3DSA:2.40.50.100 201 317 3.2E-9 T 29-03-2018 AM460_RS12495 efcc62c00fad6f2c32c5e8f54a3d1a02 387 Gene3D G3DSA:1.10.287.470 132 179 2.5E-8 T 29-03-2018 AM460_RS19570 94259218cf05b094dce6a007747b5fec 285 Pfam PF00950 ABC 3 transport family 9 264 1.4E-82 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM460_RS19570 94259218cf05b094dce6a007747b5fec 285 Gene3D G3DSA:1.10.3470.10 2 272 2.1E-27 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS19570 94259218cf05b094dce6a007747b5fec 285 SUPERFAMILY SSF81345 4 260 5.62E-39 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 Gene3D G3DSA:3.40.50.720 396 561 4.3E-25 T 29-03-2018 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 2.0E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 2.0E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 2.0E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 2.0E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 SUPERFAMILY SSF51735 401 530 1.05E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 3.8E-62 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 7.5E-94 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 Gene3D G3DSA:1.20.91.10 232 312 5.7E-12 T 29-03-2018 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 Pfam PF02254 TrkA-N domain 402 512 3.6E-26 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM460_RS26175 d4446969540fb4ac4f9446c3462e86eb 620 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 607 55.417 T 29-03-2018 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 AM460_RS05715 03e1dfac236d31f5e8cf6f3b8c8905a2 299 Pfam PF03466 LysR substrate binding domain 89 292 6.0E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS05715 03e1dfac236d31f5e8cf6f3b8c8905a2 299 SUPERFAMILY SSF46785 4 84 3.16E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05715 03e1dfac236d31f5e8cf6f3b8c8905a2 299 Gene3D G3DSA:3.40.190.10 90 172 1.0E-9 T 29-03-2018 AM460_RS05715 03e1dfac236d31f5e8cf6f3b8c8905a2 299 Gene3D G3DSA:1.10.10.10 3 81 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05715 03e1dfac236d31f5e8cf6f3b8c8905a2 299 SUPERFAMILY SSF53850 90 297 2.17E-45 T 29-03-2018 AM460_RS05715 03e1dfac236d31f5e8cf6f3b8c8905a2 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS05715 03e1dfac236d31f5e8cf6f3b8c8905a2 299 Gene3D G3DSA:3.40.190.10 173 262 6.8E-22 T 29-03-2018 AM460_RS23915 a464b6381bd664394d30d251e50b76e7 100 SUPERFAMILY SSF143011 9 98 1.57E-14 T 29-03-2018 IPR035095 Toxin RelE-like domain AM460_RS23915 a464b6381bd664394d30d251e50b76e7 100 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 9 98 8.2E-30 T 29-03-2018 IPR007711 Toxin HigB-1 AM460_RS23915 a464b6381bd664394d30d251e50b76e7 100 Gene3D G3DSA:3.30.2310.20 5 98 1.6E-22 T 29-03-2018 AM460_RS20590 53c54daeb288cb9146de2b167bc80a25 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 44 337 1.8E-94 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM460_RS20590 53c54daeb288cb9146de2b167bc80a25 342 SUPERFAMILY SSF53822 45 302 1.27E-38 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS20590 53c54daeb288cb9146de2b167bc80a25 342 Gene3D G3DSA:3.40.50.2300 159 303 1.4E-16 T 29-03-2018 AM460_RS20590 53c54daeb288cb9146de2b167bc80a25 342 Gene3D G3DSA:3.40.50.2300 45 158 4.2E-16 T 29-03-2018 AM460_RS20590 53c54daeb288cb9146de2b167bc80a25 342 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 46 334 2.6E-131 T 29-03-2018 IPR014301 TMAO reductase system, periplasmic protein TorT AM460_RS09745 6241eced445aee2064ea4e187fef628c 482 Pfam PF00860 Permease family 29 408 3.1E-121 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS09745 6241eced445aee2064ea4e187fef628c 482 TIGRFAM TIGR03173 pbuX: xanthine permease 33 443 1.4E-153 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AM460_RS09745 6241eced445aee2064ea4e187fef628c 482 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS09745 6241eced445aee2064ea4e187fef628c 482 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 440 1.8E-136 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 296 8.3E-25 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 29-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 Gene3D G3DSA:3.40.190.10 2 106 2.9E-44 T 29-03-2018 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 Gene3D G3DSA:3.40.190.10 107 199 3.8E-37 T 29-03-2018 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 SUPERFAMILY SSF54782 220 308 4.32E-29 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 40.204 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 2.3E-78 T 29-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 SUPERFAMILY SSF53850 5 219 5.72E-86 T 29-03-2018 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 3.1E-112 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 Gene3D G3DSA:3.30.160.40 221 306 6.6E-26 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04160 60f7d4d8a45e887e3c506814cac2e707 313 PIRSF PIRSF001438 1 311 5.5E-123 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS02310 d9f0962ddd625813a6620263c1c65d58 262 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 1.7E-104 T 29-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AM460_RS02310 d9f0962ddd625813a6620263c1c65d58 262 Pfam PF00005 ABC transporter 20 181 5.1E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02310 d9f0962ddd625813a6620263c1c65d58 262 SUPERFAMILY SSF52540 3 240 6.31E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02310 d9f0962ddd625813a6620263c1c65d58 262 SMART SM00382 29 229 6.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02310 d9f0962ddd625813a6620263c1c65d58 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02310 d9f0962ddd625813a6620263c1c65d58 262 Gene3D G3DSA:3.40.50.300 1 261 1.5E-58 T 29-03-2018 AM460_RS27915 ad91be4ae62c34093e6ac0c572355603 154 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 46 151 3.8E-24 T 29-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 AM460_RS27915 ad91be4ae62c34093e6ac0c572355603 154 Gene3D G3DSA:2.30.30.110 40 154 4.3E-22 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS27915 ad91be4ae62c34093e6ac0c572355603 154 PIRSF PIRSF033490 43 154 4.1E-23 T 29-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 AM460_RS27915 ad91be4ae62c34093e6ac0c572355603 154 SUPERFAMILY SSF50118 45 153 3.49E-32 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS17730 b73ef74480fac4538f9a666ea4af53b9 326 SUPERFAMILY SSF51161 4 318 2.97E-59 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS17730 b73ef74480fac4538f9a666ea4af53b9 326 Gene3D G3DSA:2.160.10.10 134 303 4.7E-14 T 29-03-2018 AM460_RS17730 b73ef74480fac4538f9a666ea4af53b9 326 Gene3D G3DSA:2.160.10.10 46 133 3.1E-13 T 29-03-2018 AM460_RS16890 d76a3d3965661b7f68059d8501c00579 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 8.2E-18 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM460_RS16890 d76a3d3965661b7f68059d8501c00579 201 SUPERFAMILY SSF47616 83 199 4.37E-30 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS16890 d76a3d3965661b7f68059d8501c00579 201 SUPERFAMILY SSF52833 1 79 1.97E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS16890 d76a3d3965661b7f68059d8501c00579 201 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 75 3.6E-9 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS16890 d76a3d3965661b7f68059d8501c00579 201 Gene3D G3DSA:3.40.30.10 1 97 3.1E-19 T 29-03-2018 AM460_RS16890 d76a3d3965661b7f68059d8501c00579 201 Gene3D G3DSA:1.20.1050.10 98 200 4.5E-25 T 29-03-2018 AM460_RS11600 69965a3433cd0b8554c3c257d6ab2ab8 282 SUPERFAMILY SSF46689 1 77 3.4E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS11600 69965a3433cd0b8554c3c257d6ab2ab8 282 Gene3D G3DSA:3.40.50.10490 82 274 2.6E-28 T 29-03-2018 AM460_RS11600 69965a3433cd0b8554c3c257d6ab2ab8 282 SUPERFAMILY SSF53697 100 261 8.34E-31 T 29-03-2018 AM460_RS11600 69965a3433cd0b8554c3c257d6ab2ab8 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 77 3.2E-30 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM460_RS11600 69965a3433cd0b8554c3c257d6ab2ab8 282 Gene3D G3DSA:1.10.10.10 1 81 2.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11600 69965a3433cd0b8554c3c257d6ab2ab8 282 Pfam PF01380 SIS domain 128 258 5.0E-31 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS14265 cde4763fcefe996b6c1cff110f9aa96b 109 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 2.0E-43 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AM460_RS14265 cde4763fcefe996b6c1cff110f9aa96b 109 PIRSF PIRSF028773 1 109 8.5E-54 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AM460_RS14265 cde4763fcefe996b6c1cff110f9aa96b 109 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.713 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AM460_RS14265 cde4763fcefe996b6c1cff110f9aa96b 109 Pfam PF04363 Protein of unknown function (DUF496) 8 99 3.0E-46 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AM460_RS12090 c4a3a7d125eee1aed6541ce9f48ff95d 267 Gene3D G3DSA:1.20.1200.10 94 255 2.1E-16 T 29-03-2018 AM460_RS12090 c4a3a7d125eee1aed6541ce9f48ff95d 267 PIRSF PIRSF012294 1 255 1.0E-111 T 29-03-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM460_RS12090 c4a3a7d125eee1aed6541ce9f48ff95d 267 Pfam PF01923 Cobalamin adenosyltransferase 95 246 2.8E-12 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM460_RS12090 c4a3a7d125eee1aed6541ce9f48ff95d 267 SUPERFAMILY SSF89028 93 250 6.47E-13 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM460_RS27440 8a1938796c5df30ac3ecf9402353ae33 941 Pfam PF07916 TraG-like protein, N-terminal region 3 444 9.5E-114 T 29-03-2018 IPR012931 TraG-like, N-terminal AM460_RS27440 8a1938796c5df30ac3ecf9402353ae33 941 Gene3D G3DSA:1.20.120.20 425 939 2.0E-4 T 29-03-2018 AM460_RS28020 8a1938796c5df30ac3ecf9402353ae33 941 Pfam PF07916 TraG-like protein, N-terminal region 3 444 9.5E-114 T 29-03-2018 IPR012931 TraG-like, N-terminal AM460_RS28020 8a1938796c5df30ac3ecf9402353ae33 941 Gene3D G3DSA:1.20.120.20 425 939 2.0E-4 T 29-03-2018 AM460_RS25590 163394691fc52d5ca5b6ccf79264b3ec 176 Pfam PF02834 LigT like Phosphoesterase 11 89 1.4E-12 T 29-03-2018 IPR014051 Phosphoesterase, HXTX AM460_RS25590 163394691fc52d5ca5b6ccf79264b3ec 176 Pfam PF02834 LigT like Phosphoesterase 92 166 8.2E-8 T 29-03-2018 IPR014051 Phosphoesterase, HXTX AM460_RS25590 163394691fc52d5ca5b6ccf79264b3ec 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 2.1E-44 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM460_RS25590 163394691fc52d5ca5b6ccf79264b3ec 176 Gene3D G3DSA:3.90.1140.10 1 176 1.4E-29 T 29-03-2018 AM460_RS25590 163394691fc52d5ca5b6ccf79264b3ec 176 SUPERFAMILY SSF55144 6 174 3.92E-45 T 29-03-2018 IPR009097 Cyclic phosphodiesterase AM460_RS25590 163394691fc52d5ca5b6ccf79264b3ec 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 22.43 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM460_RS06010 044ddba053477e65f227875e9fad2ea1 277 SUPERFAMILY SSF161098 66 255 4.41E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06010 044ddba053477e65f227875e9fad2ea1 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 9.6E-120 T 29-03-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 AM460_RS06010 044ddba053477e65f227875e9fad2ea1 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 2.7E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06010 044ddba053477e65f227875e9fad2ea1 277 Gene3D G3DSA:1.10.3720.10 4 261 6.8E-30 T 29-03-2018 AM460_RS20835 d80f9861d55b2987e7635cf75fad674f 381 Gene3D G3DSA:3.20.20.30 1 354 1.4E-91 T 29-03-2018 AM460_RS20835 d80f9861d55b2987e7635cf75fad674f 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 71.059 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM460_RS20835 d80f9861d55b2987e7635cf75fad674f 381 SUPERFAMILY SSF51679 3 349 2.09E-98 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM460_RS20835 d80f9861d55b2987e7635cf75fad674f 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 1.1E-190 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM460_RS20835 d80f9861d55b2987e7635cf75fad674f 381 Pfam PF00296 Luciferase-like monooxygenase 5 326 7.1E-87 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 Pfam PF00384 Molybdopterin oxidoreductase 99 572 1.5E-106 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 Pfam PF01568 Molydopterin dinucleotide binding domain 690 811 7.3E-24 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 Gene3D G3DSA:3.40.228.10 471 530 0.0052 T 29-03-2018 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 Gene3D G3DSA:3.40.228.10 194 441 2.4E-51 T 29-03-2018 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 SUPERFAMILY SSF50692 684 832 3.39E-44 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 Gene3D G3DSA:2.40.40.20 663 828 4.8E-32 T 29-03-2018 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 SUPERFAMILY SSF53706 57 674 2.09E-162 T 29-03-2018 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 515 532 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 56 835 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 Gene3D G3DSA:3.90.55.10 50 139 4.6E-17 T 29-03-2018 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 Gene3D G3DSA:3.90.55.10 538 623 4.1E-23 T 29-03-2018 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 7 835 0.0 T 29-03-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 AM460_RS20575 e9195fe9c9b2a37442a445e5fec7bf4d 848 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 730 757 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS22185 aac6c9d6e5e236c45d43169bed1128b5 249 SUPERFAMILY SSF69572 3 248 2.22E-87 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM460_RS22185 aac6c9d6e5e236c45d43169bed1128b5 249 Pfam PF00899 ThiF family 12 244 2.9E-64 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM460_RS22185 aac6c9d6e5e236c45d43169bed1128b5 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 2.2E-137 T 29-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AM460_RS22185 aac6c9d6e5e236c45d43169bed1128b5 249 Gene3D G3DSA:3.40.50.720 1 249 6.9E-78 T 29-03-2018 AM460_RS08350 ef0dad65ad91b11ac442e559dda68e16 193 SUPERFAMILY SSF53474 3 188 2.66E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS08350 ef0dad65ad91b11ac442e559dda68e16 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 2.0E-74 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM460_RS08350 ef0dad65ad91b11ac442e559dda68e16 193 Gene3D G3DSA:3.40.50.1820 2 192 2.2E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 Gene3D G3DSA:3.30.70.1450 415 487 3.0E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 SUPERFAMILY SSF116726 417 483 6.54E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 SUPERFAMILY SSF56176 497 571 1.45E-8 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 50.508 T 29-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 SMART SM01091 492 573 6.1E-14 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 Gene3D G3DSA:3.30.465.10 492 573 1.7E-7 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF00999 Sodium/hydrogen exchanger family 16 388 9.1E-61 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF03471 Transporter associated domain 493 571 2.5E-9 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS19330 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF02080 TrkA-C domain 421 483 2.6E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS10755 38defd9fb751e2ec03f2e8c87ad55a28 319 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 226 318 5.9E-43 T 29-03-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS10755 38defd9fb751e2ec03f2e8c87ad55a28 319 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 319 3.7E-189 T 29-03-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS10755 38defd9fb751e2ec03f2e8c87ad55a28 319 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 171 1.2E-67 T 29-03-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS15650 865aeba049510fa41d5c2c79e03b0e11 246 Pfam PF01709 Transcriptional regulator 5 235 2.4E-95 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS15650 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.70.980 83 176 6.1E-32 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS15650 865aeba049510fa41d5c2c79e03b0e11 246 SUPERFAMILY SSF75625 3 244 7.19E-98 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS15650 865aeba049510fa41d5c2c79e03b0e11 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.763 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS15650 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.70.980 177 246 1.2E-12 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS15650 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:1.10.10.200 1 78 1.6E-30 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AM460_RS15650 865aeba049510fa41d5c2c79e03b0e11 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.5E-107 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS01405 4c7f4d37ee5f227c696235bc2b2d9035 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 4.4E-39 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM460_RS01405 4c7f4d37ee5f227c696235bc2b2d9035 147 Gene3D G3DSA:3.40.50.10110 1 147 3.3E-52 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM460_RS01405 4c7f4d37ee5f227c696235bc2b2d9035 147 SUPERFAMILY SSF102400 1 145 3.53E-47 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM460_RS14935 dcdf00d59ee58c1b955be339cc0c83b3 457 SUPERFAMILY SSF52540 109 379 1.69E-92 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14935 dcdf00d59ee58c1b955be339cc0c83b3 457 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 453 3.7E-201 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS14935 dcdf00d59ee58c1b955be339cc0c83b3 457 Gene3D G3DSA:3.40.50.300 49 373 9.2E-81 T 29-03-2018 AM460_RS14935 dcdf00d59ee58c1b955be339cc0c83b3 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 1.6E-70 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS14935 dcdf00d59ee58c1b955be339cc0c83b3 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS14935 dcdf00d59ee58c1b955be339cc0c83b3 457 SMART SM00382 174 357 7.6E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS14935 dcdf00d59ee58c1b955be339cc0c83b3 457 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 7.0E-196 T 29-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 1.6E-31 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 45 1.1E-6 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 Gene3D G3DSA:4.10.480.10 235 309 2.7E-34 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PIRSF PIRSF000310 5 357 9.4E-147 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 1.0E-118 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 1.5E-28 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 360 1.7E-203 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 SUPERFAMILY SSF56770 46 310 9.03E-87 T 29-03-2018 AM460_RS20675 a76f10e2fb677227fff4596fd9a3136c 372 Gene3D G3DSA:3.40.50.700 45 234 8.6E-49 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 SUPERFAMILY SSF46785 5 143 2.73E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 Gene3D G3DSA:1.10.10.10 7 144 8.7E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 Pfam PF01047 MarR family 38 96 4.2E-18 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.2E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 3.2E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.2E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.2E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS17285 6f749eb022a676f64f3d6c1a46e2c37a 144 SMART SM00347 31 132 3.9E-34 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS22080 3bf9a0f4031db7f733ced1aabfacab00 402 SUPERFAMILY SSF103473 11 390 1.83E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS22080 3bf9a0f4031db7f733ced1aabfacab00 402 Gene3D G3DSA:1.20.1250.20 3 208 2.0E-14 T 29-03-2018 AM460_RS22080 3bf9a0f4031db7f733ced1aabfacab00 402 Gene3D G3DSA:1.20.1250.20 209 402 7.3E-25 T 29-03-2018 AM460_RS22080 3bf9a0f4031db7f733ced1aabfacab00 402 Pfam PF07690 Major Facilitator Superfamily 223 388 3.1E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS13945 a1c2f52045523c198810993f08e1cdc3 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 299 44.393 T 29-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM460_RS13945 a1c2f52045523c198810993f08e1cdc3 299 SUPERFAMILY SSF111331 8 297 8.72E-68 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM460_RS13945 a1c2f52045523c198810993f08e1cdc3 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 7.1E-123 T 29-03-2018 IPR005218 Diacylglycerol/lipid kinase AM460_RS13945 a1c2f52045523c198810993f08e1cdc3 299 Gene3D G3DSA:3.40.50.10330 6 132 2.7E-27 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM460_RS13945 a1c2f52045523c198810993f08e1cdc3 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 1.4E-27 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM460_RS13945 a1c2f52045523c198810993f08e1cdc3 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 2.5E-141 T 29-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM460_RS13945 a1c2f52045523c198810993f08e1cdc3 299 SMART SM00046 6 132 3.6E-35 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM460_RS10760 0fb9b926c58c1b09279c09476a4486a6 187 PIRSF PIRSF038321 2 182 1.0E-87 T 29-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM460_RS10760 0fb9b926c58c1b09279c09476a4486a6 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 2.1E-112 T 29-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM460_RS10760 0fb9b926c58c1b09279c09476a4486a6 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 171 3.0E-75 T 29-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM460_RS19970 8c3f834f2b48ba30f0bcdc5872ea849f 414 Gene3D G3DSA:1.20.1250.20 3 404 0.0027 T 29-03-2018 AM460_RS19970 8c3f834f2b48ba30f0bcdc5872ea849f 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 1.6E-14 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM460_RS19970 8c3f834f2b48ba30f0bcdc5872ea849f 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 7.6E-238 T 29-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 AM460_RS19970 8c3f834f2b48ba30f0bcdc5872ea849f 414 Pfam PF02687 FtsX-like permease family 302 407 4.5E-12 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM460_RS19970 8c3f834f2b48ba30f0bcdc5872ea849f 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 2.2E-167 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM460_RS16835 87a51119b37f34bc51d9389129b6acc2 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 172 1.1E-30 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM460_RS16835 87a51119b37f34bc51d9389129b6acc2 173 Gene3D G3DSA:2.60.40.200 19 173 1.1E-35 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM460_RS16835 87a51119b37f34bc51d9389129b6acc2 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 29-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM460_RS16835 87a51119b37f34bc51d9389129b6acc2 173 SUPERFAMILY SSF49329 23 173 5.37E-46 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM460_RS09045 3eabade521bab6153d372290ea5b3678 696 SUPERFAMILY SSF56935 26 696 2.24E-129 T 29-03-2018 AM460_RS09045 3eabade521bab6153d372290ea5b3678 696 Pfam PF00593 TonB dependent receptor 215 695 3.4E-68 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS09045 3eabade521bab6153d372290ea5b3678 696 Gene3D G3DSA:2.40.170.20 163 696 6.4E-86 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS09045 3eabade521bab6153d372290ea5b3678 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 152 6.1E-28 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS09045 3eabade521bab6153d372290ea5b3678 696 Gene3D G3DSA:2.170.130.10 18 159 1.4E-32 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS11960 03a76e9b4eec3dc3a05a55a8d0d29390 487 Gene3D G3DSA:3.30.2010.10 67 154 6.4E-16 T 29-03-2018 AM460_RS11960 03a76e9b4eec3dc3a05a55a8d0d29390 487 Pfam PF14559 Tetratricopeptide repeat 354 418 2.4E-10 T 29-03-2018 AM460_RS11960 03a76e9b4eec3dc3a05a55a8d0d29390 487 Gene3D G3DSA:1.25.20.10 284 484 5.3E-15 T 29-03-2018 AM460_RS11960 03a76e9b4eec3dc3a05a55a8d0d29390 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 42.73 T 29-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AM460_RS11960 03a76e9b4eec3dc3a05a55a8d0d29390 487 SUPERFAMILY SSF48452 313 428 1.52E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11960 03a76e9b4eec3dc3a05a55a8d0d29390 487 Pfam PF01435 Peptidase family M48 72 259 3.6E-26 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM460_RS11540 46cfcbcb2d4e73573ce5fd6c23b63291 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 1.8E-32 T 29-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC AM460_RS11540 46cfcbcb2d4e73573ce5fd6c23b63291 159 PIRSF PIRSF004923 1 150 4.3E-44 T 29-03-2018 IPR026268 Protein RseC AM460_RS27410 dc1d9df901a78e3a38700976de7d6e7c 248 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 25 247 5.8E-125 T 29-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX AM460_RS27410 dc1d9df901a78e3a38700976de7d6e7c 248 Pfam PF05857 TraX protein 32 246 3.6E-54 T 29-03-2018 IPR008875 TraX AM460_RS15150 46c80cc7e19dda3da2a92398eac60e33 189 Pfam PF05565 Siphovirus Gp157 6 156 8.8E-30 T 29-03-2018 IPR008840 Siphovirus Gp157 AM460_RS21530 eb8536449a230a013d4672d1810fc0f8 382 Gene3D G3DSA:1.20.1250.20 190 380 9.4E-20 T 29-03-2018 AM460_RS21530 eb8536449a230a013d4672d1810fc0f8 382 SUPERFAMILY SSF103473 6 376 4.19E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS21530 eb8536449a230a013d4672d1810fc0f8 382 Pfam PF07690 Major Facilitator Superfamily 12 228 9.1E-15 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS21530 eb8536449a230a013d4672d1810fc0f8 382 Gene3D G3DSA:1.20.1250.20 3 189 9.4E-22 T 29-03-2018 AM460_RS21530 eb8536449a230a013d4672d1810fc0f8 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 36.558 T 29-03-2018 IPR023745 MSF-type transporter, YcaD AM460_RS10015 e41cf79bbd5fb69fb0007a3feff0392a 417 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.7E-50 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM460_RS10015 e41cf79bbd5fb69fb0007a3feff0392a 417 SUPERFAMILY SSF53187 188 284 9.73E-53 T 29-03-2018 AM460_RS10015 e41cf79bbd5fb69fb0007a3feff0392a 417 SUPERFAMILY SSF53187 331 407 9.73E-53 T 29-03-2018 AM460_RS10015 e41cf79bbd5fb69fb0007a3feff0392a 417 SMART SM00646 250 404 3.8E-68 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM460_RS10015 e41cf79bbd5fb69fb0007a3feff0392a 417 Gene3D G3DSA:3.40.630.40 187 409 1.6E-57 T 29-03-2018 AM460_RS10015 e41cf79bbd5fb69fb0007a3feff0392a 417 Pfam PF11741 AMIN domain 39 142 1.1E-26 T 29-03-2018 IPR021731 AMIN domain AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 Gene3D G3DSA:1.10.166.10 3 69 4.3E-29 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 SUPERFAMILY SSF51161 1 256 6.38E-81 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 Gene3D G3DSA:2.160.10.10 87 257 4.5E-36 T 29-03-2018 AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 6.2E-13 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.0E-164 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 5.2E-26 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM460_RS25480 f398bd7063a0157d76c2caf44bace3b9 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.68 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM460_RS07010 34993706ebe0cf3faeb4752b4f2c26f4 190 Gene3D G3DSA:3.90.870.10 1 188 6.5E-52 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS07010 34993706ebe0cf3faeb4752b4f2c26f4 190 SUPERFAMILY SSF55821 4 187 6.71E-56 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS07010 34993706ebe0cf3faeb4752b4f2c26f4 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.973 T 29-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AM460_RS07010 34993706ebe0cf3faeb4752b4f2c26f4 190 Pfam PF01300 Telomere recombination 16 189 8.7E-42 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 Gene3D G3DSA:3.30.43.10 14 107 4.5E-19 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 SUPERFAMILY SSF56176 21 231 5.14E-65 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 SUPERFAMILY SSF55103 204 474 8.5E-78 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 Gene3D G3DSA:1.10.45.10 432 470 5.9E-12 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 8.4E-192 T 29-03-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 470 4.4E-69 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 Pfam PF01565 FAD binding domain 56 194 3.2E-35 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM460_RS08695 a6902e424b44d52104c99133b0c8797d 499 Gene3D G3DSA:3.30.465.10 108 252 1.1E-37 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS28130 a57f77e793c271aa48f50ec8dc7ef3ba 119 Pfam PF10894 Protein of unknown function (DUF2689) 15 67 1.6E-14 T 29-03-2018 IPR024396 Conjugal transfer protein TrbD, putative AM460_RS28130 a57f77e793c271aa48f50ec8dc7ef3ba 119 ProDom PD027414 PLASMID TRBD ORFJ 17 75 7.0E-23 T 29-03-2018 IPR024396 Conjugal transfer protein TrbD, putative AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.3E-53 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 SUPERFAMILY SSF50104 2 114 5.52E-48 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 29-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.739 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 PIRSF PIRSF002191 1 115 1.3E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11350 f5a64710e99eaf586d30566f0129af5e 115 Pfam PF01245 Ribosomal protein L19 3 113 4.6E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SUPERFAMILY SSF56059 674 934 8.66E-105 T 29-03-2018 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Gene3D G3DSA:3.40.50.1380 928 1055 9.8E-29 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.208 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SMART SM01096 424 547 2.5E-73 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Gene3D G3DSA:3.40.50.20 539 655 4.4E-63 T 29-03-2018 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SUPERFAMILY SSF52335 938 1071 2.09E-35 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.4E-40 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Gene3D G3DSA:3.30.470.20 746 927 7.4E-44 T 29-03-2018 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.7E-77 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 1.1E-38 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SUPERFAMILY SSF48108 396 554 1.83E-52 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Gene3D G3DSA:3.30.470.20 119 403 5.6E-67 T 29-03-2018 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Gene3D G3DSA:3.30.1490.20 656 745 1.9E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SMART SM00851 956 1042 7.0E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Gene3D G3DSA:3.40.50.20 4 109 3.1E-40 T 29-03-2018 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-63 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.3E-63 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-63 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-63 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-63 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-63 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.3E-63 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SUPERFAMILY SSF52440 557 676 9.93E-50 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Gene3D G3DSA:1.10.1030.10 404 538 7.0E-53 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.377 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SUPERFAMILY SSF56059 128 401 4.24E-110 T 29-03-2018 AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 Pfam PF02142 MGS-like domain 957 1041 3.2E-18 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM460_RS26250 5d9be15449412b4f9064bfee23e51af3 1073 SUPERFAMILY SSF52440 1 127 2.73E-50 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS06625 6dec421aecff53c08f79dd15432e59cb 134 Pfam PF02566 OsmC-like protein 30 127 2.9E-19 T 29-03-2018 IPR003718 OsmC/Ohr family AM460_RS06625 6dec421aecff53c08f79dd15432e59cb 134 SUPERFAMILY SSF82784 1 132 1.96E-43 T 29-03-2018 IPR003718 OsmC/Ohr family AM460_RS06625 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:3.30.300.20 35 134 1.6E-20 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS06625 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:2.20.25.10 1 29 7.2E-15 T 29-03-2018 AM460_RS00385 fe24c727ca8caae7bd0b09dc704b73f3 245 Pfam PF01464 Transglycosylase SLT domain 97 193 4.6E-13 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS00385 fe24c727ca8caae7bd0b09dc704b73f3 245 Gene3D G3DSA:1.10.530.10 55 231 2.9E-27 T 29-03-2018 AM460_RS00385 fe24c727ca8caae7bd0b09dc704b73f3 245 SUPERFAMILY SSF53955 75 238 6.19E-33 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS00840 e450f73011ba4b46650cde7b5cfa5072 176 Pfam PF00419 Fimbrial protein 28 176 2.6E-21 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS00840 e450f73011ba4b46650cde7b5cfa5072 176 Gene3D G3DSA:2.60.40.1090 25 176 2.9E-36 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS00840 e450f73011ba4b46650cde7b5cfa5072 176 SUPERFAMILY SSF49401 26 176 7.95E-35 T 29-03-2018 IPR008966 Adhesion domain AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 PIRSF PIRSF001467 1 164 1.0E-28 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 Gene3D G3DSA:2.40.100.10 1 164 7.7E-53 T 29-03-2018 IPR029000 Cyclophilin-like domain AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 SUPERFAMILY SSF50891 1 162 7.6E-60 T 29-03-2018 IPR029000 Cyclophilin-like domain AM460_RS23700 ecb84c28e798fa43f794edb97129bc6d 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 5.1E-48 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS24080 d38608c8a079bfaa010cb38db9c1522d 516 Pfam PF12792 CSS motif domain associated with EAL 39 242 8.0E-45 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM460_RS24080 d38608c8a079bfaa010cb38db9c1522d 516 SMART SM00052 267 507 1.3E-112 T 29-03-2018 IPR001633 EAL domain AM460_RS24080 d38608c8a079bfaa010cb38db9c1522d 516 Pfam PF00563 EAL domain 274 501 5.2E-66 T 29-03-2018 IPR001633 EAL domain AM460_RS24080 d38608c8a079bfaa010cb38db9c1522d 516 SUPERFAMILY SSF141868 273 514 4.45E-75 T 29-03-2018 IPR001633 EAL domain AM460_RS24080 d38608c8a079bfaa010cb38db9c1522d 516 Gene3D G3DSA:3.20.20.450 269 516 9.8E-82 T 29-03-2018 IPR001633 EAL domain AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 4 365 40.239 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 Pfam PF02119 Flagellar P-ring protein 21 364 1.3E-137 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS20165 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 7.8E-94 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM460_RS04125 0821da3b1e15e57c130fe7e2bf1d8d30 235 Gene3D G3DSA:3.30.450.40 49 230 4.0E-4 T 29-03-2018 IPR029016 GAF domain-like AM460_RS04125 0821da3b1e15e57c130fe7e2bf1d8d30 235 Pfam PF04340 Protein of unknown function, DUF484 11 232 9.2E-89 T 29-03-2018 IPR007435 Protein of unknown function DUF484 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 3.9E-47 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 SUPERFAMILY SSF46548 336 444 6.8E-20 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 6.8E-33 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 Gene3D G3DSA:3.30.70.20 384 485 9.7E-17 T 29-03-2018 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 Pfam PF10531 SLBB domain 296 344 4.8E-12 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 717 268.709 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 Gene3D G3DSA:3.30.70.20 283 383 0.011 T 29-03-2018 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 SUPERFAMILY SSF142019 94 303 5.1E-61 T 29-03-2018 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 1.2E-179 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM460_RS16925 ed4c6efe19d0afe555b7ff12b779f8af 806 Pfam PF12838 4Fe-4S dicluster domain 376 430 1.3E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 Gene3D G3DSA:2.30.42.10 246 329 1.6E-15 T 29-03-2018 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 Pfam PF03572 Peptidase family S41 356 529 1.8E-53 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 SUPERFAMILY SSF50156 219 345 6.03E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 667 2.2E-39 T 29-03-2018 IPR020992 Tail specific protease, C-terminal AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 Gene3D G3DSA:3.30.750.44 155 245 7.2E-21 T 29-03-2018 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 SMART SM00228 246 323 1.1E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 6.2E-131 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 SMART SM00245 326 531 5.2E-82 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 SUPERFAMILY SSF52096 194 264 1.51E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 SUPERFAMILY SSF52096 350 537 1.51E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 6.1E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS15830 3c4be6edb9b9baaafb446c357176614d 682 Gene3D G3DSA:3.90.226.10 330 595 2.0E-59 T 29-03-2018 AM460_RS04340 1d3a670d1bfad1175025fba33bbc4a4c 309 Pfam PF01063 Amino-transferase class IV 36 268 6.1E-51 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM460_RS04340 1d3a670d1bfad1175025fba33bbc4a4c 309 SUPERFAMILY SSF56752 7 308 1.31E-105 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM460_RS04340 1d3a670d1bfad1175025fba33bbc4a4c 309 Gene3D G3DSA:3.30.470.10 1 142 5.5E-43 T 29-03-2018 AM460_RS04340 1d3a670d1bfad1175025fba33bbc4a4c 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM460_RS04340 1d3a670d1bfad1175025fba33bbc4a4c 309 Gene3D G3DSA:3.20.10.10 143 303 3.0E-51 T 29-03-2018 AM460_RS04340 1d3a670d1bfad1175025fba33bbc4a4c 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 6.9E-148 T 29-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 SUPERFAMILY SSF63380 3 97 4.12E-23 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 2.0E-6 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 Gene3D G3DSA:2.40.30.10 2 98 1.2E-17 T 29-03-2018 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.1E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 1.1E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.1E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 1.1E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.1E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 SUPERFAMILY SSF52343 100 231 2.88E-36 T 29-03-2018 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 Gene3D G3DSA:3.40.50.80 99 233 9.6E-25 T 29-03-2018 AM460_RS03870 b6cb369f06acaecc00322377c74e9f11 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 3.4E-23 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM460_RS16910 86a49db5d468041b1a18a238cad5ecd0 231 PIRSF PIRSF006102 1 219 2.0E-79 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM460_RS16910 86a49db5d468041b1a18a238cad5ecd0 231 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.312 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM460_RS16910 86a49db5d468041b1a18a238cad5ecd0 231 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 7.9E-62 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM460_RS16910 86a49db5d468041b1a18a238cad5ecd0 231 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 4.4E-81 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM460_RS06570 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 7.6E-40 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM460_RS06570 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 SUPERFAMILY SSF50022 1 107 3.93E-35 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM460_RS06570 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 5.3E-41 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM460_RS06570 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 Gene3D G3DSA:2.102.10.10 1 108 4.8E-17 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 SUPERFAMILY SSF53187 10 185 7.54E-54 T 29-03-2018 AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 SUPERFAMILY SSF53187 316 399 7.54E-54 T 29-03-2018 AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 Gene3D G3DSA:3.40.630.10 7 287 5.6E-49 T 29-03-2018 AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 SUPERFAMILY SSF55031 186 282 4.64E-13 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 Pfam PF07687 Peptidase dimerisation domain 183 282 2.9E-17 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 Pfam PF01546 Peptidase family M20/M25/M40 78 395 1.4E-23 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM460_RS09825 56ef52fc84e708556588dd43eb465591 403 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 8 400 5.5E-218 T 29-03-2018 IPR017706 Peptidase M20/DapE, YgeY AM460_RS22190 d26d63da030fecef8ddd92f6f9e299f3 220 SUPERFAMILY SSF51569 1 216 5.5E-62 T 29-03-2018 AM460_RS22190 d26d63da030fecef8ddd92f6f9e299f3 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 8.8E-85 T 29-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM460_RS22190 d26d63da030fecef8ddd92f6f9e299f3 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 205 7.2E-44 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS22190 d26d63da030fecef8ddd92f6f9e299f3 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS22190 d26d63da030fecef8ddd92f6f9e299f3 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 51.017 T 29-03-2018 IPR023001 Fructose-6-phosphate aldolase GO:0016832 AM460_RS22190 d26d63da030fecef8ddd92f6f9e299f3 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS22190 d26d63da030fecef8ddd92f6f9e299f3 220 Gene3D G3DSA:3.20.20.70 1 220 2.2E-56 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS06520 fb0526c8bd23ed8050ed6a505eeb00a9 120 SUPERFAMILY SSF63520 15 111 7.32E-7 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS06520 fb0526c8bd23ed8050ed6a505eeb00a9 120 Gene3D G3DSA:1.10.1790.10 5 112 1.1E-6 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS20505 d4f3cd3a4d592ff96262ade1a48ef320 230 SUPERFAMILY SSF52499 5 221 1.57E-57 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS20505 d4f3cd3a4d592ff96262ade1a48ef320 230 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 1 228 61.041 T 29-03-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 AM460_RS20505 d4f3cd3a4d592ff96262ade1a48ef320 230 Gene3D G3DSA:3.40.50.850 2 227 1.1E-52 T 29-03-2018 AM460_RS20505 d4f3cd3a4d592ff96262ade1a48ef320 230 Pfam PF00857 Isochorismatase family 18 215 1.5E-41 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS20505 d4f3cd3a4d592ff96262ade1a48ef320 230 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 3 226 1.6E-138 T 29-03-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 AM460_RS18155 8363268fa7b8ab3c96eca838750c1a4c 330 Pfam PF00005 ABC transporter 24 187 1.4E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS18155 8363268fa7b8ab3c96eca838750c1a4c 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.2E-17 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS18155 8363268fa7b8ab3c96eca838750c1a4c 330 SUPERFAMILY SSF52540 3 264 3.03E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18155 8363268fa7b8ab3c96eca838750c1a4c 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.9E-20 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS18155 8363268fa7b8ab3c96eca838750c1a4c 330 Gene3D G3DSA:3.40.50.300 1 329 1.8E-55 T 29-03-2018 AM460_RS18155 8363268fa7b8ab3c96eca838750c1a4c 330 SMART SM00382 32 235 2.5E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS03080 7cae396dade38dada5e1f6f4c4157997 211 Gene3D G3DSA:3.20.20.70 14 206 3.4E-40 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03080 7cae396dade38dada5e1f6f4c4157997 211 SUPERFAMILY SSF51391 6 205 3.92E-64 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS03080 7cae396dade38dada5e1f6f4c4157997 211 Pfam PF02581 Thiamine monophosphate synthase 20 189 1.8E-56 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS03080 7cae396dade38dada5e1f6f4c4157997 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 20.001 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS03080 7cae396dade38dada5e1f6f4c4157997 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 3.0E-59 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS26695 e6a2c5d9b1cb717b6685bb15799be005 69 Pfam PF13646 HEAT repeats 12 67 5.6E-8 T 29-03-2018 AM460_RS26695 e6a2c5d9b1cb717b6685bb15799be005 69 Gene3D G3DSA:1.25.40.70 2 69 2.9E-6 T 29-03-2018 AM460_RS26695 e6a2c5d9b1cb717b6685bb15799be005 69 SUPERFAMILY SSF48371 11 67 6.62E-7 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 AM460_RS15165 77205be94cf0403c4e04ce1445522978 137 Pfam PF01381 Helix-turn-helix 14 64 1.1E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS15165 77205be94cf0403c4e04ce1445522978 137 SUPERFAMILY SSF47413 5 71 3.84E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS15165 77205be94cf0403c4e04ce1445522978 137 SMART SM00530 13 67 2.9E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS15165 77205be94cf0403c4e04ce1445522978 137 Gene3D G3DSA:1.10.260.40 1 137 7.9E-18 T 29-03-2018 AM460_RS03380 90f3df42f88b9bde2fe54910db1a1dd6 386 Gene3D G3DSA:3.40.640.10 1 247 5.7E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS03380 90f3df42f88b9bde2fe54910db1a1dd6 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 1.2E-212 T 29-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AM460_RS03380 90f3df42f88b9bde2fe54910db1a1dd6 386 Gene3D G3DSA:3.90.1150.10 248 386 2.9E-48 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS03380 90f3df42f88b9bde2fe54910db1a1dd6 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 1.3E-141 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM460_RS03380 90f3df42f88b9bde2fe54910db1a1dd6 386 PIRSF PIRSF001434 1 384 3.0E-130 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM460_RS03380 90f3df42f88b9bde2fe54910db1a1dd6 386 SUPERFAMILY SSF53383 5 381 5.01E-119 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS03380 90f3df42f88b9bde2fe54910db1a1dd6 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM460_RS03680 2ab67f99e9eac535d94aa6e882142578 290 Pfam PF03631 Virulence factor BrkB 29 274 5.5E-57 T 29-03-2018 IPR017039 Virulence factor BrkB AM460_RS03680 2ab67f99e9eac535d94aa6e882142578 290 PIRSF PIRSF035875 2 290 1.5E-73 T 29-03-2018 IPR017039 Virulence factor BrkB AM460_RS03680 2ab67f99e9eac535d94aa6e882142578 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 281 23.458 T 29-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AM460_RS03680 2ab67f99e9eac535d94aa6e882142578 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 3.0E-106 T 29-03-2018 IPR017039 Virulence factor BrkB AM460_RS17340 d5468afd0ee0b2126f17549707176db9 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 3.8E-85 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM460_RS17340 d5468afd0ee0b2126f17549707176db9 483 Gene3D G3DSA:3.40.50.720 1 268 7.2E-63 T 29-03-2018 AM460_RS17340 d5468afd0ee0b2126f17549707176db9 483 SUPERFAMILY SSF51735 2 264 2.87E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17340 d5468afd0ee0b2126f17549707176db9 483 Gene3D G3DSA:1.10.1040.10 272 483 2.1E-61 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS17340 d5468afd0ee0b2126f17549707176db9 483 SUPERFAMILY SSF48179 273 482 4.42E-53 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS17340 d5468afd0ee0b2126f17549707176db9 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 57.787 T 29-03-2018 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 AM460_RS17340 d5468afd0ee0b2126f17549707176db9 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 2.2E-41 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM460_RS09415 d3f4a81e1ecf0eb29709388199333600 235 Pfam PF04231 Endonuclease I 45 229 1.7E-45 T 29-03-2018 IPR007346 Endonuclease I GO:0004518 AM460_RS09415 d3f4a81e1ecf0eb29709388199333600 235 SUPERFAMILY SSF54060 26 230 4.12E-89 T 29-03-2018 AM460_RS13070 0ae594d575c25882758aea56eb0b379e 141 Hamap MF_01846 Nucleoside triphosphatase NudI [nudI]. 1 141 51.571 T 29-03-2018 IPR023781 Nucleoside triphosphatase NudI GO:0016818 KEGG: 00240+3.6.1.23+3.6.1.12 AM460_RS13070 0ae594d575c25882758aea56eb0b379e 141 SUPERFAMILY SSF55811 2 126 7.72E-26 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS13070 0ae594d575c25882758aea56eb0b379e 141 Gene3D G3DSA:3.90.79.10 1 140 5.1E-28 T 29-03-2018 AM460_RS13070 0ae594d575c25882758aea56eb0b379e 141 Pfam PF00293 NUDIX domain 2 135 6.8E-21 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS13070 0ae594d575c25882758aea56eb0b379e 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS13070 0ae594d575c25882758aea56eb0b379e 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS13070 0ae594d575c25882758aea56eb0b379e 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 Gene3D G3DSA:4.10.520.10 1 99 2.4E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 SMART SM00411 3 92 1.2E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS16465 59ec5d46b9f3ed5fc9297c10221bdeba 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM460_RS16105 acca6325d1d2cdeab1f6106e3f4038c3 137 SUPERFAMILY SSF51316 5 133 1.99E-59 T 29-03-2018 IPR011057 Mss4-like AM460_RS16105 acca6325d1d2cdeab1f6106e3f4038c3 137 Pfam PF01641 SelR domain 9 127 1.8E-54 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM460_RS16105 acca6325d1d2cdeab1f6106e3f4038c3 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 38.685 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM460_RS16105 acca6325d1d2cdeab1f6106e3f4038c3 137 Gene3D G3DSA:2.170.150.20 1 136 1.4E-58 T 29-03-2018 AM460_RS16105 acca6325d1d2cdeab1f6106e3f4038c3 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 136 3.3E-68 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM460_RS25825 7403c6671aac6a7cfcdab5ea329bc1c5 457 PIRSF PIRSF006060 1 453 2.5E-81 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS25825 7403c6671aac6a7cfcdab5ea329bc1c5 457 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS25825 7403c6671aac6a7cfcdab5ea329bc1c5 457 Pfam PF00324 Amino acid permease 19 454 5.6E-132 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.2E-212 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 4.7E-82 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.0E-12 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 Gene3D G3DSA:2.40.50.140 8 106 1.2E-17 T 29-03-2018 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 SUPERFAMILY SSF50249 16 101 1.82E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.336 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 Gene3D G3DSA:3.30.930.10 126 466 5.9E-94 T 29-03-2018 AM460_RS20860 0546cf98ce1afe9f3a8cf8a8c29f7383 466 SUPERFAMILY SSF55681 99 464 1.08E-95 T 29-03-2018 AM460_RS15860 7f0d0bca562eeaf47b0b6aa2a0147d5b 95 Pfam PF13974 YebO-like protein 16 95 8.7E-33 T 29-03-2018 IPR025594 YebO-like protein AM460_RS21710 a7245c46ede08edb0354c35d538bf6b5 625 Gene3D G3DSA:3.40.50.1110 72 397 8.3E-36 T 29-03-2018 AM460_RS21710 a7245c46ede08edb0354c35d538bf6b5 625 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 75 272 1.4E-11 T 29-03-2018 IPR005181 Sialate O-acetylesterase domain AM460_RS21710 a7245c46ede08edb0354c35d538bf6b5 625 SUPERFAMILY SSF52266 72 330 2.84E-43 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS21710 a7245c46ede08edb0354c35d538bf6b5 625 SUPERFAMILY SSF52266 364 454 2.84E-43 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS21710 a7245c46ede08edb0354c35d538bf6b5 625 Pfam PF08410 Domain of unknown function (DUF1737) 4 53 8.3E-8 T 29-03-2018 IPR013619 Domain of unknown function DUF1737 AM460_RS14705 d71a4ccf84ab44f7ed8aa51e2ba23920 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 4.0E-161 T 29-03-2018 IPR010091 Thiazolinyl imide reductase AM460_RS14705 d71a4ccf84ab44f7ed8aa51e2ba23920 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 5.6E-24 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM460_RS14705 d71a4ccf84ab44f7ed8aa51e2ba23920 366 SUPERFAMILY SSF51735 9 143 4.4E-14 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14705 d71a4ccf84ab44f7ed8aa51e2ba23920 366 Gene3D G3DSA:3.40.50.720 2 145 4.0E-14 T 29-03-2018 AM460_RS14705 d71a4ccf84ab44f7ed8aa51e2ba23920 366 PIRSF PIRSF017494 4 363 2.9E-153 T 29-03-2018 IPR010091 Thiazolinyl imide reductase AM460_RS14705 d71a4ccf84ab44f7ed8aa51e2ba23920 366 Gene3D G3DSA:3.30.360.10 146 284 5.0E-46 T 29-03-2018 AM460_RS08280 4010cfb3ebc684d824701f08838ee0f5 187 Gene3D G3DSA:2.60.40.1090 32 187 3.1E-33 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS08280 4010cfb3ebc684d824701f08838ee0f5 187 Pfam PF00419 Fimbrial protein 34 187 3.0E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS08280 4010cfb3ebc684d824701f08838ee0f5 187 SUPERFAMILY SSF49401 33 187 4.77E-34 T 29-03-2018 IPR008966 Adhesion domain AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 253 3.9E-63 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 SUPERFAMILY SSF53067 258 498 9.58E-57 T 29-03-2018 AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 SUPERFAMILY SSF53067 8 253 7.43E-73 T 29-03-2018 AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 PIRSF PIRSF000538 6 504 2.5E-123 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 453 1.4E-40 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 Gene3D G3DSA:3.30.420.40 3 249 7.8E-68 T 29-03-2018 AM460_RS23510 d4747d3d4f26d218ea9dbeeb7ceeb5d1 506 Gene3D G3DSA:3.30.420.40 250 501 7.3E-55 T 29-03-2018 AM460_RS22310 abff3b4bc0880312dc5caa4a683d877d 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 8.4E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS22310 abff3b4bc0880312dc5caa4a683d877d 86 Gene3D G3DSA:3.30.1660.10 22 86 1.4E-21 T 29-03-2018 IPR025543 Dodecin-like AM460_RS22310 abff3b4bc0880312dc5caa4a683d877d 86 SUPERFAMILY SSF159871 3 86 4.71E-25 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS16575 8e5691e64a8db12e1a1b740a3bb3c27b 288 Gene3D G3DSA:3.40.50.720 117 286 1.6E-31 T 29-03-2018 AM460_RS16575 8e5691e64a8db12e1a1b740a3bb3c27b 288 Hamap MF_01578 Quinate/shikimate dehydrogenase [ydiB]. 1 288 82.267 T 29-03-2018 IPR022872 Quinate/Shikimate dehydrogenase GO:0004764|GO:0030266|GO:0052733|GO:0052734|GO:0055114 KEGG: 00400+1.1.1.282|KEGG: 00620+1.1.1.28|MetaCyc: PWY-6163|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM460_RS16575 8e5691e64a8db12e1a1b740a3bb3c27b 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 286 30.44 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM460_RS16575 8e5691e64a8db12e1a1b740a3bb3c27b 288 Gene3D G3DSA:3.40.50.10860 1 116 3.4E-37 T 29-03-2018 AM460_RS16575 8e5691e64a8db12e1a1b740a3bb3c27b 288 SUPERFAMILY SSF53223 4 106 5.64E-30 T 29-03-2018 AM460_RS16575 8e5691e64a8db12e1a1b740a3bb3c27b 288 SUPERFAMILY SSF51735 107 283 2.63E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16575 8e5691e64a8db12e1a1b740a3bb3c27b 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 1.1E-26 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM460_RS08555 c5262ce048e3804945848cc57953368f 308 SUPERFAMILY SSF53474 83 307 1.36E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS08555 c5262ce048e3804945848cc57953368f 308 Pfam PF01738 Dienelactone hydrolase family 98 306 2.1E-50 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM460_RS08555 c5262ce048e3804945848cc57953368f 308 Gene3D G3DSA:3.40.50.1820 78 306 1.0E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS01700 71a0a0f7f1fb78a0584699714d5fb41e 425 SUPERFAMILY SSF103473 4 412 8.63E-85 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS01700 71a0a0f7f1fb78a0584699714d5fb41e 425 Gene3D G3DSA:1.20.1250.20 1 202 2.9E-43 T 29-03-2018 AM460_RS01700 71a0a0f7f1fb78a0584699714d5fb41e 425 Pfam PF07690 Major Facilitator Superfamily 15 323 2.6E-52 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS01700 71a0a0f7f1fb78a0584699714d5fb41e 425 Gene3D G3DSA:1.20.1250.20 214 422 6.5E-24 T 29-03-2018 AM460_RS01700 71a0a0f7f1fb78a0584699714d5fb41e 425 PIRSF PIRSF002808 1 424 2.4E-43 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS06315 0470ee2b2a65e9df0479e0c8bd1e0c1b 694 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 100 685 7.7E-302 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM460_RS06315 0470ee2b2a65e9df0479e0c8bd1e0c1b 694 SUPERFAMILY SSF51445 142 570 1.52E-146 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS06315 0470ee2b2a65e9df0479e0c8bd1e0c1b 694 SUPERFAMILY SSF51445 608 681 1.52E-146 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS06315 0470ee2b2a65e9df0479e0c8bd1e0c1b 694 Pfam PF02446 4-alpha-glucanotransferase 148 664 4.1E-130 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM460_RS06315 0470ee2b2a65e9df0479e0c8bd1e0c1b 694 Gene3D G3DSA:3.20.20.80 138 686 4.7E-154 T 29-03-2018 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 SMART SM00388 236 302 8.1E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 Gene3D G3DSA:3.30.565.10 306 449 7.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 SUPERFAMILY SSF55874 291 447 2.49E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 Gene3D G3DSA:1.10.287.130 226 298 5.5E-12 T 29-03-2018 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 442 5.5E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 SUPERFAMILY SSF47384 219 301 1.96E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 158 3.3E-8 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 3.5E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 3.5E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 3.7E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 Gene3D G3DSA:1.20.5.1040 129 183 2.8E-14 T 29-03-2018 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 Gene3D G3DSA:1.20.5.1040 7 58 6.5E-11 T 29-03-2018 AM460_RS08410 dc8e10def5a971b629084fccb8d67de6 449 SMART SM00387 348 449 1.6E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02755 1c6df200f11ed98ffe1c14281172482b 171 Pfam PF01475 Ferric uptake regulator family 20 138 4.2E-15 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM460_RS02755 1c6df200f11ed98ffe1c14281172482b 171 SUPERFAMILY SSF46785 12 144 8.75E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02755 1c6df200f11ed98ffe1c14281172482b 171 Gene3D G3DSA:1.10.10.10 1 92 4.6E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12305 b8bdea31c2cf66019b18d6f8739081a3 52 TIGRFAM TIGR03510 XapX: XapX domain 4 50 1.5E-18 T 29-03-2018 IPR020017 XapX domain AM460_RS06125 0aa5e5a695bebe4d1e4ac88658d88934 308 Gene3D G3DSA:1.10.3470.10 4 299 6.1E-52 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS06125 0aa5e5a695bebe4d1e4ac88658d88934 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 9.7E-71 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 3.8E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 Pfam PF07694 5TMR of 5TMR-LYT 29 192 4.0E-43 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 Pfam PF06580 Histidine kinase 359 438 2.4E-24 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 SUPERFAMILY SSF55874 414 551 1.31E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 SMART SM00387 452 554 3.5E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 Gene3D G3DSA:3.30.450.40 191 335 5.8E-6 T 29-03-2018 IPR029016 GAF domain-like AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 SUPERFAMILY SSF55781 226 345 1.99E-7 T 29-03-2018 IPR029016 GAF domain-like AM460_RS12425 ca2322f37959d309ac15c83c1c3d6764 565 Gene3D G3DSA:3.30.565.10 336 552 1.6E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 3.3E-7 T 29-03-2018 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 38.019 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 SUPERFAMILY SSF102114 5 290 1.44E-71 T 29-03-2018 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 8.1E-40 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 2.3E-111 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 SMART SM00729 14 222 2.2E-6 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 Pfam PF04055 Radical SAM superfamily 19 181 8.2E-29 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AM460_RS22415 d3ae2d77a8c8985e3fa15c50000660fe 329 Gene3D G3DSA:3.20.20.70 1 329 1.4E-72 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS27475 83c8883348a0f2ca7913e1c00ffca8c7 257 Pfam PF13728 F plasmid transfer operon protein 33 246 1.8E-67 T 29-03-2018 AM460_RS27475 83c8883348a0f2ca7913e1c00ffca8c7 257 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 13 256 1.7E-101 T 29-03-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF AM460_RS27475 83c8883348a0f2ca7913e1c00ffca8c7 257 Gene3D G3DSA:3.40.30.10 131 255 2.8E-4 T 29-03-2018 AM460_RS13640 7927ac49e2e617e4dd7eeba15d52bc70 79 ProDom PD058881 MEMBRANE TRANSMEMBRANE YEIS INNER 1 79 1.0E-32 T 29-03-2018 IPR020155 Uncharacterised protein family YeiS GO:0016021 AM460_RS13640 7927ac49e2e617e4dd7eeba15d52bc70 79 Pfam PF10808 Protein of unknown function (DUF2542) 1 79 6.7E-46 T 29-03-2018 IPR020155 Uncharacterised protein family YeiS GO:0016021 AM460_RS16485 967159599024adac2179f56d77626ddc 154 Gene3D G3DSA:3.90.1720.10 35 154 2.1E-35 T 29-03-2018 AM460_RS16485 967159599024adac2179f56d77626ddc 154 SUPERFAMILY SSF54001 34 154 3.07E-39 T 29-03-2018 AM460_RS16485 967159599024adac2179f56d77626ddc 154 Pfam PF00877 NlpC/P60 family 47 153 5.9E-31 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM460_RS16570 2430db0e67ee8cbbeb6c0d725090a453 252 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 41.568 T 29-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM460_RS16570 2430db0e67ee8cbbeb6c0d725090a453 252 Gene3D G3DSA:3.20.20.70 1 252 5.2E-84 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS16570 2430db0e67ee8cbbeb6c0d725090a453 252 SUPERFAMILY SSF51569 1 251 1.1E-82 T 29-03-2018 AM460_RS16570 2430db0e67ee8cbbeb6c0d725090a453 252 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 1.0E-87 T 29-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM460_RS16570 2430db0e67ee8cbbeb6c0d725090a453 252 Pfam PF01487 Type I 3-dehydroquinase 20 246 4.5E-70 T 29-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM460_RS16570 2430db0e67ee8cbbeb6c0d725090a453 252 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 29-03-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM460_RS21410 6eb5c6dd05a23319a930927c63b28336 165 SUPERFAMILY SSF53955 7 162 6.75E-46 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS21410 6eb5c6dd05a23319a930927c63b28336 165 Hamap MF_04109 Endolysin. 1 165 38.442 T 29-03-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 AM460_RS21410 6eb5c6dd05a23319a930927c63b28336 165 Pfam PF00959 Phage lysozyme 34 152 2.4E-20 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM460_RS21410 6eb5c6dd05a23319a930927c63b28336 165 Gene3D G3DSA:1.10.530.10 3 165 4.0E-47 T 29-03-2018 AM460_RS17985 3e9b671d9154a12a4ade527869bef31d 537 Gene3D G3DSA:3.40.190.10 205 300 1.8E-22 T 29-03-2018 AM460_RS17985 3e9b671d9154a12a4ade527869bef31d 537 SUPERFAMILY SSF53850 32 528 3.33E-140 T 29-03-2018 AM460_RS17985 3e9b671d9154a12a4ade527869bef31d 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 453 7.6E-88 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS17985 3e9b671d9154a12a4ade527869bef31d 537 Gene3D G3DSA:3.90.76.10 44 204 1.9E-39 T 29-03-2018 AM460_RS17985 3e9b671d9154a12a4ade527869bef31d 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM460_RS17985 3e9b671d9154a12a4ade527869bef31d 537 Gene3D G3DSA:3.10.105.10 301 506 3.7E-59 T 29-03-2018 AM460_RS17985 3e9b671d9154a12a4ade527869bef31d 537 PIRSF PIRSF002741 2 537 4.9E-113 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 SUPERFAMILY SSF51206 23 162 1.27E-31 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 SUPERFAMILY SSF46785 165 246 2.11E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 SMART SM00419 187 235 2.8E-13 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 Gene3D G3DSA:2.60.120.10 24 165 1.9E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 SMART SM00100 30 151 2.9E-22 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 3.2E-16 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 Gene3D G3DSA:1.10.10.10 166 250 2.5E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM460_RS17965 1292da009aa32cef15c5f4f65ad64f77 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.0E-15 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.437 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 Gene3D G3DSA:4.10.520.10 1 94 5.1E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 SMART SM00411 1 91 1.6E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.6E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 SUPERFAMILY SSF47729 1 91 6.92E-30 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS20960 2e51831bd5af44198685ea29ced2c512 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 6.3E-54 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 Pfam PF16359 RcsD-ABL domain 688 789 1.0E-39 T 29-03-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 SMART SM00387 565 678 6.6E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 Gene3D G3DSA:1.20.120.160 775 890 1.2E-14 T 29-03-2018 AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 890 24.822 T 29-03-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 SUPERFAMILY SSF47226 803 889 1.7E-21 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 Pfam PF01627 Hpt domain 811 868 3.3E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 Gene3D G3DSA:3.30.565.10 522 687 3.6E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 SUPERFAMILY SSF55874 517 677 3.01E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13240 207f08ca5bd9298f4b0bed568e6bb64a 890 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 675 9.5E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS14485 8d9a57d678e6196688e55cbf6635a08e 66 Gene3D G3DSA:2.20.20.30 2 29 2.2E-4 T 29-03-2018 AM460_RS02000 2c2a061909908951567fd43cc9e77344 377 ProSitePatterns PS00336 Beta-lactamase class-C active site. 76 83 - T 29-03-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 AM460_RS02000 2c2a061909908951567fd43cc9e77344 377 Pfam PF00144 Beta-lactamase 30 376 1.3E-88 T 29-03-2018 IPR001466 Beta-lactamase-related AM460_RS02000 2c2a061909908951567fd43cc9e77344 377 Gene3D G3DSA:3.40.710.10 18 377 1.2E-76 T 29-03-2018 AM460_RS02000 2c2a061909908951567fd43cc9e77344 377 SUPERFAMILY SSF56601 22 376 1.0E-104 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS10335 fa13ef857588d93b614c077236632cd9 446 Gene3D G3DSA:3.30.390.10 1 140 3.5E-29 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10335 fa13ef857588d93b614c077236632cd9 446 SUPERFAMILY SSF51604 139 415 7.6E-81 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS10335 fa13ef857588d93b614c077236632cd9 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 1.1E-36 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS10335 fa13ef857588d93b614c077236632cd9 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 6.9E-271 T 29-03-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 AM460_RS10335 fa13ef857588d93b614c077236632cd9 446 SUPERFAMILY SSF54826 8 137 6.89E-30 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10335 fa13ef857588d93b614c077236632cd9 446 SMART SM00922 185 285 2.7E-15 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM460_RS10335 fa13ef857588d93b614c077236632cd9 446 Gene3D G3DSA:3.20.20.120 141 413 2.6E-47 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS24155 4293209b0b111eb737937d508e3da02c 123 SMART SM00278 101 120 19.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS24155 4293209b0b111eb737937d508e3da02c 123 SMART SM00278 71 90 80.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS24155 4293209b0b111eb737937d508e3da02c 123 Pfam PF12836 Helix-hairpin-helix motif 60 117 5.0E-19 T 29-03-2018 AM460_RS24155 4293209b0b111eb737937d508e3da02c 123 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 55 123 5.4E-38 T 29-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AM460_RS24155 4293209b0b111eb737937d508e3da02c 123 Gene3D G3DSA:1.10.150.310 80 123 2.1E-13 T 29-03-2018 AM460_RS24155 4293209b0b111eb737937d508e3da02c 123 SUPERFAMILY SSF47781 44 119 7.67E-24 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS24155 4293209b0b111eb737937d508e3da02c 123 Gene3D G3DSA:1.10.150.20 23 79 3.4E-7 T 29-03-2018 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Gene3D G3DSA:2.40.50.100 907 1021 2.0E-27 T 29-03-2018 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Gene3D G3DSA:2.40.50.100 1022 1126 1.3E-12 T 29-03-2018 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 19.054 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 SMART SM00663 235 514 1.1E-184 T 29-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 5.6E-78 T 29-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 7.3E-90 T 29-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Gene3D G3DSA:2.40.40.20 346 488 7.3E-40 T 29-03-2018 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.9E-18 T 29-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.5E-27 T 29-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 29-03-2018 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 SUPERFAMILY SSF64484 16 944 0.0 T 29-03-2018 AM460_RS03105 7ddc16d3174f450041944c158e8d3968 1407 Gene3D G3DSA:2.40.50.100 1153 1213 3.6E-15 T 29-03-2018 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 Gene3D G3DSA:1.25.40.10 37 523 6.0E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 SMART SM00028 98 131 0.0059 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 Gene3D G3DSA:2.40.160.20 597 807 0.31 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 SUPERFAMILY SSF48452 92 189 2.11E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 SUPERFAMILY SSF48452 430 503 2.11E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 SUPERFAMILY SSF48452 43 171 2.11E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 SUPERFAMILY SSF48452 250 341 2.11E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS20430 9b7c7ecefa4ae7a0d91755d6695aec54 807 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 807 1.3E-290 T 29-03-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PIRSF PIRSF001480 1 391 2.7E-113 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 Gene3D G3DSA:2.60.120.10 1 295 1.1E-77 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 4.3E-74 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 2.4E-122 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 384 3.4E-144 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 Gene3D G3DSA:2.60.120.10 296 391 8.2E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS17015 85c2860cb6cb006030c6d95554d43bd4 391 SUPERFAMILY SSF51182 1 375 2.92E-101 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 SUPERFAMILY SSF74650 375 853 3.77E-66 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 SUPERFAMILY SSF88688 286 378 7.19E-8 T 29-03-2018 IPR028995 Glycoside hydrolase families 57/38, central domain AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 Pfam PF09261 Alpha mannosidase middle domain 280 355 4.0E-7 T 29-03-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 Gene3D G3DSA:2.60.40.1180 371 504 4.2E-15 T 29-03-2018 AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 Gene3D G3DSA:1.20.1270.50 284 370 1.4E-16 T 29-03-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 Gene3D G3DSA:3.20.110.10 2 253 4.8E-55 T 29-03-2018 IPR027291 Glycoside hydrolase 38/57, N-terminal domain AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 7 268 7.8E-40 T 29-03-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 SUPERFAMILY SSF88713 6 272 1.33E-53 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 SMART SM00872 279 357 8.3E-18 T 29-03-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 AM460_RS22690 6af524e0fdd3df0919fde368f896a880 877 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 386 844 3.2E-27 T 29-03-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 50.549 T 29-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 Pfam PF00271 Helicase conserved C-terminal domain 236 343 8.5E-29 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 Pfam PF00270 DEAD/DEAH box helicase 28 197 1.6E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 SMART SM00490 262 343 7.5E-31 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 Gene3D G3DSA:3.40.50.300 1 225 1.3E-59 T 29-03-2018 AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 Gene3D G3DSA:3.40.50.300 226 441 9.7E-48 T 29-03-2018 AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 SMART SM00487 23 223 6.8E-60 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 SUPERFAMILY SSF52540 76 358 1.14E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11510 8558663f9e2beb6bb3074c54d3e213ba 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM460_RS12865 686577aac277f737d875fe198ea6460a 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-95 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM460_RS12865 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.287.680 1 47 4.5E-26 T 29-03-2018 IPR023145 YfbU, helix-hairpin domain AM460_RS12865 686577aac277f737d875fe198ea6460a 164 Pfam PF03887 YfbU domain 1 164 2.9E-69 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM460_RS12865 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.3190.10 54 164 4.6E-45 T 29-03-2018 IPR023146 YfbU, alpha-helical bundle domain AM460_RS12865 686577aac277f737d875fe198ea6460a 164 SUPERFAMILY SSF116960 1 164 1.1E-70 T 29-03-2018 AM460_RS12865 686577aac277f737d875fe198ea6460a 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 40.884 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM460_RS12865 686577aac277f737d875fe198ea6460a 164 PIRSF PIRSF006272 1 164 1.1E-80 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM460_RS06995 b96357127342801205b8711e4116aaec 374 Gene3D G3DSA:1.10.10.10 252 362 1.3E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06995 b96357127342801205b8711e4116aaec 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 283 2.8E-88 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM460_RS06995 b96357127342801205b8711e4116aaec 374 Gene3D G3DSA:3.40.50.450 108 251 1.7E-33 T 29-03-2018 AM460_RS06995 b96357127342801205b8711e4116aaec 374 SUPERFAMILY SSF102405 78 283 3.36E-40 T 29-03-2018 AM460_RS06995 b96357127342801205b8711e4116aaec 374 Pfam PF02481 DNA recombination-mediator protein A 67 274 1.5E-70 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 Pfam PF08497 Radical SAM N-terminal 29 379 8.4E-146 T 29-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AM460_RS08485 6452a5897064f919568815a08aaedb59 739 SUPERFAMILY SSF102114 377 440 1.18E-10 T 29-03-2018 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 SUPERFAMILY SSF102114 470 624 1.18E-10 T 29-03-2018 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 Gene3D G3DSA:3.20.20.70 306 737 1.2E-31 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 29 646 50.962 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 1.6E-266 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 SMART SM00729 376 623 4.5E-5 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 Pfam PF11842 Domain of unknown function (DUF3362) 594 728 6.1E-45 T 29-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AM460_RS08485 6452a5897064f919568815a08aaedb59 739 Pfam PF04055 Radical SAM superfamily 380 585 1.5E-19 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS08485 6452a5897064f919568815a08aaedb59 739 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 1.4E-98 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 2.0E-162 T 29-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 Hamap MF_01294 D-tagatose-1,6-bisphosphate aldolase subunit GatY [gatY]. 1 284 70.431 T 29-03-2018 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY GO:0009025|GO:0019404|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 SUPERFAMILY SSF51569 3 283 2.34E-97 T 29-03-2018 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 PIRSF PIRSF001359 1 284 2.4E-114 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 Gene3D G3DSA:3.20.20.70 1 284 1.4E-104 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 4.8E-111 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS13910 2e963d5109584735651cff0e0da2dec5 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 7.8E-233 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 SUPERFAMILY SSF50677 191 365 5.23E-57 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 SUPERFAMILY SSF47323 642 899 1.87E-70 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 4.4E-42 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 SUPERFAMILY SSF46589 884 947 6.8E-16 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 Gene3D G3DSA:1.10.287.380 877 946 2.9E-23 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 Gene3D G3DSA:1.10.730.10 631 816 1.3E-55 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.7E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.7E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.7E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.7E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.7E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 SUPERFAMILY SSF52374 364 571 4.38E-137 T 29-03-2018 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 SUPERFAMILY SSF52374 1 192 4.38E-137 T 29-03-2018 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 SUPERFAMILY SSF52374 609 641 4.38E-137 T 29-03-2018 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 Gene3D G3DSA:3.40.50.620 2 630 4.7E-135 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 5.0E-16 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.2 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM460_RS01410 cccf53b06d86467b3450058308f2eb58 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS01280 498721daf0d230f26a705c7057ff8745 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.2E-36 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS19165 498721daf0d230f26a705c7057ff8745 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.2E-36 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS09105 498721daf0d230f26a705c7057ff8745 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.2E-36 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS15000 498721daf0d230f26a705c7057ff8745 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.2E-36 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS27965 498721daf0d230f26a705c7057ff8745 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.2E-36 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS09250 498721daf0d230f26a705c7057ff8745 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.2E-36 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 Gene3D G3DSA:3.40.50.1370 164 334 5.9E-51 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.459 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.3E-48 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.0E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.0E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.0E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.0E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 1.1E-140 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 Gene3D G3DSA:3.40.50.1370 5 163 9.2E-57 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 1.2E-54 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 SUPERFAMILY SSF53671 2 333 6.29E-99 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS01430 b676690fa8adb0774762bf9776f5c346 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 Gene3D G3DSA:2.40.30.20 94 192 2.3E-27 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 PIRSF PIRSF000498 1 212 1.9E-77 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 SUPERFAMILY SSF63380 94 201 3.66E-32 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 6.6E-92 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 Pfam PF00677 Lumazine binding domain 100 185 1.5E-22 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 Pfam PF00677 Lumazine binding domain 3 87 1.1E-22 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 Gene3D G3DSA:2.40.30.20 1 93 1.6E-28 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS16740 ba36ec06b78cd67ac2924910795c560c 213 SUPERFAMILY SSF63380 1 93 6.04E-28 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Gene3D G3DSA:3.30.450.40 500 653 4.3E-6 T 29-03-2018 IPR029016 GAF domain-like AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Pfam PF13492 GAF domain 529 644 5.1E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 SUPERFAMILY SSF55874 719 885 1.09E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 730 1.5E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 810 824 1.6E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 880 1.6E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 861 1.6E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 838 1.6E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 1.5E-97 T 29-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 1.6E-28 T 29-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 SUPERFAMILY SSF52402 253 353 1.42E-5 T 29-03-2018 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Gene3D G3DSA:1.20.120.620 401 499 2.5E-26 T 29-03-2018 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 SMART SM00388 663 730 1.4E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 SUPERFAMILY SSF47384 653 731 3.92E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Gene3D G3DSA:3.30.565.10 725 883 1.7E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Gene3D G3DSA:3.40.50.300 21 147 1.1E-21 T 29-03-2018 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Gene3D G3DSA:3.40.50.620 227 376 2.4E-9 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 882 1.1E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 Gene3D G3DSA:1.10.287.130 654 724 5.1E-11 T 29-03-2018 AM460_RS22875 dfee6cfbe91c6505d0c89a7d0130ba00 894 SMART SM00387 773 883 5.8E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS10495 7ab5de33a2e6b4f7494ab08f32db8348 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.592 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM460_RS10495 7ab5de33a2e6b4f7494ab08f32db8348 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.3E-66 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM460_RS10495 7ab5de33a2e6b4f7494ab08f32db8348 302 SUPERFAMILY SSF52402 6 209 1.85E-75 T 29-03-2018 AM460_RS10495 7ab5de33a2e6b4f7494ab08f32db8348 302 Gene3D G3DSA:3.40.50.620 2 300 7.5E-43 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS10495 7ab5de33a2e6b4f7494ab08f32db8348 302 PIRSF PIRSF002936 1 302 7.6E-156 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM460_RS10495 7ab5de33a2e6b4f7494ab08f32db8348 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.0E-169 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 Gene3D G3DSA:3.50.50.60 12 378 1.8E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 7.9E-37 T 29-03-2018 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 7.9E-37 T 29-03-2018 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 7.9E-37 T 29-03-2018 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 338 7.9E-37 T 29-03-2018 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 354 7.9E-37 T 29-03-2018 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 17 39 7.9E-37 T 29-03-2018 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 Pfam PF01494 FAD binding domain 16 352 3.0E-83 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 Hamap MF_01652 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase [mhpA]. 7 554 69.008 T 29-03-2018 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase GO:0008688|GO:0019622|GO:0055114 KEGG: 00360+1.14.13.127|KEGG: 00362+1.14.13.12|KEGG: 00627+1.14.13.12|MetaCyc: PWY-6690 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 SUPERFAMILY SSF51905 274 388 2.31E-68 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS24600 731f418c107162caf4429003e5eebc89 554 SUPERFAMILY SSF51905 16 187 2.31E-68 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 141 402 3.0E-18 T 29-03-2018 AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 21 44 - T 29-03-2018 IPR013087 Zinc finger C2H2-type GO:0003676 AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 Gene3D G3DSA:3.20.20.70 7 348 3.4E-31 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 SUPERFAMILY SSF102114 20 352 2.49E-39 T 29-03-2018 AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 Pfam PF04055 Radical SAM superfamily 20 169 1.2E-11 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 Pfam PF13186 Iron-sulfur cluster-binding domain 283 343 2.2E-9 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 282 371 9.6E-19 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AM460_RS04190 e94fefb69789444d6d19f43af93ebbbc 411 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 11 390 1.4E-154 T 29-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AM460_RS22560 10679d785f4069b3947b3d4f3e1e8ac9 350 Gene3D G3DSA:3.20.20.70 8 350 4.4E-136 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS22560 10679d785f4069b3947b3d4f3e1e8ac9 350 PIRSF PIRSF001361 1 350 1.5E-167 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM460_RS22560 10679d785f4069b3947b3d4f3e1e8ac9 350 Pfam PF00793 DAHP synthetase I family 38 338 1.3E-112 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS22560 10679d785f4069b3947b3d4f3e1e8ac9 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.7E-183 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM460_RS22560 10679d785f4069b3947b3d4f3e1e8ac9 350 SUPERFAMILY SSF51569 7 348 6.07E-141 T 29-03-2018 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 403 2.0E-82 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 Pfam PF00364 Biotin-requiring enzyme 5 76 8.4E-17 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 405 8.3E-196 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 Gene3D G3DSA:3.30.559.10 159 403 4.3E-92 T 29-03-2018 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 Pfam PF02817 e3 binding domain 114 147 2.5E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 SUPERFAMILY SSF47005 106 151 1.83E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 SUPERFAMILY SSF52777 175 404 3.78E-90 T 29-03-2018 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 Gene3D G3DSA:3.90.1170.30 47 117 1.9E-4 T 29-03-2018 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 Gene3D G3DSA:3.90.1170.30 1 46 5.9E-13 T 29-03-2018 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 Gene3D G3DSA:4.10.320.10 118 158 5.5E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM460_RS22715 90ddb1b265c85c156d3cde4a4ecf3afd 405 SUPERFAMILY SSF51230 2 95 3.53E-24 T 29-03-2018 IPR011053 Single hybrid motif AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 Gene3D G3DSA:3.40.50.300 290 551 2.0E-56 T 29-03-2018 AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 Pfam PF00005 ABC transporter 22 191 1.3E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 Pfam PF00005 ABC transporter 340 473 3.1E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 Pfam PF12848 ABC transporter 230 306 2.2E-11 T 29-03-2018 IPR032781 ABC-transporter extension domain AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 SUPERFAMILY SSF52540 11 243 2.27E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 Gene3D G3DSA:3.40.50.300 12 289 3.0E-57 T 29-03-2018 AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 SUPERFAMILY SSF52540 302 526 3.89E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 SMART SM00382 348 522 9.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 SMART SM00382 31 236 3.5E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00165 21ec651a6e478a7b5315f56f5fb4fe21 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 5.6E-295 T 29-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD AM460_RS18415 6866f183b93cfa6b3309ba82c4169c3d 60 Gene3D G3DSA:3.40.50.1390 1 60 9.5E-15 T 29-03-2018 AM460_RS18415 6866f183b93cfa6b3309ba82c4169c3d 60 Pfam PF00239 Resolvase, N terminal domain 3 60 1.8E-14 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS18415 6866f183b93cfa6b3309ba82c4169c3d 60 SUPERFAMILY SSF53041 2 60 1.57E-17 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM460_RS18415 6866f183b93cfa6b3309ba82c4169c3d 60 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF04542 Sigma-70 region 2 25 91 4.3E-18 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88946 2 105 5.34E-32 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.10.10 116 187 2.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 6.8E-32 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF08281 Sigma-70, region 4 129 180 4.5E-19 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.1740.10 1 115 1.5E-31 T 29-03-2018 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 3.2E-99 T 29-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS11525 cbc71f42bfa9d5ba628fd0f044c0b4df 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 SUPERFAMILY SSF46689 213 258 1.97E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 SUPERFAMILY SSF51182 23 182 4.3E-13 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 Gene3D G3DSA:1.10.10.60 166 213 2.9E-7 T 29-03-2018 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 SMART SM00342 173 256 4.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 Gene3D G3DSA:1.10.10.60 214 261 3.4E-6 T 29-03-2018 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 Pfam PF12833 Helix-turn-helix domain 180 256 2.1E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 Pfam PF02311 AraC-like ligand binding domain 22 96 8.8E-5 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS16045 cd34b09c2c490123754e9788f0ada3f3 273 Gene3D G3DSA:2.60.120.10 3 165 1.0E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 SMART SM00831 44 117 1.4E-7 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 SUPERFAMILY SSF81660 340 543 2.07E-41 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 SUPERFAMILY SSF56784 532 683 5.76E-38 T 29-03-2018 IPR023214 HAD-like domain AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 SUPERFAMILY SSF81653 168 270 2.88E-29 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 367 653 1.5E-19 T 29-03-2018 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 SUPERFAMILY SSF81665 272 365 3.66E-105 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 SUPERFAMILY SSF81665 46 155 3.66E-105 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 SUPERFAMILY SSF81665 688 896 3.66E-105 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 Pfam PF00690 Cation transporter/ATPase, N-terminus 48 112 6.5E-16 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 373 379 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 34 898 0.0 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 Gene3D G3DSA:2.70.150.10 54 272 1.7E-46 T 29-03-2018 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 Pfam PF00689 Cation transporting ATPase, C-terminus 722 888 3.7E-14 T 29-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 Gene3D G3DSA:1.20.1110.10 560 893 1.0E-56 T 29-03-2018 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 301 320 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 284 300 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 405 418 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 2.4E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 Gene3D G3DSA:3.40.1110.10 333 546 2.9E-40 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 123 407 1.9E-38 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 606 728 5.1E-31 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS01485 059a5302ebabe7d37217b94b53229d6e 898 Pfam PF00122 E1-E2 ATPase 158 351 2.9E-46 T 29-03-2018 AM460_RS26080 17fd52f479c8d507828a53c262d00045 307 SUPERFAMILY SSF51569 4 275 2.09E-42 T 29-03-2018 AM460_RS26080 17fd52f479c8d507828a53c262d00045 307 Pfam PF00701 Dihydrodipicolinate synthetase family 5 232 3.0E-20 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS26080 17fd52f479c8d507828a53c262d00045 307 SMART SM01130 3 295 1.5E-22 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS26080 17fd52f479c8d507828a53c262d00045 307 PIRSF PIRSF001365 1 301 5.1E-43 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS26080 17fd52f479c8d507828a53c262d00045 307 Gene3D G3DSA:3.20.20.70 1 281 1.2E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 SMART SM00421 139 196 5.8E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 SUPERFAMILY SSF46894 134 196 6.12E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 Gene3D G3DSA:3.40.50.2300 1 122 0.0013 T 29-03-2018 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 196 1.5E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS05720 1e869f19a3ff753f8360c30f0be53147 200 Gene3D G3DSA:1.10.10.10 127 198 8.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 SUPERFAMILY SSF46785 28 99 3.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 SUPERFAMILY SSF48008 120 252 2.33E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 4 257 66.692 T 29-03-2018 IPR023730 HTH-type transcriptional repressor NanR AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 Pfam PF07729 FCD domain 125 246 2.2E-20 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 Gene3D G3DSA:1.20.120.530 116 263 6.6E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 95 9.8E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 Gene3D G3DSA:1.10.10.10 26 103 4.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 SMART SM00345 36 95 2.3E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 SMART SM00895 123 247 4.9E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 5.6E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS07345 5a776f3a334e1799df00b76c5d435990 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 5.6E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS14570 1543dff37ac305ff941c61885a57aa29 715 SUPERFAMILY SSF56935 39 715 4.88E-94 T 29-03-2018 AM460_RS14570 1543dff37ac305ff941c61885a57aa29 715 Gene3D G3DSA:2.170.130.10 49 170 3.8E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS14570 1543dff37ac305ff941c61885a57aa29 715 Pfam PF00593 TonB dependent receptor 212 711 1.9E-40 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS14570 1543dff37ac305ff941c61885a57aa29 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 159 2.0E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS14570 1543dff37ac305ff941c61885a57aa29 715 Gene3D G3DSA:2.40.170.20 171 715 2.8E-53 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS21665 473bb4be30eb0ef54f6410f75739ff4c 583 Gene3D G3DSA:1.10.10.60 5 128 6.4E-9 T 29-03-2018 AM460_RS21665 473bb4be30eb0ef54f6410f75739ff4c 583 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 7 63 3.3E-26 T 29-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AM460_RS21665 473bb4be30eb0ef54f6410f75739ff4c 583 SUPERFAMILY SSF46689 6 68 6.45E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS21665 473bb4be30eb0ef54f6410f75739ff4c 583 Pfam PF03237 Terminase-like family 150 374 4.0E-47 T 29-03-2018 AM460_RS21665 473bb4be30eb0ef54f6410f75739ff4c 583 Pfam PF17289 Terminase RNaseH-like domain 405 566 2.3E-26 T 29-03-2018 IPR035421 Terminase, large subunit gp17-like AM460_RS22820 97a3cff58139271b54433381d5903371 310 SUPERFAMILY SSF50891 173 288 8.34E-12 T 29-03-2018 IPR029000 Cyclophilin-like domain AM460_RS22820 97a3cff58139271b54433381d5903371 310 SMART SM00797 23 298 7.8E-149 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM460_RS22820 97a3cff58139271b54433381d5903371 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 310 1.2E-144 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM460_RS22820 97a3cff58139271b54433381d5903371 310 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 281 2.3E-92 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 PIRSF PIRSF001491 1 407 1.8E-165 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.063 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.40.720.10 1 128 2.3E-21 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF143856 117 235 2.62E-50 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.40.720.10 272 406 3.3E-11 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF53649 1 114 1.83E-69 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF53649 236 406 1.83E-69 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 Pfam PF01676 Metalloenzyme superfamily 2 398 6.8E-47 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 1.5E-210 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM460_RS00205 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.30.70.1250 129 235 1.8E-51 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM460_RS02700 8f502ab42f216744588a4dc05208d1ba 185 Pfam PF04973 Nicotinamide mononucleotide transporter 3 180 4.7E-47 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM460_RS02700 8f502ab42f216744588a4dc05208d1ba 185 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 181 5.9E-22 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 PIRSF PIRSF006621 1 321 2.0E-99 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:3.20.20.70 6 246 1.3E-55 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:1.10.1200.80 252 321 2.2E-21 T 29-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 SUPERFAMILY SSF51395 10 319 1.83E-87 T 29-03-2018 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 6.6E-117 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 5.2E-143 T 29-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AM460_RS07130 b4444db13d93a430c75b1f22d9459e45 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.407 T 29-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AM460_RS07480 8f27ec0d780bfc7bb9f01b24673b9a1a 260 Pfam PF02405 Permease MlaE 44 256 6.2E-73 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AM460_RS07480 8f27ec0d780bfc7bb9f01b24673b9a1a 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 5.4E-107 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 SUPERFAMILY SSF52374 3 156 1.88E-47 T 29-03-2018 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 Pfam PF01467 Cytidylyltransferase-like 6 134 1.1E-23 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 8.2E-63 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.0E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.0E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.0E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.0E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.0E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 Gene3D G3DSA:3.40.50.620 1 159 1.3E-36 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 8.2E-20 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 37.373 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM460_RS05080 4b95aaf2381b31bd2c9b555e36181f60 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.001 T 29-03-2018 AM460_RS23865 057c039d5e1ce6bca6144cf710d89113 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 1.6E-115 T 29-03-2018 IPR005226 UPF0014 family AM460_RS23865 057c039d5e1ce6bca6144cf710d89113 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 1.3E-81 T 29-03-2018 IPR005226 UPF0014 family AM460_RS06880 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00281 Ribosomal protein L5 24 80 9.9E-29 T 29-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06880 1a6377b3ef5b5fc6796affa39279224a 179 SUPERFAMILY SSF55282 4 179 2.35E-79 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06880 1a6377b3ef5b5fc6796affa39279224a 179 Gene3D G3DSA:3.30.1440.10 1 179 3.9E-81 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06880 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.4E-41 T 29-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06880 1a6377b3ef5b5fc6796affa39279224a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 29-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06880 1a6377b3ef5b5fc6796affa39279224a 179 PIRSF PIRSF002161 1 179 1.8E-66 T 29-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06880 1a6377b3ef5b5fc6796affa39279224a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.826 T 29-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06355 55e04218deeb96388e3cf68e1b1cdd35 773 Pfam PF07670 Nucleoside recognition 512 689 9.0E-37 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM460_RS06355 55e04218deeb96388e3cf68e1b1cdd35 773 Pfam PF07670 Nucleoside recognition 353 443 6.2E-13 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM460_RS06355 55e04218deeb96388e3cf68e1b1cdd35 773 Gene3D G3DSA:3.40.50.300 2 283 1.4E-35 T 29-03-2018 AM460_RS06355 55e04218deeb96388e3cf68e1b1cdd35 773 Pfam PF02421 Ferrous iron transport protein B 5 162 3.7E-64 T 29-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AM460_RS06355 55e04218deeb96388e3cf68e1b1cdd35 773 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 4.4E-255 T 29-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AM460_RS06355 55e04218deeb96388e3cf68e1b1cdd35 773 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 1.9E-20 T 29-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AM460_RS06355 55e04218deeb96388e3cf68e1b1cdd35 773 SUPERFAMILY SSF52540 4 170 2.33E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS17630 673d5929fb0bc0b8f918ae2b8d7718e2 172 Pfam PF00583 Acetyltransferase (GNAT) family 16 136 1.7E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS17630 673d5929fb0bc0b8f918ae2b8d7718e2 172 Gene3D G3DSA:3.40.630.30 1 169 3.0E-36 T 29-03-2018 AM460_RS17630 673d5929fb0bc0b8f918ae2b8d7718e2 172 SUPERFAMILY SSF55729 3 165 2.4E-35 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Pfam PF13174 Tetratricopeptide repeat 218 250 5.7E-7 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 3.7E-40 T 29-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Gene3D G3DSA:1.25.40.10 138 190 0.091 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Gene3D G3DSA:1.25.40.10 191 225 1.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Gene3D G3DSA:1.20.5.50 35 81 5.1E-5 T 29-03-2018 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 263 19.837 T 29-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Gene3D G3DSA:1.25.40.10 226 263 2.5E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Pfam PF13432 Tetratricopeptide repeat 159 214 5.8E-6 T 29-03-2018 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 SUPERFAMILY SSF48452 140 254 1.28E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS22625 a8ce25027b71215fbbfbda7b76203924 263 Pfam PF16331 TolA binding protein trimerisation 37 110 2.3E-24 T 29-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AM460_RS16490 0578bb92633224eceedd770a2bb59f86 237 Gene3D G3DSA:3.20.20.450 8 237 6.4E-14 T 29-03-2018 IPR001633 EAL domain AM460_RS16490 0578bb92633224eceedd770a2bb59f86 237 SUPERFAMILY SSF141868 13 230 6.28E-12 T 29-03-2018 IPR001633 EAL domain AM460_RS16490 0578bb92633224eceedd770a2bb59f86 237 Pfam PF00563 EAL domain 13 222 8.3E-11 T 29-03-2018 IPR001633 EAL domain AM460_RS13405 9616167ae8a8e93514c6041c1f1cdc4e 94 Pfam PF01386 Ribosomal L25p family 4 91 2.6E-25 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM460_RS13405 9616167ae8a8e93514c6041c1f1cdc4e 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 1.0E-45 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM460_RS13405 9616167ae8a8e93514c6041c1f1cdc4e 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.53 T 29-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM460_RS13405 9616167ae8a8e93514c6041c1f1cdc4e 94 SUPERFAMILY SSF50715 1 93 1.13E-31 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS13405 9616167ae8a8e93514c6041c1f1cdc4e 94 Gene3D G3DSA:2.40.240.10 1 94 1.3E-31 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 510 0.0 T 29-03-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 4.3E-52 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 Gene3D G3DSA:3.40.50.970 374 527 1.5E-27 T 29-03-2018 AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 Gene3D G3DSA:3.40.50.1220 194 373 1.9E-43 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 SUPERFAMILY SSF52518 3 186 1.4E-49 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 4.4E-36 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 494 4.3E-25 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 Gene3D G3DSA:3.40.50.970 1 193 5.5E-50 T 29-03-2018 AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 SUPERFAMILY SSF52518 369 498 3.69E-36 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS23795 79c6d28c8220b773847bc47ada960cbe 535 SUPERFAMILY SSF52467 186 376 5.78E-47 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 PIRSF PIRSF002808 5 452 2.7E-178 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 2.8E-170 T 29-03-2018 AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 Gene3D G3DSA:1.20.1250.20 18 224 3.8E-35 T 29-03-2018 AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 Gene3D G3DSA:1.20.1250.20 240 450 5.6E-31 T 29-03-2018 AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 SUPERFAMILY SSF103473 12 442 5.1E-85 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 8.6E-272 T 29-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AM460_RS13130 0062f5d6b62aa6f6e3fc74bb26912446 452 Pfam PF07690 Major Facilitator Superfamily 34 400 9.8E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS16915 81d89c8e6abc477080f452f53b49a4b5 206 SMART SM00900 99 191 5.7E-37 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM460_RS16915 81d89c8e6abc477080f452f53b49a4b5 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 1.6E-69 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM460_RS16915 81d89c8e6abc477080f452f53b49a4b5 206 Pfam PF04205 FMN-binding domain 99 187 3.1E-19 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM460_RS16915 81d89c8e6abc477080f452f53b49a4b5 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 26.887 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM460_RS16915 81d89c8e6abc477080f452f53b49a4b5 206 PIRSF PIRSF006091 1 203 2.9E-71 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM460_RS24095 f4608f956e000a4c853af4ec2876fca6 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 112 4.1E-26 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS24095 f4608f956e000a4c853af4ec2876fca6 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 32 102 7.1E-15 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS24095 f4608f956e000a4c853af4ec2876fca6 129 SUPERFAMILY SSF46767 31 113 2.62E-26 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM460_RS24095 f4608f956e000a4c853af4ec2876fca6 129 Gene3D G3DSA:1.10.10.10 28 129 5.8E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09950 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS09950 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS09950 453121ae4e1098a84bfe62fd567d28b8 176 Pfam PF00293 NUDIX domain 7 146 5.2E-27 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS09950 453121ae4e1098a84bfe62fd567d28b8 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.961 T 29-03-2018 IPR022927 RNA pyrophosphohydrolase RppH AM460_RS09950 453121ae4e1098a84bfe62fd567d28b8 176 Gene3D G3DSA:3.90.79.10 1 164 4.6E-36 T 29-03-2018 AM460_RS09950 453121ae4e1098a84bfe62fd567d28b8 176 SUPERFAMILY SSF55811 5 159 6.77E-33 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS09950 453121ae4e1098a84bfe62fd567d28b8 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS02790 b7e8aa06376d2fc8647a9229efe067f8 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 25.759 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AM460_RS02790 b7e8aa06376d2fc8647a9229efe067f8 165 Pfam PF04345 Chorismate lyase 16 165 5.8E-31 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AM460_RS02790 b7e8aa06376d2fc8647a9229efe067f8 165 Gene3D G3DSA:3.40.1410.10 2 165 1.1E-44 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS02790 b7e8aa06376d2fc8647a9229efe067f8 165 SUPERFAMILY SSF64288 6 165 1.27E-46 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 SUPERFAMILY SSF56176 437 521 1.58E-21 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 Gene3D G3DSA:3.10.580.10 283 434 7.1E-29 T 29-03-2018 AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 Pfam PF03741 Integral membrane protein TerC family 14 203 2.2E-50 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 Gene3D G3DSA:3.30.465.10 435 518 1.4E-22 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 Pfam PF00571 CBS domain 302 358 2.8E-4 T 29-03-2018 IPR000644 CBS domain AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 Pfam PF00571 CBS domain 372 422 1.0E-6 T 29-03-2018 IPR000644 CBS domain AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 SUPERFAMILY SSF54631 290 424 1.3E-26 T 29-03-2018 AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 SMART SM01091 439 518 3.0E-25 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS14050 489522a7256d2bc0f499837531aec43d 527 Pfam PF03471 Transporter associated domain 440 516 2.0E-19 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS16335 a0de2a6a74b4128dddc5bc89c77b6413 116 PIRSF PIRSF000699 10 116 7.7E-41 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM460_RS16335 a0de2a6a74b4128dddc5bc89c77b6413 116 Gene3D G3DSA:1.20.58.80 15 113 7.4E-35 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM460_RS16335 a0de2a6a74b4128dddc5bc89c77b6413 116 SUPERFAMILY SSF46973 14 113 5.36E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM460_RS16335 a0de2a6a74b4128dddc5bc89c77b6413 116 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 2.9E-32 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM460_RS16335 a0de2a6a74b4128dddc5bc89c77b6413 116 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 15 113 1.6E-41 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM460_RS06675 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Pfam PF04102 SlyX 6 72 4.6E-24 T 29-03-2018 IPR007236 SlyX AM460_RS06675 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Gene3D G3DSA:1.20.5.300 5 50 6.7E-17 T 29-03-2018 AM460_RS06675 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 17.586 T 29-03-2018 IPR007236 SlyX AM460_RS22305 71a004242fcd228f7df5e22728baad96 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 67 1.7E-12 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM460_RS22305 71a004242fcd228f7df5e22728baad96 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM460_RS22305 71a004242fcd228f7df5e22728baad96 88 SUPERFAMILY SSF57716 39 72 2.71E-8 T 29-03-2018 AM460_RS22305 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 1.5E-6 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS22305 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 1.5E-6 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS22305 71a004242fcd228f7df5e22728baad96 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 9 67 9.4E-18 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 286 3.8E-86 T 29-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 SUPERFAMILY SSF53927 1 148 6.52E-41 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 1.1E-44 T 29-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 PIRSF PIRSF006334 14 293 4.2E-107 T 29-03-2018 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 SUPERFAMILY SSF53927 152 293 4.02E-45 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 139 2.0E-11 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 Gene3D G3DSA:3.40.140.10 180 294 5.7E-17 T 29-03-2018 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 49.766 T 29-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM460_RS13650 d323ea80c071d35d195ec7b013d7badc 294 Gene3D G3DSA:3.40.140.10 38 173 3.6E-27 T 29-03-2018 AM460_RS25630 b7b96a9186862f8ec5f8b8aa72662fbf 866 Pfam PF00577 Outer membrane usher protein 200 772 6.4E-157 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS25630 b7b96a9186862f8ec5f8b8aa72662fbf 866 Pfam PF13953 PapC C-terminal domain 781 844 5.4E-18 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS25630 b7b96a9186862f8ec5f8b8aa72662fbf 866 SUPERFAMILY SSF141729 34 160 3.4E-32 T 29-03-2018 AM460_RS25630 b7b96a9186862f8ec5f8b8aa72662fbf 866 Pfam PF13954 PapC N-terminal domain 35 186 1.2E-43 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS25630 b7b96a9186862f8ec5f8b8aa72662fbf 866 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM460_RS14150 5efa2c074e05b0c70cfb1f83c789005a 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.3E-118 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM460_RS14150 5efa2c074e05b0c70cfb1f83c789005a 258 SUPERFAMILY SSF51366 1 257 1.33E-73 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS14150 5efa2c074e05b0c70cfb1f83c789005a 258 Gene3D G3DSA:3.20.20.70 4 252 6.9E-59 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS14150 5efa2c074e05b0c70cfb1f83c789005a 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 45.081 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM460_RS14150 5efa2c074e05b0c70cfb1f83c789005a 258 Pfam PF00977 Histidine biosynthesis protein 5 239 4.5E-79 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 30.039 T 29-03-2018 IPR026593 Protein translocase subunit SecY AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PIRSF PIRSF004557 11 441 5.1E-124 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.3E-141 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Pfam PF00344 SecY translocase 76 417 7.1E-120 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 7.7E-99 T 29-03-2018 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 SUPERFAMILY SSF103491 16 424 4.18E-134 T 29-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS06920 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Gene3D G3DSA:1.10.3370.10 12 439 2.0E-160 T 29-03-2018 AM460_RS07825 7fc82bb2a87af639adc6313eb10fa614 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 3.8E-63 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM460_RS07825 7fc82bb2a87af639adc6313eb10fa614 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 69.085 T 29-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 AM460_RS07825 7fc82bb2a87af639adc6313eb10fa614 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 5.9E-149 T 29-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 AM460_RS07825 7fc82bb2a87af639adc6313eb10fa614 256 SUPERFAMILY SSF51621 4 255 1.6E-82 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS07825 7fc82bb2a87af639adc6313eb10fa614 256 Gene3D G3DSA:3.20.20.60 3 255 2.1E-44 T 29-03-2018 AM460_RS11270 53b8333890e494f2d7a5dd2862ff9e2b 402 Gene3D G3DSA:2.40.330.10 1 175 1.4E-37 T 29-03-2018 IPR015300 DNA-binding pseudobarrel domain AM460_RS11270 53b8333890e494f2d7a5dd2862ff9e2b 402 Pfam PF09217 Restriction endonuclease EcoRII, N-terminal 15 163 3.0E-66 T 29-03-2018 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal AM460_RS11270 53b8333890e494f2d7a5dd2862ff9e2b 402 SUPERFAMILY SSF101936 3 173 2.12E-61 T 29-03-2018 IPR015300 DNA-binding pseudobarrel domain AM460_RS11270 53b8333890e494f2d7a5dd2862ff9e2b 402 SUPERFAMILY SSF52980 178 394 2.04E-80 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS11270 53b8333890e494f2d7a5dd2862ff9e2b 402 Pfam PF09019 EcoRII C terminal 227 391 2.3E-73 T 29-03-2018 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal GO:0003677|GO:0009036|GO:0009307 AM460_RS07435 261ff6da90a7a3f692be0c00dde3dae7 95 SUPERFAMILY SSF69754 1 95 8.11E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS07435 261ff6da90a7a3f692be0c00dde3dae7 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.9E-37 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS07435 261ff6da90a7a3f692be0c00dde3dae7 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 4.1E-27 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS07435 261ff6da90a7a3f692be0c00dde3dae7 95 Gene3D G3DSA:3.30.160.100 1 95 3.0E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS00785 3a48dcd9e8cbdfdf450d5ea03d34955b 130 Pfam PF04965 Gene 25-like lysozyme 21 106 5.7E-11 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM460_RS00785 3a48dcd9e8cbdfdf450d5ea03d34955b 130 Hamap MF_02010 Anti-adapter protein IraD [iraD]. 1 122 37.519 T 29-03-2018 IPR023776 Anti-adapter protein, IraD GO:0006974|GO:0043856 AM460_RS00785 3a48dcd9e8cbdfdf450d5ea03d34955b 130 Gene3D G3DSA:3.10.450.40 12 120 4.5E-8 T 29-03-2018 AM460_RS00785 3a48dcd9e8cbdfdf450d5ea03d34955b 130 SUPERFAMILY SSF160719 19 115 4.71E-6 T 29-03-2018 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Gene3D G3DSA:3.40.50.300 552 765 1.1E-54 T 29-03-2018 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 29-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 SUPERFAMILY SSF81923 4 156 1.29E-42 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.4E-55 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Gene3D G3DSA:3.40.50.300 157 342 2.2E-25 T 29-03-2018 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Gene3D G3DSA:1.10.1780.10 1 151 1.2E-33 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.3E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Gene3D G3DSA:1.10.8.60 766 856 7.9E-25 T 29-03-2018 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 SMART SM01086 766 855 1.2E-37 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 SUPERFAMILY SSF52540 546 853 7.34E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 8.8E-13 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 8.9E-13 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 SUPERFAMILY SSF52540 159 545 2.59E-99 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 SMART SM00382 597 752 2.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 SMART SM00382 198 343 5.7E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Gene3D G3DSA:1.10.8.60 343 547 1.6E-44 T 29-03-2018 AM460_RS11420 d6ef643f0804ab84ab4a77a7091bab22 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.0E-28 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS28085 8bb51fa532865d810d0a08ad576d314c 616 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 5 607 3.0E-187 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM460_RS28085 8bb51fa532865d810d0a08ad576d314c 616 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 322 566 4.8E-82 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM460_RS12510 7fa9c590602242bfa753d6922a56337e 445 Pfam PF02447 GntP family permease 7 444 1.6E-165 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS12510 7fa9c590602242bfa753d6922a56337e 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 445 1.4E-175 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS12510 7fa9c590602242bfa753d6922a56337e 445 PIRSF PIRSF002746 2 445 1.4E-147 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS04630 2eae0f3ac2fab7069bacd829c31a55d7 188 Gene3D G3DSA:3.40.50.360 1 188 2.3E-35 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS04630 2eae0f3ac2fab7069bacd829c31a55d7 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 2.0E-38 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM460_RS04630 2eae0f3ac2fab7069bacd829c31a55d7 188 SUPERFAMILY SSF52218 7 178 1.47E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS02855 f67f7872dd8f13c756d3b8f428c75f5e 212 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 206 9.4E-62 T 29-03-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AM460_RS02855 f67f7872dd8f13c756d3b8f428c75f5e 212 SUPERFAMILY SSF159270 20 208 1.03E-56 T 29-03-2018 IPR023373 YmcC-like domain AM460_RS02855 f67f7872dd8f13c756d3b8f428c75f5e 212 Gene3D G3DSA:2.40.360.10 17 212 1.6E-59 T 29-03-2018 IPR023373 YmcC-like domain AM460_RS09830 40070c981f855838d057bf935f9f09e9 398 Gene3D G3DSA:3.40.50.1100 184 396 2.0E-26 T 29-03-2018 AM460_RS09830 40070c981f855838d057bf935f9f09e9 398 SUPERFAMILY SSF53686 36 354 1.96E-61 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS09830 40070c981f855838d057bf935f9f09e9 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 375 1.2E-49 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS09830 40070c981f855838d057bf935f9f09e9 398 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 391 4.3E-210 T 29-03-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 AM460_RS09830 40070c981f855838d057bf935f9f09e9 398 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 392 7.9E-196 T 29-03-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 AM460_RS09830 40070c981f855838d057bf935f9f09e9 398 Gene3D G3DSA:3.40.50.1100 76 183 6.9E-31 T 29-03-2018 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 PIRSF PIRSF001365 1 297 6.5E-85 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 Gene3D G3DSA:3.20.20.70 3 297 3.1E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.4E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.4E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.4E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.4E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 52.009 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 SUPERFAMILY SSF51569 5 291 6.7E-82 T 29-03-2018 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 297 8.6E-173 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.7E-113 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS07350 8c6264609850a1927d3dae67989bc9cb 297 SMART SM01130 4 293 7.5E-88 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS11975 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 6 88 9.99E-17 T 29-03-2018 AM460_RS11975 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF13740 ACT domain 7 82 2.4E-25 T 29-03-2018 AM460_RS11975 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 7 89 3.9E-11 T 29-03-2018 AM460_RS11975 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 93 180 9.6E-14 T 29-03-2018 AM460_RS11975 c431ab61e0ddc8579810ce6d355caa2d 190 PIRSF PIRSF028103 5 180 1.4E-72 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AM460_RS11975 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 91 179 1.53E-17 T 29-03-2018 AM460_RS11975 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF01842 ACT domain 97 166 4.0E-7 T 29-03-2018 IPR002912 ACT domain AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 Gene3D G3DSA:3.90.1150.10 306 425 7.6E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 SUPERFAMILY SSF53383 20 423 2.29E-135 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 PIRSF PIRSF000521 123 424 5.1E-45 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 PIRSF PIRSF000521 23 131 6.2E-4 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 Pfam PF00202 Aminotransferase class-III 17 420 3.8E-146 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 Gene3D G3DSA:3.90.1150.10 2 156 5.2E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 421 3.0E-162 T 29-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS10975 6818aa07c1e5c5e82b1eed01a4e60953 426 Gene3D G3DSA:3.40.640.10 180 305 5.4E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 SUPERFAMILY SSF55124 13 142 1.21E-25 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 Gene3D G3DSA:3.30.413.10 141 345 5.4E-46 T 29-03-2018 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 Gene3D G3DSA:3.30.413.10 425 560 1.5E-24 T 29-03-2018 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 SUPERFAMILY SSF56014 428 559 2.49E-34 T 29-03-2018 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.756 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 SUPERFAMILY SSF55124 346 422 1.8E-21 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 SUPERFAMILY SSF56014 150 344 1.96E-61 T 29-03-2018 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 417 1.0E-14 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 1.5E-12 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 545 0.38 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 1.1E-47 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10470 3c7968bb4f14105748e53323de9da8a2 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 2.5E-303 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS09715 144367ea07dc08896c67c7eb2d10e016 236 Pfam PF13098 Thioredoxin-like domain 104 226 1.2E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS09715 144367ea07dc08896c67c7eb2d10e016 236 Gene3D G3DSA:3.10.450.70 18 78 2.9E-21 T 29-03-2018 AM460_RS09715 144367ea07dc08896c67c7eb2d10e016 236 SUPERFAMILY SSF52833 85 230 2.09E-44 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS09715 144367ea07dc08896c67c7eb2d10e016 236 SUPERFAMILY SSF54423 22 80 1.44E-18 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM460_RS09715 144367ea07dc08896c67c7eb2d10e016 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 75 6.7E-15 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM460_RS09715 144367ea07dc08896c67c7eb2d10e016 236 ProSitePatterns PS00194 Thioredoxin family active site. 110 128 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM460_RS09715 144367ea07dc08896c67c7eb2d10e016 236 Gene3D G3DSA:3.40.30.10 93 236 1.3E-29 T 29-03-2018 AM460_RS18475 dce45a8da6590a6ef5384fd53b87edb8 247 Pfam PF00877 NlpC/P60 family 111 224 1.4E-13 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM460_RS18475 dce45a8da6590a6ef5384fd53b87edb8 247 SUPERFAMILY SSF102712 6 97 7.19E-16 T 29-03-2018 AM460_RS18475 dce45a8da6590a6ef5384fd53b87edb8 247 Gene3D G3DSA:3.40.140.10 3 108 8.2E-13 T 29-03-2018 AM460_RS18475 dce45a8da6590a6ef5384fd53b87edb8 247 SUPERFAMILY SSF54001 102 229 1.28E-16 T 29-03-2018 AM460_RS18475 dce45a8da6590a6ef5384fd53b87edb8 247 Gene3D G3DSA:3.90.1720.10 109 228 3.8E-18 T 29-03-2018 AM460_RS18475 dce45a8da6590a6ef5384fd53b87edb8 247 SMART SM00232 1 119 0.0091 T 29-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AM460_RS18475 dce45a8da6590a6ef5384fd53b87edb8 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 103 1.1E-14 T 29-03-2018 IPR028090 JAB domain, prokaryotic AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 Gene3D G3DSA:3.40.50.300 240 481 2.1E-43 T 29-03-2018 AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 Pfam PF00005 ABC transporter 23 163 1.2E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 Pfam PF00005 ABC transporter 276 429 5.2E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 Gene3D G3DSA:3.40.50.300 8 237 3.3E-33 T 29-03-2018 AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 SUPERFAMILY SSF52540 10 225 5.0E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 SMART SM00382 285 479 2.6E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 SMART SM00382 28 219 2.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22530 a3e21cd521c856788ec315afdc89c181 490 SUPERFAMILY SSF52540 252 480 1.5E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 7.9E-26 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 Gene3D G3DSA:3.90.1170.30 343 429 4.6E-30 T 29-03-2018 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 Gene3D G3DSA:1.20.970.10 3 67 2.8E-21 T 29-03-2018 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 SMART SM00941 350 424 1.6E-30 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 SUPERFAMILY SSF52418 74 334 9.94E-89 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 3.5E-171 T 29-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 7.1E-238 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 SUPERFAMILY SSF47648 3 70 1.31E-21 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.134 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 PIRSF PIRSF000478 1 439 6.5E-155 T 29-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 1.1E-52 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.2E-19 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 SUPERFAMILY SSF54680 337 438 2.88E-33 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 29-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS00210 8d7d4892f796123da36bef0c4ac2bfa7 440 Gene3D G3DSA:3.40.1030.10 69 342 1.6E-82 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS09630 c676d7a5e37881537273eca495577ba4 109 Pfam PF05164 Cell division protein ZapA 6 90 4.6E-20 T 29-03-2018 IPR007838 Cell division protein ZapA-like AM460_RS09630 c676d7a5e37881537273eca495577ba4 109 Gene3D G3DSA:1.20.120.290 8 54 0.025 T 29-03-2018 AM460_RS09630 c676d7a5e37881537273eca495577ba4 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 36.753 T 29-03-2018 IPR023771 Cell division protein ZapA, eubacteria AM460_RS09630 c676d7a5e37881537273eca495577ba4 109 SUPERFAMILY SSF102829 6 94 1.01E-25 T 29-03-2018 IPR007838 Cell division protein ZapA-like AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 132 774 5.7E-165 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 Gene3D G3DSA:2.40.170.20 257 774 3.2E-81 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 757 774 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 SUPERFAMILY SSF56935 117 774 4.97E-120 T 29-03-2018 AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 63 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 SMART SM00965 56 107 1.6E-14 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 Pfam PF00593 TonB dependent receptor 328 772 2.3E-47 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 244 2.9E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 Pfam PF07660 Secretin and TonB N terminus short domain 57 107 9.3E-10 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM460_RS01155 21f21f5a442dd376593933811a6a243a 774 Gene3D G3DSA:2.170.130.10 127 256 7.7E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS19795 4da47b0fe3707fd09e4159d04c302ef7 179 Gene3D G3DSA:1.10.3600.10 28 135 7.0E-30 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT AM460_RS19795 4da47b0fe3707fd09e4159d04c302ef7 179 Pfam PF06254 Putative bacterial toxin ydaT 67 154 5.5E-37 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT AM460_RS21445 b165a1a1d45b92142611b65b6ff08b5d 590 Pfam PF03237 Terminase-like family 164 386 5.3E-56 T 29-03-2018 AM460_RS21445 b165a1a1d45b92142611b65b6ff08b5d 590 Pfam PF17289 Terminase RNaseH-like domain 413 571 2.2E-42 T 29-03-2018 IPR035421 Terminase, large subunit gp17-like AM460_RS21445 b165a1a1d45b92142611b65b6ff08b5d 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 12 69 3.0E-26 T 29-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AM460_RS21445 b165a1a1d45b92142611b65b6ff08b5d 590 Gene3D G3DSA:1.10.10.60 9 77 1.5E-6 T 29-03-2018 AM460_RS02320 3adedb1b25fd3ecf50774e9b14cca205 259 Gene3D G3DSA:1.10.3720.10 12 259 5.5E-33 T 29-03-2018 AM460_RS02320 3adedb1b25fd3ecf50774e9b14cca205 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 1.4E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02320 3adedb1b25fd3ecf50774e9b14cca205 259 SUPERFAMILY SSF161098 62 253 4.32E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02320 3adedb1b25fd3ecf50774e9b14cca205 259 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 258 1.1E-93 T 29-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM460_RS06805 120b9358ff8ab6b320b5b28e69969bf2 489 Gene3D G3DSA:1.10.101.10 399 468 9.2E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS06805 120b9358ff8ab6b320b5b28e69969bf2 489 SUPERFAMILY SSF47090 400 470 2.83E-11 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS06805 120b9358ff8ab6b320b5b28e69969bf2 489 SUPERFAMILY SSF52540 5 213 5.82E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06805 120b9358ff8ab6b320b5b28e69969bf2 489 Gene3D G3DSA:3.40.50.300 9 188 4.9E-6 T 29-03-2018 AM460_RS06805 120b9358ff8ab6b320b5b28e69969bf2 489 Pfam PF01471 Putative peptidoglycan binding domain 408 461 1.1E-7 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS06805 120b9358ff8ab6b320b5b28e69969bf2 489 Gene3D G3DSA:3.90.70.10 290 398 9.1E-15 T 29-03-2018 AM460_RS06805 120b9358ff8ab6b320b5b28e69969bf2 489 Pfam PF13401 AAA domain 20 137 1.6E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02345 604444bfad66acff3a6b982b23678b62 281 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 8.2E-149 T 29-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS02345 604444bfad66acff3a6b982b23678b62 281 PIRSF PIRSF011468 1 281 1.7E-169 T 29-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS13390 050e85c2c0280cdc84a4e429da1237a5 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 1.3E-105 T 29-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AM460_RS13390 050e85c2c0280cdc84a4e429da1237a5 586 Pfam PF00884 Sulfatase 260 500 1.8E-32 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS13390 050e85c2c0280cdc84a4e429da1237a5 586 PIRSF PIRSF004950 6 586 3.4E-223 T 29-03-2018 IPR012159 Inner membrane protein YejM AM460_RS13390 050e85c2c0280cdc84a4e429da1237a5 586 SUPERFAMILY SSF53649 257 570 8.64E-54 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS13390 050e85c2c0280cdc84a4e429da1237a5 586 Gene3D G3DSA:3.40.720.10 259 528 1.9E-32 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS03925 89f3aea0517086f53e892809582abde4 255 Pfam PF09339 IclR helix-turn-helix domain 14 61 3.2E-7 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS03925 89f3aea0517086f53e892809582abde4 255 SUPERFAMILY SSF55781 75 247 1.77E-43 T 29-03-2018 IPR029016 GAF domain-like AM460_RS03925 89f3aea0517086f53e892809582abde4 255 Gene3D G3DSA:1.10.10.10 1 69 1.1E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03925 89f3aea0517086f53e892809582abde4 255 SUPERFAMILY SSF46785 12 82 2.69E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03925 89f3aea0517086f53e892809582abde4 255 Gene3D G3DSA:3.30.450.40 74 249 1.6E-45 T 29-03-2018 IPR029016 GAF domain-like AM460_RS03925 89f3aea0517086f53e892809582abde4 255 SMART SM00346 11 98 3.8E-18 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS03925 89f3aea0517086f53e892809582abde4 255 Pfam PF01614 Bacterial transcriptional regulator 128 243 3.4E-21 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS06635 7033524c6835105f1e9a884500a6b723 72 SUPERFAMILY SSF118001 1 71 1.07E-29 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM460_RS06635 7033524c6835105f1e9a884500a6b723 72 PIRSF PIRSF006169 1 72 7.9E-38 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM460_RS06635 7033524c6835105f1e9a884500a6b723 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 6.0E-30 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM460_RS06635 7033524c6835105f1e9a884500a6b723 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 7.0E-36 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM460_RS06635 7033524c6835105f1e9a884500a6b723 72 Gene3D G3DSA:1.10.10.610 1 71 7.2E-37 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM460_RS06635 7033524c6835105f1e9a884500a6b723 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 26.528 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM460_RS12140 51338001f93630492f422d924db495ec 295 PIRSF PIRSF018982 46 295 2.3E-103 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM460_RS12140 51338001f93630492f422d924db495ec 295 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 65 293 1.0E-78 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM460_RS12140 51338001f93630492f422d924db495ec 295 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 57 294 40.782 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SMART SM01134 74 234 3.5E-51 T 29-03-2018 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Pfam PF00455 DeoR C terminal sensor domain 76 233 1.7E-44 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Gene3D G3DSA:1.10.10.10 1 63 1.3E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Gene3D G3DSA:3.40.50.1360 67 242 7.0E-29 T 29-03-2018 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SMART SM00420 5 57 1.4E-22 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 2.2E-21 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SUPERFAMILY SSF100950 76 233 1.15E-27 T 29-03-2018 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.5E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.5E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10245 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SUPERFAMILY SSF46785 4 59 2.34E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13685 cf828f0d18cecabb953f818dd3813651 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 475 1.3E-81 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM460_RS13685 cf828f0d18cecabb953f818dd3813651 478 Pfam PF02321 Outer membrane efflux protein 69 266 2.0E-18 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS13685 cf828f0d18cecabb953f818dd3813651 478 Pfam PF02321 Outer membrane efflux protein 293 473 9.2E-13 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS13685 cf828f0d18cecabb953f818dd3813651 478 SUPERFAMILY SSF56954 7 476 3.14E-75 T 29-03-2018 AM460_RS13685 cf828f0d18cecabb953f818dd3813651 478 Gene3D G3DSA:1.20.1600.10 23 478 2.0E-61 T 29-03-2018 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 27.008 T 29-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 1.3E-109 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 1.0E-117 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 5.3E-30 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.3E-30 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 5.3E-30 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 4.8E-69 T 29-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Pfam PF14849 YidC periplasmic domain 61 343 2.9E-89 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM460_RS04670 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Pfam PF02096 60Kd inner membrane protein 354 533 1.2E-60 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM460_RS14770 5e27651ab9c8b7f067df64a8822f24f9 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 1.3E-84 T 29-03-2018 IPR015304 ZinT domain GO:0008270 AM460_RS14770 5e27651ab9c8b7f067df64a8822f24f9 216 Gene3D G3DSA:2.40.128.20 29 216 2.1E-67 T 29-03-2018 IPR012674 Calycin AM460_RS14770 5e27651ab9c8b7f067df64a8822f24f9 216 SUPERFAMILY SSF50814 31 216 2.35E-80 T 29-03-2018 IPR012674 Calycin AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 SMART SM00382 344 514 4.3E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 SMART SM00382 28 230 7.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 Gene3D G3DSA:3.40.50.300 6 80 4.7E-9 T 29-03-2018 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 Gene3D G3DSA:3.40.50.300 88 290 3.5E-44 T 29-03-2018 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 Pfam PF00005 ABC transporter 336 469 1.7E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 Pfam PF00005 ABC transporter 19 185 2.0E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 Pfam PF12848 ABC transporter 224 294 1.1E-11 T 29-03-2018 IPR032781 ABC-transporter extension domain AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 Pfam PF16326 ABC transporter C-terminal domain 561 629 4.8E-20 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 Gene3D G3DSA:3.40.50.300 291 551 2.1E-58 T 29-03-2018 AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 SUPERFAMILY SSF52540 311 501 5.08E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20795 2c7512c3d71a3f249f4cc775a884e8d3 635 SUPERFAMILY SSF52540 9 239 2.04E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 229 258 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 SUPERFAMILY SSF47005 321 366 2.22E-13 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 SUPERFAMILY SSF51230 206 298 1.31E-23 T 29-03-2018 IPR011053 Single hybrid motif AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 180 630 5.6E-243 T 29-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 2.5E-79 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 SUPERFAMILY SSF51230 105 197 3.4E-24 T 29-03-2018 IPR011053 Single hybrid motif AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:3.90.1170.30 267 314 0.019 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:2.40.50.100 202 266 1.2E-17 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:3.30.559.10 386 630 1.3E-78 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:4.10.320.10 318 380 2.0E-20 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:2.40.50.100 8 58 8.9E-14 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:2.40.50.100 106 162 2.7E-16 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:2.40.50.100 59 105 3.1E-7 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 SUPERFAMILY SSF52777 388 629 8.45E-80 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Gene3D G3DSA:2.40.50.100 163 201 4.5E-7 T 29-03-2018 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Pfam PF02817 e3 binding domain 327 362 2.1E-15 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 SUPERFAMILY SSF51230 1 93 5.23E-23 T 29-03-2018 IPR011053 Single hybrid motif AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Pfam PF00364 Biotin-requiring enzyme 207 277 4.2E-22 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Pfam PF00364 Biotin-requiring enzyme 107 176 6.4E-23 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM460_RS25765 66d3b0e4c0b617d032331b39c59719cf 630 Pfam PF00364 Biotin-requiring enzyme 4 73 1.8E-21 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM460_RS18165 ae7ea6e3e3cc7308a8c6c01efb999c3d 387 Gene3D G3DSA:1.20.1250.20 194 386 6.0E-17 T 29-03-2018 AM460_RS18165 ae7ea6e3e3cc7308a8c6c01efb999c3d 387 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 378 1.6E-83 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM460_RS18165 ae7ea6e3e3cc7308a8c6c01efb999c3d 387 Gene3D G3DSA:1.20.1250.20 2 193 2.9E-31 T 29-03-2018 AM460_RS18165 ae7ea6e3e3cc7308a8c6c01efb999c3d 387 SUPERFAMILY SSF103473 8 379 1.11E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS18165 ae7ea6e3e3cc7308a8c6c01efb999c3d 387 Pfam PF07690 Major Facilitator Superfamily 15 352 2.1E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS10655 7308b39b685b56eea863c60546cfcc7d 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 154 178 7.8E-7 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10655 7308b39b685b56eea863c60546cfcc7d 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 7.8E-7 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10655 7308b39b685b56eea863c60546cfcc7d 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 7.8E-7 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10655 7308b39b685b56eea863c60546cfcc7d 608 Pfam PF00361 Proton-conducting membrane transporter 124 404 2.1E-38 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS07920 ad5bcd7b402b24d5bfed294325b5cd3b 233 Gene3D G3DSA:2.60.120.10 12 134 2.4E-23 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS07920 ad5bcd7b402b24d5bfed294325b5cd3b 233 Pfam PF02678 Pirin 4 119 1.3E-23 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM460_RS07920 ad5bcd7b402b24d5bfed294325b5cd3b 233 PIRSF PIRSF006232 1 230 1.4E-33 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM460_RS07920 ad5bcd7b402b24d5bfed294325b5cd3b 233 Gene3D G3DSA:2.60.120.10 135 233 1.6E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS07920 ad5bcd7b402b24d5bfed294325b5cd3b 233 SUPERFAMILY SSF51182 1 231 1.21E-45 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 Gene3D G3DSA:3.40.1410.10 91 247 1.3E-34 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 Pfam PF07702 UTRA domain 108 242 3.0E-35 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 Gene3D G3DSA:1.10.10.10 1 88 8.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 SMART SM00866 107 243 6.5E-32 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 SUPERFAMILY SSF46785 20 90 3.14E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 SMART SM00345 28 87 2.0E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 7.4E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 7.4E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 SUPERFAMILY SSF64288 75 246 6.28E-40 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS13880 ae770c31d10cd4c02b338447493c8474 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 87 4.0E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS18550 e827a6487ab5c5ff88fd91ab4c2054a7 187 Pfam PF03592 Terminase small subunit 2 56 5.2E-9 T 29-03-2018 IPR005335 Terminase small subunit GO:0006323 AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 29-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SUPERFAMILY SSF50998 161 521 2.09E-157 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SUPERFAMILY SSF50998 557 792 2.09E-157 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Gene3D G3DSA:2.140.10.10 158 607 5.1E-86 T 29-03-2018 AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Gene3D G3DSA:2.140.10.10 657 790 1.4E-13 T 29-03-2018 AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SMART SM00564 339 380 0.16 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SMART SM00564 715 748 0.04 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SMART SM00564 401 458 310.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SMART SM00564 479 512 480.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SMART SM00564 282 314 210.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 SMART SM00564 220 251 2.4E-6 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Pfam PF01011 PQQ enzyme repeat 289 322 2.8E-4 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Pfam PF01011 PQQ enzyme repeat 442 468 1.0E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Pfam PF01011 PQQ enzyme repeat 664 696 1.8E-7 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Pfam PF01011 PQQ enzyme repeat 225 258 6.1E-8 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Pfam PF01011 PQQ enzyme repeat 362 387 2.1E-4 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 Pfam PF01011 PQQ enzyme repeat 721 758 4.0E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 167 195 - T 29-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM460_RS25715 6d0d524790982619b6a9be07f0e9a0f8 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 29-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM460_RS03570 d6b23d8c863404052a66c14c355c8791 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.325 T 29-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 AM460_RS03570 d6b23d8c863404052a66c14c355c8791 104 SUPERFAMILY SSF54909 1 104 1.88E-37 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS03570 d6b23d8c863404052a66c14c355c8791 104 Gene3D G3DSA:3.30.70.100 2 101 4.2E-4 T 29-03-2018 AM460_RS03570 d6b23d8c863404052a66c14c355c8791 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 1.7E-57 T 29-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 AM460_RS03570 d6b23d8c863404052a66c14c355c8791 104 Pfam PF05336 L-rhamnose mutarotase 3 103 3.7E-29 T 29-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.4E-69 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 SUPERFAMILY SSF53732 380 859 6.8E-150 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 SUPERFAMILY SSF74778 2 160 7.98E-70 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 Gene3D G3DSA:3.20.19.10 162 363 6.1E-35 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 PIRSF PIRSF036687 1 859 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 Gene3D G3DSA:3.30.499.10 683 865 3.3E-54 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 5.6E-40 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 Gene3D G3DSA:3.40.1060.10 521 682 5.8E-27 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 Gene3D G3DSA:3.30.499.10 402 520 2.2E-10 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 SUPERFAMILY SSF52016 163 371 9.16E-73 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM460_RS25745 97540d65f0ac58c27322110cf75707c9 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.2E-99 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 Gene3D G3DSA:1.10.260.40 4 55 2.1E-20 T 29-03-2018 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 29-03-2018 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 SUPERFAMILY SSF47413 2 61 7.74E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 5.1E-22 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 SUPERFAMILY SSF53822 61 326 5.3E-55 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 3.3E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 3.3E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 Pfam PF13377 Periplasmic binding protein-like domain 171 329 1.2E-32 T 29-03-2018 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 Gene3D G3DSA:3.40.50.2300 56 177 5.6E-23 T 29-03-2018 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 Gene3D G3DSA:3.40.50.2300 178 313 4.5E-41 T 29-03-2018 AM460_RS24610 eaa203b58d42009e8fab82dd82f4f367 360 SMART SM00354 3 73 1.3E-33 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS27305 c778a6602bb9d2954f40816d368e905b 187 SUPERFAMILY SSF141571 8 183 1.67E-33 T 29-03-2018 AM460_RS27305 c778a6602bb9d2954f40816d368e905b 187 Gene3D G3DSA:2.160.20.80 1 187 1.7E-27 T 29-03-2018 AM460_RS27305 c778a6602bb9d2954f40816d368e905b 187 Pfam PF13599 Pentapeptide repeats (9 copies) 88 153 2.5E-11 T 29-03-2018 IPR001646 Pentapeptide repeat AM460_RS27305 c778a6602bb9d2954f40816d368e905b 187 Pfam PF13599 Pentapeptide repeats (9 copies) 25 80 1.3E-7 T 29-03-2018 IPR001646 Pentapeptide repeat AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 Gene3D G3DSA:3.10.580.10 205 326 4.9E-18 T 29-03-2018 AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 Pfam PF01380 SIS domain 46 177 9.6E-36 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 PIRSF PIRSF004692 1 328 9.2E-136 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 SUPERFAMILY SSF53697 14 325 4.45E-68 T 29-03-2018 AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 Gene3D G3DSA:3.40.50.10490 11 204 2.2E-55 T 29-03-2018 AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 3.3E-135 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 Pfam PF00571 CBS domain 206 261 6.6E-5 T 29-03-2018 IPR000644 CBS domain AM460_RS07465 6f1a50071c3b526adab8384d2f3d4af5 328 Pfam PF00571 CBS domain 274 325 2.0E-5 T 29-03-2018 IPR000644 CBS domain AM460_RS27100 9632f081b39fb43279e201cb0f05e01e 229 Gene3D G3DSA:1.10.10.10 175 215 6.4E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27100 9632f081b39fb43279e201cb0f05e01e 229 Gene3D G3DSA:1.10.10.60 127 174 0.0019 T 29-03-2018 AM460_RS27100 9632f081b39fb43279e201cb0f05e01e 229 SUPERFAMILY SSF46894 157 215 2.28E-7 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS27100 9632f081b39fb43279e201cb0f05e01e 229 PIRSF PIRSF003267 1 229 3.2E-109 T 29-03-2018 IPR016383 Plasmid transfer regulator TraJ AM460_RS07485 e49f79e31d9df52e18a789af3b13a1f3 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 1.0E-55 T 29-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AM460_RS07485 e49f79e31d9df52e18a789af3b13a1f3 183 Pfam PF02470 MlaD protein 39 116 1.3E-21 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS01715 03ad1a8e2bb1763eb360261859cc30d0 163 Gene3D G3DSA:1.10.260.40 11 79 7.3E-13 T 29-03-2018 AM460_RS01715 03ad1a8e2bb1763eb360261859cc30d0 163 Pfam PF13560 Helix-turn-helix domain 18 75 3.4E-11 T 29-03-2018 AM460_RS01715 03ad1a8e2bb1763eb360261859cc30d0 163 SUPERFAMILY SSF47413 10 75 8.73E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS01715 03ad1a8e2bb1763eb360261859cc30d0 163 SMART SM00530 22 77 1.1E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1800.10 1267 1313 7.2E-12 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 19 269 2.1E-51 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 270 645 1.9E-80 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 646 713 2.2E-14 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 29-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.100 715 795 1.0E-27 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.150 814 949 4.1E-29 T 29-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 29-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 5.4E-15 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 2.3E-7 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.373 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 6.0E-28 T 29-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.3E-58 T 29-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 343 939 0.0 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 11 226 0.0 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 29-03-2018 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 29-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.4E-160 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.270.10 1020 1242 3.0E-81 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS03110 5a6db54270d33f1e4bfa723559a235e2 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 147 2.4E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 Pfam PF00593 TonB dependent receptor 231 658 1.6E-41 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 Gene3D G3DSA:2.40.170.20 156 660 7.2E-68 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 660 2.6E-135 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 SUPERFAMILY SSF56935 30 660 3.97E-102 T 29-03-2018 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 Gene3D G3DSA:2.170.130.10 24 155 9.2E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 30 660 5.6E-177 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM460_RS05835 fbba8093acfd3a696d6e13200acd798d 660 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 Gene3D G3DSA:1.20.120.530 108 243 5.4E-19 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 2.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 2.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 83 6.8E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 Gene3D G3DSA:1.10.10.10 12 89 7.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 SMART SM00895 115 239 9.0E-13 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 SUPERFAMILY SSF46785 22 91 4.22E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 SMART SM00345 28 87 2.2E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 Pfam PF07729 FCD domain 115 237 1.5E-18 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS09020 0e8b4de21458ebb881d95c87d7f56ef8 244 SUPERFAMILY SSF48008 111 238 7.32E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS03335 0c24c67af69fb8d800edcaddd8db39ec 220 SUPERFAMILY SSF51569 1 216 4.08E-65 T 29-03-2018 AM460_RS03335 0c24c67af69fb8d800edcaddd8db39ec 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 52.425 T 29-03-2018 IPR023001 Fructose-6-phosphate aldolase GO:0016832 AM460_RS03335 0c24c67af69fb8d800edcaddd8db39ec 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 3.6E-106 T 29-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM460_RS03335 0c24c67af69fb8d800edcaddd8db39ec 220 Gene3D G3DSA:3.20.20.70 1 220 2.3E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03335 0c24c67af69fb8d800edcaddd8db39ec 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS03335 0c24c67af69fb8d800edcaddd8db39ec 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 9.8E-48 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS03335 0c24c67af69fb8d800edcaddd8db39ec 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS05780 c63df2d6fa215d9a94c1d1e7e43a60d9 110 SUPERFAMILY SSF47752 30 108 2.48E-43 T 29-03-2018 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 AM460_RS05780 c63df2d6fa215d9a94c1d1e7e43a60d9 110 Pfam PF06411 HdeA/HdeB family 12 96 7.2E-26 T 29-03-2018 IPR010486 HNS-dependent expression A/B AM460_RS05780 c63df2d6fa215d9a94c1d1e7e43a60d9 110 PIRSF PIRSF009564 1 107 3.0E-60 T 29-03-2018 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 AM460_RS05780 c63df2d6fa215d9a94c1d1e7e43a60d9 110 Gene3D G3DSA:1.10.890.10 27 101 6.1E-26 T 29-03-2018 AM460_RS05780 c63df2d6fa215d9a94c1d1e7e43a60d9 110 ProDom PD065392 HDEA PRECURSOR SIGNAL PERIPLASMIC 3D-STRUCTURE DIRECT 10K-S SEQUENCING 38 108 2.0E-34 T 29-03-2018 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 AM460_RS05780 c63df2d6fa215d9a94c1d1e7e43a60d9 110 Hamap MF_00946 Acid stress chaperone HdeA [hdeA]. 1 106 35.189 T 29-03-2018 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 SUPERFAMILY SSF53448 378 393 8.76E-78 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 SUPERFAMILY SSF53448 20 294 8.76E-78 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 7.2E-157 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 Pfam PF00483 Nucleotidyl transferase 22 291 3.3E-69 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.816 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 Gene3D G3DSA:2.160.10.10 336 419 6.9E-7 T 29-03-2018 AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 SUPERFAMILY SSF51161 313 411 2.65E-18 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS06245 87443ed830637dbe5391e91ee648d89d 431 Gene3D G3DSA:3.90.550.10 20 335 4.1E-66 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS23455 e8cfad378685e4560076ed24b3d369f6 271 SUPERFAMILY SSF52540 8 233 1.36E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23455 e8cfad378685e4560076ed24b3d369f6 271 Pfam PF00005 ABC transporter 24 171 4.7E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS23455 e8cfad378685e4560076ed24b3d369f6 271 Gene3D G3DSA:3.40.50.300 2 241 1.3E-56 T 29-03-2018 AM460_RS23455 e8cfad378685e4560076ed24b3d369f6 271 SMART SM00382 32 229 7.4E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS23455 e8cfad378685e4560076ed24b3d369f6 271 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 SUPERFAMILY SSF46689 231 279 2.78E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 Pfam PF12833 Helix-turn-helix domain 200 278 5.0E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 Pfam PF02311 AraC-like ligand binding domain 23 160 1.8E-26 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 SUPERFAMILY SSF46689 176 227 4.39E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 Gene3D G3DSA:1.10.10.60 176 229 1.8E-12 T 29-03-2018 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 SUPERFAMILY SSF51215 8 163 1.7E-38 T 29-03-2018 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 Gene3D G3DSA:1.10.10.60 230 280 3.7E-12 T 29-03-2018 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 Gene3D G3DSA:2.60.120.280 7 170 7.7E-26 T 29-03-2018 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 SMART SM00342 194 277 7.6E-32 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS26090 33f3a4a4b9b4a933053e0fc395a73a51 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 Pfam PF01565 FAD binding domain 52 192 9.5E-38 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 Gene3D G3DSA:3.30.43.10 4 104 9.9E-19 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 SUPERFAMILY SSF56176 18 282 2.71E-54 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 Gene3D G3DSA:3.30.465.10 105 304 1.2E-43 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 SUPERFAMILY SSF55103 258 542 5.72E-53 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 5.6E-66 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 Gene3D G3DSA:1.10.45.10 473 539 1.1E-9 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 SUPERFAMILY SSF46548 655 691 2.51E-8 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 SUPERFAMILY SSF46548 519 622 2.51E-8 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 1.1E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS16605 828b9bbaab2471b31b75b1d6ca32dfaa 1018 Gene3D G3DSA:1.10.1060.10 547 703 1.9E-13 T 29-03-2018 AM460_RS18885 463c8897a817385de9b9df8b714f933c 152 Gene3D G3DSA:3.10.450.50 3 130 8.6E-41 T 29-03-2018 AM460_RS18885 463c8897a817385de9b9df8b714f933c 152 Gene3D G3DSA:3.10.450.50 136 152 0.11 T 29-03-2018 AM460_RS18885 463c8897a817385de9b9df8b714f933c 152 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 30.215 T 29-03-2018 IPR023006 Uncharacterised protein family UPF0225 AM460_RS18885 463c8897a817385de9b9df8b714f933c 152 Pfam PF02810 SEC-C motif 134 152 5.9E-11 T 29-03-2018 IPR004027 SEC-C motif AM460_RS18885 463c8897a817385de9b9df8b714f933c 152 Pfam PF02810 SEC-C motif 3 19 1.1E-4 T 29-03-2018 IPR004027 SEC-C motif AM460_RS18885 463c8897a817385de9b9df8b714f933c 152 SUPERFAMILY SSF54427 25 129 1.21E-37 T 29-03-2018 IPR032710 NTF2-like domain AM460_RS18885 463c8897a817385de9b9df8b714f933c 152 SUPERFAMILY SSF103642 132 151 4.41E-8 T 29-03-2018 AM460_RS21700 66397a6fe4a802e16b9200cdac8044cb 130 Gene3D G3DSA:3.30.1380.10 1 123 5.1E-24 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM460_RS21700 66397a6fe4a802e16b9200cdac8044cb 130 SUPERFAMILY SSF55166 5 124 7.32E-27 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM460_RS21700 66397a6fe4a802e16b9200cdac8044cb 130 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 57 123 1.5E-16 T 29-03-2018 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:3.40.50.10490 1 144 5.1E-50 T 29-03-2018 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:3.40.50.10490 145 258 9.9E-55 T 29-03-2018 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.0E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.0E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.0E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.0E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.0E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.0E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:1.10.1390.10 513 549 6.9E-22 T 29-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:3.40.50.10490 259 512 1.1E-125 T 29-03-2018 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 Pfam PF00342 Phosphoglucose isomerase 52 541 1.0E-258 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 SUPERFAMILY SSF53697 5 548 7.79E-230 T 29-03-2018 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS02865 1a3d36d0671a334f1f6181bded5ccf90 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 43.34 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS14845 e463060f1d1389b4bb91f341fbe49000 306 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 20 281 2.3E-71 T 29-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AM460_RS14845 e463060f1d1389b4bb91f341fbe49000 306 SUPERFAMILY SSF103481 43 144 9.55E-11 T 29-03-2018 AM460_RS14845 e463060f1d1389b4bb91f341fbe49000 306 SUPERFAMILY SSF103481 196 287 7.19E-11 T 29-03-2018 AM460_RS14845 e463060f1d1389b4bb91f341fbe49000 306 Pfam PF00892 EamA-like transporter family 150 284 7.6E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS14845 e463060f1d1389b4bb91f341fbe49000 306 Pfam PF00892 EamA-like transporter family 14 140 9.2E-24 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 SUPERFAMILY SSF52540 348 582 1.94E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 SMART SM00382 375 560 4.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 SUPERFAMILY SSF90123 11 331 3.92E-54 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 Gene3D G3DSA:3.40.50.300 337 588 9.5E-60 T 29-03-2018 AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 Pfam PF00664 ABC transporter transmembrane region 26 291 2.3E-49 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 Pfam PF00005 ABC transporter 369 513 1.2E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 5.7E-189 T 29-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AM460_RS21855 58e73297d334bf4cfc3d55de643eb26c 588 Gene3D G3DSA:1.20.1560.10 6 336 3.7E-41 T 29-03-2018 AM460_RS12235 4aac05317a8102d6f20dd92634c9557f 283 SUPERFAMILY SSF53613 18 274 1.56E-59 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS12235 4aac05317a8102d6f20dd92634c9557f 283 Gene3D G3DSA:3.40.1190.20 13 272 1.1E-48 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS12235 4aac05317a8102d6f20dd92634c9557f 283 Hamap MF_01638 Pyridoxine/pyridoxal/pyridoxamine kinase [pdxK]. 1 283 55.625 T 29-03-2018 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AM460_RS12235 4aac05317a8102d6f20dd92634c9557f 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 16 275 2.9E-51 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM460_RS12235 4aac05317a8102d6f20dd92634c9557f 283 Pfam PF08543 Phosphomethylpyrimidine kinase 88 265 2.8E-25 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM460_RS16885 6bab66c98e2127398b2fef4b35165a1a 287 Gene3D G3DSA:3.40.1190.20 1 287 3.5E-64 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS16885 6bab66c98e2127398b2fef4b35165a1a 287 Pfam PF08543 Phosphomethylpyrimidine kinase 68 256 1.1E-15 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM460_RS16885 6bab66c98e2127398b2fef4b35165a1a 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 286 2.4E-146 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM460_RS16885 6bab66c98e2127398b2fef4b35165a1a 287 SUPERFAMILY SSF53613 1 281 8.73E-78 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS16885 6bab66c98e2127398b2fef4b35165a1a 287 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 2 287 54.491 T 29-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 1.6E-93 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 Pfam PF02378 Phosphotransferase system, EIIC 110 395 1.2E-48 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 448 6.3E-196 T 29-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 Pfam PF00367 phosphotransferase system, EIIB 9 41 6.9E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 Gene3D G3DSA:3.30.1360.60 4 81 4.8E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 2.4E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS10395 797901f40f311cd715551ba7d800adeb 456 SUPERFAMILY SSF55604 6 81 5.23E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS05890 e639bbf9356eb1b367d4a2a19f75bd92 680 Pfam PF01432 Peptidase family M3 222 677 2.5E-177 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM460_RS05890 e639bbf9356eb1b367d4a2a19f75bd92 680 Gene3D G3DSA:1.20.1050.40 4 138 7.2E-38 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AM460_RS05890 e639bbf9356eb1b367d4a2a19f75bd92 680 Gene3D G3DSA:1.10.1370.10 457 680 1.6E-69 T 29-03-2018 AM460_RS05890 e639bbf9356eb1b367d4a2a19f75bd92 680 Gene3D G3DSA:1.10.1370.10 140 444 1.7E-60 T 29-03-2018 AM460_RS05890 e639bbf9356eb1b367d4a2a19f75bd92 680 SUPERFAMILY SSF55486 1 677 6.72E-215 T 29-03-2018 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 Gene3D G3DSA:3.40.50.720 3 83 0.0018 T 29-03-2018 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 SUPERFAMILY SSF51905 312 374 1.76E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 SUPERFAMILY SSF51905 1 260 1.76E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 492 3.2E-12 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 SUPERFAMILY SSF54373 226 319 2.16E-6 T 29-03-2018 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 Gene3D G3DSA:3.30.9.10 182 320 4.7E-39 T 29-03-2018 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 Gene3D G3DSA:3.30.9.10 84 181 7.0E-17 T 29-03-2018 AM460_RS06275 3fdb924a2d1f502a4ee8c59f3c3875dc 501 Pfam PF01266 FAD dependent oxidoreductase 5 323 9.1E-49 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM460_RS25970 60e578c177a169cec19325fad173e260 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 2.2E-136 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS25970 60e578c177a169cec19325fad173e260 313 PIRSF PIRSF004486 1 312 2.8E-104 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS25970 60e578c177a169cec19325fad173e260 313 Gene3D G3DSA:1.10.150.170 112 215 6.1E-38 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS25970 60e578c177a169cec19325fad173e260 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.581 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS25970 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF53335 7 113 3.63E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS25970 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF53335 213 310 3.63E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS25970 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF81799 114 213 5.75E-36 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS25970 60e578c177a169cec19325fad173e260 313 Pfam PF01795 MraW methylase family 5 310 5.8E-124 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS27560 2c79252cc754568f29885d45f7e966e3 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 7 25 4.6E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27560 2c79252cc754568f29885d45f7e966e3 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 27 49 4.6E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27560 2c79252cc754568f29885d45f7e966e3 52 Pfam PF01848 Hok/gef family 8 48 3.3E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27560 2c79252cc754568f29885d45f7e966e3 52 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 12 31 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS27560 2c79252cc754568f29885d45f7e966e3 52 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 3 50 2.0E-21 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27140 2c79252cc754568f29885d45f7e966e3 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 7 25 4.6E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27140 2c79252cc754568f29885d45f7e966e3 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 27 49 4.6E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27140 2c79252cc754568f29885d45f7e966e3 52 Pfam PF01848 Hok/gef family 8 48 3.3E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27140 2c79252cc754568f29885d45f7e966e3 52 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 12 31 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS27140 2c79252cc754568f29885d45f7e966e3 52 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 3 50 2.0E-21 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS12965 73900e087a77eefd73021c9b3abd0767 167 Gene3D G3DSA:3.40.1760.10 1 166 5.6E-33 T 29-03-2018 IPR015068 Protein of unknown function DUF1877 AM460_RS12965 73900e087a77eefd73021c9b3abd0767 167 Pfam PF08974 Domain of unknown function (DUF1877) 1 163 1.9E-33 T 29-03-2018 IPR015068 Protein of unknown function DUF1877 AM460_RS12965 73900e087a77eefd73021c9b3abd0767 167 SUPERFAMILY SSF111069 3 165 7.98E-56 T 29-03-2018 IPR015068 Protein of unknown function DUF1877 AM460_RS00350 2ca54c0e367dfc2d3525b9ad42f6fdd1 273 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 114 192 5.9E-15 T 29-03-2018 IPR006528 Phage head morphogenesis domain AM460_RS00350 2ca54c0e367dfc2d3525b9ad42f6fdd1 273 Pfam PF04233 Phage Mu protein F like protein 59 190 5.3E-29 T 29-03-2018 IPR006528 Phage head morphogenesis domain AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 SUPERFAMILY SSF46785 1 86 1.72E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 Gene3D G3DSA:3.40.190.10 175 264 3.3E-21 T 29-03-2018 AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 Gene3D G3DSA:1.10.10.10 1 86 2.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 Gene3D G3DSA:3.40.190.10 89 174 2.3E-15 T 29-03-2018 AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 Pfam PF03466 LysR substrate binding domain 88 286 1.5E-41 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS02565 d03dd8e799e152cb0ea1a009bd190c92 294 SUPERFAMILY SSF53850 90 289 2.81E-39 T 29-03-2018 AM460_RS06765 4b4d6b046e63e399719b6e1d48f494ba 195 SUPERFAMILY SSF54523 40 176 3.03E-22 T 29-03-2018 AM460_RS06765 4b4d6b046e63e399719b6e1d48f494ba 195 Pfam PF11612 Type II secretion system (T2SS), protein J 58 172 6.6E-7 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AM460_RS06765 4b4d6b046e63e399719b6e1d48f494ba 195 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06765 4b4d6b046e63e399719b6e1d48f494ba 195 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 3.1E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06765 4b4d6b046e63e399719b6e1d48f494ba 195 Gene3D G3DSA:2.10.70.20 128 177 7.6E-4 T 29-03-2018 AM460_RS06765 4b4d6b046e63e399719b6e1d48f494ba 195 Gene3D G3DSA:3.10.610.10 38 127 1.5E-14 T 29-03-2018 AM460_RS06765 4b4d6b046e63e399719b6e1d48f494ba 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.9E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS27810 8e4014832d44489261465d25ee5141e4 507 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 35 423 2.3E-102 T 29-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM460_RS27810 8e4014832d44489261465d25ee5141e4 507 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 91 337 4.5E-37 T 29-03-2018 IPR000477 Reverse transcriptase domain AM460_RS27810 8e4014832d44489261465d25ee5141e4 507 SUPERFAMILY SSF56672 45 244 1.04E-48 T 29-03-2018 AM460_RS27810 8e4014832d44489261465d25ee5141e4 507 SUPERFAMILY SSF56672 273 343 1.04E-48 T 29-03-2018 AM460_RS27810 8e4014832d44489261465d25ee5141e4 507 Pfam PF08388 Group II intron, maturase-specific domain 360 426 3.7E-11 T 29-03-2018 IPR013597 Group II intron, maturase-specific AM460_RS27810 8e4014832d44489261465d25ee5141e4 507 Gene3D G3DSA:3.30.70.270 123 337 9.6E-32 T 29-03-2018 AM460_RS13030 f35df5d74df1ed61459d655e5bb8b046 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 20.384 T 29-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF AM460_RS13030 f35df5d74df1ed61459d655e5bb8b046 128 SUPERFAMILY SSF103481 47 124 2.09E-5 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82693 565 661 1.55E-17 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Gene3D G3DSA:3.30.2090.10 190 275 2.7E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Gene3D G3DSA:3.30.2090.10 717 804 3.2E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82866 800 1028 1.09E-45 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.692 T 29-03-2018 IPR022831 Multidrug resistance protein MdtB AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82693 49 138 1.65E-23 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Gene3D G3DSA:1.20.1640.10 276 501 8.5E-44 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Gene3D G3DSA:1.20.1640.10 824 1025 5.5E-36 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Gene3D G3DSA:3.30.70.1430 49 150 1.7E-24 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82714 192 275 8.5E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 Gene3D G3DSA:3.30.70.1430 567 666 2.2E-15 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82693 146 191 1.57E-21 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82693 277 333 1.57E-21 T 29-03-2018 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.2E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82714 719 800 7.59E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS13985 1f713b4947c0b9ef8a95d62211fbc46b 1040 SUPERFAMILY SSF82866 299 498 6.67E-45 T 29-03-2018 AM460_RS24605 1c0fce73559391de5e9b6b1408f53b73 277 Pfam PF09339 IclR helix-turn-helix domain 15 63 6.8E-14 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS24605 1c0fce73559391de5e9b6b1408f53b73 277 Gene3D G3DSA:1.10.10.10 3 83 4.3E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24605 1c0fce73559391de5e9b6b1408f53b73 277 SUPERFAMILY SSF46785 13 83 2.36E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24605 1c0fce73559391de5e9b6b1408f53b73 277 SMART SM00346 12 102 2.5E-30 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS24605 1c0fce73559391de5e9b6b1408f53b73 277 Pfam PF01614 Bacterial transcriptional regulator 135 257 1.3E-12 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS24605 1c0fce73559391de5e9b6b1408f53b73 277 SUPERFAMILY SSF55781 85 257 2.12E-26 T 29-03-2018 IPR029016 GAF domain-like AM460_RS24605 1c0fce73559391de5e9b6b1408f53b73 277 Gene3D G3DSA:3.30.450.40 84 266 1.2E-30 T 29-03-2018 IPR029016 GAF domain-like AM460_RS25355 78921246262a5771174ba4db0353b5ec 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 3.5E-34 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 AM460_RS25355 78921246262a5771174ba4db0353b5ec 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 27.209 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 AM460_RS25355 78921246262a5771174ba4db0353b5ec 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 5.0E-27 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 AM460_RS21065 6bf8b936a22adbd07f4af8605c43bbf9 118 SUPERFAMILY SSF47413 3 69 4.29E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS21065 6bf8b936a22adbd07f4af8605c43bbf9 118 SMART SM00530 8 63 3.0E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS21065 6bf8b936a22adbd07f4af8605c43bbf9 118 Pfam PF12844 Helix-turn-helix domain 6 66 3.1E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS21065 6bf8b936a22adbd07f4af8605c43bbf9 118 Gene3D G3DSA:1.10.260.40 1 105 3.2E-20 T 29-03-2018 AM460_RS16230 5c1259e21faa2555234d52efe47fe775 511 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 346 503 5.7E-8 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS16230 5c1259e21faa2555234d52efe47fe775 511 SUPERFAMILY SSF161098 307 497 1.96E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS16230 5c1259e21faa2555234d52efe47fe775 511 Gene3D G3DSA:1.10.3720.10 1 268 8.9E-16 T 29-03-2018 AM460_RS16230 5c1259e21faa2555234d52efe47fe775 511 SUPERFAMILY SSF161098 8 255 3.05E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS16230 5c1259e21faa2555234d52efe47fe775 511 Gene3D G3DSA:1.10.3720.10 285 507 8.1E-14 T 29-03-2018 AM460_RS00650 0d24e53e664b42d15e8b5631258896c9 318 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 1.6E-50 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM460_RS00650 0d24e53e664b42d15e8b5631258896c9 318 Gene3D G3DSA:3.40.50.300 1 202 6.9E-45 T 29-03-2018 AM460_RS00650 0d24e53e664b42d15e8b5631258896c9 318 SMART SM00833 224 317 1.3E-10 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM460_RS00650 0d24e53e664b42d15e8b5631258896c9 318 SUPERFAMILY SSF52540 2 201 1.38E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00650 0d24e53e664b42d15e8b5631258896c9 318 Gene3D G3DSA:3.30.1220.10 209 318 1.9E-21 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM460_RS00650 0d24e53e664b42d15e8b5631258896c9 318 SUPERFAMILY SSF90002 224 315 2.48E-25 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM460_RS00650 0d24e53e664b42d15e8b5631258896c9 318 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 315 9.5E-19 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM460_RS20235 4f0f401d3b1ae8677a2b1d1587832661 194 Gene3D G3DSA:3.40.630.30 9 192 5.8E-30 T 29-03-2018 AM460_RS20235 4f0f401d3b1ae8677a2b1d1587832661 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 3.5E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS20235 4f0f401d3b1ae8677a2b1d1587832661 194 SUPERFAMILY SSF55729 12 185 5.51E-42 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS26055 b863c1434b86178ee672c36f281a3656 232 SUPERFAMILY SSF52540 1 222 7.35E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS26055 b863c1434b86178ee672c36f281a3656 232 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 2.6E-118 T 29-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 AM460_RS26055 b863c1434b86178ee672c36f281a3656 232 Gene3D G3DSA:3.40.50.300 2 229 2.0E-60 T 29-03-2018 AM460_RS26055 b863c1434b86178ee672c36f281a3656 232 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS26055 b863c1434b86178ee672c36f281a3656 232 SMART SM00382 24 209 2.9E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS26055 b863c1434b86178ee672c36f281a3656 232 Pfam PF00005 ABC transporter 18 157 1.1E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS23100 b74ca26f5aed98de482ee40c041ab0b3 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 478 8.4E-40 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS23100 b74ca26f5aed98de482ee40c041ab0b3 512 SUPERFAMILY SSF56317 216 490 6.02E-37 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS23100 b74ca26f5aed98de482ee40c041ab0b3 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.18 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM460_RS23100 b74ca26f5aed98de482ee40c041ab0b3 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 2.6E-123 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM460_RS23100 b74ca26f5aed98de482ee40c041ab0b3 512 Gene3D G3DSA:3.60.110.10 219 480 4.0E-37 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:3.40.50.2300 168 332 1.0E-19 T 29-03-2018 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 2.4E-156 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 SMART SM00354 1 73 7.4E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 SUPERFAMILY SSF53822 60 314 2.94E-42 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:1.10.260.40 1 56 7.6E-20 T 29-03-2018 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:3.40.50.2300 57 167 2.5E-26 T 29-03-2018 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 29-03-2018 AM460_RS25985 33ee5c7827cf4687d3786823d4b545b0 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 4.7E-14 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM460_RS02495 c2ac0ff978cbe4e1bbc7f4a605764977 198 Gene3D G3DSA:1.25.40.10 55 114 4.7E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS02495 c2ac0ff978cbe4e1bbc7f4a605764977 198 Gene3D G3DSA:1.25.40.10 115 194 5.1E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS02495 c2ac0ff978cbe4e1bbc7f4a605764977 198 SUPERFAMILY SSF48452 62 175 5.31E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS02495 c2ac0ff978cbe4e1bbc7f4a605764977 198 SMART SM00028 73 106 0.0061 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS02495 c2ac0ff978cbe4e1bbc7f4a605764977 198 SMART SM00028 144 177 25.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS02495 c2ac0ff978cbe4e1bbc7f4a605764977 198 SMART SM00028 107 143 400.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS08820 ff28222a7d9165cdef9efaf536c66f5f 65 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 4 65 1.5E-39 T 29-03-2018 IPR009301 Protein of unknown function DUF957 AM460_RS20905 a165b9a1483ef48e8d6a6958a2d9c239 234 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 234 48.637 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM460_RS20905 a165b9a1483ef48e8d6a6958a2d9c239 234 Pfam PF04288 MukE-like family 10 230 5.0E-126 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM460_RS27250 f1aa90ccd10461451dd694ff1e3ab4c7 300 SUPERFAMILY SSF160940 1 274 6.67E-115 T 29-03-2018 AM460_RS27250 f1aa90ccd10461451dd694ff1e3ab4c7 300 Pfam PF06924 Protein of unknown function (DUF1281) 3 132 4.5E-35 T 29-03-2018 IPR009694 Protein of unknown function DUF1281 AM460_RS27250 f1aa90ccd10461451dd694ff1e3ab4c7 300 Gene3D G3DSA:1.10.3530.10 23 199 1.7E-77 T 29-03-2018 IPR023136 Api92-like domain AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 PIRSF PIRSF036289 1 741 1.1E-228 T 29-03-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 Gene3D G3DSA:2.70.98.40 1 242 3.0E-50 T 29-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 Gene3D G3DSA:1.50.10.10 292 662 3.4E-99 T 29-03-2018 AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 Gene3D G3DSA:2.60.420.10 663 731 1.5E-14 T 29-03-2018 AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 9 237 5.9E-48 T 29-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 SUPERFAMILY SSF48208 250 719 2.52E-108 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 681 725 1.0E-9 T 29-03-2018 IPR005194 Glycoside hydrolase family 65, C-terminal AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 SUPERFAMILY SSF74650 6 240 1.66E-52 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS18055 d6ff6d0c3e4cd98211e1bb5fceb41614 755 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 298 677 1.5E-150 T 29-03-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 AM460_RS27680 be22ad8576cddfe12f3b8a115a0ea700 300 Pfam PF06924 Protein of unknown function (DUF1281) 2 132 9.6E-38 T 29-03-2018 IPR009694 Protein of unknown function DUF1281 AM460_RS27680 be22ad8576cddfe12f3b8a115a0ea700 300 Gene3D G3DSA:1.10.3530.10 23 199 3.4E-80 T 29-03-2018 IPR023136 Api92-like domain AM460_RS27680 be22ad8576cddfe12f3b8a115a0ea700 300 SUPERFAMILY SSF160940 1 274 1.27E-117 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 413 2.8E-70 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 Gene3D G3DSA:1.20.1250.20 255 469 1.5E-22 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 SUPERFAMILY SSF103473 244 451 5.75E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 SUPERFAMILY SSF103473 8 194 5.75E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 53.986 T 29-03-2018 IPR023721 Multidrug resistance protein MdtD, putative AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.0E-8 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 4.0E-8 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.0E-8 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.0E-8 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 4.0E-8 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 Gene3D G3DSA:1.20.1250.20 6 196 4.8E-33 T 29-03-2018 AM460_RS13975 547b8902490fa0dd474fe1fe4d30eca9 471 Pfam PF07690 Major Facilitator Superfamily 15 405 9.6E-49 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS00540 f04ed009f117c44c90eddcdc45df139a 137 PIRSF PIRSF029225 2 131 2.9E-49 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS00540 f04ed009f117c44c90eddcdc45df139a 137 Gene3D G3DSA:3.40.50.10220 35 129 6.2E-34 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS00540 f04ed009f117c44c90eddcdc45df139a 137 Pfam PF03603 DNA polymerase III psi subunit 3 127 3.1E-44 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS00540 f04ed009f117c44c90eddcdc45df139a 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 1.0E-45 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS00540 f04ed009f117c44c90eddcdc45df139a 137 SUPERFAMILY SSF102220 27 135 1.57E-34 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS00540 f04ed009f117c44c90eddcdc45df139a 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 1.5E-61 T 29-03-2018 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS10450 b7ba818232d889b7cc77f092b15e236f 86 SUPERFAMILY SSF54862 32 84 3.49E-9 T 29-03-2018 AM460_RS10450 b7ba818232d889b7cc77f092b15e236f 86 PIRSF PIRSF036548 2 86 5.6E-25 T 29-03-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 AM460_RS10450 b7ba818232d889b7cc77f092b15e236f 86 Gene3D G3DSA:3.30.70.20 56 77 0.046 T 29-03-2018 AM460_RS10450 b7ba818232d889b7cc77f092b15e236f 86 Gene3D G3DSA:3.30.70.20 15 55 2.1E-4 T 29-03-2018 AM460_RS03975 42f17d67c9114605b39ec8da99fe9ff2 519 SUPERFAMILY SSF52210 353 511 4.3E-8 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS03975 42f17d67c9114605b39ec8da99fe9ff2 519 Pfam PF00549 CoA-ligase 350 507 6.6E-55 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS03975 42f17d67c9114605b39ec8da99fe9ff2 519 SUPERFAMILY SSF52210 183 314 6.15E-18 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS03975 42f17d67c9114605b39ec8da99fe9ff2 519 Gene3D G3DSA:3.40.50.720 58 168 1.6E-4 T 29-03-2018 AM460_RS03975 42f17d67c9114605b39ec8da99fe9ff2 519 Gene3D G3DSA:3.40.50.261 169 519 7.2E-35 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS03975 42f17d67c9114605b39ec8da99fe9ff2 519 Pfam PF02629 CoA binding domain 189 284 4.8E-12 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS20570 bc2458c0b8bfc59e4332cf99f613a2bc 199 Pfam PF02613 Nitrate reductase delta subunit 49 169 1.9E-23 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS20570 bc2458c0b8bfc59e4332cf99f613a2bc 199 Hamap MF_01150 Chaperone protein TorD [torD]. 1 199 31.118 T 29-03-2018 IPR023069 Chaperone TorD AM460_RS20570 bc2458c0b8bfc59e4332cf99f613a2bc 199 Gene3D G3DSA:1.10.3480.10 2 198 9.1E-33 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS20570 bc2458c0b8bfc59e4332cf99f613a2bc 199 SUPERFAMILY SSF89155 7 197 4.45E-42 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS05340 2eb4d4d1aa0ba658069d79dab81ab1c0 286 SUPERFAMILY SSF51658 14 277 7.59E-56 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS05340 2eb4d4d1aa0ba658069d79dab81ab1c0 286 Pfam PF01261 Xylose isomerase-like TIM barrel 25 234 1.7E-36 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS05340 2eb4d4d1aa0ba658069d79dab81ab1c0 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 286 3.6E-157 T 29-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AM460_RS05340 2eb4d4d1aa0ba658069d79dab81ab1c0 286 Gene3D G3DSA:3.20.20.150 1 285 8.2E-55 T 29-03-2018 AM460_RS19790 73f88757c322ec82207c66f7b76583d8 339 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 53 145 1.7E-23 T 29-03-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 AM460_RS19790 73f88757c322ec82207c66f7b76583d8 339 Pfam PF04492 Bacteriophage replication protein O 51 145 1.8E-32 T 29-03-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 AM460_RS10270 55e8a6c9dcf10fd338ad148871d44a6f 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 6.5E-134 T 29-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 AM460_RS10270 55e8a6c9dcf10fd338ad148871d44a6f 215 SMART SM01007 8 182 1.8E-69 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS10270 55e8a6c9dcf10fd338ad148871d44a6f 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 62.238 T 29-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 AM460_RS10270 55e8a6c9dcf10fd338ad148871d44a6f 215 SUPERFAMILY SSF53639 1 212 1.51E-70 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS10270 55e8a6c9dcf10fd338ad148871d44a6f 215 Gene3D G3DSA:3.40.225.10 1 213 1.9E-61 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS10270 55e8a6c9dcf10fd338ad148871d44a6f 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 5.0E-49 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS08760 d6cfe4982301a073e75db4a4a959564b 221 Pfam PF00005 ABC transporter 22 153 2.2E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS08760 d6cfe4982301a073e75db4a4a959564b 221 SUPERFAMILY SSF52540 2 212 1.78E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS08760 d6cfe4982301a073e75db4a4a959564b 221 SMART SM00382 30 209 2.9E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS08760 d6cfe4982301a073e75db4a4a959564b 221 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS08760 d6cfe4982301a073e75db4a4a959564b 221 Gene3D G3DSA:3.40.50.300 1 221 1.3E-38 T 29-03-2018 AM460_RS26285 9b645bb4da5c24a326dc2063b5c3faf4 149 Gene3D G3DSA:3.10.50.40 2 149 1.4E-21 T 29-03-2018 AM460_RS26285 9b645bb4da5c24a326dc2063b5c3faf4 149 SUPERFAMILY SSF54534 5 143 7.66E-37 T 29-03-2018 AM460_RS26285 9b645bb4da5c24a326dc2063b5c3faf4 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 2.3E-15 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM460_RS20740 ef35632d395031900110094af17074ac 209 SUPERFAMILY SSF159894 13 107 1.44E-26 T 29-03-2018 AM460_RS20740 ef35632d395031900110094af17074ac 209 Pfam PF04994 TfoX C-terminal domain 116 194 3.9E-26 T 29-03-2018 IPR007077 TfoX, C-terminal AM460_RS20740 ef35632d395031900110094af17074ac 209 Gene3D G3DSA:1.10.150.20 117 195 9.1E-16 T 29-03-2018 AM460_RS20740 ef35632d395031900110094af17074ac 209 Gene3D G3DSA:3.30.1460.30 8 108 2.8E-18 T 29-03-2018 AM460_RS20740 ef35632d395031900110094af17074ac 209 PIRSF PIRSF028788 1 205 1.0E-55 T 29-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AM460_RS20740 ef35632d395031900110094af17074ac 209 Pfam PF04993 TfoX N-terminal domain 14 106 1.3E-25 T 29-03-2018 IPR007076 TfoX, N-terminal AM460_RS04075 7dd21fe7171c9e259c7ece19b5ba22f4 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 5.2E-15 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM460_RS04075 7dd21fe7171c9e259c7ece19b5ba22f4 155 Pfam PF03061 Thioesterase superfamily 57 145 1.0E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM460_RS04075 7dd21fe7171c9e259c7ece19b5ba22f4 155 SUPERFAMILY SSF54637 12 154 1.1E-25 T 29-03-2018 IPR029069 HotDog domain AM460_RS04075 7dd21fe7171c9e259c7ece19b5ba22f4 155 Gene3D G3DSA:3.10.129.10 7 154 8.5E-29 T 29-03-2018 AM460_RS17490 bfbeb77b80b0541ad438801006afa8b7 71 Pfam PF10684 Putative biofilm-dependent modulation protein 1 71 2.8E-52 T 29-03-2018 IPR019625 Biofilm-dependent modulation protein Bdm, putative AM460_RS19380 4cadab66002966e572b0f506cc4bd25c 153 PIRSF PIRSF006173 3 150 2.6E-68 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM460_RS19380 4cadab66002966e572b0f506cc4bd25c 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 150 42.67 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM460_RS19380 4cadab66002966e572b0f506cc4bd25c 153 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 2.9E-8 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 Gene3D G3DSA:2.40.50.100 60 138 3.7E-14 T 29-03-2018 AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 57 107 9.68E-8 T 29-03-2018 AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 136 178 9.68E-8 T 29-03-2018 AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 345 2.5E-18 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 1.5E-13 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 3.2E-149 T 29-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 Gene3D G3DSA:1.10.287.470 139 186 4.0E-7 T 29-03-2018 AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 Gene3D G3DSA:2.40.50.100 209 361 1.8E-6 T 29-03-2018 AM460_RS10860 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 195 268 7.85E-8 T 29-03-2018 AM460_RS12960 4e61f4990888ff483eea44f8c378b922 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.1E-91 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12960 4e61f4990888ff483eea44f8c378b922 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 6.7E-150 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM460_RS12960 4e61f4990888ff483eea44f8c378b922 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.865 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 Pfam PF00005 ABC transporter 29 178 2.4E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 Pfam PF00005 ABC transporter 280 434 1.9E-17 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 SMART SM00382 38 225 2.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 SMART SM00382 288 483 0.7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 Gene3D G3DSA:3.40.50.300 2 242 1.4E-51 T 29-03-2018 AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 SUPERFAMILY SSF52540 253 485 2.47E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 Gene3D G3DSA:3.40.50.300 262 502 1.6E-32 T 29-03-2018 AM460_RS13620 38227236d2c9bb4c96df870887fd6654 506 SUPERFAMILY SSF52540 12 236 7.84E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05745 e3ab30301330cd528c196bf259260fb2 242 Pfam PF12833 Helix-turn-helix domain 158 234 3.2E-12 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS05745 e3ab30301330cd528c196bf259260fb2 242 SMART SM00342 152 234 1.6E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS05745 e3ab30301330cd528c196bf259260fb2 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 203 218 9.8E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05745 e3ab30301330cd528c196bf259260fb2 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 218 234 9.8E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS05745 e3ab30301330cd528c196bf259260fb2 242 Gene3D G3DSA:1.10.10.60 186 237 8.4E-14 T 29-03-2018 AM460_RS05745 e3ab30301330cd528c196bf259260fb2 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 188 230 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS05745 e3ab30301330cd528c196bf259260fb2 242 SUPERFAMILY SSF46689 188 235 6.72E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 5.2E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.7E-219 T 29-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 Gene3D G3DSA:3.30.390.30 332 450 6.2E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 Gene3D G3DSA:3.50.50.60 1 162 4.9E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.8E-28 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.8E-28 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 3.8E-28 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.8E-28 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.8E-28 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 SUPERFAMILY SSF55424 336 450 1.07E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.2E-66 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 SUPERFAMILY SSF51905 1 365 9.79E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 PIRSF PIRSF000350 1 447 3.8E-87 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 Gene3D G3DSA:3.40.50.720 163 331 7.1E-36 T 29-03-2018 AM460_RS05880 272a64df06d191885af3f5a82013a817 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 4.1E-35 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM460_RS22485 5adfc32c620373e38308e89f4358b1d3 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 327 1.2E-87 T 29-03-2018 IPR019405 Lactonase, 7-bladed beta propeller AM460_RS22485 5adfc32c620373e38308e89f4358b1d3 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 56.289 T 29-03-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AM460_RS22485 5adfc32c620373e38308e89f4358b1d3 331 SUPERFAMILY SSF50974 3 292 9.94E-53 T 29-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM460_RS22485 5adfc32c620373e38308e89f4358b1d3 331 Gene3D G3DSA:2.130.10.10 1 331 7.7E-56 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Gene3D G3DSA:2.30.40.10 2 68 6.1E-22 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Pfam PF01979 Amidohydrolase family 50 431 7.2E-22 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 SUPERFAMILY SSF51556 54 379 1.83E-100 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Hamap MF_01645 Allantoinase [allB]. 2 450 53.936 T 29-03-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 SUPERFAMILY SSF51338 378 448 1.15E-29 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 SUPERFAMILY SSF51338 3 53 1.15E-29 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Gene3D G3DSA:3.20.20.140 69 399 2.8E-104 T 29-03-2018 AM460_RS23775 1e50cc2d7d20cbac7a7c0c493800f0b9 453 TIGRFAM TIGR03178 allantoinase: allantoinase 4 449 3.8E-204 T 29-03-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 PIRSF PIRSF000980 1 1122 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1087 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 SUPERFAMILY SSF52540 359 813 3.51E-109 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 Gene3D G3DSA:3.40.50.300 671 778 0.0011 T 29-03-2018 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 Gene3D G3DSA:1.10.486.10 442 650 2.2E-70 T 29-03-2018 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 SUPERFAMILY SSF52540 1 347 1.27E-129 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 806 0.0 T 29-03-2018 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1122 21.244 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 Gene3D G3DSA:1.10.10.160 86 185 1.2E-31 T 29-03-2018 AM460_RS09990 756ba8b24d23d65807c67329c05932a5 1122 SUPERFAMILY SSF52980 820 1120 4.72E-100 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS00015 8f158a2176994d5b108d0435f186b138 497 SUPERFAMILY SSF53649 29 478 2.33E-123 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS00015 8f158a2176994d5b108d0435f186b138 497 ProSitePatterns PS00523 Sulfatases signature 1. 77 89 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM460_RS00015 8f158a2176994d5b108d0435f186b138 497 Pfam PF00884 Sulfatase 31 377 6.5E-71 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS00015 8f158a2176994d5b108d0435f186b138 497 Gene3D G3DSA:3.30.1120.10 409 486 4.6E-15 T 29-03-2018 AM460_RS00015 8f158a2176994d5b108d0435f186b138 497 Gene3D G3DSA:3.40.720.10 30 408 3.8E-91 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS01750 8838739247924dcae4f380ecd9da19e5 228 SUPERFAMILY SSF53639 2 219 1.96E-70 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS01750 8838739247924dcae4f380ecd9da19e5 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 65.76 T 29-03-2018 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM460_RS01750 8838739247924dcae4f380ecd9da19e5 228 SMART SM01007 6 194 1.4E-68 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS01750 8838739247924dcae4f380ecd9da19e5 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 7.4E-48 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS01750 8838739247924dcae4f380ecd9da19e5 228 Gene3D G3DSA:3.40.225.10 1 227 1.6E-60 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS01465 3691bc3a112b689e4110d399f97fdaaf 44 PIRSF PIRSF003249 1 44 7.1E-36 T 29-03-2018 IPR012602 PyrBI operon leader peptide GO:0019856 AM460_RS01465 3691bc3a112b689e4110d399f97fdaaf 44 Pfam PF08052 PyrBI operon leader peptide 1 44 2.2E-34 T 29-03-2018 IPR012602 PyrBI operon leader peptide GO:0019856 AM460_RS19060 ce602d92f283b37fcf89ad74cf54739b 559 SUPERFAMILY SSF52091 452 557 1.06E-14 T 29-03-2018 IPR002645 STAS domain AM460_RS19060 ce602d92f283b37fcf89ad74cf54739b 559 TIGRFAM TIGR00815 sulP: sulfate permease 18 555 1.7E-150 T 29-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AM460_RS19060 ce602d92f283b37fcf89ad74cf54739b 559 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 29-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AM460_RS19060 ce602d92f283b37fcf89ad74cf54739b 559 Pfam PF01740 STAS domain 453 553 9.5E-12 T 29-03-2018 IPR002645 STAS domain AM460_RS19060 ce602d92f283b37fcf89ad74cf54739b 559 Pfam PF00916 Sulfate permease family 29 411 1.6E-75 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM460_RS19060 ce602d92f283b37fcf89ad74cf54739b 559 Gene3D G3DSA:3.30.750.24 442 559 3.9E-14 T 29-03-2018 IPR002645 STAS domain AM460_RS10950 d2d9c993ce837bf3e0411e867137bcdf 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 7.3E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM460_RS10950 d2d9c993ce837bf3e0411e867137bcdf 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 7.3E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM460_RS10950 d2d9c993ce837bf3e0411e867137bcdf 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 7.3E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM460_RS10950 d2d9c993ce837bf3e0411e867137bcdf 99 SUPERFAMILY SSF46785 11 98 5.75E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10950 d2d9c993ce837bf3e0411e867137bcdf 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 8.5E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM460_RS10950 d2d9c993ce837bf3e0411e867137bcdf 99 SMART SM00418 16 95 1.5E-21 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM460_RS10950 d2d9c993ce837bf3e0411e867137bcdf 99 Gene3D G3DSA:1.10.10.10 1 96 8.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 Pfam PF13247 4Fe-4S dicluster domain 176 272 2.2E-37 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 437 4.7E-31 T 29-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 5 198 9.8E-29 T 29-03-2018 AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 238 365 5.7E-32 T 29-03-2018 AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 366 467 3.5E-31 T 29-03-2018 AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 0.0 T 29-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 199 237 1.6E-19 T 29-03-2018 AM460_RS18945 921d2776715fd61811f12cb3e082343e 512 SUPERFAMILY SSF54862 1 504 2.09E-188 T 29-03-2018 AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 SUPERFAMILY SSF54631 200 335 1.89E-22 T 29-03-2018 AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 Pfam PF01595 Domain of unknown function DUF21 7 197 4.0E-38 T 29-03-2018 IPR002550 Domain of unknown function DUF21 AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 Pfam PF03471 Transporter associated domain 347 425 1.7E-22 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 SMART SM01091 346 426 4.6E-30 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 Gene3D G3DSA:3.30.465.10 356 435 1.5E-24 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 SUPERFAMILY SSF56176 344 428 4.91E-24 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 Gene3D G3DSA:3.20.20.70 157 355 7.2E-22 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS01605 56c4bbc7819299baecb2e7542dad4b17 447 Pfam PF00571 CBS domain 284 333 0.0026 T 29-03-2018 IPR000644 CBS domain AM460_RS06830 a9eb05a116a704d31881e542cf92b1be 100 SUPERFAMILY SSF54189 6 97 2.66E-30 T 29-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06830 a9eb05a116a704d31881e542cf92b1be 100 Gene3D G3DSA:3.30.70.330 6 100 1.5E-30 T 29-03-2018 AM460_RS06830 a9eb05a116a704d31881e542cf92b1be 100 Pfam PF00276 Ribosomal protein L23 9 95 4.5E-31 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM460_RS06830 a9eb05a116a704d31881e542cf92b1be 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.603 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM460_RS06830 a9eb05a116a704d31881e542cf92b1be 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 29-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS16510 06fae8bc6a882323282c58129bdf9b9e 277 Gene3D G3DSA:3.40.50.300 192 274 1.7E-5 T 29-03-2018 AM460_RS16510 06fae8bc6a882323282c58129bdf9b9e 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 5.5E-73 T 29-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AM460_RS16510 06fae8bc6a882323282c58129bdf9b9e 277 Gene3D G3DSA:3.40.50.300 151 191 0.28 T 29-03-2018 AM460_RS16510 06fae8bc6a882323282c58129bdf9b9e 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.949 T 29-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AM460_RS25035 6c55e7b2a53cac944632469d85a4eb8e 415 Gene3D G3DSA:3.90.220.20 166 394 7.9E-26 T 29-03-2018 AM460_RS25035 6c55e7b2a53cac944632469d85a4eb8e 415 Gene3D G3DSA:3.90.220.20 2 165 2.4E-19 T 29-03-2018 AM460_RS25035 6c55e7b2a53cac944632469d85a4eb8e 415 Pfam PF01420 Type I restriction modification DNA specificity domain 5 174 3.1E-10 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM460_RS25035 6c55e7b2a53cac944632469d85a4eb8e 415 SUPERFAMILY SSF116734 4 187 2.29E-26 T 29-03-2018 AM460_RS25035 6c55e7b2a53cac944632469d85a4eb8e 415 SUPERFAMILY SSF116734 211 414 3.43E-25 T 29-03-2018 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 SUPERFAMILY SSF52141 6 220 8.5E-96 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.427 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.5E-90 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 29-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 Gene3D G3DSA:3.40.470.10 1 229 2.6E-106 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 SMART SM00986 49 210 6.6E-42 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 SMART SM00987 49 210 6.6E-42 T 29-03-2018 AM460_RS11490 35d7a2d10b951f150980061bac641849 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 3.0E-28 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 SUPERFAMILY SSF53383 2 396 1.9E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 7.4E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 7.4E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 7.4E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 7.4E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 Gene3D G3DSA:3.90.1150.10 293 397 3.1E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 Gene3D G3DSA:3.90.1150.10 1 67 4.2E-11 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 Pfam PF00155 Aminotransferase class I and II 27 392 2.9E-86 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS02690 ee815dab714dbd6b0927668fbd9b013f 397 Gene3D G3DSA:3.40.640.10 68 292 1.1E-29 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 SUPERFAMILY SSF54862 3 198 6.59E-71 T 29-03-2018 AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 3 80 1.1E-18 T 29-03-2018 AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 81 118 6.0E-21 T 29-03-2018 AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0023 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 119 201 1.7E-18 T 29-03-2018 AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 7.4E-80 T 29-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B AM460_RS17150 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 3.0E-29 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS15660 4eafa4dd231ab42707aecd09fe7a6ab5 200 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 9 184 3.1E-45 T 29-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM460_RS15660 4eafa4dd231ab42707aecd09fe7a6ab5 200 Gene3D G3DSA:3.90.1720.10 6 191 7.6E-23 T 29-03-2018 AM460_RS15660 4eafa4dd231ab42707aecd09fe7a6ab5 200 SUPERFAMILY SSF54001 9 185 8.34E-34 T 29-03-2018 AM460_RS00345 90ed363887725f8649680a9b773b533f 152 Pfam PF05069 Phage virion morphogenesis family 12 144 1.8E-22 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS00345 90ed363887725f8649680a9b773b533f 152 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 22 131 2.3E-16 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS21135 90ed363887725f8649680a9b773b533f 152 Pfam PF05069 Phage virion morphogenesis family 12 144 1.8E-22 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS21135 90ed363887725f8649680a9b773b533f 152 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 22 131 2.3E-16 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 8.0E-14 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 4.0E-41 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.1E-48 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.3E-30 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF46604 88 137 1.36E-15 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:1.20.5.440 91 131 1.6E-14 T 29-03-2018 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.752 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:2.60.15.10 1 90 1.9E-28 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04535 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF51344 3 86 2.09E-25 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 29-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 SMART SM01400 4 121 5.7E-76 T 29-03-2018 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 Gene3D G3DSA:3.40.50.2020 1 152 8.5E-66 T 29-03-2018 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.7E-127 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 Gene3D G3DSA:3.40.50.2020 153 307 7.2E-43 T 29-03-2018 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 SUPERFAMILY SSF53271 69 306 5.83E-67 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS19050 55b665c7de7d2354089745562edafe6c 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.757 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 Pfam PF01938 TRAM domain 378 440 6.3E-21 T 29-03-2018 IPR002792 TRAM domain AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.4E-222 T 29-03-2018 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.2E-29 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 Pfam PF04055 Radical SAM superfamily 151 325 4.4E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 Gene3D G3DSA:3.80.30.20 144 381 4.3E-53 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 75.421 T 29-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 SMART SM00729 147 367 2.6E-64 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 SUPERFAMILY SSF102114 127 373 5.23E-64 T 29-03-2018 AM460_RS23080 9257de3a5505318c4de4bbdfd1246406 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.4E-159 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM460_RS02910 ab20af98c43bf5eaf536fa3df4f523d4 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 264 1.7E-127 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM460_RS02910 ab20af98c43bf5eaf536fa3df4f523d4 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 2.8E-72 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM460_RS07070 cf0176912c754a5b100808d0119401d5 367 SUPERFAMILY SSF161098 154 346 6.02E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS07070 cf0176912c754a5b100808d0119401d5 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 156 252 6.2E-20 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS07070 cf0176912c754a5b100808d0119401d5 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 360 2.6E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS07070 cf0176912c754a5b100808d0119401d5 367 Gene3D G3DSA:1.10.3720.10 35 365 2.0E-32 T 29-03-2018 AM460_RS20290 53e7a2a23a3f9ddd7fb23dcaa0e2785a 350 Pfam PF00581 Rhodanese-like domain 138 233 8.5E-14 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS20290 53e7a2a23a3f9ddd7fb23dcaa0e2785a 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.745 T 29-03-2018 IPR020936 Uncharacterised protein family UPF0176 AM460_RS20290 53e7a2a23a3f9ddd7fb23dcaa0e2785a 350 SMART SM00450 136 237 7.5E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS20290 53e7a2a23a3f9ddd7fb23dcaa0e2785a 350 Pfam PF12368 Rhodanase C-terminal 246 307 1.2E-18 T 29-03-2018 IPR022111 Rhodanase, C-terminal AM460_RS20290 53e7a2a23a3f9ddd7fb23dcaa0e2785a 350 SUPERFAMILY SSF52821 115 271 1.44E-32 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS20290 53e7a2a23a3f9ddd7fb23dcaa0e2785a 350 Gene3D G3DSA:3.40.250.10 130 243 3.9E-28 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS03935 b8c60937bd0d66f6c15d851b92a28f27 209 Gene3D G3DSA:3.20.20.70 1 208 8.6E-38 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03935 b8c60937bd0d66f6c15d851b92a28f27 209 Pfam PF01081 KDPG and KHG aldolase 6 184 5.0E-31 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM460_RS03935 b8c60937bd0d66f6c15d851b92a28f27 209 SUPERFAMILY SSF51569 3 202 1.57E-57 T 29-03-2018 AM460_RS05055 feb35986154e39890801aa18f00e00ae 406 SUPERFAMILY SSF52507 3 180 2.09E-57 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM460_RS05055 feb35986154e39890801aa18f00e00ae 406 Pfam PF02441 Flavoprotein 6 177 2.5E-41 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM460_RS05055 feb35986154e39890801aa18f00e00ae 406 SUPERFAMILY SSF102645 184 401 6.28E-80 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM460_RS05055 feb35986154e39890801aa18f00e00ae 406 Gene3D G3DSA:3.40.50.1950 1 183 2.1E-52 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM460_RS05055 feb35986154e39890801aa18f00e00ae 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 2.4E-73 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM460_RS05055 feb35986154e39890801aa18f00e00ae 406 Gene3D G3DSA:3.40.50.10300 184 405 1.5E-67 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM460_RS05055 feb35986154e39890801aa18f00e00ae 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 397 5.5E-165 T 29-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 Gene3D G3DSA:3.40.1800.10 529 617 2.4E-4 T 29-03-2018 AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 SMART SM00507 540 603 0.0096 T 29-03-2018 IPR003615 HNH nuclease AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 Pfam PF01348 Type II intron maturase 404 490 5.2E-10 T 29-03-2018 IPR024937 Domain X GO:0006397 AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 37 476 9.7E-92 T 29-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 89 235 2.6E-30 T 29-03-2018 IPR000477 Reverse transcriptase domain AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 305 367 9.0E-8 T 29-03-2018 IPR000477 Reverse transcriptase domain AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 Gene3D G3DSA:3.30.70.270 111 367 2.5E-39 T 29-03-2018 AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 SUPERFAMILY SSF56672 39 238 5.93E-51 T 29-03-2018 AM460_RS26825 df66fdc152b9b5fb5aaad5210fc17432 633 SUPERFAMILY SSF56672 304 373 5.93E-51 T 29-03-2018 AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 Gene3D G3DSA:3.40.190.10 98 194 5.8E-7 T 29-03-2018 AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 4.9E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 Hamap MF_01607 HTH-type transcriptional regulator YidZ [yidZ]. 1 319 73.399 T 29-03-2018 IPR023746 Transcription regulator HTH, YidZ GO:0003700|GO:0006355 AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 Gene3D G3DSA:1.10.10.10 2 88 6.4E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 SUPERFAMILY SSF46785 7 86 5.44E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 Gene3D G3DSA:3.40.190.10 195 281 1.9E-10 T 29-03-2018 AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 Pfam PF03466 LysR substrate binding domain 111 313 3.6E-16 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS04640 dc30130d28dcd5a506228b91c75fe2dd 319 SUPERFAMILY SSF53850 98 314 2.17E-27 T 29-03-2018 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.4E-74 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.0E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.0E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.0E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.0E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 Gene3D G3DSA:3.30.540.10 1 145 2.5E-49 T 29-03-2018 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 SUPERFAMILY SSF56655 1 261 2.36E-86 T 29-03-2018 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS11730 ccdb8a845e15184007f49a2366f7bc56 267 Gene3D G3DSA:3.40.190.80 146 267 5.4E-36 T 29-03-2018 AM460_RS21980 70563109a451dc689384814cec661e65 242 SMART SM00382 27 218 5.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21980 70563109a451dc689384814cec661e65 242 Gene3D G3DSA:3.40.50.300 1 242 6.7E-67 T 29-03-2018 AM460_RS21980 70563109a451dc689384814cec661e65 242 PIRSF PIRSF039085 1 242 1.0E-84 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM460_RS21980 70563109a451dc689384814cec661e65 242 Pfam PF00005 ABC transporter 20 170 5.1E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS21980 70563109a451dc689384814cec661e65 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS21980 70563109a451dc689384814cec661e65 242 SUPERFAMILY SSF52540 3 232 1.14E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:3.10.20.310 350 386 0.019 T 29-03-2018 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 810 26.299 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:3.10.20.310 92 174 4.2E-12 T 29-03-2018 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 PIRSF PIRSF006076 1 810 1.3E-259 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Pfam PF01103 Surface antigen 448 810 1.1E-104 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 810 1.6E-286 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:3.10.20.310 18 91 1.2E-8 T 29-03-2018 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:2.40.160.50 387 810 5.4E-87 T 29-03-2018 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:3.10.20.310 175 266 1.5E-20 T 29-03-2018 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:3.10.20.310 267 346 6.4E-12 T 29-03-2018 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 266 344 6.1E-11 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 348 421 3.7E-13 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 92 172 6.9E-11 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM460_RS25420 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 176 263 4.7E-15 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM460_RS16060 be668420c9b293ec33a5a9c5a90f33ad 167 SUPERFAMILY SSF55826 10 163 2.35E-35 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS16060 be668420c9b293ec33a5a9c5a90f33ad 167 Pfam PF04073 Aminoacyl-tRNA editing domain 30 154 1.8E-25 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS16060 be668420c9b293ec33a5a9c5a90f33ad 167 Gene3D G3DSA:3.90.960.10 4 167 8.1E-38 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS12130 d0bbdfb941f14f06699d92fff42f4223 467 SUPERFAMILY SSF53067 8 266 2.29E-8 T 29-03-2018 AM460_RS12130 d0bbdfb941f14f06699d92fff42f4223 467 Gene3D G3DSA:3.30.420.40 2 110 0.061 T 29-03-2018 AM460_RS12130 d0bbdfb941f14f06699d92fff42f4223 467 Pfam PF06277 Ethanolamine utilisation protein EutA 5 465 5.0E-178 T 29-03-2018 IPR009377 Ethanolamine utilisation EutA AM460_RS12130 d0bbdfb941f14f06699d92fff42f4223 467 Gene3D G3DSA:3.30.420.150 127 337 3.2E-8 T 29-03-2018 AM460_RS12130 d0bbdfb941f14f06699d92fff42f4223 467 PIRSF PIRSF012293 2 467 1.6E-211 T 29-03-2018 IPR009377 Ethanolamine utilisation EutA AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 Gene3D G3DSA:1.20.1250.20 241 473 2.3E-27 T 29-03-2018 AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 Gene3D G3DSA:1.20.1250.20 23 237 7.9E-24 T 29-03-2018 AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 SUPERFAMILY SSF103661 465 497 1.83E-12 T 29-03-2018 IPR015041 Osmosensory transporter coiled coil AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 Pfam PF00083 Sugar (and other) transporter 28 448 3.0E-76 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 SUPERFAMILY SSF103473 24 446 2.22E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 9.9E-23 T 29-03-2018 IPR015041 Osmosensory transporter coiled coil AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 432 2.5E-146 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM460_RS02280 8843164f7a68b5ac565b8af077bc0bc8 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS04230 228e931c54d9cdb1684e12b294b3b58f 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 64.039 T 29-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM460_RS04230 228e931c54d9cdb1684e12b294b3b58f 359 Gene3D G3DSA:3.40.50.2000 175 354 3.7E-4 T 29-03-2018 AM460_RS04230 228e931c54d9cdb1684e12b294b3b58f 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 4.4E-181 T 29-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM460_RS09585 3ffac543a835c2639bb794a09f903efa 351 Pfam PF01642 Methylmalonyl-CoA mutase 28 302 5.6E-114 T 29-03-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AM460_RS09585 3ffac543a835c2639bb794a09f903efa 351 Gene3D G3DSA:3.20.20.240 27 310 2.6E-117 T 29-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AM460_RS09585 3ffac543a835c2639bb794a09f903efa 351 SUPERFAMILY SSF51703 4 306 4.45E-113 T 29-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AM460_RS09585 3ffac543a835c2639bb794a09f903efa 351 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 302 2.0E-142 T 29-03-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 Pfam PF00202 Aminotransferase class-III 32 396 2.4E-80 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 SUPERFAMILY SSF53383 2 425 1.97E-138 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 109.013 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 Gene3D G3DSA:3.40.640.10 182 309 2.2E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 2.3E-207 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 Gene3D G3DSA:3.90.1150.10 310 426 7.5E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS25535 514767e791cd5e49a2139dddd3fe938d 426 Gene3D G3DSA:3.90.1150.10 1 181 8.0E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.460.10 208 341 3.9E-43 T 29-03-2018 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF55021 665 741 1.76E-14 T 29-03-2018 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF109604 27 207 3.77E-45 T 29-03-2018 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.70.260 660 741 2.4E-11 T 29-03-2018 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81271 399 465 5.07E-22 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13291 ACT domain 664 740 5.9E-18 T 29-03-2018 IPR002912 ACT domain AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81301 196 410 1.41E-63 T 29-03-2018 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13328 HD domain 44 191 3.7E-40 T 29-03-2018 IPR003607 HD/PDEase domain AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.10.20.30 400 475 9.6E-25 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 Pfam PF02824 TGS domain 406 465 4.5E-21 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 SMART SM00954 251 361 8.7E-66 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 2.1E-186 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 AM460_RS10350 49ff6fc65ed111112ee76be427a82132 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.7E-36 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 SUPERFAMILY SSF50129 5 144 6.39E-34 T 29-03-2018 IPR011032 GroES-like AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 Gene3D G3DSA:3.90.180.10 254 326 0.034 T 29-03-2018 AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 Pfam PF00107 Zinc-binding dehydrogenase 152 258 3.9E-29 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 6.8E-10 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 SMART SM00829 11 325 1.5E-26 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 Gene3D G3DSA:3.90.180.10 1 151 7.8E-40 T 29-03-2018 AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 SUPERFAMILY SSF51735 113 275 1.87E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS02740 6a2d68bd2af54ed5fae64092da7cd1ba 327 Gene3D G3DSA:3.40.50.720 152 251 1.4E-16 T 29-03-2018 AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 29-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 29-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 1.5E-40 T 29-03-2018 AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 Gene3D G3DSA:3.40.190.10 24 132 4.2E-17 T 29-03-2018 AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 SUPERFAMILY SSF53850 24 332 6.85E-81 T 29-03-2018 AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 Gene3D G3DSA:3.40.190.10 133 258 1.3E-23 T 29-03-2018 AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 Gene3D G3DSA:3.40.190.10 259 335 1.4E-16 T 29-03-2018 AM460_RS12205 2627dc07c5d056b410a8768c512f5157 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 332 2.3E-184 T 29-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM460_RS15690 5e314b5dec9369d3b0ed876ad0e66ed4 251 SUPERFAMILY SSF52540 4 215 3.53E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS15690 5e314b5dec9369d3b0ed876ad0e66ed4 251 SMART SM00382 29 199 8.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS15690 5e314b5dec9369d3b0ed876ad0e66ed4 251 Pfam PF00005 ABC transporter 20 149 2.8E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS15690 5e314b5dec9369d3b0ed876ad0e66ed4 251 Gene3D G3DSA:3.40.50.300 1 224 4.6E-56 T 29-03-2018 AM460_RS03565 b3d1e45bcdb2949eafa3f8c2703396cf 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 8.0E-35 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS03565 b3d1e45bcdb2949eafa3f8c2703396cf 274 Gene3D G3DSA:3.40.225.10 4 256 6.7E-50 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS03565 b3d1e45bcdb2949eafa3f8c2703396cf 274 SUPERFAMILY SSF53639 1 271 1.39E-78 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS03565 b3d1e45bcdb2949eafa3f8c2703396cf 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 58.0 T 29-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 AM460_RS03565 b3d1e45bcdb2949eafa3f8c2703396cf 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 1.6E-141 T 29-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 AM460_RS03565 b3d1e45bcdb2949eafa3f8c2703396cf 274 SMART SM01007 11 239 5.0E-32 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS09720 624394d41c7ef4e6f4ca54fe4e06f8b2 577 Gene3D G3DSA:3.90.1640.10 52 246 3.0E-23 T 29-03-2018 AM460_RS09720 624394d41c7ef4e6f4ca54fe4e06f8b2 577 Pfam PF01368 DHH family 74 201 8.0E-9 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS09720 624394d41c7ef4e6f4ca54fe4e06f8b2 577 SUPERFAMILY SSF64182 48 465 2.88E-117 T 29-03-2018 AM460_RS09720 624394d41c7ef4e6f4ca54fe4e06f8b2 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 2.9E-170 T 29-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AM460_RS09720 624394d41c7ef4e6f4ca54fe4e06f8b2 577 Pfam PF02272 DHHA1 domain 322 452 6.0E-26 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM460_RS16155 511869f621bc78ff5612d7b90280bdff 213 Pfam PF00857 Isochorismatase family 5 207 3.2E-37 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS16155 511869f621bc78ff5612d7b90280bdff 213 Gene3D G3DSA:3.40.50.850 2 213 7.8E-63 T 29-03-2018 AM460_RS16155 511869f621bc78ff5612d7b90280bdff 213 SUPERFAMILY SSF52499 4 208 2.22E-53 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS06150 c2349127de69e78f4b3a4573df91f82d 295 Gene3D G3DSA:1.10.3720.10 13 295 3.2E-46 T 29-03-2018 AM460_RS06150 c2349127de69e78f4b3a4573df91f82d 295 SUPERFAMILY SSF161098 56 282 2.22E-52 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06150 c2349127de69e78f4b3a4573df91f82d 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 5.3E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS27155 279f11084393b5a8f5f0c656de3572ca 654 Gene3D G3DSA:1.10.10.730 133 179 5.7E-8 T 29-03-2018 AM460_RS27155 279f11084393b5a8f5f0c656de3572ca 654 Pfam PF02195 ParB-like nuclease domain 37 131 4.6E-13 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS27155 279f11084393b5a8f5f0c656de3572ca 654 SUPERFAMILY SSF110849 37 134 4.19E-12 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS27155 279f11084393b5a8f5f0c656de3572ca 654 SMART SM00470 36 132 1.2E-21 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS27155 279f11084393b5a8f5f0c656de3572ca 654 Gene3D G3DSA:3.90.1530.10 27 132 3.7E-18 T 29-03-2018 AM460_RS27155 279f11084393b5a8f5f0c656de3572ca 654 SUPERFAMILY SSF109709 126 225 9.55E-21 T 29-03-2018 AM460_RS24235 dda9c79c9f296ab28095a6bd12234950 454 Gene3D G3DSA:1.20.1250.20 8 198 1.7E-32 T 29-03-2018 AM460_RS24235 dda9c79c9f296ab28095a6bd12234950 454 Pfam PF07690 Major Facilitator Superfamily 20 354 3.6E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS24235 dda9c79c9f296ab28095a6bd12234950 454 SUPERFAMILY SSF103473 6 391 8.11E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS24235 dda9c79c9f296ab28095a6bd12234950 454 Gene3D G3DSA:1.20.1250.20 199 392 7.7E-15 T 29-03-2018 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 SMART SM00448 2 115 1.0E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 5.7E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 SMART SM00421 147 204 2.4E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 Gene3D G3DSA:3.40.50.2300 1 125 7.0E-35 T 29-03-2018 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 Gene3D G3DSA:1.10.10.10 126 214 3.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 SUPERFAMILY SSF52172 3 161 1.46E-33 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS15100 eaebdbe1327c32fdcb12b491aa908681 218 Pfam PF00072 Response regulator receiver domain 4 115 9.7E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 Gene3D G3DSA:3.90.180.10 250 337 0.14 T 29-03-2018 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 Gene3D G3DSA:3.90.180.10 2 184 2.3E-49 T 29-03-2018 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 Gene3D G3DSA:3.40.50.20 185 249 3.3E-18 T 29-03-2018 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 SUPERFAMILY SSF51735 142 305 2.15E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 SMART SM00829 13 335 3.2E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 SUPERFAMILY SSF50129 2 184 2.89E-44 T 29-03-2018 IPR011032 GroES-like AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 2.3E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM460_RS01380 219bbc18f201e65fdf2b51023f9ac9d4 339 Pfam PF00107 Zinc-binding dehydrogenase 179 301 7.5E-22 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.888 T 29-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 2.0E-156 T 29-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 Gene3D G3DSA:1.10.1040.10 165 291 1.4E-30 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 SUPERFAMILY SSF48179 164 293 5.44E-37 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 5.0E-51 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 SUPERFAMILY SSF51735 2 164 1.83E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 Gene3D G3DSA:3.40.50.720 3 164 2.5E-36 T 29-03-2018 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 PIRSF PIRSF000103 1 295 3.2E-96 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM460_RS07830 ab218e9167f5803c7cb5fce7b176e4e6 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 5.5E-38 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM460_RS12100 4c230c6514cdc384596566f76e37b4e9 97 Pfam PF00936 BMC domain 3 78 8.1E-28 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12100 4c230c6514cdc384596566f76e37b4e9 97 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site AM460_RS12100 4c230c6514cdc384596566f76e37b4e9 97 SMART SM00877 2 78 9.9E-36 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12100 4c230c6514cdc384596566f76e37b4e9 97 SUPERFAMILY SSF143414 1 89 2.35E-31 T 29-03-2018 AM460_RS12100 4c230c6514cdc384596566f76e37b4e9 97 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 7.0E-19 T 29-03-2018 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 PIRSF PIRSF001535 1 572 4.5E-279 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 2.7E-283 T 29-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.5E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.5E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.5E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.5E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 Pfam PF03129 Anticodon binding domain 475 568 3.3E-21 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 SUPERFAMILY SSF52954 463 571 1.21E-33 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 SUPERFAMILY SSF55681 407 478 1.29E-109 T 29-03-2018 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 SUPERFAMILY SSF55681 10 237 1.29E-109 T 29-03-2018 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.326 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 Gene3D G3DSA:3.30.930.10 11 460 6.2E-102 T 29-03-2018 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 Gene3D G3DSA:3.40.50.800 461 572 3.6E-32 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 SUPERFAMILY SSF55826 218 390 1.01E-30 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 6.7E-49 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS25330 c698bf9f441c9a1d2c95347cbe1ae18e 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.5E-26 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM460_RS17130 e3bc3c3c0834444c01aa17078c383459 231 Gene3D G3DSA:3.40.50.300 2 214 1.1E-45 T 29-03-2018 AM460_RS17130 e3bc3c3c0834444c01aa17078c383459 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 220 23.964 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM460_RS17130 e3bc3c3c0834444c01aa17078c383459 231 SUPERFAMILY SSF52540 1 213 5.69E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS17130 e3bc3c3c0834444c01aa17078c383459 231 PIRSF PIRSF006755 1 225 6.5E-63 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM460_RS17130 e3bc3c3c0834444c01aa17078c383459 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 1.4E-39 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM460_RS17130 e3bc3c3c0834444c01aa17078c383459 231 Pfam PF13500 AAA domain 4 207 1.1E-28 T 29-03-2018 AM460_RS06655 62ab7da6ee5eada79ce79cadab54074f 184 Gene3D G3DSA:3.40.50.360 1 180 1.8E-31 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS06655 62ab7da6ee5eada79ce79cadab54074f 184 SUPERFAMILY SSF52218 6 177 1.44E-45 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS06655 62ab7da6ee5eada79ce79cadab54074f 184 Pfam PF02525 Flavodoxin-like fold 7 172 3.0E-39 T 29-03-2018 IPR003680 Flavodoxin-like fold AM460_RS06655 62ab7da6ee5eada79ce79cadab54074f 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 48.312 T 29-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM460_RS23315 9632fb63650dca2a6b4c11c594d85428 183 Hamap MF_00398 Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [citX]. 4 181 35.998 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AM460_RS23315 9632fb63650dca2a6b4c11c594d85428 183 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 13 175 2.7E-61 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AM460_RS23315 9632fb63650dca2a6b4c11c594d85428 183 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 13 176 6.8E-54 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AM460_RS17420 cba9079649040deb260b201e67105965 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 186 227 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS17420 cba9079649040deb260b201e67105965 253 Pfam PF12833 Helix-turn-helix domain 157 230 1.1E-14 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS17420 cba9079649040deb260b201e67105965 253 SUPERFAMILY SSF46689 186 235 1.52E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS17420 cba9079649040deb260b201e67105965 253 Gene3D G3DSA:1.10.10.60 87 181 0.02 T 29-03-2018 AM460_RS17420 cba9079649040deb260b201e67105965 253 SMART SM00342 150 231 1.8E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS17420 cba9079649040deb260b201e67105965 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 9.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS17420 cba9079649040deb260b201e67105965 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 9.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS17420 cba9079649040deb260b201e67105965 253 Gene3D G3DSA:1.10.10.60 182 240 2.1E-13 T 29-03-2018 AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 SMART SM01360 871 962 2.5E-19 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 Gene3D G3DSA:2.60.40.10 448 556 2.7E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 SMART SM01359 660 806 7.8E-29 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 Gene3D G3DSA:2.60.40.10 344 440 3.4E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 Pfam PF00207 Alpha-2-macroglobulin family 871 954 3.3E-15 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 660 806 7.6E-16 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 Gene3D G3DSA:2.60.40.10 563 667 3.7E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 Pfam PF01835 MG2 domain 344 440 2.1E-17 T 29-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 Gene3D G3DSA:2.60.40.10 757 918 2.6E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS13185 dc63af2fc6dc2077ba8a78bc0b6eee20 1534 SUPERFAMILY SSF48239 1057 1148 3.45E-5 T 29-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AM460_RS16430 b25627806d3260149a566800972d9875 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.361 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 Gene3D G3DSA:3.30.980.10 65 152 1.6E-22 T 29-03-2018 AM460_RS16430 b25627806d3260149a566800972d9875 642 Gene3D G3DSA:3.30.980.10 153 222 1.0E-15 T 29-03-2018 AM460_RS16430 b25627806d3260149a566800972d9875 642 Pfam PF02824 TGS domain 4 61 8.3E-13 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 SUPERFAMILY SSF55681 243 525 1.27E-96 T 29-03-2018 AM460_RS16430 b25627806d3260149a566800972d9875 642 SUPERFAMILY SSF81271 3 61 7.85E-17 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 Pfam PF03129 Anticodon binding domain 541 630 4.0E-24 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS16430 b25627806d3260149a566800972d9875 642 SUPERFAMILY SSF55186 63 241 1.83E-65 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM460_RS16430 b25627806d3260149a566800972d9875 642 Gene3D G3DSA:3.10.20.30 1 64 9.9E-20 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS16430 b25627806d3260149a566800972d9875 642 Gene3D G3DSA:3.30.930.10 223 531 2.2E-120 T 29-03-2018 AM460_RS16430 b25627806d3260149a566800972d9875 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.4E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.4E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.4E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.4E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.4E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM460_RS16430 b25627806d3260149a566800972d9875 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 219 4.4E-14 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM460_RS16430 b25627806d3260149a566800972d9875 642 Gene3D G3DSA:3.40.50.800 532 642 2.6E-30 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS16430 b25627806d3260149a566800972d9875 642 SUPERFAMILY SSF52954 530 636 2.27E-34 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS16430 b25627806d3260149a566800972d9875 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 7.0E-52 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS16430 b25627806d3260149a566800972d9875 642 SMART SM00863 170 219 4.6E-19 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM460_RS16430 b25627806d3260149a566800972d9875 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 7.4E-249 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM460_RS08510 4534eacc6e3c9a9c98c9869e5c638fe6 318 Gene3D G3DSA:1.10.10.60 263 318 2.7E-12 T 29-03-2018 AM460_RS08510 4534eacc6e3c9a9c98c9869e5c638fe6 318 Gene3D G3DSA:1.10.10.60 15 262 6.8E-15 T 29-03-2018 AM460_RS08510 4534eacc6e3c9a9c98c9869e5c638fe6 318 SUPERFAMILY SSF46689 262 312 4.48E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS08510 4534eacc6e3c9a9c98c9869e5c638fe6 318 Pfam PF06719 AraC-type transcriptional regulator N-terminus 47 197 7.6E-38 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM460_RS08510 4534eacc6e3c9a9c98c9869e5c638fe6 318 SMART SM00342 226 309 2.4E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS08510 4534eacc6e3c9a9c98c9869e5c638fe6 318 Pfam PF12833 Helix-turn-helix domain 232 307 1.8E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS08510 4534eacc6e3c9a9c98c9869e5c638fe6 318 SUPERFAMILY SSF46689 210 260 1.24E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS13735 215e7ea2c50c20530ccb6299b9d1c2a5 243 SUPERFAMILY SSF161098 46 233 1.22E-32 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS13735 215e7ea2c50c20530ccb6299b9d1c2a5 243 Gene3D G3DSA:1.10.3720.10 7 243 1.0E-26 T 29-03-2018 AM460_RS13735 215e7ea2c50c20530ccb6299b9d1c2a5 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 237 1.8E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 Gene3D G3DSA:3.40.50.2300 174 348 5.6E-20 T 29-03-2018 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 3.2E-69 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 3.2E-69 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 3.2E-69 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 3.2E-69 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 3.2E-69 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 3.2E-69 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 3.2E-69 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 SUPERFAMILY SSF53822 24 358 1.08E-88 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 Pfam PF13458 Periplasmic binding protein 26 344 4.8E-56 T 29-03-2018 IPR028081 Leucine-binding protein domain AM460_RS06100 5505e78e6999e03f3707b0b59fdd059f 367 Gene3D G3DSA:3.40.50.2300 22 173 8.7E-37 T 29-03-2018 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 Pfam PF00326 Prolyl oligopeptidase family 463 676 5.0E-69 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 SUPERFAMILY SSF53474 414 655 1.44E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 507 537 - T 29-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 SUPERFAMILY SSF50993 2 408 4.45E-82 T 29-03-2018 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 2.7E-54 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 2.7E-54 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 2.7E-54 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 2.7E-54 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 2.7E-54 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 2.7E-54 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 Gene3D G3DSA:3.40.50.1820 1 675 3.2E-78 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS15755 31cf5644853048b31e0fc04293cceec9 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 403 1.0E-117 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM460_RS25565 e8d20268799b269fd7454dc47cf50454 825 Pfam PF13954 PapC N-terminal domain 30 177 2.0E-27 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS25565 e8d20268799b269fd7454dc47cf50454 825 Pfam PF13953 PapC C-terminal domain 749 809 6.1E-15 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS25565 e8d20268799b269fd7454dc47cf50454 825 Pfam PF00577 Outer membrane usher protein 193 740 3.7E-179 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS25565 e8d20268799b269fd7454dc47cf50454 825 SUPERFAMILY SSF141729 55 169 6.54E-23 T 29-03-2018 AM460_RS02830 efa68eea5b3ecb8cb067d193aa297e33 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 287 1.7E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02830 efa68eea5b3ecb8cb067d193aa297e33 296 Gene3D G3DSA:1.10.3720.10 1 283 5.4E-44 T 29-03-2018 AM460_RS02830 efa68eea5b3ecb8cb067d193aa297e33 296 SUPERFAMILY SSF161098 8 296 1.87E-69 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 SUPERFAMILY SSF51735 10 243 8.72E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 Gene3D G3DSA:3.40.50.720 1 252 4.8E-61 T 29-03-2018 AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 197 8.6E-4 T 29-03-2018 AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 7.3E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 7.3E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.3E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 7.3E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 7.3E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.3E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18310 92c5573521e494eb0fb4b356d6805e9c 252 Pfam PF00106 short chain dehydrogenase 14 208 9.8E-55 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17030 480287a3a46ed59dc8539a2a65603584 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 9.5E-138 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM460_RS17030 480287a3a46ed59dc8539a2a65603584 309 Gene3D G3DSA:3.30.54.10 268 308 8.6E-10 T 29-03-2018 AM460_RS17030 480287a3a46ed59dc8539a2a65603584 309 Gene3D G3DSA:3.30.54.10 187 246 3.1E-31 T 29-03-2018 AM460_RS17030 480287a3a46ed59dc8539a2a65603584 309 SUPERFAMILY SSF56596 5 308 1.83E-127 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM460_RS17030 480287a3a46ed59dc8539a2a65603584 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 1.3E-164 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM460_RS17030 480287a3a46ed59dc8539a2a65603584 309 Gene3D G3DSA:3.50.14.10 7 186 1.1E-58 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM460_RS17030 480287a3a46ed59dc8539a2a65603584 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 73.887 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM460_RS15070 da092854e06ff8159d9667c957de75b0 266 Gene3D G3DSA:3.40.190.10 157 265 4.4E-17 T 29-03-2018 AM460_RS15070 da092854e06ff8159d9667c957de75b0 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM460_RS15070 da092854e06ff8159d9667c957de75b0 266 SMART SM00079 42 262 4.4E-5 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM460_RS15070 da092854e06ff8159d9667c957de75b0 266 Gene3D G3DSA:3.40.190.10 9 156 1.3E-46 T 29-03-2018 AM460_RS15070 da092854e06ff8159d9667c957de75b0 266 SMART SM00062 42 263 5.1E-88 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS15070 da092854e06ff8159d9667c957de75b0 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 1.8E-71 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS15070 da092854e06ff8159d9667c957de75b0 266 SUPERFAMILY SSF53850 15 264 1.16E-76 T 29-03-2018 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 Gene3D G3DSA:3.40.50.720 174 280 4.3E-24 T 29-03-2018 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 SMART SM00829 7 289 1.6E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 SUPERFAMILY SSF50129 4 171 2.13E-49 T 29-03-2018 IPR011032 GroES-like AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 142 1.6E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 3.6E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 Gene3D G3DSA:3.90.180.10 1 173 1.5E-47 T 29-03-2018 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 Gene3D G3DSA:3.40.50.20 281 341 3.0E-6 T 29-03-2018 AM460_RS24685 74f15d109a5ae805300049fa7123f919 349 SUPERFAMILY SSF51735 151 312 7.99E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 SUPERFAMILY SSF116726 291 374 2.09E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF02080 TrkA-C domain 229 281 1.4E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF02080 TrkA-C domain 304 371 5.9E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 SUPERFAMILY SSF116726 227 282 1.7E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.611 T 29-03-2018 IPR023017 Transport protein YbjL, putative AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF06826 Predicted Permease Membrane Region 17 182 2.0E-40 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF06826 Predicted Permease Membrane Region 385 555 6.3E-43 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Gene3D G3DSA:3.30.70.1450 295 375 2.7E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 4.7E-38 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 4.6E-44 T 29-03-2018 IPR006512 YidE/YbjL duplication AM460_RS22070 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Gene3D G3DSA:3.30.70.1450 216 291 7.6E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.40.50.720 1 159 1.9E-78 T 29-03-2018 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF51735 3 166 1.04E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16100 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.30.360.10 160 314 4.7E-83 T 29-03-2018 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.6E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.6E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.6E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.6E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.6E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.8E-134 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 5.3E-72 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF55347 149 312 2.43E-82 T 29-03-2018 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.0E-41 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 SMART SM00846 3 150 4.8E-95 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16100 adec9c8c296a076912033969d932bc85 331 PIRSF PIRSF000149 1 331 2.9E-137 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 Gene3D G3DSA:3.30.1360.60 399 474 6.1E-28 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 2.6E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.2E-235 T 29-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 SUPERFAMILY SSF55604 401 474 6.67E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 2.1E-90 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 4.4E-85 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS20060 f5039fc7e76cc9d0b9b3ad7ce975e8c7 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 8.0E-14 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS04050 38795d3facf63047ab028f62d0851ef1 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 3.6E-61 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AM460_RS04050 38795d3facf63047ab028f62d0851ef1 206 PIRSF PIRSF006324 1 205 4.1E-55 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS04050 38795d3facf63047ab028f62d0851ef1 206 Pfam PF01810 LysE type translocator 14 202 7.3E-51 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS10325 f2603744fde33f57a35b72612c21b015 450 SUPERFAMILY SSF103473 13 444 1.96E-81 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10325 f2603744fde33f57a35b72612c21b015 450 PIRSF PIRSF002808 2 448 4.4E-44 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS10325 f2603744fde33f57a35b72612c21b015 450 Gene3D G3DSA:1.20.1250.20 238 445 1.1E-25 T 29-03-2018 AM460_RS10325 f2603744fde33f57a35b72612c21b015 450 Gene3D G3DSA:1.20.1250.20 12 217 1.2E-36 T 29-03-2018 AM460_RS10325 f2603744fde33f57a35b72612c21b015 450 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 2.4E-162 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS10325 f2603744fde33f57a35b72612c21b015 450 Pfam PF07690 Major Facilitator Superfamily 25 318 1.4E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS24025 71f386f6b714a6f79a6c94895f3dc8d4 175 Pfam PF07445 Primosomal replication protein priC 9 173 1.2E-45 T 29-03-2018 IPR010890 Primosomal replication PriB/PriC AM460_RS24025 71f386f6b714a6f79a6c94895f3dc8d4 175 Gene3D G3DSA:1.20.120.330 6 175 1.6E-4 T 29-03-2018 AM460_RS21295 23638f4dd825a9b0957e2c95c3d262a9 387 SUPERFAMILY SSF69279 15 186 4.59E-27 T 29-03-2018 AM460_RS21295 23638f4dd825a9b0957e2c95c3d262a9 387 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 6.6E-48 T 29-03-2018 AM460_RS21295 23638f4dd825a9b0957e2c95c3d262a9 387 Gene3D G3DSA:3.55.50.10 113 224 7.4E-7 T 29-03-2018 AM460_RS21745 7e4c88c5a29ddf8efb9e33911df656e5 661 Gene3D G3DSA:2.10.280.10 196 240 0.019 T 29-03-2018 AM460_RS21745 7e4c88c5a29ddf8efb9e33911df656e5 661 Gene3D G3DSA:2.10.280.10 241 285 0.011 T 29-03-2018 AM460_RS21745 7e4c88c5a29ddf8efb9e33911df656e5 661 Pfam PF03406 Phage tail fibre repeat 217 257 5.4E-20 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS21745 7e4c88c5a29ddf8efb9e33911df656e5 661 Pfam PF03406 Phage tail fibre repeat 173 213 9.7E-20 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS21745 7e4c88c5a29ddf8efb9e33911df656e5 661 Pfam PF03406 Phage tail fibre repeat 261 300 9.2E-18 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM460_RS21745 7e4c88c5a29ddf8efb9e33911df656e5 661 Pfam PF12571 Phage tail-collar fibre protein 6 153 3.8E-53 T 29-03-2018 IPR022225 Phage tail fibre protein AM460_RS06485 aa3f2ac06eaf2f168b545c1a7b48e6e0 428 Gene3D G3DSA:3.30.70.1070 347 411 4.0E-4 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS06485 aa3f2ac06eaf2f168b545c1a7b48e6e0 428 SUPERFAMILY SSF110997 344 408 4.45E-7 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS06485 aa3f2ac06eaf2f168b545c1a7b48e6e0 428 Hamap MF_02021 Cell division protein DamX [damX]. 1 428 25.191 T 29-03-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 AM460_RS06485 aa3f2ac06eaf2f168b545c1a7b48e6e0 428 Pfam PF05036 Sporulation related domain 345 417 1.3E-12 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 Pfam PF17151 Periplasmic sensor domain 41 227 2.9E-86 T 29-03-2018 IPR033416 Periplasmic sensor domain CHASE7 AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 SUPERFAMILY SSF55073 403 560 5.81E-44 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 Gene3D G3DSA:3.30.70.270 390 562 2.0E-51 T 29-03-2018 AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 Gene3D G3DSA:3.30.450.20 247 350 5.1E-5 T 29-03-2018 AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 SMART SM00267 387 561 5.7E-66 T 29-03-2018 IPR000160 GGDEF domain AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 561 9.8E-64 T 29-03-2018 IPR000160 GGDEF domain AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 Gene3D G3DSA:3.30.450.20 48 246 6.0E-4 T 29-03-2018 AM460_RS14865 b715c563ffef20d362547c11a6a359f8 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 557 6.3E-47 T 29-03-2018 IPR000160 GGDEF domain AM460_RS11405 471cb7c8f5b737badaa0c459d8e92d62 245 SUPERFAMILY SSF48452 27 121 2.34E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11405 471cb7c8f5b737badaa0c459d8e92d62 245 Pfam PF13525 Outer membrane lipoprotein 28 236 1.0E-85 T 29-03-2018 AM460_RS11405 471cb7c8f5b737badaa0c459d8e92d62 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 243 2.0E-88 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD AM460_RS11405 471cb7c8f5b737badaa0c459d8e92d62 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 39.419 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD AM460_RS11405 471cb7c8f5b737badaa0c459d8e92d62 245 Gene3D G3DSA:1.25.20.10 30 243 3.8E-15 T 29-03-2018 AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 SUPERFAMILY SSF55874 336 476 7.07E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.2E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.2E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 Gene3D G3DSA:3.30.565.10 335 486 2.2E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 SUPERFAMILY SSF47384 250 319 5.3E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 466 3.8E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 Pfam PF08918 PhoQ Sensor 10 188 1.1E-85 T 29-03-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 AM460_RS19910 22e04226a9dc62b86f8c48c9d68a8e9c 486 SMART SM00387 374 480 6.2E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 Pfam PF00012 Hsp70 protein 3 228 5.0E-15 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 Pfam PF00012 Hsp70 protein 330 422 3.7E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 Gene3D G3DSA:3.30.420.40 217 429 1.9E-29 T 29-03-2018 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 SUPERFAMILY SSF53067 85 205 3.04E-27 T 29-03-2018 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 SUPERFAMILY SSF53067 2 44 3.04E-27 T 29-03-2018 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 SUPERFAMILY SSF53067 208 276 3.41E-30 T 29-03-2018 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 SUPERFAMILY SSF53067 328 447 3.41E-30 T 29-03-2018 AM460_RS14020 f9d3e1a8dc07012af53e5a3ab2499f59 450 Gene3D G3DSA:3.30.420.40 1 216 2.1E-34 T 29-03-2018 AM460_RS12480 c0e8f1b30c4b048b76754a2a94f61237 381 Gene3D G3DSA:3.40.50.10540 4 381 5.5E-125 T 29-03-2018 IPR023606 CoA-transferase family III domain AM460_RS12480 c0e8f1b30c4b048b76754a2a94f61237 381 Pfam PF02515 CoA-transferase family III 11 363 1.0E-113 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM460_RS12480 c0e8f1b30c4b048b76754a2a94f61237 381 SUPERFAMILY SSF89796 8 378 7.19E-122 T 29-03-2018 IPR023606 CoA-transferase family III domain AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SUPERFAMILY SSF54991 696 794 5.23E-31 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Pfam PF03483 B3/4 domain 212 385 5.1E-72 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Gene3D G3DSA:3.30.56.10 402 475 1.7E-26 T 29-03-2018 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SMART SM00873 212 385 2.7E-101 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 2.8E-22 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SUPERFAMILY SSF56037 197 393 2.01E-78 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Gene3D G3DSA:3.30.56.10 141 184 1.4E-8 T 29-03-2018 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Gene3D G3DSA:3.30.56.10 1 53 5.8E-12 T 29-03-2018 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 50.25 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SUPERFAMILY SSF50249 35 197 5.88E-52 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SUPERFAMILY SSF46955 403 475 2.93E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Gene3D G3DSA:3.50.40.10 195 395 3.9E-75 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.5E-28 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SUPERFAMILY SSF55681 467 690 2.48E-55 T 29-03-2018 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SMART SM00874 403 471 1.2E-31 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 3.9E-304 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Gene3D G3DSA:3.30.70.380 698 794 1.3E-23 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Gene3D G3DSA:3.30.930.10 490 690 7.0E-38 T 29-03-2018 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 SMART SM00896 701 794 9.7E-46 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.1E-27 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM460_RS16460 5a918eb1e9ad023a1c9281acae7664b9 795 Gene3D G3DSA:2.40.50.140 54 140 1.7E-44 T 29-03-2018 AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 746 3.3E-172 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 Pfam PF00593 TonB dependent receptor 276 743 2.6E-57 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 Gene3D G3DSA:2.40.170.20 177 746 3.0E-88 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 Gene3D G3DSA:2.170.130.10 42 176 4.7E-35 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 163 9.5E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS23485 50c112c1b7320f50e02fe96669799394 746 SUPERFAMILY SSF56935 34 746 1.05E-139 T 29-03-2018 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 SUPERFAMILY SSF47413 7 64 4.79E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 8 333 1.7E-139 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 Pfam PF13377 Periplasmic binding protein-like domain 185 333 4.1E-11 T 29-03-2018 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 4.3E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 Gene3D G3DSA:1.10.260.40 7 63 3.8E-22 T 29-03-2018 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 SUPERFAMILY SSF53822 66 330 1.22E-46 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 SMART SM00354 6 79 1.9E-37 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 29-03-2018 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 Gene3D G3DSA:3.40.50.2300 173 334 9.1E-25 T 29-03-2018 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 4.5E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 4.5E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS10385 5d3acf87c61ba04ecb6db74f7ae9d215 335 Gene3D G3DSA:3.40.50.2300 64 172 1.4E-23 T 29-03-2018 AM460_RS14740 e9afc6528489177f5b1296eeded8dfe9 434 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 5.6E-206 T 29-03-2018 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS14740 e9afc6528489177f5b1296eeded8dfe9 434 Pfam PF00425 chorismate binding enzyme 173 424 7.1E-70 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM460_RS14740 e9afc6528489177f5b1296eeded8dfe9 434 SUPERFAMILY SSF56322 10 432 5.1E-96 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS14740 e9afc6528489177f5b1296eeded8dfe9 434 Gene3D G3DSA:3.60.120.10 7 433 1.1E-85 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS18690 da80bdf28fa068a60df5b7909d6c750c 256 Gene3D G3DSA:1.10.10.10 1 64 3.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18690 da80bdf28fa068a60df5b7909d6c750c 256 Gene3D G3DSA:1.10.10.10 73 140 3.8E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18690 da80bdf28fa068a60df5b7909d6c750c 256 Pfam PF07789 Protein of unknown function (DUF1627) 91 245 2.2E-90 T 29-03-2018 IPR012432 Protein of unknown function DUF1627 AM460_RS08945 6941e90a842d5b46b537c69062318e76 127 Pfam PF11682 Probable zinc-ribbon 4 121 1.9E-21 T 29-03-2018 IPR021696 Protein of unknown function DUF3279 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 SUPERFAMILY SSF53671 4 306 7.73E-101 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.022 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 4.3E-29 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.5E-126 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.3E-47 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 1 146 2.6E-52 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS01470 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 147 292 6.2E-49 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM460_RS04170 001a19d0ec0bd5022487526adf036a3d 399 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 35 363 3.1E-135 T 29-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AM460_RS04170 001a19d0ec0bd5022487526adf036a3d 399 Gene3D G3DSA:3.90.20.10 32 132 7.9E-4 T 29-03-2018 AM460_RS00365 447c9f5097a01be230f0d785fc66844a 180 Pfam PF11985 Protein of unknown function (DUF3486) 1 177 1.8E-49 T 29-03-2018 IPR021874 Bacteriophage Mu, Gp27 AM460_RS05770 df9b74708cc1a3803391984b0597a232 175 Gene3D G3DSA:1.10.10.10 43 173 8.1E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05770 df9b74708cc1a3803391984b0597a232 175 SUPERFAMILY SSF46894 111 169 1.33E-7 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS05770 df9b74708cc1a3803391984b0597a232 175 Pfam PF00196 Bacterial regulatory proteins, luxR family 117 167 8.4E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS10680 49f02930ef1ffc948cd4fdaa55920f18 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 1.3E-55 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH AM460_RS10680 49f02930ef1ffc948cd4fdaa55920f18 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 1.0E-75 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 SMART SM00936 285 376 4.4E-35 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 SUPERFAMILY SSF56601 14 285 7.11E-83 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.4E-18 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.4E-18 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.4E-18 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 Gene3D G3DSA:2.60.410.10 303 376 4.2E-19 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 266 3.6E-102 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 6.3E-24 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 Gene3D G3DSA:3.40.710.10 22 302 1.2E-52 T 29-03-2018 AM460_RS22110 50c91c3211a73b8d0d0e90c0305087d7 400 SUPERFAMILY SSF69189 285 378 3.73E-25 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 PIRSF PIRSF036388 1 427 5.3E-238 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 SUPERFAMILY SSF53187 108 426 2.32E-103 T 29-03-2018 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.592 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 7.7E-104 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 Gene3D G3DSA:3.40.630.10 93 427 2.9E-112 T 29-03-2018 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 Pfam PF12404 Peptidase 5 81 8.0E-33 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS11780 59454f774c276f6fa6ef8cdefb71cdcf 427 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM460_RS06535 25fdbfc34ee9654d792218ebb6f1216d 292 PIRSF PIRSF016839 1 292 5.9E-132 T 29-03-2018 AM460_RS06535 25fdbfc34ee9654d792218ebb6f1216d 292 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 7 15 - T 29-03-2018 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 AM460_RS06535 25fdbfc34ee9654d792218ebb6f1216d 292 Pfam PF02126 Phosphotriesterase family 1 292 1.2E-140 T 29-03-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 AM460_RS06535 25fdbfc34ee9654d792218ebb6f1216d 292 Gene3D G3DSA:3.20.20.140 2 292 5.1E-55 T 29-03-2018 AM460_RS06535 25fdbfc34ee9654d792218ebb6f1216d 292 SUPERFAMILY SSF51556 3 291 1.02E-97 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 SUPERFAMILY SSF52540 248 524 1.68E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 Pfam PF11867 Domain of unknown function (DUF3387) 749 1080 1.2E-92 T 29-03-2018 IPR021810 Protein of unknown function DUF3387 AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 Pfam PF04851 Type III restriction enzyme, res subunit 294 478 3.1E-13 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 SMART SM00487 289 505 1.6E-9 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 140 745 3.3E-136 T 29-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 236 8.6E-51 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 SUPERFAMILY SSF52540 646 738 7.01E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 SUPERFAMILY SSF52540 318 373 7.01E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 Gene3D G3DSA:3.40.50.300 545 766 7.3E-7 T 29-03-2018 AM460_RS00690 a7ff9835957b924ebfaccf80f75c4bcc 1087 Gene3D G3DSA:3.40.50.300 3 502 4.4E-18 T 29-03-2018 AM460_RS13005 15e498f86a52a506219b8a983a4b7d2b 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 250 3.1E-81 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM460_RS13005 15e498f86a52a506219b8a983a4b7d2b 252 Pfam PF12697 Alpha/beta hydrolase family 17 244 1.1E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS13005 15e498f86a52a506219b8a983a4b7d2b 252 Gene3D G3DSA:3.40.50.1820 1 252 1.1E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS13005 15e498f86a52a506219b8a983a4b7d2b 252 SUPERFAMILY SSF53474 9 250 1.92E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS13005 15e498f86a52a506219b8a983a4b7d2b 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 4 251 33.287 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM460_RS17880 ac20627ffce06badb8f812b8c70cabfc 101 SUPERFAMILY SSF81345 4 81 3.4E-7 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS17880 ac20627ffce06badb8f812b8c70cabfc 101 Pfam PF00950 ABC 3 transport family 1 73 2.7E-19 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM460_RS17880 ac20627ffce06badb8f812b8c70cabfc 101 Gene3D G3DSA:1.10.3470.10 1 85 1.1E-4 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS25070 13119f177bb40251c69d693b6a942708 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 259 36.339 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 29-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 Pfam PF00696 Amino acid kinase family 6 234 1.8E-44 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS25070 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF88697 276 365 1.1E-23 T 29-03-2018 IPR015947 PUA-like domain AM460_RS25070 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:2.30.130.10 274 366 9.3E-30 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 SMART SM00359 276 359 7.2E-23 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF53633 6 256 1.13E-65 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS25070 13119f177bb40251c69d693b6a942708 367 Pfam PF01472 PUA domain 276 350 1.4E-22 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 PIRSF PIRSF000729 1 367 9.8E-148 T 29-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 5.4E-157 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 2.9E-57 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 2.9E-57 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 2.9E-57 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 2.9E-57 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 2.9E-57 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM460_RS25070 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:3.40.1160.10 1 265 1.3E-63 T 29-03-2018 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 SUPERFAMILY SSF51735 5 278 1.89E-95 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 SUPERFAMILY SSF48179 280 483 2.58E-67 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 Gene3D G3DSA:3.40.50.720 2 278 1.6E-103 T 29-03-2018 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 1.5E-51 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 213 459 7.8E-104 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 1.6E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 1.6E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 1.6E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 1.6E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 Gene3D G3DSA:1.10.1040.10 279 486 4.6E-72 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS17215 dc3b5b9499a41c39c12d8f83777bff8f 486 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 SUPERFAMILY SSF56327 172 449 5.18E-74 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 Gene3D G3DSA:3.90.1820.10 2 313 1.7E-69 T 29-03-2018 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 Gene3D G3DSA:3.90.1820.10 314 451 3.8E-39 T 29-03-2018 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.4E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 6.4E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 6.4E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 6.4E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 6.4E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.4E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 6.4E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 2.1E-81 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 421 1.3E-62 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM460_RS02220 041a771bc196626c13371ea0d1fb0f90 451 SUPERFAMILY SSF51735 5 171 2.63E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS01755 e165a61251221ef14a2478c71b65cb0d 284 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 3.0E-33 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS01755 e165a61251221ef14a2478c71b65cb0d 284 Hamap MF_01951 L-ribulose-5-phosphate 3-epimerase UlaE [ulaE]. 1 284 82.033 T 29-03-2018 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae GO:0034015 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AM460_RS01755 e165a61251221ef14a2478c71b65cb0d 284 SUPERFAMILY SSF51658 21 271 4.06E-55 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS01755 e165a61251221ef14a2478c71b65cb0d 284 Gene3D G3DSA:3.20.20.150 1 284 7.5E-60 T 29-03-2018 AM460_RS01755 e165a61251221ef14a2478c71b65cb0d 284 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 281 1.6E-155 T 29-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Gene3D G3DSA:3.30.1490.100 243 351 3.2E-29 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 SUPERFAMILY SSF100879 241 349 6.28E-27 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Pfam PF00817 impB/mucB/samB family 7 154 4.9E-49 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Gene3D G3DSA:3.30.70.270 41 116 7.9E-26 T 29-03-2018 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Gene3D G3DSA:3.30.70.270 117 170 4.7E-22 T 29-03-2018 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Gene3D G3DSA:1.10.150.20 171 242 1.1E-22 T 29-03-2018 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Pfam PF11798 IMS family HHH motif 166 197 5.5E-8 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.24 T 29-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 345 6.6E-10 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS25115 c6d33b4f43136d202b3760000af254c4 351 SUPERFAMILY SSF56672 1 234 1.78E-94 T 29-03-2018 AM460_RS09935 0b48a9e1f99ef82a0bed4c2f17b46097 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 3.3E-24 T 29-03-2018 IPR010305 Protein of unknown function DUF903 AM460_RS09935 0b48a9e1f99ef82a0bed4c2f17b46097 72 Gene3D G3DSA:2.30.30.100 21 71 2.2E-26 T 29-03-2018 AM460_RS09935 0b48a9e1f99ef82a0bed4c2f17b46097 72 SUPERFAMILY SSF50182 21 71 3.11E-18 T 29-03-2018 IPR010920 LSM domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.366.10 734 854 5.5E-23 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF52777 1911 2109 1.89E-23 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF00668 Condensation domain 1948 2262 6.3E-33 T 29-03-2018 IPR001242 Condensation domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.50.150 1019 1259 1.7E-25 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.50.150 2444 2761 8.5E-22 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1848 1863 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:1.10.1200.10 1814 1902 7.6E-11 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.50.1820 2903 3157 4.2E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF53335 2575 2750 4.8E-23 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF53335 1060 1250 1.36E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF51735 1557 1786 2.7E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF52151 550 677 2.04E-60 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF52151 738 835 2.04E-60 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.30.70.250 682 733 5.8E-13 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 1.5E-78 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF53474 2898 3152 3.6E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF00975 Thioesterase domain 2915 3006 2.9E-20 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF47336 1817 1928 7.85E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.30.559.10 1903 2102 8.0E-22 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.47.10 19 288 3.5E-67 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF55048 675 736 1.44E-6 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SMART SM00823 Phosphopantetheine attachment site 2830 2898 0.0025 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SMART SM00823 Phosphopantetheine attachment site 1821 1893 8.8E-4 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 515 1.4E-13 T 29-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF08659 KR domain 1560 1729 4.7E-37 T 29-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 2.2E-74 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:1.10.1200.10 2827 2902 7.4E-17 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF00698 Acyl transferase domain 551 846 1.9E-52 T 29-03-2018 IPR014043 Acyl transferase AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF52777 2098 2343 1.03E-43 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.50.720 1554 1798 1.7E-32 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF08242 Methyltransferase domain 1093 1194 1.2E-20 T 29-03-2018 IPR013217 Methyltransferase type 12 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF08242 Methyltransferase domain 2593 2693 1.7E-16 T 29-03-2018 IPR013217 Methyltransferase type 12 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.47.10 291 450 2.7E-55 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF00550 Phosphopantetheine attachment site 2832 2894 3.8E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF00550 Phosphopantetheine attachment site 1823 1889 4.1E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1558 1731 5.1E-26 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.1E-39 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SMART SM00825 Beta-ketoacyl synthase 29 452 1.8E-182 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF53901 427 447 1.12E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF53901 23 143 1.12E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF53901 172 397 1.12E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2853 2868 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SMART SM00824 Thioesterase 2918 3152 7.6E-4 T 29-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 Gene3D G3DSA:3.40.366.10 550 681 1.7E-34 T 29-03-2018 AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF47336 2828 2894 1.44E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS14710 90a924125c3a7a632ab1bb3bcd33d9a0 3163 SUPERFAMILY SSF51735 1366 1540 7.09E-11 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 5.0E-281 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 6.9E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 6.9E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 6.9E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 6.9E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 Gene3D G3DSA:3.60.120.10 1 520 2.6E-157 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 Pfam PF00425 chorismate binding enzyme 242 502 3.4E-82 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 SUPERFAMILY SSF56322 7 516 1.44E-164 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 PIRSF PIRSF001373 1 520 3.0E-250 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS18355 d0481d5235ac54334c2416f4ee71c4df 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 5.5E-13 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 Pfam PF12796 Ankyrin repeats (3 copies) 78 174 1.4E-9 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 Gene3D G3DSA:1.25.40.20 89 201 1.9E-27 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 Gene3D G3DSA:1.25.40.20 10 88 8.3E-18 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 SMART SM00248 176 201 540.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 SMART SM00248 138 172 9.4 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 SMART SM00248 107 134 1600.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 SMART SM00248 71 100 150.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 SMART SM00248 5 34 2200.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 SMART SM00248 38 67 0.0017 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 SUPERFAMILY SSF48403 11 201 9.61E-45 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM460_RS24715 957e9893ba4345bb118d366fe5e666eb 201 Pfam PF13637 Ankyrin repeats (many copies) 13 59 1.6E-7 T 29-03-2018 AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 0.0017 T 29-03-2018 AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 3.6E-51 T 29-03-2018 AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 Gene3D G3DSA:3.40.50.720 2 38 2.8E-6 T 29-03-2018 AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 Gene3D G3DSA:3.40.50.720 39 237 6.9E-50 T 29-03-2018 AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS01450 5cdac4ea9b4fded1564f9e771b446e4a 237 SUPERFAMILY SSF51735 6 234 2.06E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS13960 333881755834af746a09dcb8f81fd6b2 110 SUPERFAMILY SSF160113 1 57 9.94E-20 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM460_RS13960 333881755834af746a09dcb8f81fd6b2 110 SUPERFAMILY SSF160113 61 108 3.53E-16 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM460_RS13960 333881755834af746a09dcb8f81fd6b2 110 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 5.1E-22 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM460_RS13960 333881755834af746a09dcb8f81fd6b2 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 3.7E-21 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM460_RS13960 333881755834af746a09dcb8f81fd6b2 110 Gene3D G3DSA:3.30.160.160 54 99 1.2E-14 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM460_RS13960 333881755834af746a09dcb8f81fd6b2 110 Gene3D G3DSA:3.30.160.160 4 48 6.0E-17 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM460_RS05960 2ca8fc282ef46551ff8732e228c447bc 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 7 276 1.3E-77 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS05960 2ca8fc282ef46551ff8732e228c447bc 283 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 274 7.2E-66 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS05960 2ca8fc282ef46551ff8732e228c447bc 283 SUPERFAMILY SSF51569 1 276 2.49E-76 T 29-03-2018 AM460_RS05960 2ca8fc282ef46551ff8732e228c447bc 283 PIRSF PIRSF001359 1 280 2.0E-73 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS05960 2ca8fc282ef46551ff8732e228c447bc 283 Gene3D G3DSA:3.20.20.70 1 281 1.7E-80 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS05960 2ca8fc282ef46551ff8732e228c447bc 283 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS17090 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 SUPERFAMILY SSF103481 8 107 8.37E-17 T 29-03-2018 AM460_RS17090 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.1E-26 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM460_RS17090 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 2 121 29.763 T 29-03-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 AM460_RS06590 502a128493993757be1b0c8f4431232e 55 ProDom PD026929 YHFG 1 55 2.0E-14 T 29-03-2018 IPR022541 Protein of unknown function DUF2559 AM460_RS06590 502a128493993757be1b0c8f4431232e 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 4.0E-31 T 29-03-2018 IPR022541 Protein of unknown function DUF2559 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 133 155 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 76 94 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 184 200 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 53 75 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 156 183 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 201 226 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 5 24 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 115 132 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 PRINTS PR01003 Flagellar assembly protein FliH signature 95 114 6.5E-120 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM460_RS14940 66f7a59423bb6d45cee67e84b1af7253 228 Pfam PF02108 Flagellar assembly protein FliH 96 219 1.3E-40 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 29-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.6E-46 T 29-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.1E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.1E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.1E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 Pfam PF00203 Ribosomal protein S19 3 83 8.5E-36 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 Gene3D G3DSA:3.30.860.10 1 92 1.9E-40 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.549 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 PIRSF PIRSF002144 1 92 2.1E-31 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06840 75dc389130382ce3a8c6078ff4f868d1 92 SUPERFAMILY SSF54570 3 84 2.75E-35 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 SMART SM00382 142 327 4.5E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF52540 77 348 1.44E-90 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:1.10.1140.10 348 458 6.4E-46 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:2.40.10.170 1 75 2.6E-30 T 29-03-2018 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.065 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF50615 3 75 1.99E-24 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:3.40.50.300 76 347 1.8E-91 T 29-03-2018 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 4.1E-64 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF47917 345 459 2.07E-55 T 29-03-2018 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.4E-20 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 2.3E-264 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM460_RS04530 87a0407f808f3b21b2ac263219666221 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS20025 6d811a959a23ed1a3377425992e348e2 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 56.44 T 29-03-2018 IPR022987 Uncharacterised protein family UPF0227 AM460_RS20025 6d811a959a23ed1a3377425992e348e2 180 SUPERFAMILY SSF53474 2 176 4.47E-8 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS20025 6d811a959a23ed1a3377425992e348e2 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 7.0E-72 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM460_RS23200 9619fb5669adb8b1a2ab49236511e1c7 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 6.8E-46 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM460_RS23200 9619fb5669adb8b1a2ab49236511e1c7 633 SUPERFAMILY SSF56601 254 611 2.47E-91 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS23200 9619fb5669adb8b1a2ab49236511e1c7 633 SUPERFAMILY SSF56519 56 253 1.31E-53 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM460_RS23200 9619fb5669adb8b1a2ab49236511e1c7 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 6.8E-240 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 AM460_RS23200 9619fb5669adb8b1a2ab49236511e1c7 633 Gene3D G3DSA:3.90.1310.10 33 249 4.0E-54 T 29-03-2018 AM460_RS23200 9619fb5669adb8b1a2ab49236511e1c7 633 Gene3D G3DSA:3.40.710.10 250 617 1.0E-81 T 29-03-2018 AM460_RS23200 9619fb5669adb8b1a2ab49236511e1c7 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 2.0E-90 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM460_RS13095 85ff66571eadc26be241e8d4be518165 429 Pfam PF07690 Major Facilitator Superfamily 23 381 1.9E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS13095 85ff66571eadc26be241e8d4be518165 429 Gene3D G3DSA:1.20.1250.20 226 425 2.4E-19 T 29-03-2018 AM460_RS13095 85ff66571eadc26be241e8d4be518165 429 Gene3D G3DSA:1.20.1250.20 5 214 2.7E-35 T 29-03-2018 AM460_RS13095 85ff66571eadc26be241e8d4be518165 429 SUPERFAMILY SSF103473 9 417 8.5E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10515 2093671f94f6223b67ac99e85dc7abe3 103 Pfam PF04977 Septum formation initiator 11 89 2.4E-30 T 29-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AM460_RS10515 2093671f94f6223b67ac99e85dc7abe3 103 Gene3D G3DSA:1.20.5.1000 27 77 2.8E-5 T 29-03-2018 AM460_RS10515 2093671f94f6223b67ac99e85dc7abe3 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.886 T 29-03-2018 IPR023081 Cell division protein FtsB AM460_RS08165 b9f58c8e73f48c10bddd1dac4690d710 201 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 2.1E-77 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS08165 b9f58c8e73f48c10bddd1dac4690d710 201 Gene3D G3DSA:3.20.130.10 1 176 1.2E-61 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS08165 b9f58c8e73f48c10bddd1dac4690d710 201 SUPERFAMILY SSF117457 3 174 1.57E-57 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS08165 b9f58c8e73f48c10bddd1dac4690d710 201 Pfam PF05683 Fumarase C-terminus 9 175 6.4E-40 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM460_RS21250 eb80967c8454db599af2253dc2dba93d 174 Pfam PF07484 Phage Tail Collar Domain 14 61 3.6E-15 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS21250 eb80967c8454db599af2253dc2dba93d 174 Gene3D G3DSA:3.90.1340.10 4 56 7.5E-21 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS21250 eb80967c8454db599af2253dc2dba93d 174 Gene3D G3DSA:4.10.1070.10 57 166 9.3E-18 T 29-03-2018 AM460_RS21250 eb80967c8454db599af2253dc2dba93d 174 SUPERFAMILY SSF88874 2 173 3.92E-37 T 29-03-2018 AM460_RS00230 eb80967c8454db599af2253dc2dba93d 174 Pfam PF07484 Phage Tail Collar Domain 14 61 3.6E-15 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS00230 eb80967c8454db599af2253dc2dba93d 174 Gene3D G3DSA:3.90.1340.10 4 56 7.5E-21 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS00230 eb80967c8454db599af2253dc2dba93d 174 Gene3D G3DSA:4.10.1070.10 57 166 9.3E-18 T 29-03-2018 AM460_RS00230 eb80967c8454db599af2253dc2dba93d 174 SUPERFAMILY SSF88874 2 173 3.92E-37 T 29-03-2018 AM460_RS23505 3a3829c9695067eb804686b1e9c56cdc 316 Gene3D G3DSA:1.10.10.60 1 54 2.7E-14 T 29-03-2018 AM460_RS23505 3a3829c9695067eb804686b1e9c56cdc 316 Gene3D G3DSA:3.40.50.1360 60 314 2.8E-39 T 29-03-2018 AM460_RS23505 3a3829c9695067eb804686b1e9c56cdc 316 SUPERFAMILY SSF100950 63 313 2.33E-67 T 29-03-2018 AM460_RS23505 3a3829c9695067eb804686b1e9c56cdc 316 Pfam PF04198 Putative sugar-binding domain 63 314 5.9E-63 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 238 1.9E-115 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 SMART SM00382 54 181 1.3E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 4.7E-33 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 3.8E-147 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 SUPERFAMILY SSF46785 260 333 3.59E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 SUPERFAMILY SSF52540 23 255 1.06E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 Gene3D G3DSA:3.40.50.300 21 184 1.2E-27 T 29-03-2018 AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 Gene3D G3DSA:1.10.8.60 187 257 1.9E-31 T 29-03-2018 AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 Gene3D G3DSA:1.10.10.10 260 330 7.2E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.618 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM460_RS15675 84acb705e666a169cc4057f1b1503c9e 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 1.0E-40 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM460_RS01515 d62d530fdb9b97df87780adf6391db49 154 Gene3D G3DSA:3.20.20.70 12 129 9.9E-11 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS01515 d62d530fdb9b97df87780adf6391db49 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.4E-52 T 29-03-2018 AM460_RS01515 d62d530fdb9b97df87780adf6391db49 154 SUPERFAMILY SSF102114 24 105 5.1E-7 T 29-03-2018 AM460_RS01515 d62d530fdb9b97df87780adf6391db49 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.9E-66 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM460_RS01515 d62d530fdb9b97df87780adf6391db49 154 PIRSF PIRSF000368 1 154 3.4E-61 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM460_RS01515 d62d530fdb9b97df87780adf6391db49 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM460_RS13875 98a38068fa01fc5848821c44f9844349 272 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 71 109 - T 29-03-2018 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 AM460_RS13875 98a38068fa01fc5848821c44f9844349 272 Gene3D G3DSA:3.20.20.80 54 268 4.3E-64 T 29-03-2018 AM460_RS13875 98a38068fa01fc5848821c44f9844349 272 SUPERFAMILY SSF51445 64 267 1.01E-53 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS13875 98a38068fa01fc5848821c44f9844349 272 SMART SM00641 67 178 2.2E-45 T 29-03-2018 IPR018077 Glycoside hydrolase, family 25 subgroup AM460_RS13875 98a38068fa01fc5848821c44f9844349 272 Pfam PF01183 Glycosyl hydrolases family 25 70 245 1.1E-54 T 29-03-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AM460_RS19940 2da4f50be2cee1134a6ff6ffaa0c724f 264 SUPERFAMILY SSF161098 3 254 5.98E-56 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS19940 2da4f50be2cee1134a6ff6ffaa0c724f 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 6.2E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS19940 2da4f50be2cee1134a6ff6ffaa0c724f 264 Gene3D G3DSA:1.10.3720.10 5 259 6.1E-40 T 29-03-2018 AM460_RS20475 402dc5e3d8d6f3c10334e841580979a9 502 Pfam PF00474 Sodium:solute symporter family 35 437 1.8E-147 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS20475 402dc5e3d8d6f3c10334e841580979a9 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS20475 402dc5e3d8d6f3c10334e841580979a9 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 1.6E-132 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS20475 402dc5e3d8d6f3c10334e841580979a9 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS20475 402dc5e3d8d6f3c10334e841580979a9 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 7.5E-234 T 29-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 106 6.6E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 329 8.8E-43 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.10 201 230 6.6E-18 T 29-03-2018 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.10 231 243 0.021 T 29-03-2018 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 SMART SM00382 49 332 1.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 8.9E-239 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.60 335 431 2.6E-29 T 29-03-2018 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 2.2E-5 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:3.40.50.300 5 122 2.7E-5 T 29-03-2018 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 SUPERFAMILY SSF52540 3 441 5.13E-95 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.818 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.10 123 200 4.0E-30 T 29-03-2018 AM460_RS03420 31936f801679313e38a4900fbcf62ec5 443 SMART SM01086 335 434 3.3E-22 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 251 1.7E-75 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 267 4.8E-106 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 PIRSF PIRSF000398 1 272 4.3E-68 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:3.40.50.150 154 269 8.1E-17 T 29-03-2018 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:1.10.1020.10 57 153 9.5E-34 T 29-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AM460_RS06490 847c46aedb463dd8c17909b174c161cf 278 SUPERFAMILY SSF53335 5 267 5.15E-78 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS03510 79eddf006cd6d225a857d6375d591d63 232 SMART SM00448 2 111 1.2E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS03510 79eddf006cd6d225a857d6375d591d63 232 Gene3D G3DSA:1.10.10.10 121 232 1.7E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03510 79eddf006cd6d225a857d6375d591d63 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.5E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS03510 79eddf006cd6d225a857d6375d591d63 232 Gene3D G3DSA:3.40.50.2300 2 120 1.3E-38 T 29-03-2018 AM460_RS03510 79eddf006cd6d225a857d6375d591d63 232 SMART SM00862 152 228 9.7E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS03510 79eddf006cd6d225a857d6375d591d63 232 SUPERFAMILY SSF52172 2 188 6.69E-42 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS03510 79eddf006cd6d225a857d6375d591d63 232 Pfam PF00072 Response regulator receiver domain 4 112 4.5E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS18985 855cf84be40338e37f73b6ad1b96c13c 231 Gene3D G3DSA:3.10.490.10 32 221 7.6E-34 T 29-03-2018 AM460_RS18985 855cf84be40338e37f73b6ad1b96c13c 231 SUPERFAMILY SSF110857 47 161 2.62E-10 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AM460_RS18985 855cf84be40338e37f73b6ad1b96c13c 231 Pfam PF04752 ChaC-like protein 47 215 6.2E-56 T 29-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 SUPERFAMILY SSF100950 74 236 8.06E-31 T 29-03-2018 AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 SMART SM00420 8 57 7.0E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 1.0E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 1.9E-45 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 Gene3D G3DSA:1.10.10.10 1 76 7.1E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 Gene3D G3DSA:3.40.50.1360 77 236 5.0E-30 T 29-03-2018 AM460_RS22105 a6a84d5354cf703681f0d02b0c5c8750 252 SMART SM01134 73 234 1.4E-56 T 29-03-2018 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 Gene3D G3DSA:1.20.5.1030 68 119 1.6E-18 T 29-03-2018 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM460_RS03145 d7fac8c3b32b51f5695354313167117d 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 29-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 124 5.9E-15 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 Gene3D G3DSA:3.40.350.10 2 127 1.3E-17 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 Pfam PF00557 Metallopeptidase family M24 134 342 2.5E-65 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 Gene3D G3DSA:3.90.230.10 128 358 7.6E-79 T 29-03-2018 AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 5.8E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 PRINTS PR00599 Methionine aminopeptidase-1 signature 310 322 5.8E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 SUPERFAMILY SSF53092 7 127 5.23E-14 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AM460_RS12400 8f7c0dab91b605f4a7352d32330f3644 361 SUPERFAMILY SSF55920 127 355 3.01E-76 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS18815 b7cf7c24afbdd6b77a39a81d93ce65da 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 4.9E-47 T 29-03-2018 IPR007376 dsDNA mimic, putative AM460_RS18815 b7cf7c24afbdd6b77a39a81d93ce65da 109 SUPERFAMILY SSF102816 3 109 7.32E-51 T 29-03-2018 IPR007376 dsDNA mimic, putative AM460_RS18815 b7cf7c24afbdd6b77a39a81d93ce65da 109 PIRSF PIRSF004916 1 109 2.9E-58 T 29-03-2018 IPR007376 dsDNA mimic, putative AM460_RS18815 b7cf7c24afbdd6b77a39a81d93ce65da 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 1.0E-53 T 29-03-2018 IPR007376 dsDNA mimic, putative AM460_RS18815 b7cf7c24afbdd6b77a39a81d93ce65da 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 35.934 T 29-03-2018 IPR007376 dsDNA mimic, putative AM460_RS18815 b7cf7c24afbdd6b77a39a81d93ce65da 109 Gene3D G3DSA:3.10.450.140 10 108 8.9E-46 T 29-03-2018 IPR007376 dsDNA mimic, putative AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 Gene3D G3DSA:1.25.20.10 28 390 8.1E-52 T 29-03-2018 AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 SUPERFAMILY SSF53955 479 641 8.13E-52 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 Pfam PF01464 Transglycosylase SLT domain 483 595 4.2E-34 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 Gene3D G3DSA:1.10.1240.20 404 472 4.6E-20 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 472 4.3E-23 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 Gene3D G3DSA:1.10.530.10 473 645 1.8E-40 T 29-03-2018 AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM460_RS00160 c93636744efe88006e30d4a212864bb4 645 SUPERFAMILY SSF48435 28 477 1.29E-137 T 29-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 Gene3D G3DSA:3.40.228.10 1 269 9.8E-70 T 29-03-2018 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 SUPERFAMILY SSF50692 675 804 2.07E-42 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 SUPERFAMILY SSF50692 624 648 2.07E-42 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 Gene3D G3DSA:3.40.228.10 549 628 1.4E-13 T 29-03-2018 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 Gene3D G3DSA:3.40.50.740 270 449 5.1E-26 T 29-03-2018 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 Pfam PF00384 Molybdopterin oxidoreductase 2 378 1.6E-20 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 SUPERFAMILY SSF53706 1 639 9.42E-231 T 29-03-2018 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 Pfam PF01568 Molydopterin dinucleotide binding domain 682 797 3.5E-16 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 Gene3D G3DSA:2.40.40.20 629 804 4.0E-40 T 29-03-2018 AM460_RS03600 208140dbe3e7c30da42103ee3c6409f9 804 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 803 0.0 T 29-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 AM460_RS11470 1db686207bf39420abc2c7041faa1967 232 Pfam PF03942 DTW domain 30 211 2.7E-43 T 29-03-2018 IPR005636 DTW AM460_RS11470 1db686207bf39420abc2c7041faa1967 232 SMART SM01144 27 218 2.7E-71 T 29-03-2018 IPR005636 DTW AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.515 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 SUPERFAMILY SSF50249 1 105 1.18E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 Gene3D G3DSA:3.30.930.10 131 586 1.3E-102 T 29-03-2018 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 5.8E-17 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 SUPERFAMILY SSF55261 288 419 1.42E-47 T 29-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 Gene3D G3DSA:2.40.50.140 1 107 1.3E-26 T 29-03-2018 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 8.1E-107 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 Pfam PF02938 GAD domain 307 406 2.0E-32 T 29-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 SUPERFAMILY SSF55681 108 287 1.7E-106 T 29-03-2018 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 SUPERFAMILY SSF55681 420 584 1.7E-106 T 29-03-2018 AM460_RS15640 139c2406a3e98fda624177b3d35c41bd 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 1.3E-280 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM460_RS25010 eb4176be19248f5a343981f0ba58ee23 258 Gene3D G3DSA:1.10.443.10 31 227 1.3E-25 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS25010 eb4176be19248f5a343981f0ba58ee23 258 Pfam PF00589 Phage integrase family 77 206 8.6E-15 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS25010 eb4176be19248f5a343981f0ba58ee23 258 SUPERFAMILY SSF56349 3 216 6.18E-39 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS19820 f588787b97ca5eabb31d6bd538c836d5 98 ProDom PD084412 GAM INHIBITOR HOST-NUCLEASE BACTERIPHAGE CP-933V BP- 933W PROPHAGE 1 98 2.0E-50 T 29-03-2018 IPR009274 Host-nuclease inhibitor Gam GO:0060703 AM460_RS19820 f588787b97ca5eabb31d6bd538c836d5 98 Pfam PF06064 Host-nuclease inhibitor protein Gam 1 98 2.8E-63 T 29-03-2018 IPR009274 Host-nuclease inhibitor Gam GO:0060703 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 SUPERFAMILY SSF48179 210 369 6.8E-42 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 SUPERFAMILY SSF48179 349 484 2.89E-40 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 SUPERFAMILY SSF51735 30 209 6.06E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 1.4E-21 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.3E-28 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 485 38.86 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 Gene3D G3DSA:1.10.1040.10 210 487 1.2E-88 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 Gene3D G3DSA:3.40.50.720 56 208 6.5E-52 T 29-03-2018 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 Gene3D G3DSA:3.40.50.720 1 42 7.3E-5 T 29-03-2018 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-58 T 29-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM460_RS04320 efb0fe49894d94e2cfcc72b50e818cfc 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.1E-137 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 Gene3D G3DSA:3.40.50.1220 191 355 2.1E-54 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 2.0E-284 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 Gene3D G3DSA:3.40.50.970 356 558 8.4E-53 T 29-03-2018 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 1.6E-49 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 7.2E-58 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 SUPERFAMILY SSF52467 189 362 9.33E-63 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 SUPERFAMILY SSF52518 371 567 8.58E-69 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 2.5E-46 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 Gene3D G3DSA:3.40.50.970 1 182 1.3E-65 T 29-03-2018 AM460_RS26000 eaadc7f9ce407d7f2c96543a0b8092ac 574 SUPERFAMILY SSF52518 2 179 9.51E-64 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 SUPERFAMILY SSF56024 209 437 4.71E-36 T 29-03-2018 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 SUPERFAMILY SSF56024 17 193 1.79E-39 T 29-03-2018 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 Gene3D G3DSA:3.30.870.10 259 461 7.5E-27 T 29-03-2018 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 Gene3D G3DSA:3.30.870.10 12 197 4.3E-29 T 29-03-2018 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 Hamap MF_01918 Cardiolipin synthase C [clsC]. 40 473 73.574 T 29-03-2018 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 Pfam PF13091 PLD-like domain 274 417 3.7E-28 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 Pfam PF13091 PLD-like domain 39 184 3.3E-13 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 SMART SM00155 364 391 3.4E-7 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS20340 f54a84376fb66505f09c5bd38bc091b5 473 SMART SM00155 125 152 0.013 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS02520 bc046d47d24e0c4b6b47f88aff85c6bd 188 Gene3D G3DSA:1.10.3820.10 112 183 7.8E-10 T 29-03-2018 AM460_RS02520 bc046d47d24e0c4b6b47f88aff85c6bd 188 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 36 171 1.3E-59 T 29-03-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 AM460_RS02520 bc046d47d24e0c4b6b47f88aff85c6bd 188 Pfam PF13435 Cytochrome c554 and c-prime 37 83 0.011 T 29-03-2018 IPR023155 Cytochrome c-552/4 AM460_RS02520 bc046d47d24e0c4b6b47f88aff85c6bd 188 SUPERFAMILY SSF48695 5 169 4.95E-31 T 29-03-2018 IPR011031 Multihaem cytochrome AM460_RS02520 bc046d47d24e0c4b6b47f88aff85c6bd 188 Gene3D G3DSA:3.90.10.10 28 111 3.9E-10 T 29-03-2018 AM460_RS02520 bc046d47d24e0c4b6b47f88aff85c6bd 188 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 133 171 6.4E-5 T 29-03-2018 IPR010177 Doubled CXXCH motif AM460_RS08925 a2ccc56a227bba437ef1477c9f531d20 49 Pfam PF05321 Haemolysin expression modulating protein 1 46 8.6E-23 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS08925 a2ccc56a227bba437ef1477c9f531d20 49 SUPERFAMILY SSF68989 1 48 2.09E-22 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS08925 a2ccc56a227bba437ef1477c9f531d20 49 Gene3D G3DSA:1.20.1280.40 1 48 2.9E-23 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.6E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 5.0E-241 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 1.4E-45 T 29-03-2018 IPR001162 UvrC family homology region AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Gene3D G3DSA:1.10.150.20 568 609 8.0E-11 T 29-03-2018 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 SUPERFAMILY SSF46600 190 243 3.4E-14 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 SMART SM00278 588 607 2.9 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 SMART SM00278 556 575 0.76 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 SMART SM00465 17 98 2.2E-23 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 SUPERFAMILY SSF47781 521 606 2.22E-17 T 29-03-2018 IPR010994 RuvA domain 2-like AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 5.3E-8 T 29-03-2018 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.441 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Pfam PF02151 UvrB/uvrC motif 205 237 4.9E-10 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Gene3D G3DSA:1.10.150.20 526 567 0.44 T 29-03-2018 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 SUPERFAMILY SSF82771 17 100 3.01E-24 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Gene3D G3DSA:4.10.860.10 182 242 3.3E-16 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM460_RS15105 461799c9cd3c68da7ff8668881953f7b 610 Gene3D G3DSA:3.40.1440.10 4 101 6.5E-24 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 PIRSF PIRSF004750 6 282 2.5E-131 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 Pfam PF14489 QueF-like protein 196 270 2.6E-27 T 29-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 TIGRFAM TIGR03138 QueF: queuine synthase 11 282 2.0E-130 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 168.918 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 Gene3D G3DSA:3.30.1130.10 144 282 1.2E-48 T 29-03-2018 AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 Gene3D G3DSA:3.30.1130.10 21 136 1.5E-39 T 29-03-2018 AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 SUPERFAMILY SSF55620 186 268 1.04E-10 T 29-03-2018 AM460_RS10300 f64e91ec170747958cd63ff72e21e4cd 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 3.5E-49 T 29-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM460_RS26130 c83b7f51b5e87503ffcec6545cbeb351 784 Gene3D G3DSA:2.60.450.10 43 209 5.7E-17 T 29-03-2018 AM460_RS26130 c83b7f51b5e87503ffcec6545cbeb351 784 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 763 21.367 T 29-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AM460_RS26130 c83b7f51b5e87503ffcec6545cbeb351 784 Pfam PF04453 Organic solvent tolerance protein 309 697 1.0E-111 T 29-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AM460_RS26130 c83b7f51b5e87503ffcec6545cbeb351 784 Gene3D G3DSA:2.40.160.10 319 748 2.4E-9 T 29-03-2018 AM460_RS26130 c83b7f51b5e87503ffcec6545cbeb351 784 Pfam PF03968 OstA-like protein 53 194 3.8E-28 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 418 3.8E-147 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 275 1.6E-69 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 SUPERFAMILY SSF51419 25 277 7.41E-59 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 8.6E-28 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.6E-28 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 8.6E-28 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 8.6E-28 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 40.204 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Gene3D G3DSA:3.20.20.10 34 262 7.8E-49 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 SUPERFAMILY SSF50621 250 419 5.65E-60 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Gene3D G3DSA:2.40.37.10 263 420 4.0E-48 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 376 5.8E-26 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 2.3E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 2.3E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 2.3E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 2.3E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS09910 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 2.3E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM460_RS13260 69e9e9edc0ae3a6bb2a2fcabaff55827 351 Gene3D G3DSA:3.10.520.10 26 342 3.4E-52 T 29-03-2018 AM460_RS13260 69e9e9edc0ae3a6bb2a2fcabaff55827 351 Pfam PF02424 ApbE family 42 325 4.6E-79 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM460_RS13260 69e9e9edc0ae3a6bb2a2fcabaff55827 351 SUPERFAMILY SSF143631 34 346 4.45E-94 T 29-03-2018 IPR003374 ApbE-like domain AM460_RS13260 69e9e9edc0ae3a6bb2a2fcabaff55827 351 PIRSF PIRSF006268 2 347 2.4E-89 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM460_RS20050 9ff6dd7a7b30ba73eab5708460772111 119 Gene3D G3DSA:3.30.428.10 2 115 1.1E-29 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM460_RS20050 9ff6dd7a7b30ba73eab5708460772111 119 Pfam PF01230 HIT domain 12 109 5.7E-30 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM460_RS20050 9ff6dd7a7b30ba73eab5708460772111 119 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 29-03-2018 IPR019808 Histidine triad, conserved site AM460_RS20050 9ff6dd7a7b30ba73eab5708460772111 119 SUPERFAMILY SSF54197 3 113 1.33E-35 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM460_RS20050 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 6 22 6.0E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM460_RS20050 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 95 105 6.0E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM460_RS20050 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 27 45 6.0E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM460_RS26265 b20066010f6faf419c435f0018d04469 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 7.0E-43 T 29-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 Gene3D G3DSA:3.40.50.720 1 128 8.8E-29 T 29-03-2018 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 29-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.14 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 PIRSF PIRSF000161 4 272 4.3E-92 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF55347 131 240 1.44E-37 T 29-03-2018 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 4.5E-41 T 29-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 Gene3D G3DSA:3.30.360.10 130 238 1.7E-35 T 29-03-2018 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 1.1E-112 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS26265 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF51735 4 130 2.65E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS26265 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF51735 240 272 2.65E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS09475 ed7d47b2a7d741499bb126e0e549e0ed 302 SMART SM00244 31 193 5.3E-12 T 29-03-2018 IPR001107 Band 7 domain AM460_RS09475 ed7d47b2a7d741499bb126e0e549e0ed 302 SUPERFAMILY SSF117892 62 197 1.7E-11 T 29-03-2018 IPR001107 Band 7 domain AM460_RS09475 ed7d47b2a7d741499bb126e0e549e0ed 302 Pfam PF01145 SPFH domain / Band 7 family 35 210 6.1E-27 T 29-03-2018 IPR001107 Band 7 domain AM460_RS24635 2c47c935ea37606fe7576f80b6adc2f8 427 Gene3D G3DSA:3.20.20.140 67 365 5.8E-46 T 29-03-2018 AM460_RS24635 2c47c935ea37606fe7576f80b6adc2f8 427 Gene3D G3DSA:2.30.40.10 7 66 3.4E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS24635 2c47c935ea37606fe7576f80b6adc2f8 427 SUPERFAMILY SSF51556 57 376 3.72E-109 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS24635 2c47c935ea37606fe7576f80b6adc2f8 427 SUPERFAMILY SSF51338 6 65 2.21E-12 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS24635 2c47c935ea37606fe7576f80b6adc2f8 427 Pfam PF07969 Amidohydrolase family 48 405 4.7E-57 T 29-03-2018 IPR013108 Amidohydrolase 3 AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 Pfam PF00884 Sulfatase 58 408 1.4E-101 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 ProSitePatterns PS00149 Sulfatases signature 2. 175 185 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 Gene3D G3DSA:3.40.720.10 54 306 3.5E-54 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 Gene3D G3DSA:3.40.720.10 307 436 3.2E-27 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 ProSitePatterns PS00523 Sulfatases signature 1. 130 142 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 Gene3D G3DSA:3.30.1120.10 466 556 1.2E-7 T 29-03-2018 AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 SUPERFAMILY SSF53649 481 535 6.83E-99 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 SUPERFAMILY SSF53649 57 82 6.83E-99 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS17425 1075c9ed37da39789755d1faaadf79c6 560 SUPERFAMILY SSF53649 109 445 6.83E-99 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS22095 f19ce7832e4c8c77dac3364c7b25a5d4 410 Pfam PF07690 Major Facilitator Superfamily 27 361 2.0E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS22095 f19ce7832e4c8c77dac3364c7b25a5d4 410 SUPERFAMILY SSF103473 21 399 2.22E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS22095 f19ce7832e4c8c77dac3364c7b25a5d4 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS22095 f19ce7832e4c8c77dac3364c7b25a5d4 410 Gene3D G3DSA:1.20.1250.20 8 202 1.5E-25 T 29-03-2018 AM460_RS22095 f19ce7832e4c8c77dac3364c7b25a5d4 410 Gene3D G3DSA:1.20.1250.20 205 403 1.1E-8 T 29-03-2018 AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 SUPERFAMILY SSF50331 123 192 4.62E-17 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 PIRSF PIRSF005763 1 262 5.3E-101 T 29-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 Gene3D G3DSA:2.40.50.100 108 184 1.6E-17 T 29-03-2018 AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 SUPERFAMILY SSF46785 2 106 2.61E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 Gene3D G3DSA:1.10.10.10 1 107 1.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.1E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 Pfam PF03459 TOBE domain 125 187 6.9E-12 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 Pfam PF03459 TOBE domain 199 257 9.2E-14 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 4.2E-41 T 29-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 Gene3D G3DSA:2.40.50.100 185 252 4.8E-14 T 29-03-2018 AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 SUPERFAMILY SSF50331 200 259 1.74E-14 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS22520 0b06eab3efde23ce54d4f3d54d8c0318 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 2.7E-28 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM460_RS08380 9097f034db72cf7bc5302e52f6a1850d 315 Pfam PF01497 Periplasmic binding protein 97 254 1.2E-19 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS08380 9097f034db72cf7bc5302e52f6a1850d 315 SUPERFAMILY SSF53807 22 293 4.32E-42 T 29-03-2018 AM460_RS08380 9097f034db72cf7bc5302e52f6a1850d 315 Gene3D G3DSA:3.40.50.1980 19 134 1.3E-21 T 29-03-2018 AM460_RS08380 9097f034db72cf7bc5302e52f6a1850d 315 Gene3D G3DSA:3.40.50.1980 135 315 8.0E-26 T 29-03-2018 AM460_RS22920 0791e3a65ee6629fa7d1b8450305c4f7 176 Pfam PF00258 Flavodoxin 6 160 2.6E-34 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM460_RS22920 0791e3a65ee6629fa7d1b8450305c4f7 176 PIRSF PIRSF038996 1 172 2.7E-71 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM460_RS22920 0791e3a65ee6629fa7d1b8450305c4f7 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM460_RS22920 0791e3a65ee6629fa7d1b8450305c4f7 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.6E-78 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM460_RS22920 0791e3a65ee6629fa7d1b8450305c4f7 176 Gene3D G3DSA:3.40.50.360 4 170 5.2E-40 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS22920 0791e3a65ee6629fa7d1b8450305c4f7 176 SUPERFAMILY SSF52218 5 170 1.96E-54 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS14890 1ecda712ecc0898671c675ed2146c0fb 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.4E-33 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS14890 1ecda712ecc0898671c675ed2146c0fb 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.4E-33 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS14890 1ecda712ecc0898671c675ed2146c0fb 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.4E-33 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS14890 1ecda712ecc0898671c675ed2146c0fb 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.4E-33 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS14890 1ecda712ecc0898671c675ed2146c0fb 261 Pfam PF01311 Bacterial export proteins, family 1 14 246 2.3E-68 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS14890 1ecda712ecc0898671c675ed2146c0fb 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 2.9E-82 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 SMART SM00382 369 563 1.7E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 Pfam PF00664 ABC transporter transmembrane region 68 277 7.2E-21 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 SUPERFAMILY SSF90123 16 331 3.66E-44 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 Gene3D G3DSA:3.40.50.300 332 585 6.3E-73 T 29-03-2018 AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 Gene3D G3DSA:1.20.1560.10 5 331 1.4E-36 T 29-03-2018 AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 SUPERFAMILY SSF52540 337 579 2.41E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14725 9e8481fff41f9d62b1a147641180ab76 600 Pfam PF00005 ABC transporter 360 509 2.5E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS01995 b715da47d04f9735194c841a1b3d28d5 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 27.602 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM460_RS01995 b715da47d04f9735194c841a1b3d28d5 119 PIRSF PIRSF000179 1 119 4.2E-53 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM460_RS01995 b715da47d04f9735194c841a1b3d28d5 119 SUPERFAMILY SSF81343 1 119 2.62E-53 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01995 b715da47d04f9735194c841a1b3d28d5 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 106 8.0E-47 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM460_RS01995 b715da47d04f9735194c841a1b3d28d5 119 Gene3D G3DSA:1.20.1300.10 1 119 1.2E-32 T 29-03-2018 AM460_RS01995 b715da47d04f9735194c841a1b3d28d5 119 Pfam PF02313 Fumarate reductase subunit D 6 116 6.7E-52 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.284 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:3.40.50.300 2 73 7.3E-11 T 29-03-2018 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:3.40.50.300 74 203 7.6E-31 T 29-03-2018 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF50465 298 393 2.62E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.7E-34 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.5E-240 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 5.4E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.0E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-33 T 29-03-2018 AM460_RS03150 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:2.40.30.10 206 299 1.3E-32 T 29-03-2018 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 2.0E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 SMART SM00421 153 210 1.8E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 SUPERFAMILY SSF46894 148 212 2.75E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS20380 afffccf5eb53997c8ae631a30c1bbb83 216 Gene3D G3DSA:1.10.10.10 118 214 1.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10205 0cc55ff923e862429efd22af0603e31d 365 Gene3D G3DSA:2.40.240.50 58 259 9.5E-63 T 29-03-2018 AM460_RS10205 0cc55ff923e862429efd22af0603e31d 365 SMART SM00925 125 257 2.4E-70 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM460_RS10205 0cc55ff923e862429efd22af0603e31d 365 Pfam PF06725 3D domain 277 354 3.5E-25 T 29-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AM460_RS10205 0cc55ff923e862429efd22af0603e31d 365 SUPERFAMILY SSF50685 25 353 1.46E-116 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM460_RS10205 0cc55ff923e862429efd22af0603e31d 365 PIRSF PIRSF019422 145 365 9.1E-75 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AM460_RS10205 0cc55ff923e862429efd22af0603e31d 365 PIRSF PIRSF019422 1 147 8.8E-21 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AM460_RS10205 0cc55ff923e862429efd22af0603e31d 365 Pfam PF03562 MltA specific insert domain 87 257 4.7E-41 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM460_RS04085 305f37f90f52116015b70e3ce2971b67 138 ProDom PD084423 MEMBRANE INNER YIGG STY3605 TRANSMEMBRANE 13 138 9.0E-38 T 29-03-2018 IPR020332 Uncharacterised protein family, inner membrane YigG AM460_RS20465 9d11f40d008e93bed578053cf31c8931 375 SUPERFAMILY SSF49503 16 116 6.39E-6 T 29-03-2018 IPR008972 Cupredoxin AM460_RS20465 9d11f40d008e93bed578053cf31c8931 375 Pfam PF13473 Cupredoxin-like domain 13 115 2.4E-24 T 29-03-2018 IPR028096 EfeO-type cupredoxin-like domain AM460_RS20465 9d11f40d008e93bed578053cf31c8931 375 Pfam PF09375 Imelysin 135 368 1.1E-43 T 29-03-2018 IPR018976 Peptidase M75, Imelysin AM460_RS18865 fdac5ebd57f1155340d7ac31bae488cd 137 Pfam PF00816 H-NS histone family 32 127 1.8E-20 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM460_RS18865 fdac5ebd57f1155340d7ac31bae488cd 137 PIRSF PIRSF002096 1 135 5.2E-58 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM460_RS18865 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 93 136 1.02E-12 T 29-03-2018 AM460_RS18865 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 2 58 5.1E-18 T 29-03-2018 AM460_RS18865 fdac5ebd57f1155340d7ac31bae488cd 137 SMART SM00528 87 135 1.0E-26 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM460_RS18865 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:4.10.430.10 93 135 4.3E-20 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM460_RS18865 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:1.10.287.1050 1 57 9.1E-26 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 SUPERFAMILY SSF52540 8 205 2.58E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 42.04 T 29-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 Gene3D G3DSA:3.40.50.300 4 213 6.8E-56 T 29-03-2018 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 1.9E-98 T 29-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 9.8E-45 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-39 T 29-03-2018 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-39 T 29-03-2018 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-39 T 29-03-2018 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-39 T 29-03-2018 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-39 T 29-03-2018 AM460_RS14035 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-39 T 29-03-2018 AM460_RS16030 9ecc1d8c1c619afd50682cff8e257c4f 84 Pfam PF03891 Domain of unknown function (DUF333) 32 78 9.0E-19 T 29-03-2018 IPR005590 Protein of unknown function DUF333 AM460_RS12815 eecd7b2c6b3a987ba98e1836a051c2e6 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 2.7E-110 T 29-03-2018 IPR010099 Epimerase family protein SDR39U1 AM460_RS12815 eecd7b2c6b3a987ba98e1836a051c2e6 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 6.7E-19 T 29-03-2018 IPR013549 Domain of unknown function DUF1731 AM460_RS12815 eecd7b2c6b3a987ba98e1836a051c2e6 297 SUPERFAMILY SSF51735 1 296 5.11E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS12815 eecd7b2c6b3a987ba98e1836a051c2e6 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 1.0E-21 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM460_RS12815 eecd7b2c6b3a987ba98e1836a051c2e6 297 Gene3D G3DSA:3.40.50.720 1 297 1.5E-39 T 29-03-2018 AM460_RS17840 74101bc33104b8f8cf019df3d9166aa5 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 14 61 5.0E-21 T 29-03-2018 AM460_RS17840 74101bc33104b8f8cf019df3d9166aa5 61 Pfam PF13617 YnbE-like lipoprotein 5 59 1.7E-27 T 29-03-2018 IPR025985 YnbE-like lipoprotein AM460_RS14120 19d2d2634f55e87a3ddc3d3e97e65715 366 SUPERFAMILY SSF53756 5 333 1.69E-30 T 29-03-2018 AM460_RS14120 19d2d2634f55e87a3ddc3d3e97e65715 366 Pfam PF00534 Glycosyl transferases group 1 191 342 5.8E-18 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM460_RS14120 19d2d2634f55e87a3ddc3d3e97e65715 366 Gene3D G3DSA:3.40.50.2000 140 364 2.9E-21 T 29-03-2018 AM460_RS09690 ce5fc70c3325f5b68e47005b131e7ac5 326 SUPERFAMILY SSF101790 244 325 1.57E-25 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM460_RS09690 ce5fc70c3325f5b68e47005b131e7ac5 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 4.9E-26 T 29-03-2018 IPR017703 YgfZ/GcvT conserved site AM460_RS09690 ce5fc70c3325f5b68e47005b131e7ac5 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 49.533 T 29-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AM460_RS09690 ce5fc70c3325f5b68e47005b131e7ac5 326 SUPERFAMILY SSF103025 6 242 2.83E-67 T 29-03-2018 AM460_RS09690 ce5fc70c3325f5b68e47005b131e7ac5 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 135 1.1E-8 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AM460_RS09690 ce5fc70c3325f5b68e47005b131e7ac5 326 Gene3D G3DSA:3.30.70.1400 27 240 7.1E-25 T 29-03-2018 AM460_RS09690 ce5fc70c3325f5b68e47005b131e7ac5 326 PIRSF PIRSF006487 15 284 4.6E-10 T 29-03-2018 AM460_RS22100 fc75888a032d59ad0ef8f5c7c9716233 198 Gene3D G3DSA:1.20.144.10 11 180 6.0E-24 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS22100 fc75888a032d59ad0ef8f5c7c9716233 198 Pfam PF01569 PAP2 superfamily 58 165 5.5E-13 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS22100 fc75888a032d59ad0ef8f5c7c9716233 198 SMART SM00014 57 165 6.0E-32 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS22100 fc75888a032d59ad0ef8f5c7c9716233 198 SUPERFAMILY SSF48317 1 196 1.07E-42 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS07505 da252a2c9269b079bc15906d45923c9b 419 Gene3D G3DSA:3.65.10.10 21 219 5.3E-51 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM460_RS07505 da252a2c9269b079bc15906d45923c9b 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 5.5E-131 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM460_RS07505 da252a2c9269b079bc15906d45923c9b 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.1E-184 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS07505 da252a2c9269b079bc15906d45923c9b 419 SUPERFAMILY SSF55205 1 418 4.25E-147 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM460_RS07505 da252a2c9269b079bc15906d45923c9b 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.406 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS07505 da252a2c9269b079bc15906d45923c9b 419 Gene3D G3DSA:3.65.10.10 220 418 5.5E-49 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM460_RS17435 1e0c215d6ab0a8bf1639b7e2462a4544 302 Pfam PF05193 Peptidase M16 inactive domain 73 233 3.0E-16 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM460_RS17435 1e0c215d6ab0a8bf1639b7e2462a4544 302 Gene3D G3DSA:3.30.830.10 119 302 7.7E-19 T 29-03-2018 AM460_RS17435 1e0c215d6ab0a8bf1639b7e2462a4544 302 Gene3D G3DSA:3.30.830.10 2 110 1.7E-8 T 29-03-2018 AM460_RS17435 1e0c215d6ab0a8bf1639b7e2462a4544 302 SUPERFAMILY SSF63411 127 291 3.67E-17 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS17435 1e0c215d6ab0a8bf1639b7e2462a4544 302 SUPERFAMILY SSF63411 6 109 4.89E-11 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS03710 ba50c6d634825c83b8e72e7442eb0cf7 295 Gene3D G3DSA:3.20.20.70 8 294 2.1E-58 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03710 ba50c6d634825c83b8e72e7442eb0cf7 295 PIRSF PIRSF037840 1 295 2.5E-140 T 29-03-2018 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 AM460_RS03710 ba50c6d634825c83b8e72e7442eb0cf7 295 SUPERFAMILY SSF51569 9 290 9.16E-60 T 29-03-2018 AM460_RS03710 ba50c6d634825c83b8e72e7442eb0cf7 295 SMART SM01133 20 262 9.3E-7 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS03710 ba50c6d634825c83b8e72e7442eb0cf7 295 Hamap MF_01912 Sulfofructosephosphate aldolase. 5 295 68.133 T 29-03-2018 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 AM460_RS03710 ba50c6d634825c83b8e72e7442eb0cf7 295 Pfam PF01791 DeoC/LacD family aldolase 21 261 2.3E-46 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS10380 fc1f2bf975f839694f5b1a06ed00be22 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 40.282 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM460_RS10380 fc1f2bf975f839694f5b1a06ed00be22 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.2E-13 T 29-03-2018 AM460_RS10380 fc1f2bf975f839694f5b1a06ed00be22 223 Gene3D G3DSA:3.20.20.70 24 200 3.3E-12 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS10380 fc1f2bf975f839694f5b1a06ed00be22 223 Pfam PF04055 Radical SAM superfamily 27 132 2.8E-8 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS10380 fc1f2bf975f839694f5b1a06ed00be22 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 2.0E-111 T 29-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM460_RS10380 fc1f2bf975f839694f5b1a06ed00be22 223 PIRSF PIRSF000370 1 223 5.7E-73 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM460_RS10380 fc1f2bf975f839694f5b1a06ed00be22 223 SUPERFAMILY SSF102114 24 119 3.66E-7 T 29-03-2018 AM460_RS17590 c004d08d254af297a7098d4c8086d8ae 499 PIRSF PIRSF006060 23 490 4.7E-66 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS17590 c004d08d254af297a7098d4c8086d8ae 499 Pfam PF00324 Amino acid permease 35 476 1.9E-126 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS17590 c004d08d254af297a7098d4c8086d8ae 499 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS22150 377b631d57889227ea6afa31adbc530a 782 Pfam PF00563 EAL domain 532 767 1.5E-65 T 29-03-2018 IPR001633 EAL domain AM460_RS22150 377b631d57889227ea6afa31adbc530a 782 Pfam PF17153 Periplasmic sensor domain, extracellular 35 150 4.9E-56 T 29-03-2018 IPR033418 Periplasmic sensor domain, extracellular AM460_RS22150 377b631d57889227ea6afa31adbc530a 782 SMART SM00052 526 772 9.9E-107 T 29-03-2018 IPR001633 EAL domain AM460_RS22150 377b631d57889227ea6afa31adbc530a 782 Gene3D G3DSA:3.20.20.450 515 777 6.1E-70 T 29-03-2018 IPR001633 EAL domain AM460_RS22150 377b631d57889227ea6afa31adbc530a 782 SUPERFAMILY SSF141868 532 773 2.22E-68 T 29-03-2018 IPR001633 EAL domain AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 Pfam PF13377 Periplasmic binding protein-like domain 169 329 4.4E-33 T 29-03-2018 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 SUPERFAMILY SSF53822 61 331 5.62E-78 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 Gene3D G3DSA:3.40.50.2300 168 332 1.6E-44 T 29-03-2018 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 SUPERFAMILY SSF47413 1 59 4.74E-19 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 Gene3D G3DSA:1.10.260.40 2 57 4.6E-24 T 29-03-2018 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.3E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 SMART SM00354 1 71 5.4E-36 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS13610 78bc6b146bb21e2cb7dc5fbea6326df3 346 Gene3D G3DSA:3.40.50.2300 58 167 1.3E-23 T 29-03-2018 AM460_RS02400 337d6231b69c775a033de41b863c53e7 311 SUPERFAMILY SSF53822 28 310 4.71E-72 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS02400 337d6231b69c775a033de41b863c53e7 311 Pfam PF13407 Periplasmic binding protein domain 28 288 7.3E-59 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS02400 337d6231b69c775a033de41b863c53e7 311 Gene3D G3DSA:3.40.50.2300 145 300 4.4E-40 T 29-03-2018 AM460_RS02400 337d6231b69c775a033de41b863c53e7 311 Gene3D G3DSA:3.40.50.2300 28 144 3.5E-15 T 29-03-2018 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 Gene3D G3DSA:1.10.10.60 214 268 0.0082 T 29-03-2018 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.0E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 SUPERFAMILY SSF46689 270 318 8.96E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 Gene3D G3DSA:1.10.10.60 269 319 3.8E-14 T 29-03-2018 AM460_RS14720 d92abee5ba151d5e73967c6b6923e9aa 319 SMART SM00342 233 316 2.3E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS25180 a9e82554a7d7ad09c8bc8e1823d5fd80 252 Pfam PF00877 NlpC/P60 family 134 244 9.8E-31 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM460_RS25180 a9e82554a7d7ad09c8bc8e1823d5fd80 252 Gene3D G3DSA:3.90.1720.10 117 251 1.6E-32 T 29-03-2018 AM460_RS25180 a9e82554a7d7ad09c8bc8e1823d5fd80 252 SUPERFAMILY SSF54001 123 246 2.06E-36 T 29-03-2018 AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 SMART SM00062 22 243 1.3E-85 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 SUPERFAMILY SSF53850 1 242 1.77E-71 T 29-03-2018 AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 Gene3D G3DSA:3.40.190.10 15 132 3.4E-36 T 29-03-2018 AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 SMART SM00079 22 243 3.9E-4 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 241 5.3E-93 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 Gene3D G3DSA:3.40.190.10 133 243 2.7E-18 T 29-03-2018 AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM460_RS21985 477fa87d64b87d0342be9646d9089379 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.1E-66 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Gene3D G3DSA:3.30.65.10 100 144 6.5E-12 T 29-03-2018 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Gene3D G3DSA:3.30.65.10 56 99 5.4E-17 T 29-03-2018 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Gene3D G3DSA:3.30.65.10 7 55 5.3E-16 T 29-03-2018 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 SUPERFAMILY SSF57783 60 99 1.65E-13 T 29-03-2018 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Gene3D G3DSA:2.20.28.20 145 180 0.13 T 29-03-2018 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 SUPERFAMILY SSF57783 12 49 3.91E-13 T 29-03-2018 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 167 0.12 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 2.8E-15 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 142 7.0E-16 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM460_RS07005 aee158697d374de78c6a13facbc4a998 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 1.7E-18 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Gene3D G3DSA:1.10.1200.10 964 1053 1.7E-18 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Pfam PF13193 AMP-binding enzyme C-terminal domain 884 952 3.4E-5 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 SUPERFAMILY SSF52777 9 183 4.0E-32 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Pfam PF00550 Phosphopantetheine attachment site 980 1040 7.4E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 886 2.6E-127 T 29-03-2018 IPR010071 Amino acid adenylation domain AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Gene3D G3DSA:2.30.38.10 773 853 4.5E-22 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Pfam PF00975 Thioesterase domain 1067 1282 8.8E-49 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 SUPERFAMILY SSF53474 1050 1290 2.1E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 SUPERFAMILY SSF47336 975 1042 2.22E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 SUPERFAMILY SSF56801 432 989 1.16E-148 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 SMART SM00823 Phosphopantetheine attachment site 977 1046 0.0019 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Gene3D G3DSA:3.40.50.980 453 605 2.5E-44 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 SUPERFAMILY SSF52777 190 426 1.67E-32 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Gene3D G3DSA:3.30.300.30 857 963 1.5E-26 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Pfam PF00668 Condensation domain 2 442 3.1E-109 T 29-03-2018 IPR001242 Condensation domain AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Gene3D G3DSA:3.30.559.10 1 208 6.5E-19 T 29-03-2018 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Pfam PF00501 AMP-binding enzyme 462 863 3.1E-99 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 SMART SM00824 Thioesterase 1069 1259 4.1E-4 T 29-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Gene3D G3DSA:3.40.50.1820 1054 1292 1.0E-19 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS23470 51f929cd4b332f91ed8b7c524b420ce8 1293 Gene3D G3DSA:3.40.50.980 606 767 4.4E-41 T 29-03-2018 AM460_RS11605 511ed5f395f9125b5e134b54e34a64b6 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 2.5E-12 T 29-03-2018 AM460_RS11605 511ed5f395f9125b5e134b54e34a64b6 211 Gene3D G3DSA:3.40.50.1000 1 142 3.3E-6 T 29-03-2018 IPR023214 HAD-like domain AM460_RS11605 511ed5f395f9125b5e134b54e34a64b6 211 SUPERFAMILY SSF56784 6 137 2.21E-7 T 29-03-2018 IPR023214 HAD-like domain AM460_RS11605 511ed5f395f9125b5e134b54e34a64b6 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 2 211 2.0E-135 T 29-03-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM460_RS17660 30a3fceb5f421ce444629daad112b9f3 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 88.352 T 29-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 AM460_RS17660 30a3fceb5f421ce444629daad112b9f3 474 Gene3D G3DSA:3.40.309.10 260 456 9.6E-65 T 29-03-2018 AM460_RS17660 30a3fceb5f421ce444629daad112b9f3 474 SUPERFAMILY SSF53720 2 473 5.37E-157 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS17660 30a3fceb5f421ce444629daad112b9f3 474 Gene3D G3DSA:3.40.605.10 1 259 2.8E-97 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS17660 30a3fceb5f421ce444629daad112b9f3 474 Pfam PF00171 Aldehyde dehydrogenase family 13 470 1.1E-165 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS17660 30a3fceb5f421ce444629daad112b9f3 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 0.0 T 29-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 AM460_RS17660 30a3fceb5f421ce444629daad112b9f3 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM460_RS24010 6d41a83e06643bdacab599c5dd5ed77c 183 Pfam PF00156 Phosphoribosyl transferase domain 31 156 2.2E-15 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM460_RS24010 6d41a83e06643bdacab599c5dd5ed77c 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 2.8E-75 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM460_RS24010 6d41a83e06643bdacab599c5dd5ed77c 183 Gene3D G3DSA:3.40.50.2020 4 180 1.5E-43 T 29-03-2018 AM460_RS24010 6d41a83e06643bdacab599c5dd5ed77c 183 SUPERFAMILY SSF53271 12 180 7.1E-53 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS24010 6d41a83e06643bdacab599c5dd5ed77c 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 39.352 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM460_RS15705 bb950be7d212ef42cc91b1a84316b90f 323 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 6.9E-157 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AM460_RS15705 bb950be7d212ef42cc91b1a84316b90f 323 PIRSF PIRSF026649 9 314 9.2E-106 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM460_RS15705 bb950be7d212ef42cc91b1a84316b90f 323 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 3.5E-110 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM460_RS15705 bb950be7d212ef42cc91b1a84316b90f 323 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 53.814 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AM460_RS08370 f0a317cc9b5c6ea144ba2f3a064745d0 327 Gene3D G3DSA:1.10.3470.10 1 327 2.2E-60 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS08370 f0a317cc9b5c6ea144ba2f3a064745d0 327 SUPERFAMILY SSF81345 3 324 3.66E-75 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS08370 f0a317cc9b5c6ea144ba2f3a064745d0 327 Pfam PF01032 FecCD transport family 14 323 1.5E-86 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS19865 25884ac4e860a7673cb5d1cb187a5c2e 78 SUPERFAMILY SSF46955 4 78 1.61E-18 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS19865 25884ac4e860a7673cb5d1cb187a5c2e 78 Gene3D G3DSA:1.10.1660.20 5 76 8.5E-21 T 29-03-2018 AM460_RS19865 25884ac4e860a7673cb5d1cb187a5c2e 78 Pfam PF07825 Excisionase-like protein 5 73 4.6E-6 T 29-03-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM460_RS14565 f4c75c7d903e32b8e3bed8cd33680c7b 214 SUPERFAMILY SSF110849 53 184 1.06E-20 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS14565 f4c75c7d903e32b8e3bed8cd33680c7b 214 Gene3D G3DSA:3.90.1530.10 46 155 4.4E-11 T 29-03-2018 AM460_RS14565 f4c75c7d903e32b8e3bed8cd33680c7b 214 SMART SM00470 55 151 5.9E-4 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS14565 f4c75c7d903e32b8e3bed8cd33680c7b 214 Pfam PF02195 ParB-like nuclease domain 56 149 5.0E-9 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF00912 Transglycosylase 55 229 5.6E-65 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 609 2.8E-24 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:3.40.710.10 412 799 3.7E-92 T 29-03-2018 AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 422 610 4.3E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 211 233 4.3E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 672 832 4.3E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 262 313 4.3E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF53955 43 256 1.69E-80 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:2.40.50.140 348 411 1.1E-22 T 29-03-2018 AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 758 1.1E-173 T 29-03-2018 AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:1.10.3810.10 47 246 1.5E-83 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS06445 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 1.7E-31 T 29-03-2018 IPR031376 Penicillin-binding protein, OB-like domain AM460_RS06360 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SMART SM00899 1 72 4.2E-8 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM460_RS06360 b994f7e159789c2d72f9d9ecfbe6ddb1 75 Gene3D G3DSA:2.30.30.90 1 75 4.4E-14 T 29-03-2018 AM460_RS06360 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SUPERFAMILY SSF50037 2 73 7.33E-17 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal AM460_RS06360 b994f7e159789c2d72f9d9ecfbe6ddb1 75 Pfam PF04023 FeoA domain 5 71 3.3E-8 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM460_RS08215 465f0ec8b31c1d62002d8d53fe744482 433 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 4 88 0.005 T 29-03-2018 AM460_RS08215 465f0ec8b31c1d62002d8d53fe744482 433 SMART SM01118 2 202 1.9E-41 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM460_RS08215 465f0ec8b31c1d62002d8d53fe744482 433 SUPERFAMILY SSF55154 1 217 7.36E-54 T 29-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AM460_RS08215 465f0ec8b31c1d62002d8d53fe744482 433 Gene3D G3DSA:2.40.320.10 1 210 1.6E-48 T 29-03-2018 AM460_RS08215 465f0ec8b31c1d62002d8d53fe744482 433 Pfam PF01928 CYTH domain 3 196 3.0E-38 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:3.40.50.300 1 122 2.3E-24 T 29-03-2018 AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:1.10.10.160 123 181 1.5E-16 T 29-03-2018 AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:3.40.50.300 195 666 2.4E-82 T 29-03-2018 AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.7E-73 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 7.4E-71 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 SUPERFAMILY SSF52540 2 636 9.0E-163 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04310 4f3bd13ffc0a183c15498e375df85b6a 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.212 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM460_RS03980 5c9be3301c1ed73bd68cd9dea4b0bbf5 474 Pfam PF06545 Protein of unknown function (DUF1116) 140 354 1.3E-99 T 29-03-2018 IPR009499 Protein of unknown function DUF1116 AM460_RS03980 5c9be3301c1ed73bd68cd9dea4b0bbf5 474 Gene3D G3DSA:3.90.1700.10 302 464 3.3E-71 T 29-03-2018 AM460_RS03980 5c9be3301c1ed73bd68cd9dea4b0bbf5 474 Gene3D G3DSA:1.10.10.660 93 157 1.9E-34 T 29-03-2018 IPR024033 Uncharacterised domain, YlbE AM460_RS03980 5c9be3301c1ed73bd68cd9dea4b0bbf5 474 Gene3D G3DSA:3.90.1710.10 158 299 7.2E-67 T 29-03-2018 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 Gene3D G3DSA:3.40.50.720 1 40 1.3E-6 T 29-03-2018 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 Gene3D G3DSA:3.40.50.720 41 248 9.3E-58 T 29-03-2018 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 177 7.7E-4 T 29-03-2018 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 3.8E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 3.8E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 3.8E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 94 114 2.3E-66 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 198 217 2.3E-66 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 159 182 2.3E-66 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 12 29 2.3E-66 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 224 243 2.3E-66 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 74 91 2.3E-66 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 SUPERFAMILY SSF51735 1 246 6.43E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 8 247 3.0E-108 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM460_RS23415 a4ce6fb1e0015dbb911f2ca5fb7441b1 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 2.5E-52 T 29-03-2018 AM460_RS22660 fd099014143d3032921e3b194d83e0c3 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 95 9.3E-34 T 29-03-2018 IPR011846 Cyd operon protein YbgE AM460_RS22660 fd099014143d3032921e3b194d83e0c3 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 2.6E-42 T 29-03-2018 IPR011846 Cyd operon protein YbgE AM460_RS19135 1241ff5f62eb06cd89b0c7204e20dc13 65 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 57 5.1E-14 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM460_RS19135 1241ff5f62eb06cd89b0c7204e20dc13 65 Gene3D G3DSA:1.10.10.10 6 65 3.7E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS19135 1241ff5f62eb06cd89b0c7204e20dc13 65 SUPERFAMILY SSF46955 6 60 1.26E-5 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS09275 7f69f53704b691ef1c54d32ac135c315 421 Gene3D G3DSA:1.10.150.130 86 200 1.9E-13 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS09275 7f69f53704b691ef1c54d32ac135c315 421 SUPERFAMILY SSF56349 97 388 5.59E-48 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS09275 7f69f53704b691ef1c54d32ac135c315 421 Pfam PF00589 Phage integrase family 211 382 3.2E-16 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS09275 7f69f53704b691ef1c54d32ac135c315 421 Pfam PF13356 Arm DNA-binding domain 3 87 1.8E-21 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM460_RS09275 7f69f53704b691ef1c54d32ac135c315 421 Gene3D G3DSA:1.10.443.10 201 394 9.5E-21 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 Gene3D G3DSA:3.40.190.10 181 274 7.6E-24 T 29-03-2018 AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 SUPERFAMILY SSF53850 94 302 6.05E-34 T 29-03-2018 AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 Gene3D G3DSA:1.10.10.10 7 89 8.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 SUPERFAMILY SSF46785 11 117 3.59E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 Pfam PF03466 LysR substrate binding domain 94 301 1.2E-31 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 Gene3D G3DSA:3.40.190.10 95 180 4.8E-5 T 29-03-2018 AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.9E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.0E-4 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.0E-4 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24900 ce73daf37651189d1c174f154a1c845e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.0E-4 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS19870 74dd21041d8e7695988ffdf14651d6ce 380 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 1 72 1.4E-32 T 29-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 AM460_RS19870 74dd21041d8e7695988ffdf14651d6ce 380 Gene3D G3DSA:1.10.443.10 195 372 2.7E-23 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS19870 74dd21041d8e7695988ffdf14651d6ce 380 SUPERFAMILY SSF56349 84 368 5.0E-53 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS19870 74dd21041d8e7695988ffdf14651d6ce 380 Pfam PF00589 Phage integrase family 195 366 8.6E-22 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS19870 74dd21041d8e7695988ffdf14651d6ce 380 Gene3D G3DSA:3.30.160.60 1 62 6.7E-19 T 29-03-2018 AM460_RS19870 74dd21041d8e7695988ffdf14651d6ce 380 Gene3D G3DSA:1.10.150.130 79 194 1.0E-13 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS06075 4815dbc694c20ce85b8c35f50728adb5 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 1.4E-79 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM460_RS06075 4815dbc694c20ce85b8c35f50728adb5 198 Gene3D G3DSA:3.40.50.150 1 198 8.0E-34 T 29-03-2018 AM460_RS06075 4815dbc694c20ce85b8c35f50728adb5 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 6.9E-63 T 29-03-2018 AM460_RS06075 4815dbc694c20ce85b8c35f50728adb5 198 SUPERFAMILY SSF53335 11 189 5.44E-53 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS06075 4815dbc694c20ce85b8c35f50728adb5 198 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS06075 4815dbc694c20ce85b8c35f50728adb5 198 PIRSF PIRSF004553 11 191 3.9E-62 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 2.6E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:1.10.8.60 154 243 7.1E-20 T 29-03-2018 AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:1.20.272.10 252 346 1.7E-37 T 29-03-2018 AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 SUPERFAMILY SSF52540 6 234 2.72E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:1.10.3710.10 348 447 4.1E-33 T 29-03-2018 AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 SMART SM00382 49 165 2.6E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 SUPERFAMILY SSF48019 252 434 6.23E-71 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 3.5E-64 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 Pfam PF16193 AAA C-terminal domain 188 267 4.5E-23 T 29-03-2018 IPR032423 AAA C-terminal domain AM460_RS21825 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:3.40.50.300 2 153 4.9E-31 T 29-03-2018 AM460_RS07985 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:3.20.20.140 3 88 3.2E-28 T 29-03-2018 AM460_RS07985 362ca19ec97b6ac525bd34a13e2a82da 470 SUPERFAMILY SSF51556 3 465 1.77E-184 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS07985 362ca19ec97b6ac525bd34a13e2a82da 470 Pfam PF02614 Glucuronate isomerase 1 465 4.9E-232 T 29-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AM460_RS07985 362ca19ec97b6ac525bd34a13e2a82da 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.676 T 29-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AM460_RS07985 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:3.20.20.140 89 467 2.0E-156 T 29-03-2018 AM460_RS10505 46757546ac61d5add3fdd2319878e34a 201 SUPERFAMILY SSF52540 24 194 1.3E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10505 46757546ac61d5add3fdd2319878e34a 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 1.2E-89 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM460_RS10505 46757546ac61d5add3fdd2319878e34a 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.735 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM460_RS10505 46757546ac61d5add3fdd2319878e34a 201 Gene3D G3DSA:3.40.50.300 23 201 4.9E-49 T 29-03-2018 AM460_RS10505 46757546ac61d5add3fdd2319878e34a 201 Pfam PF01583 Adenylylsulphate kinase 27 179 1.0E-72 T 29-03-2018 AM460_RS01690 d45a0563341d83316f530b67856ef4a2 513 Gene3D G3DSA:3.40.1080.10 273 511 1.5E-43 T 29-03-2018 AM460_RS01690 d45a0563341d83316f530b67856ef4a2 513 Pfam PF01144 Coenzyme A transferase 6 241 4.6E-26 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS01690 d45a0563341d83316f530b67856ef4a2 513 SUPERFAMILY SSF100950 276 505 7.68E-60 T 29-03-2018 AM460_RS01690 d45a0563341d83316f530b67856ef4a2 513 SMART SM00882 4 242 3.3E-60 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS01690 d45a0563341d83316f530b67856ef4a2 513 Gene3D G3DSA:3.40.1080.10 1 263 7.1E-64 T 29-03-2018 AM460_RS01690 d45a0563341d83316f530b67856ef4a2 513 SUPERFAMILY SSF100950 3 256 4.57E-81 T 29-03-2018 AM460_RS01690 d45a0563341d83316f530b67856ef4a2 513 PIRSF PIRSF000858 1 513 3.5E-196 T 29-03-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 AM460_RS16070 105dcd321e25eb4b15c35b79e622366a 491 Pfam PF17158 Membrane-associated sensor, integral membrane domain 88 319 2.5E-59 T 29-03-2018 IPR033424 Membrane-associated sensor domain AM460_RS16070 105dcd321e25eb4b15c35b79e622366a 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 485 3.0E-44 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16070 105dcd321e25eb4b15c35b79e622366a 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 488 4.1E-36 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16070 105dcd321e25eb4b15c35b79e622366a 491 SMART SM00267 316 489 1.8E-53 T 29-03-2018 IPR000160 GGDEF domain AM460_RS16070 105dcd321e25eb4b15c35b79e622366a 491 SUPERFAMILY SSF55073 333 488 3.45E-36 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS16070 105dcd321e25eb4b15c35b79e622366a 491 Gene3D G3DSA:3.30.70.270 323 490 8.9E-42 T 29-03-2018 AM460_RS04360 a4c4ff7d036b31794f438746bc460e3d 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.5E-17 T 29-03-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 AM460_RS00855 5a22c55d20f18030e04191659a3fa13a 179 Gene3D G3DSA:2.60.40.1090 30 179 3.4E-32 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS00855 5a22c55d20f18030e04191659a3fa13a 179 Pfam PF00419 Fimbrial protein 33 179 1.8E-22 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS00855 5a22c55d20f18030e04191659a3fa13a 179 SUPERFAMILY SSF49401 31 179 7.46E-35 T 29-03-2018 IPR008966 Adhesion domain AM460_RS21440 10ffed3908ccad47fff879419c848d40 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 284 1.3E-108 T 29-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 AM460_RS21440 10ffed3908ccad47fff879419c848d40 284 Gene3D G3DSA:3.90.20.10 161 273 6.6E-7 T 29-03-2018 AM460_RS20725 c6d55625fedb52c15cb150a9f27856a4 684 Gene3D G3DSA:3.40.50.300 187 499 1.4E-44 T 29-03-2018 AM460_RS20725 c6d55625fedb52c15cb150a9f27856a4 684 Gene3D G3DSA:3.40.50.300 500 682 1.9E-27 T 29-03-2018 AM460_RS20725 c6d55625fedb52c15cb150a9f27856a4 684 SUPERFAMILY SSF52540 195 330 1.52E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20725 c6d55625fedb52c15cb150a9f27856a4 684 SUPERFAMILY SSF52540 385 676 1.52E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20725 c6d55625fedb52c15cb150a9f27856a4 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 8.5E-44 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM460_RS20725 c6d55625fedb52c15cb150a9f27856a4 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 2.2E-61 T 29-03-2018 IPR022161 DNA helicase IV, N-terminal domain AM460_RS20725 c6d55625fedb52c15cb150a9f27856a4 684 Pfam PF13361 UvrD-like helicase C-terminal domain 544 659 1.8E-13 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM460_RS16085 834628c6391cbb7c33fde8ac328b6104 248 Gene3D G3DSA:2.40.160.20 8 248 2.9E-14 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS16085 834628c6391cbb7c33fde8ac328b6104 248 Pfam PF06629 MltA-interacting protein MipA 28 248 4.8E-52 T 29-03-2018 IPR010583 MltA-interacting MipA AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 2.4E-115 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 SUPERFAMILY SSF46894 117 219 2.72E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 Gene3D G3DSA:1.10.10.10 126 223 2.1E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 1.8E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 SMART SM00862 143 218 4.4E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 Gene3D G3DSA:3.40.50.2300 1 125 3.8E-34 T 29-03-2018 AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 SUPERFAMILY SSF52172 1 124 3.7E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS14795 231773d1d6fd777cc5df1751e954f5d6 223 SMART SM00448 1 111 1.6E-42 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS08615 e9414db73a92c2d9ba1f673fdafb5944 619 SUPERFAMILY SSF52440 380 510 2.65E-39 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS08615 e9414db73a92c2d9ba1f673fdafb5944 619 Pfam PF05257 CHAP domain 52 149 1.0E-11 T 29-03-2018 IPR007921 CHAP domain AM460_RS08615 e9414db73a92c2d9ba1f673fdafb5944 619 SUPERFAMILY SSF54001 10 197 8.14E-61 T 29-03-2018 AM460_RS08615 e9414db73a92c2d9ba1f673fdafb5944 619 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 615 1.3E-66 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM460_RS08615 e9414db73a92c2d9ba1f673fdafb5944 619 SUPERFAMILY SSF56059 497 614 3.21E-77 T 29-03-2018 AM460_RS08615 e9414db73a92c2d9ba1f673fdafb5944 619 SUPERFAMILY SSF56059 205 379 3.21E-77 T 29-03-2018 AM460_RS18150 7b1f50fbc9eeb38883ab3222adb10ef5 296 Gene3D G3DSA:1.10.3720.10 14 285 5.1E-27 T 29-03-2018 AM460_RS18150 7b1f50fbc9eeb38883ab3222adb10ef5 296 SUPERFAMILY SSF161098 90 277 7.19E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18150 7b1f50fbc9eeb38883ab3222adb10ef5 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 1.8E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18150 7b1f50fbc9eeb38883ab3222adb10ef5 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 3.2E-9 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM460_RS16640 8ab5d21f2a559589998fcbf7642421d9 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM460_RS16640 8ab5d21f2a559589998fcbf7642421d9 406 Gene3D G3DSA:3.90.1150.10 284 401 6.1E-40 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS16640 8ab5d21f2a559589998fcbf7642421d9 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 1.4E-188 T 29-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM460_RS16640 8ab5d21f2a559589998fcbf7642421d9 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 76.844 T 29-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM460_RS16640 8ab5d21f2a559589998fcbf7642421d9 406 Gene3D G3DSA:3.40.640.10 34 283 1.1E-59 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS16640 8ab5d21f2a559589998fcbf7642421d9 406 Pfam PF00266 Aminotransferase class-V 26 394 8.2E-158 T 29-03-2018 IPR000192 Aminotransferase class V domain AM460_RS16640 8ab5d21f2a559589998fcbf7642421d9 406 SUPERFAMILY SSF53383 4 402 2.99E-129 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS20415 e111fc30e7a268fc4ec3da56d530dbdd 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS20415 e111fc30e7a268fc4ec3da56d530dbdd 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 9.5E-45 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM460_RS20415 e111fc30e7a268fc4ec3da56d530dbdd 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 64.941 T 29-03-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 AM460_RS20415 e111fc30e7a268fc4ec3da56d530dbdd 312 Gene3D G3DSA:3.40.50.720 124 278 9.3E-35 T 29-03-2018 AM460_RS20415 e111fc30e7a268fc4ec3da56d530dbdd 312 SUPERFAMILY SSF51735 99 278 3.61E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS20415 e111fc30e7a268fc4ec3da56d530dbdd 312 Gene3D G3DSA:3.40.50.720 1 123 2.9E-12 T 29-03-2018 AM460_RS24390 7975171f85c1c04c7576066af586dd33 394 SUPERFAMILY SSF103473 3 383 3.01E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS24390 7975171f85c1c04c7576066af586dd33 394 Gene3D G3DSA:1.20.1250.20 190 386 1.6E-14 T 29-03-2018 AM460_RS24390 7975171f85c1c04c7576066af586dd33 394 Pfam PF07690 Major Facilitator Superfamily 8 327 2.7E-36 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS24390 7975171f85c1c04c7576066af586dd33 394 Gene3D G3DSA:1.20.1250.20 1 189 1.4E-27 T 29-03-2018 AM460_RS21950 8e1abad70b4a316a1a77d155b82d04ef 333 Gene3D G3DSA:3.40.640.10 17 247 3.4E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS21950 8e1abad70b4a316a1a77d155b82d04ef 333 SUPERFAMILY SSF53383 1 331 2.82E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS21950 8e1abad70b4a316a1a77d155b82d04ef 333 PIRSF PIRSF017617 1 333 4.8E-130 T 29-03-2018 IPR023603 Threonine aldolase AM460_RS21950 8e1abad70b4a316a1a77d155b82d04ef 333 Gene3D G3DSA:3.90.1150.10 248 333 1.5E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS21950 8e1abad70b4a316a1a77d155b82d04ef 333 Pfam PF01212 Beta-eliminating lyase 3 282 8.1E-97 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM460_RS00045 455403653d76b6dbfa3e95e27953c1fe 134 Hamap MF_01372 UPF0412 protein YaaI [yaaI]. 1 134 40.962 T 29-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AM460_RS00045 455403653d76b6dbfa3e95e27953c1fe 134 Pfam PF10807 Protein of unknown function (DUF2541) 3 132 1.3E-64 T 29-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AM460_RS00045 455403653d76b6dbfa3e95e27953c1fe 134 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 16 134 3.0E-65 T 29-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AM460_RS14830 133454bc05f5d06d8b4466cf0039d55c 231 SMART SM00471 22 141 1.9E-9 T 29-03-2018 IPR003607 HD/PDEase domain AM460_RS14830 133454bc05f5d06d8b4466cf0039d55c 231 Pfam PF01966 HD domain 29 131 6.9E-15 T 29-03-2018 IPR006674 HD domain AM460_RS14830 133454bc05f5d06d8b4466cf0039d55c 231 Gene3D G3DSA:1.10.3210.10 3 215 1.4E-17 T 29-03-2018 AM460_RS14830 133454bc05f5d06d8b4466cf0039d55c 231 SUPERFAMILY SSF109604 1 214 6.6E-62 T 29-03-2018 AM460_RS15940 40b9b5007c45cb8548f614a6fe9be6db 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 29-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 AM460_RS15940 40b9b5007c45cb8548f614a6fe9be6db 192 Gene3D G3DSA:3.90.79.10 7 189 2.8E-41 T 29-03-2018 AM460_RS15940 40b9b5007c45cb8548f614a6fe9be6db 192 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 190 49.715 T 29-03-2018 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 AM460_RS15940 40b9b5007c45cb8548f614a6fe9be6db 192 Pfam PF00293 NUDIX domain 30 144 1.2E-14 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS15940 40b9b5007c45cb8548f614a6fe9be6db 192 SUPERFAMILY SSF55811 8 181 1.62E-34 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS16000 baa4308cec92c44ae312c56d9e35f7bc 119 SUPERFAMILY SSF51197 1 106 1.0E-34 T 29-03-2018 AM460_RS16000 baa4308cec92c44ae312c56d9e35f7bc 119 PIRSF PIRSF020632 1 119 4.6E-57 T 29-03-2018 IPR014510 Tellurite resistance predicted, YeaR AM460_RS16000 baa4308cec92c44ae312c56d9e35f7bc 119 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 7.5E-24 T 29-03-2018 IPR015392 Domain of unknown function DUF1971 AM460_RS16000 baa4308cec92c44ae312c56d9e35f7bc 119 Gene3D G3DSA:2.60.120.10 5 109 1.6E-35 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS22870 9e1bd2ac8a17f1f82a1b5482d47f6357 190 PIRSF PIRSF001296 1 190 2.3E-74 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM460_RS22870 9e1bd2ac8a17f1f82a1b5482d47f6357 190 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 188 1.2E-99 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM460_RS22870 9e1bd2ac8a17f1f82a1b5482d47f6357 190 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.223 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM460_RS22870 9e1bd2ac8a17f1f82a1b5482d47f6357 190 Pfam PF02669 K+-transporting ATPase, c chain 5 187 3.3E-68 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM460_RS23745 1105ae9baf56deaed5eed631cd2be3ab 555 Gene3D G3DSA:3.40.50.720 72 170 3.3E-6 T 29-03-2018 AM460_RS23745 1105ae9baf56deaed5eed631cd2be3ab 555 Pfam PF02629 CoA binding domain 193 287 2.9E-13 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS23745 1105ae9baf56deaed5eed631cd2be3ab 555 SUPERFAMILY SSF52210 339 493 1.13E-5 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS23745 1105ae9baf56deaed5eed631cd2be3ab 555 Gene3D G3DSA:3.40.50.261 171 511 9.1E-31 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS23745 1105ae9baf56deaed5eed631cd2be3ab 555 SUPERFAMILY SSF52210 186 317 6.28E-16 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS23745 1105ae9baf56deaed5eed631cd2be3ab 555 Pfam PF00549 CoA-ligase 336 491 3.5E-50 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 Pfam PF13353 4Fe-4S single cluster domain 35 160 6.9E-18 T 29-03-2018 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 SUPERFAMILY SSF102114 42 235 3.34E-24 T 29-03-2018 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 PIRSF PIRSF000371 63 265 2.5E-48 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 PIRSF PIRSF000371 13 66 1.1E-10 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 25 258 6.4E-108 T 29-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 ProSitePatterns PS01087 Radical activating enzymes signature. 37 58 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 Pfam PF04055 Radical SAM superfamily 43 197 1.7E-31 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS21525 88ad45dd032f9ea0890c0da7c7bb28f1 265 Gene3D G3DSA:3.80.30.10 87 265 1.3E-40 T 29-03-2018 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 332 4.3E-18 T 29-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 SUPERFAMILY SSF82649 248 335 2.62E-24 T 29-03-2018 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 1 329 2.1E-143 T 29-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 Gene3D G3DSA:3.30.930.10 2 249 6.8E-74 T 29-03-2018 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 3.7E-9 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 SUPERFAMILY SSF55681 3 247 4.23E-82 T 29-03-2018 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.672 T 29-03-2018 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 KEGG: 00785+6.3.1.20 AM460_RS00190 e83189f93b9645c423165a6ee673d1ae 338 Gene3D G3DSA:3.30.390.50 250 337 1.0E-23 T 29-03-2018 AM460_RS26410 bde5f3dd66f9fb20ac1687ffdba6bc9d 78 Gene3D G3DSA:1.10.10.10 3 65 7.0E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26410 bde5f3dd66f9fb20ac1687ffdba6bc9d 78 SMART SM00421 2 58 0.0097 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS26410 bde5f3dd66f9fb20ac1687ffdba6bc9d 78 SUPERFAMILY SSF46894 3 55 2.24E-8 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Gene3D G3DSA:3.30.70.370 657 750 7.7E-18 T 29-03-2018 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Gene3D G3DSA:3.30.70.370 754 928 1.7E-54 T 29-03-2018 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Gene3D G3DSA:3.30.420.10 321 542 9.9E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 1.7E-290 T 29-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SUPERFAMILY SSF53098 326 518 8.07E-57 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 1.6E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SUPERFAMILY SSF56672 523 928 2.78E-165 T 29-03-2018 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Gene3D G3DSA:3.40.50.1010 7 184 1.2E-68 T 29-03-2018 IPR029060 PIN domain-like AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Gene3D G3DSA:1.20.1060.10 543 656 2.4E-33 T 29-03-2018 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SUPERFAMILY SSF47807 171 291 6.13E-30 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Pfam PF01612 3'-5' exonuclease 330 516 2.1E-46 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SMART SM00474 330 517 3.1E-49 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.0E-55 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SMART SM00475 7 268 1.4E-145 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SMART SM00482 686 892 2.7E-128 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Pfam PF00476 DNA polymerase family A 551 925 9.2E-162 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 29-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SUPERFAMILY SSF88723 7 170 4.21E-57 T 29-03-2018 IPR029060 PIN domain-like AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 2.1E-30 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 Gene3D G3DSA:1.10.150.20 185 269 1.0E-24 T 29-03-2018 AM460_RS03775 284a5fb258c9ef1d620c85cddc32a91b 928 SMART SM00279 173 208 1.2E-13 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.9E-48 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.1E-57 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 SUPERFAMILY SSF54913 226 298 7.11E-22 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 29-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 Gene3D G3DSA:3.30.70.120 227 298 3.0E-25 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.028 T 29-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 Gene3D G3DSA:3.40.190.10 130 223 1.2E-23 T 29-03-2018 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 200 298 1.1E-33 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.5E-24 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 SUPERFAMILY SSF53850 6 224 3.48E-70 T 29-03-2018 AM460_RS14180 ade076102156db772f5271aaa33a8a32 299 Gene3D G3DSA:3.40.190.10 1 129 5.8E-36 T 29-03-2018 AM460_RS12730 d14dd5da27325e851eef54be193fb886 392 Gene3D G3DSA:1.20.1250.20 10 202 1.5E-18 T 29-03-2018 AM460_RS12730 d14dd5da27325e851eef54be193fb886 392 SUPERFAMILY SSF103473 14 391 3.14E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS12730 d14dd5da27325e851eef54be193fb886 392 Pfam PF07690 Major Facilitator Superfamily 20 242 4.6E-16 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS12730 d14dd5da27325e851eef54be193fb886 392 Hamap MF_01118 UPF0226 membrane protein . 1 392 30.465 T 29-03-2018 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily AM460_RS12730 d14dd5da27325e851eef54be193fb886 392 Gene3D G3DSA:1.20.1250.20 210 391 1.5E-19 T 29-03-2018 AM460_RS04575 b1fe2da16af8b1102e141ec785aa823d 241 SUPERFAMILY SSF109755 13 229 1.26E-69 T 29-03-2018 AM460_RS04575 b1fe2da16af8b1102e141ec785aa823d 241 PIRSF PIRSF003107 7 226 6.8E-67 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM460_RS04575 b1fe2da16af8b1102e141ec785aa823d 241 Gene3D G3DSA:1.20.58.220 120 240 1.6E-25 T 29-03-2018 AM460_RS04575 b1fe2da16af8b1102e141ec785aa823d 241 Gene3D G3DSA:1.20.58.220 6 119 2.3E-27 T 29-03-2018 AM460_RS04575 b1fe2da16af8b1102e141ec785aa823d 241 Pfam PF01895 PhoU domain 27 111 7.7E-20 T 29-03-2018 IPR026022 PhoU domain AM460_RS04575 b1fe2da16af8b1102e141ec785aa823d 241 Pfam PF01895 PhoU domain 128 212 1.5E-17 T 29-03-2018 IPR026022 PhoU domain AM460_RS04575 b1fe2da16af8b1102e141ec785aa823d 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.1E-71 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM460_RS13330 eaf17a19d70bdf6737b2d4eeecb94ae7 207 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS13330 eaf17a19d70bdf6737b2d4eeecb94ae7 207 SMART SM00382 28 205 2.1E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13330 eaf17a19d70bdf6737b2d4eeecb94ae7 207 Gene3D G3DSA:3.40.50.300 1 201 4.5E-42 T 29-03-2018 AM460_RS13330 eaf17a19d70bdf6737b2d4eeecb94ae7 207 SUPERFAMILY SSF52540 4 188 7.57E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13330 eaf17a19d70bdf6737b2d4eeecb94ae7 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 4 200 1.2E-86 T 29-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AM460_RS13330 eaf17a19d70bdf6737b2d4eeecb94ae7 207 Pfam PF00005 ABC transporter 21 156 2.6E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 SUPERFAMILY SSF51735 48 293 7.77E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 3.9E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 3.9E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 3.9E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 3.9E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 3.9E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 3.9E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 291 6.2E-58 T 29-03-2018 AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 186 214 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 Gene3D G3DSA:3.40.50.720 1 294 2.7E-72 T 29-03-2018 AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 6.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 6.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS08540 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 6.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18140 7ff3404bbaa3899eb9b09dfa90ddd20d 547 PIRSF PIRSF002741 1 543 2.3E-94 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS18140 7ff3404bbaa3899eb9b09dfa90ddd20d 547 Gene3D G3DSA:3.40.190.10 209 304 8.5E-24 T 29-03-2018 AM460_RS18140 7ff3404bbaa3899eb9b09dfa90ddd20d 547 SUPERFAMILY SSF53850 36 537 1.99E-133 T 29-03-2018 AM460_RS18140 7ff3404bbaa3899eb9b09dfa90ddd20d 547 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM460_RS18140 7ff3404bbaa3899eb9b09dfa90ddd20d 547 Gene3D G3DSA:3.90.76.10 45 208 4.6E-35 T 29-03-2018 AM460_RS18140 7ff3404bbaa3899eb9b09dfa90ddd20d 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 457 7.4E-84 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS18140 7ff3404bbaa3899eb9b09dfa90ddd20d 547 Gene3D G3DSA:3.10.105.10 305 510 9.1E-52 T 29-03-2018 AM460_RS04080 08db31d15a61fa8b43f3304aa9b9acd8 296 SUPERFAMILY SSF103481 42 145 1.83E-12 T 29-03-2018 AM460_RS04080 08db31d15a61fa8b43f3304aa9b9acd8 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 2.2E-118 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AM460_RS04080 08db31d15a61fa8b43f3304aa9b9acd8 296 SUPERFAMILY SSF103481 187 285 5.75E-9 T 29-03-2018 AM460_RS04080 08db31d15a61fa8b43f3304aa9b9acd8 296 Pfam PF00892 EamA-like transporter family 9 142 6.6E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS04080 08db31d15a61fa8b43f3304aa9b9acd8 296 Pfam PF00892 EamA-like transporter family 152 284 1.4E-6 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS23800 ada78dbcaa72da3e8f6f256cfd625bd4 271 SMART SM00346 21 111 4.3E-35 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS23800 ada78dbcaa72da3e8f6f256cfd625bd4 271 Pfam PF09339 IclR helix-turn-helix domain 23 73 8.9E-12 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS23800 ada78dbcaa72da3e8f6f256cfd625bd4 271 Gene3D G3DSA:3.30.450.40 90 269 7.4E-45 T 29-03-2018 IPR029016 GAF domain-like AM460_RS23800 ada78dbcaa72da3e8f6f256cfd625bd4 271 Gene3D G3DSA:1.10.10.10 6 80 3.3E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS23800 ada78dbcaa72da3e8f6f256cfd625bd4 271 Pfam PF01614 Bacterial transcriptional regulator 141 263 2.5E-41 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS23800 ada78dbcaa72da3e8f6f256cfd625bd4 271 SUPERFAMILY SSF55781 86 266 1.9E-48 T 29-03-2018 IPR029016 GAF domain-like AM460_RS23800 ada78dbcaa72da3e8f6f256cfd625bd4 271 SUPERFAMILY SSF46785 22 94 8.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09640 2590211523acc83d0fb0e70cecee629a 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 8 192 37.197 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM460_RS09640 2590211523acc83d0fb0e70cecee629a 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 178 1.3E-41 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM460_RS09640 2590211523acc83d0fb0e70cecee629a 194 SUPERFAMILY SSF101327 9 178 1.22E-54 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM460_RS09640 2590211523acc83d0fb0e70cecee629a 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 13 168 2.1E-14 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM460_RS24630 577478196a1b179379388cacf93b8967 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 2.7E-10 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS24630 577478196a1b179379388cacf93b8967 203 Pfam PF12464 Maltose acetyltransferase 8 59 5.8E-10 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM460_RS24630 577478196a1b179379388cacf93b8967 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS24630 577478196a1b179379388cacf93b8967 203 SUPERFAMILY SSF51161 5 197 8.87E-56 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS24630 577478196a1b179379388cacf93b8967 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 96 110 0.23 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS24630 577478196a1b179379388cacf93b8967 203 SMART SM01266 6 60 3.0E-14 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM460_RS24630 577478196a1b179379388cacf93b8967 203 Gene3D G3DSA:2.160.10.10 4 199 9.0E-49 T 29-03-2018 AM460_RS06665 04826ee02de2e8ea82315341ca3f5b4e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 6.1E-32 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AM460_RS06665 04826ee02de2e8ea82315341ca3f5b4e 66 Gene3D G3DSA:2.20.25.10 10 51 3.2E-5 T 29-03-2018 AM460_RS06665 04826ee02de2e8ea82315341ca3f5b4e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 54 2.6E-18 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 690 5.8E-6 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 1.8E-25 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 SUPERFAMILY SSF51735 314 495 3.58E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Gene3D G3DSA:3.40.50.720 255 495 2.7E-61 T 29-03-2018 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 SUPERFAMILY SSF48179 622 714 2.98E-23 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.5E-60 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 4.8E-37 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 SUPERFAMILY SSF52096 3 303 4.98E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Gene3D G3DSA:1.10.1040.10 503 592 3.8E-22 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Gene3D G3DSA:3.90.226.10 3 207 3.6E-53 T 29-03-2018 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.721 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 Gene3D G3DSA:1.10.1040.10 622 713 1.1E-15 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS03860 bf042d120b6215f6dcd76885f2f2b425 729 SUPERFAMILY SSF48179 495 638 3.15E-30 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS12670 fb83230949350ad47c720f89bed28956 175 Pfam PF00419 Fimbrial protein 29 174 9.7E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12670 fb83230949350ad47c720f89bed28956 175 Gene3D G3DSA:2.60.40.1090 26 175 5.1E-29 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12670 fb83230949350ad47c720f89bed28956 175 SUPERFAMILY SSF49401 27 174 7.46E-28 T 29-03-2018 IPR008966 Adhesion domain AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.1E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.1E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.1E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.1E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.1E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 Pfam PF05746 DALR anticodon binding domain 582 679 3.0E-8 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 SUPERFAMILY SSF109604 339 511 5.34E-17 T 29-03-2018 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 Gene3D G3DSA:1.10.730.10 574 683 3.5E-11 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 7.3E-216 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05465 be24b7cafc85c334fab85dc7fcafe1fc 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 27.282 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 Gene3D G3DSA:1.20.1250.20 1 196 6.9E-23 T 29-03-2018 AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 Gene3D G3DSA:1.20.1250.20 252 484 1.5E-9 T 29-03-2018 AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.36 T 29-03-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 70 94 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 SUPERFAMILY SSF103473 244 481 4.1E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 SUPERFAMILY SSF103473 8 200 4.1E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 Pfam PF00854 POT family 82 443 1.4E-98 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM460_RS05900 373a674362ef63bd0ada13a3730ebc2d 489 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 8.5E-184 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM460_RS20985 a830c29d08a1812f723f974cd464d8cb 149 Pfam PF06252 Protein of unknown function (DUF1018) 19 135 9.3E-40 T 29-03-2018 IPR009363 Bacteriophage Mu, Gp16 AM460_RS01570 71fb0af3de5455cc033c193e35591e72 116 Gene3D G3DSA:2.30.30.110 2 115 2.1E-18 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS01570 71fb0af3de5455cc033c193e35591e72 116 SUPERFAMILY SSF50118 7 114 5.45E-25 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS01570 71fb0af3de5455cc033c193e35591e72 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 113 9.7E-21 T 29-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 SUPERFAMILY SSF111369 45 102 2.09E-12 T 29-03-2018 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 Pfam PF13533 Biotin-lipoyl like 49 96 4.6E-16 T 29-03-2018 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 Gene3D G3DSA:1.10.287.470 132 197 7.9E-9 T 29-03-2018 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 Gene3D G3DSA:2.40.50.100 204 288 1.8E-4 T 29-03-2018 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 SUPERFAMILY SSF111369 182 297 1.7E-9 T 29-03-2018 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 10 340 1.1E-125 T 29-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 Pfam PF13437 HlyD family secretion protein 210 293 1.2E-12 T 29-03-2018 AM460_RS02435 f8d16177b1c875dc73be65505dd17137 343 Gene3D G3DSA:2.40.50.100 47 131 3.7E-16 T 29-03-2018 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 SUPERFAMILY SSF64518 103 545 3.01E-57 T 29-03-2018 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 355 8.0E-78 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 492 546 1.3E-7 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 Pfam PF00460 Flagella basal body rod protein 5 35 3.4E-5 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 440 459 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 513 537 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 466 487 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS20155 76e9b4d2ae4cbf3f09619c39088190ed 547 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 1.3E-152 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 SUPERFAMILY SSF53218 178 321 7.85E-44 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22180 c341819a40661522f6580ce6a9979104 411 Gene3D G3DSA:3.90.105.10 27 61 4.1E-12 T 29-03-2018 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 Gene3D G3DSA:2.40.340.10 330 402 4.4E-21 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 3.6E-34 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22180 c341819a40661522f6580ce6a9979104 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 1.9E-21 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 Gene3D G3DSA:3.40.980.10 151 325 4.7E-53 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22180 c341819a40661522f6580ce6a9979104 411 SMART SM00852 181 318 4.9E-44 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS22180 c341819a40661522f6580ce6a9979104 411 SUPERFAMILY SSF63867 328 407 3.14E-25 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 Gene3D G3DSA:2.170.190.11 62 142 1.6E-30 T 29-03-2018 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 SUPERFAMILY SSF63882 7 177 6.67E-59 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 4.7E-48 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM460_RS22180 c341819a40661522f6580ce6a9979104 411 Pfam PF00994 Probable molybdopterin binding domain 182 317 1.8E-27 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS11495 100ad01b672bb2cc33c180ab1f6f2298 127 Pfam PF01228 Glycine radical 16 108 2.1E-22 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM460_RS11495 100ad01b672bb2cc33c180ab1f6f2298 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.345 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM460_RS11495 100ad01b672bb2cc33c180ab1f6f2298 127 PIRSF PIRSF000378 2 127 4.0E-56 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM460_RS11495 100ad01b672bb2cc33c180ab1f6f2298 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM460_RS11495 100ad01b672bb2cc33c180ab1f6f2298 127 SUPERFAMILY SSF51998 64 126 3.25E-24 T 29-03-2018 AM460_RS11495 100ad01b672bb2cc33c180ab1f6f2298 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.1E-70 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM460_RS11495 100ad01b672bb2cc33c180ab1f6f2298 127 Gene3D G3DSA:3.20.70.20 54 127 5.8E-30 T 29-03-2018 AM460_RS06110 463f55eb7e4cc10812535e88f59b0507 175 SUPERFAMILY SSF55729 39 151 1.31E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS06110 463f55eb7e4cc10812535e88f59b0507 175 Pfam PF13508 Acetyltransferase (GNAT) domain 91 150 3.6E-7 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS06110 463f55eb7e4cc10812535e88f59b0507 175 Gene3D G3DSA:3.40.630.30 33 159 6.1E-12 T 29-03-2018 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 SUPERFAMILY SSF54373 181 283 6.67E-23 T 29-03-2018 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 SUPERFAMILY SSF51905 283 369 7.46E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 SUPERFAMILY SSF51905 4 183 7.46E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 Gene3D G3DSA:3.50.50.60 2 363 5.4E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 4.8E-8 T 29-03-2018 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 4.8E-8 T 29-03-2018 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.8E-8 T 29-03-2018 AM460_RS26195 24d149d3e290a8eb7ce959c6dcfe5d18 428 Pfam PF01494 FAD binding domain 7 189 4.0E-11 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM460_RS05680 d6fe31d3b35cf6400d52e38b5a4a3049 498 SUPERFAMILY SSF63411 29 239 2.79E-24 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS05680 d6fe31d3b35cf6400d52e38b5a4a3049 498 Pfam PF05193 Peptidase M16 inactive domain 201 377 1.9E-18 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM460_RS05680 d6fe31d3b35cf6400d52e38b5a4a3049 498 Gene3D G3DSA:3.30.830.10 256 471 2.7E-27 T 29-03-2018 AM460_RS05680 d6fe31d3b35cf6400d52e38b5a4a3049 498 Gene3D G3DSA:3.30.830.10 16 250 7.9E-25 T 29-03-2018 AM460_RS05680 d6fe31d3b35cf6400d52e38b5a4a3049 498 Pfam PF00675 Insulinase (Peptidase family M16) 46 164 7.8E-6 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AM460_RS05680 d6fe31d3b35cf6400d52e38b5a4a3049 498 SUPERFAMILY SSF63411 322 457 4.54E-6 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF52540 6 269 6.57E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 ProSitePatterns PS00321 recA signature. 215 223 - T 29-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.0E-173 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 129 158 4.8E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 212 240 4.8E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 299 316 4.8E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 167 196 4.8E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 245 274 4.8E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 95 124 4.8E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 Pfam PF00154 recA bacterial DNA recombination protein 9 270 6.0E-142 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.40.50.300 28 270 6.3E-47 T 29-03-2018 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 Hamap MF_00268 Protein RecA [recA]. 7 331 50.992 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF54752 272 327 4.58E-21 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 SMART SM00382 59 230 4.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS10780 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.30.250.10 272 328 3.0E-25 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM460_RS27510 66fbe2472182b1f88f0989b23f2076b0 120 Pfam PF05513 TraA 1 117 1.6E-59 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 AM460_RS27510 66fbe2472182b1f88f0989b23f2076b0 120 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 23 119 1.5E-38 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 PIRSF PIRSF002786 1 327 4.6E-92 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 Gene3D G3DSA:1.10.40.60 100 214 8.5E-32 T 29-03-2018 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 SUPERFAMILY SSF158544 215 266 2.62E-12 T 29-03-2018 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 Pfam PF03934 Type II secretion system (T2SS), protein K 34 315 3.2E-66 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 SUPERFAMILY SSF54523 285 321 1.41E-11 T 29-03-2018 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 SUPERFAMILY SSF54523 36 101 1.41E-11 T 29-03-2018 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 SUPERFAMILY SSF158544 103 212 2.14E-29 T 29-03-2018 AM460_RS06760 088a688fade7c33a7c4f55488f951626 327 Gene3D G3DSA:1.10.40.60 216 282 2.6E-19 T 29-03-2018 AM460_RS24110 ef324684b1d74c338133f880e8773885 428 Pfam PF00909 Ammonium Transporter Family 33 426 2.3E-131 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM460_RS24110 ef324684b1d74c338133f880e8773885 428 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 1.2E-139 T 29-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AM460_RS24110 ef324684b1d74c338133f880e8773885 428 Gene3D G3DSA:1.10.3430.10 23 407 4.6E-132 T 29-03-2018 AM460_RS24110 ef324684b1d74c338133f880e8773885 428 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AM460_RS24110 ef324684b1d74c338133f880e8773885 428 SUPERFAMILY SSF111352 27 407 3.14E-128 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 6.0E-27 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 PIRSF PIRSF009393 1 712 2.5E-279 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 9.8E-195 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 Gene3D G3DSA:3.90.1150.10 425 594 2.1E-54 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 Gene3D G3DSA:3.90.100.10 595 713 1.5E-34 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 SUPERFAMILY SSF55904 566 708 1.22E-41 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 Gene3D G3DSA:3.40.640.10 130 423 2.7E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.4E-45 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS25375 0ac5a2c091a3423bad3babd724d2251d 713 SUPERFAMILY SSF53383 130 562 4.71E-102 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS10555 4b89124f17c1f8854f4e51b49c10d596 183 SUPERFAMILY SSF52218 1 182 7.08E-44 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10555 4b89124f17c1f8854f4e51b49c10d596 183 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM460_RS10555 4b89124f17c1f8854f4e51b49c10d596 183 Gene3D G3DSA:3.40.50.360 1 183 5.0E-41 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10555 4b89124f17c1f8854f4e51b49c10d596 183 Pfam PF03358 NADPH-dependent FMN reductase 44 110 3.4E-9 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM460_RS04025 99823f39d05111b481453073577e24a5 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 1.2E-163 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM460_RS04025 99823f39d05111b481453073577e24a5 753 Gene3D G3DSA:3.20.20.210 386 753 1.3E-129 T 29-03-2018 AM460_RS04025 99823f39d05111b481453073577e24a5 753 PIRSF PIRSF000382 2 753 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM460_RS04025 99823f39d05111b481453073577e24a5 753 SUPERFAMILY SSF51726 391 751 7.33E-121 T 29-03-2018 AM460_RS04025 99823f39d05111b481453073577e24a5 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.586 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM460_RS04025 99823f39d05111b481453073577e24a5 753 SUPERFAMILY SSF51726 5 389 6.15E-115 T 29-03-2018 AM460_RS04025 99823f39d05111b481453073577e24a5 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 3.9E-126 T 29-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM460_RS04025 99823f39d05111b481453073577e24a5 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM460_RS04025 99823f39d05111b481453073577e24a5 753 Gene3D G3DSA:3.20.20.210 3 385 2.7E-141 T 29-03-2018 AM460_RS11240 6d824860ae564e08260bf885b989b907 1165 Pfam PF12421 Fibronectin type III protein 977 1126 5.5E-33 T 29-03-2018 IPR021034 Domain of unknown function, DUF3672 AM460_RS11240 6d824860ae564e08260bf885b989b907 1165 Gene3D G3DSA:2.60.40.10 614 806 5.3E-15 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS11240 6d824860ae564e08260bf885b989b907 1165 SMART SM00060 714 798 55.0 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM460_RS11240 6d824860ae564e08260bf885b989b907 1165 SMART SM00060 618 701 0.2 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM460_RS11240 6d824860ae564e08260bf885b989b907 1165 Pfam PF09327 Domain of unknown function (DUF1983) 873 953 2.9E-22 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 AM460_RS11240 6d824860ae564e08260bf885b989b907 1165 Pfam PF13550 Putative phage tail protein 330 497 4.3E-41 T 29-03-2018 IPR032876 Tip attachment protein J AM460_RS11240 6d824860ae564e08260bf885b989b907 1165 SUPERFAMILY SSF49265 617 719 7.38E-6 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM460_RS13285 f9b13f66f89f0cdadc7c83f3fae071d1 162 PIRSF PIRSF006865 1 162 1.3E-65 T 29-03-2018 IPR005658 Proteinase inhibitor I11, ecotin AM460_RS13285 f9b13f66f89f0cdadc7c83f3fae071d1 162 Gene3D G3DSA:2.60.40.550 27 99 3.2E-36 T 29-03-2018 AM460_RS13285 f9b13f66f89f0cdadc7c83f3fae071d1 162 Gene3D G3DSA:4.10.1230.10 105 159 2.0E-28 T 29-03-2018 IPR027438 Ecotin, C-terminal AM460_RS13285 f9b13f66f89f0cdadc7c83f3fae071d1 162 Pfam PF03974 Ecotin 30 152 1.2E-52 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain AM460_RS13285 f9b13f66f89f0cdadc7c83f3fae071d1 162 SUPERFAMILY SSF49772 26 160 1.01E-57 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain AM460_RS13285 f9b13f66f89f0cdadc7c83f3fae071d1 162 Hamap MF_00706 Ecotin [eco]. 1 162 42.126 T 29-03-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 SUPERFAMILY SSF55190 2 100 1.83E-23 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 7.7E-22 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 SMART SM00836 460 577 1.1E-36 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 2.1E-219 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 SUPERFAMILY SSF47323 454 577 3.14E-35 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 SUPERFAMILY SSF52374 110 454 5.0E-99 T 29-03-2018 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 Pfam PF00750 tRNA synthetases class I (R) 95 446 1.1E-179 T 29-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 Gene3D G3DSA:3.40.50.620 107 440 3.9E-61 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 Gene3D G3DSA:3.30.1360.70 1 106 5.9E-30 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 Pfam PF05746 DALR anticodon binding domain 460 577 2.5E-35 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 Gene3D G3DSA:1.10.730.10 441 577 2.2E-44 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 SMART SM01016 5 87 7.8E-29 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS15585 141067eb01917baa2275c3a9f07779e7 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.613 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM460_RS23195 e1cf7bcdabbdf66cf859974522a5a4b9 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 4.2E-46 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS23195 e1cf7bcdabbdf66cf859974522a5a4b9 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.079 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS23195 e1cf7bcdabbdf66cf859974522a5a4b9 155 SUPERFAMILY SSF75217 2 153 3.51E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS23195 e1cf7bcdabbdf66cf859974522a5a4b9 155 PIRSF PIRSF004505 1 154 7.5E-40 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS23195 e1cf7bcdabbdf66cf859974522a5a4b9 155 Gene3D G3DSA:3.40.1280.10 2 154 6.4E-49 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS23195 e1cf7bcdabbdf66cf859974522a5a4b9 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 1.7E-87 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS11610 253ad9996f95a62d156c78d85e256eb3 178 SUPERFAMILY SSF53927 16 168 6.19E-59 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM460_RS11610 253ad9996f95a62d156c78d85e256eb3 178 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 49.583 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM460_RS11610 253ad9996f95a62d156c78d85e256eb3 178 Pfam PF14437 MafB19-like deaminase 19 164 3.8E-33 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM460_RS11610 253ad9996f95a62d156c78d85e256eb3 178 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM460_RS11610 253ad9996f95a62d156c78d85e256eb3 178 Gene3D G3DSA:3.40.140.10 13 174 1.7E-51 T 29-03-2018 AM460_RS18095 8cd0afdf4a02d4527a397ca1fe1941fc 104 Pfam PF00581 Rhodanese-like domain 22 93 3.7E-12 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS18095 8cd0afdf4a02d4527a397ca1fe1941fc 104 Gene3D G3DSA:3.40.250.10 20 104 1.1E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS18095 8cd0afdf4a02d4527a397ca1fe1941fc 104 SMART SM00450 7 103 1.7E-13 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS18095 8cd0afdf4a02d4527a397ca1fe1941fc 104 SUPERFAMILY SSF52821 23 93 3.4E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS18095 8cd0afdf4a02d4527a397ca1fe1941fc 104 TIGRFAM TIGR02981 phageshock_pspE: phage shock operon rhodanese PspE 3 103 1.1E-63 T 29-03-2018 IPR014323 Phage shock protein, PspE KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM460_RS12340 fbe5ec34b1a147ba0f79f3e36cbefaca 130 Gene3D G3DSA:1.10.10.10 22 62 2.3E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12340 fbe5ec34b1a147ba0f79f3e36cbefaca 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 129 6.5E-55 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 AM460_RS12340 fbe5ec34b1a147ba0f79f3e36cbefaca 130 Gene3D G3DSA:1.10.10.10 1 21 3.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12340 fbe5ec34b1a147ba0f79f3e36cbefaca 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 129 7.0E-58 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 AM460_RS12340 fbe5ec34b1a147ba0f79f3e36cbefaca 130 SUPERFAMILY SSF46955 5 82 1.83E-13 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS20555 2ffb8ef9f5b5948bb47a6ae5afebc930 413 Gene3D G3DSA:3.40.50.1240 53 84 0.3 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS20555 2ffb8ef9f5b5948bb47a6ae5afebc930 413 Gene3D G3DSA:3.40.50.1240 137 272 1.6E-48 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS20555 2ffb8ef9f5b5948bb47a6ae5afebc930 413 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site AM460_RS20555 2ffb8ef9f5b5948bb47a6ae5afebc930 413 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 363 4.9E-16 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AM460_RS20555 2ffb8ef9f5b5948bb47a6ae5afebc930 413 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 305 321 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site AM460_RS20555 2ffb8ef9f5b5948bb47a6ae5afebc930 413 SUPERFAMILY SSF53254 24 411 2.42E-78 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 SUPERFAMILY SSF47005 90 128 2.75E-9 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 Gene3D G3DSA:3.30.559.10 139 382 8.5E-90 T 29-03-2018 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 SUPERFAMILY SSF51230 1 78 3.27E-24 T 29-03-2018 IPR011053 Single hybrid motif AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 SUPERFAMILY SSF52777 154 383 3.96E-87 T 29-03-2018 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 Pfam PF00364 Biotin-requiring enzyme 3 75 1.2E-19 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 Gene3D G3DSA:2.40.50.100 1 80 3.1E-16 T 29-03-2018 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 Gene3D G3DSA:4.10.320.10 89 138 1.0E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 2 383 1.4E-156 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 154 382 9.7E-81 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS02680 5c76147a1f8fd9ac651012e6c0d871c2 384 Pfam PF02817 e3 binding domain 92 126 2.2E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM460_RS04985 67a34ce03b265acf8842a8c3cbc410ae 401 Pfam PF03616 Sodium/glutamate symporter 2 366 1.0E-164 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM460_RS04985 67a34ce03b265acf8842a8c3cbc410ae 401 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.87 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM460_RS04985 67a34ce03b265acf8842a8c3cbc410ae 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 2.2E-205 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 SUPERFAMILY SSF111369 113 170 1.96E-5 T 29-03-2018 AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 50.673 T 29-03-2018 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 Gene3D G3DSA:1.10.287.470 111 170 1.2E-12 T 29-03-2018 AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 Gene3D G3DSA:1.20.1600.10 175 309 6.6E-19 T 29-03-2018 AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 SUPERFAMILY SSF111369 42 99 8.89E-9 T 29-03-2018 AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 Gene3D G3DSA:2.40.50.100 43 107 1.7E-15 T 29-03-2018 AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 319 4.7E-18 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS22345 609a06ed01466289e7bfc20a0a1fd990 332 SUPERFAMILY SSF111369 177 324 4.84E-13 T 29-03-2018 AM460_RS00060 399d90227132f252720a0249ce69397b 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 7.2E-28 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS00060 399d90227132f252720a0249ce69397b 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 2.2E-40 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS00060 399d90227132f252720a0249ce69397b 195 Gene3D G3DSA:3.40.980.10 1 188 2.1E-40 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS00060 399d90227132f252720a0249ce69397b 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM460_RS00060 399d90227132f252720a0249ce69397b 195 SUPERFAMILY SSF53218 3 188 3.66E-49 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS00060 399d90227132f252720a0249ce69397b 195 SMART SM00852 7 153 1.0E-22 T 29-03-2018 IPR001453 MoaB/Mog domain AM460_RS09605 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.40.50.1360 1 137 2.1E-39 T 29-03-2018 AM460_RS09605 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.30.70.260 138 196 5.1E-24 T 29-03-2018 AM460_RS09605 98822156c91c8e151fc394de8e11cfce 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 3.2E-59 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS09605 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF100950 2 146 1.86E-46 T 29-03-2018 AM460_RS09605 98822156c91c8e151fc394de8e11cfce 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.5E-72 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS09605 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF75445 127 198 2.75E-24 T 29-03-2018 AM460_RS09605 98822156c91c8e151fc394de8e11cfce 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.72 T 29-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM460_RS17680 0ca5cab07b7d4ebdaaeccae6b5816ef9 381 Gene3D G3DSA:3.40.190.10 38 157 1.4E-18 T 29-03-2018 AM460_RS17680 0ca5cab07b7d4ebdaaeccae6b5816ef9 381 Gene3D G3DSA:3.40.190.10 158 327 2.9E-29 T 29-03-2018 AM460_RS17680 0ca5cab07b7d4ebdaaeccae6b5816ef9 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 326 3.0E-25 T 29-03-2018 AM460_RS17680 0ca5cab07b7d4ebdaaeccae6b5816ef9 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 1.9E-6 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS17680 0ca5cab07b7d4ebdaaeccae6b5816ef9 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 1.9E-6 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS17680 0ca5cab07b7d4ebdaaeccae6b5816ef9 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 1.9E-6 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS17680 0ca5cab07b7d4ebdaaeccae6b5816ef9 381 SUPERFAMILY SSF53850 33 357 4.3E-55 T 29-03-2018 AM460_RS25670 04b2a5759b1b68414961e8f8d48ed574 306 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 304 3.7E-81 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM460_RS25670 04b2a5759b1b68414961e8f8d48ed574 306 Gene3D G3DSA:1.10.10.60 249 306 4.4E-6 T 29-03-2018 AM460_RS25670 04b2a5759b1b68414961e8f8d48ed574 306 Pfam PF04754 Putative transposase, YhgA-like 7 207 1.9E-85 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like AM460_RS20545 0deac7eed1b56ac93421d54513714945 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 41.307 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM460_RS20545 0deac7eed1b56ac93421d54513714945 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 7.9E-106 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM460_RS20545 0deac7eed1b56ac93421d54513714945 198 Pfam PF03358 NADPH-dependent FMN reductase 13 143 6.1E-14 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM460_RS20545 0deac7eed1b56ac93421d54513714945 198 SUPERFAMILY SSF52218 1 197 1.3E-62 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS20545 0deac7eed1b56ac93421d54513714945 198 Gene3D G3DSA:3.40.50.360 2 198 1.6E-52 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS03435 d08945678e24c1ed1ad25fc20c27125f 81 Hamap MF_01196 Cell division protein ZapB [zapB]. 3 81 18.505 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AM460_RS03435 d08945678e24c1ed1ad25fc20c27125f 81 Pfam PF06005 Cell division protein ZapB 3 80 1.1E-24 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AM460_RS03435 d08945678e24c1ed1ad25fc20c27125f 81 Gene3D G3DSA:1.20.5.370 49 81 1.1E-9 T 29-03-2018 AM460_RS03435 d08945678e24c1ed1ad25fc20c27125f 81 Gene3D G3DSA:1.20.5.370 15 48 4.7E-13 T 29-03-2018 AM460_RS02395 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Gene3D G3DSA:1.10.10.10 16 109 1.3E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02395 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Gene3D G3DSA:3.40.50.10490 110 285 9.8E-34 T 29-03-2018 AM460_RS02395 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Pfam PF01380 SIS domain 138 266 2.6E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS02395 d3aabd2bfef2d44bcfe52a4c266a95fb 296 SUPERFAMILY SSF53697 104 288 1.7E-40 T 29-03-2018 AM460_RS02395 d3aabd2bfef2d44bcfe52a4c266a95fb 296 SUPERFAMILY SSF46689 17 89 6.09E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS02395 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 90 9.1E-27 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM460_RS00050 052f9b9bbc7cdbd64f60bf0e732b9d84 237 Pfam PF13099 Domain of unknown function (DUF3944) 5 39 3.8E-15 T 29-03-2018 IPR025217 Domain of unknown function DUF3944 AM460_RS00050 052f9b9bbc7cdbd64f60bf0e732b9d84 237 Pfam PF03981 Ubiquinol-cytochrome C chaperone 59 220 3.8E-23 T 29-03-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AM460_RS19765 29bfbca489bfde50f49b2080c71fd8b5 151 Gene3D G3DSA:1.10.3790.10 9 151 6.8E-31 T 29-03-2018 IPR008711 Recombinase NinB AM460_RS19765 29bfbca489bfde50f49b2080c71fd8b5 151 SUPERFAMILY SSF103370 37 134 4.58E-7 T 29-03-2018 IPR008711 Recombinase NinB AM460_RS19765 29bfbca489bfde50f49b2080c71fd8b5 151 ProDom PD033929 YBCN ECS1616 SIMILAR 5'REGION ORF151 RUSA LAMBDOID DLP12 BACTERIOPHAGE PROPHAGE 11 150 5.0E-77 T 29-03-2018 AM460_RS19765 29bfbca489bfde50f49b2080c71fd8b5 151 Pfam PF05772 NinB protein 35 133 2.4E-5 T 29-03-2018 IPR008711 Recombinase NinB AM460_RS16115 f772e593cff46d25d33e0202ee71ff0c 358 Gene3D G3DSA:3.40.50.10730 169 319 4.7E-25 T 29-03-2018 AM460_RS16115 f772e593cff46d25d33e0202ee71ff0c 358 SUPERFAMILY SSF50129 3 184 2.67E-37 T 29-03-2018 IPR011032 GroES-like AM460_RS16115 f772e593cff46d25d33e0202ee71ff0c 358 Pfam PF00107 Zinc-binding dehydrogenase 185 316 3.7E-28 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS16115 f772e593cff46d25d33e0202ee71ff0c 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 132 2.6E-25 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS16115 f772e593cff46d25d33e0202ee71ff0c 358 SUPERFAMILY SSF51735 147 321 4.76E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16115 f772e593cff46d25d33e0202ee71ff0c 358 Gene3D G3DSA:3.90.180.10 1 168 5.0E-35 T 29-03-2018 AM460_RS16115 f772e593cff46d25d33e0202ee71ff0c 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS25900 bf027aecde1ae723b927b94a26fa4936 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 2.6E-164 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS25900 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.230.20 1 128 3.5E-48 T 29-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS25900 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 134 278 3.34E-54 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS25900 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 3 124 1.29E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS25900 bf027aecde1ae723b927b94a26fa4936 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.002 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS25900 bf027aecde1ae723b927b94a26fa4936 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 9.6E-109 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS25900 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.1700.10 129 299 3.9E-70 T 29-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM460_RS12240 eee28c230b565de59322e7a02f56dcc3 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.0E-51 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS12240 eee28c230b565de59322e7a02f56dcc3 169 Gene3D G3DSA:2.70.70.10 9 169 1.5E-58 T 29-03-2018 AM460_RS12240 eee28c230b565de59322e7a02f56dcc3 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS12240 eee28c230b565de59322e7a02f56dcc3 169 SUPERFAMILY SSF51261 12 167 4.36E-56 T 29-03-2018 IPR011055 Duplicated hybrid motif AM460_RS12240 eee28c230b565de59322e7a02f56dcc3 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 5.2E-49 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM460_RS05125 048ff244b81a4ed04360a09c10067027 232 Gene3D G3DSA:3.90.1200.10 8 180 4.5E-5 T 29-03-2018 AM460_RS05125 048ff244b81a4ed04360a09c10067027 232 SUPERFAMILY SSF56112 24 71 1.93E-9 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS05125 048ff244b81a4ed04360a09c10067027 232 SUPERFAMILY SSF56112 116 180 1.93E-9 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS05125 048ff244b81a4ed04360a09c10067027 232 Pfam PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) 1 229 2.8E-133 T 29-03-2018 IPR009330 Lipopolysaccharide core heptose(II) kinase AM460_RS01585 5ba46d964f4e5452459a98e19f9d6248 1259 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 923 1259 1.4E-69 T 29-03-2018 IPR007452 Translocation and assembly module TamB AM460_RS19750 476b3b755259b96491fcf20318b3e949 120 SUPERFAMILY SSF103084 6 117 1.11E-36 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS19750 476b3b755259b96491fcf20318b3e949 120 Gene3D G3DSA:3.30.1330.70 1 120 1.6E-30 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS19750 476b3b755259b96491fcf20318b3e949 120 PIRSF PIRSF001007 1 120 4.9E-50 T 29-03-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 AM460_RS19750 476b3b755259b96491fcf20318b3e949 120 Pfam PF05866 Endodeoxyribonuclease RusA 9 114 3.5E-22 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS03065 238420bc15314322d0fb91ff720771c0 257 Gene3D G3DSA:3.90.79.10 126 257 1.1E-35 T 29-03-2018 AM460_RS03065 238420bc15314322d0fb91ff720771c0 257 SUPERFAMILY SSF55811 3 96 1.32E-31 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS03065 238420bc15314322d0fb91ff720771c0 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS03065 238420bc15314322d0fb91ff720771c0 257 SUPERFAMILY SSF55811 79 241 1.16E-40 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS03065 238420bc15314322d0fb91ff720771c0 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 5.0E-10 T 29-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM460_RS03065 238420bc15314322d0fb91ff720771c0 257 Pfam PF00293 NUDIX domain 132 234 1.0E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS03065 238420bc15314322d0fb91ff720771c0 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 48.044 T 29-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM460_RS15825 76e55d6e7d9d94e168f1eed7a108616e 232 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 231 30.415 T 29-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AM460_RS15825 76e55d6e7d9d94e168f1eed7a108616e 232 Pfam PF17516 ProQ C-terminal domain 182 232 2.2E-24 T 29-03-2018 IPR035236 RNA chaperone ProQ, C-terminal AM460_RS15825 76e55d6e7d9d94e168f1eed7a108616e 232 Gene3D G3DSA:1.10.1710.10 1 121 1.6E-40 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS15825 76e55d6e7d9d94e168f1eed7a108616e 232 SMART SM00945 5 119 5.1E-60 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS15825 76e55d6e7d9d94e168f1eed7a108616e 232 Pfam PF04352 ProQ/FINO family 8 115 1.8E-42 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS15825 76e55d6e7d9d94e168f1eed7a108616e 232 SUPERFAMILY SSF48657 5 119 8.89E-40 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 SUPERFAMILY SSF47823 6 98 2.16E-11 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Pfam PF00589 Phage integrase family 113 280 1.5E-52 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Gene3D G3DSA:1.10.443.10 113 288 1.8E-43 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 SUPERFAMILY SSF56349 107 292 2.85E-54 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 9 296 2.9E-111 T 29-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Gene3D G3DSA:1.10.150.130 2 112 4.8E-22 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 294 58.633 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AM460_RS04120 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 2.3E-26 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM460_RS08160 d39582be601fe17aae346654abca9d25 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 482 1.7E-168 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS08160 d39582be601fe17aae346654abca9d25 487 PIRSF PIRSF002457 2 487 1.4E-132 T 29-03-2018 IPR030676 Citrate carrier CitT-related AM460_RS08160 d39582be601fe17aae346654abca9d25 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 486 8.4E-186 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS11010 10984ea2be86f5f96a4a9435351429b9 391 SUPERFAMILY SSF56349 91 373 6.77E-49 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS11010 10984ea2be86f5f96a4a9435351429b9 391 Gene3D G3DSA:1.10.443.10 198 391 1.6E-30 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS11010 10984ea2be86f5f96a4a9435351429b9 391 Gene3D G3DSA:1.10.150.130 86 196 3.7E-14 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS11010 10984ea2be86f5f96a4a9435351429b9 391 Pfam PF12167 Arm DNA-binding domain 10 77 5.8E-22 T 29-03-2018 IPR022000 Min27-like integrase, DNA-binding domain AM460_RS11010 10984ea2be86f5f96a4a9435351429b9 391 Pfam PF00589 Phage integrase family 202 370 1.6E-16 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS12095 b19944c5b86bebc641af396f14376889 338 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 319 2.3E-99 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12095 b19944c5b86bebc641af396f14376889 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 2 320 2.4E-123 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12095 b19944c5b86bebc641af396f14376889 338 Gene3D G3DSA:3.40.50.10750 140 296 4.8E-58 T 29-03-2018 AM460_RS12095 b19944c5b86bebc641af396f14376889 338 PIRSF PIRSF000428 1 326 1.2E-109 T 29-03-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12095 b19944c5b86bebc641af396f14376889 338 Gene3D G3DSA:3.40.50.2300 5 93 0.002 T 29-03-2018 AM460_RS12095 b19944c5b86bebc641af396f14376889 338 SUPERFAMILY SSF53659 2 321 1.11E-82 T 29-03-2018 AM460_RS28120 49932bcf7637021ce586b0ca35ea714e 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 67 3.8E-14 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM460_RS28120 49932bcf7637021ce586b0ca35ea714e 73 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 37 61 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM460_RS28120 49932bcf7637021ce586b0ca35ea714e 73 PRINTS PR00618 DksA/TraR zinc finger signature 37 48 1.9E-6 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS28120 49932bcf7637021ce586b0ca35ea714e 73 PRINTS PR00618 DksA/TraR zinc finger signature 49 61 1.9E-6 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS28120 49932bcf7637021ce586b0ca35ea714e 73 SUPERFAMILY SSF57716 36 72 5.56E-9 T 29-03-2018 AM460_RS28120 49932bcf7637021ce586b0ca35ea714e 73 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 66 3.4E-23 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 Gene3D G3DSA:1.10.10.10 2 18 0.031 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.1E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 9.1E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 SMART SM00354 2 72 4.0E-33 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 SUPERFAMILY SSF47413 2 57 1.75E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 SUPERFAMILY SSF53822 75 325 4.04E-60 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 Gene3D G3DSA:1.10.260.40 19 54 1.5E-22 T 29-03-2018 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.9E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 29-03-2018 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 77 323 2.6E-24 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 Gene3D G3DSA:3.40.50.2300 55 183 2.3E-24 T 29-03-2018 AM460_RS18035 668a750b3c94fd2254033911ff11723d 332 Gene3D G3DSA:3.40.50.2300 184 325 3.2E-33 T 29-03-2018 AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 2.2E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 SUPERFAMILY SSF56784 7 216 6.43E-48 T 29-03-2018 IPR023214 HAD-like domain AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 7.8E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 7.8E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 7.8E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 Gene3D G3DSA:1.10.150.240 33 81 1.2E-19 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 Gene3D G3DSA:3.40.50.1000 82 217 1.0E-25 T 29-03-2018 IPR023214 HAD-like domain AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 4.2E-22 T 29-03-2018 IPR023214 HAD-like domain AM460_RS16375 0ada40492a8e217bf2a543a0b8382041 222 Gene3D G3DSA:3.40.50.1000 3 32 0.089 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22940 c9401a35126a5495c325dacdfeb67445 468 Gene3D G3DSA:2.40.160.10 2 468 3.6E-95 T 29-03-2018 AM460_RS22940 c9401a35126a5495c325dacdfeb67445 468 Pfam PF03573 outer membrane porin, OprD family 33 430 1.5E-25 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM460_RS09700 6770654d95b813a48e58ffb9abafe1e6 135 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 1.0E-55 T 29-03-2018 IPR009883 Inner membrane protein YgfX AM460_RS09700 6770654d95b813a48e58ffb9abafe1e6 135 PIRSF PIRSF020653 1 135 2.4E-78 T 29-03-2018 IPR009883 Inner membrane protein YgfX AM460_RS09700 6770654d95b813a48e58ffb9abafe1e6 135 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 131 8.0E-58 T 29-03-2018 IPR009883 Inner membrane protein YgfX AM460_RS27460 8950954bea5b905adda0d91a58fc2f5a 181 Gene3D G3DSA:3.40.30.10 36 181 8.5E-11 T 29-03-2018 AM460_RS27460 8950954bea5b905adda0d91a58fc2f5a 181 SUPERFAMILY SSF52833 46 168 2.43E-11 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS27460 8950954bea5b905adda0d91a58fc2f5a 181 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 9 171 1.9E-63 T 29-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB AM460_RS27460 8950954bea5b905adda0d91a58fc2f5a 181 Pfam PF13728 F plasmid transfer operon protein 71 158 2.1E-12 T 29-03-2018 AM460_RS05095 d3c14c0ccb14eb26ba8b089a1adb328b 374 Gene3D G3DSA:3.40.50.2000 183 355 3.9E-36 T 29-03-2018 AM460_RS05095 d3c14c0ccb14eb26ba8b089a1adb328b 374 Gene3D G3DSA:3.40.50.2000 2 182 6.4E-6 T 29-03-2018 AM460_RS05095 d3c14c0ccb14eb26ba8b089a1adb328b 374 SUPERFAMILY SSF53756 3 354 1.26E-62 T 29-03-2018 AM460_RS05095 d3c14c0ccb14eb26ba8b089a1adb328b 374 Pfam PF00534 Glycosyl transferases group 1 183 350 2.3E-37 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM460_RS05095 d3c14c0ccb14eb26ba8b089a1adb328b 374 Pfam PF13439 Glycosyltransferase Family 4 13 173 2.3E-8 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM460_RS18610 cb250945dca728979a84842c28272543 617 Pfam PF08410 Domain of unknown function (DUF1737) 3 49 5.1E-14 T 29-03-2018 IPR013619 Domain of unknown function DUF1737 AM460_RS18610 cb250945dca728979a84842c28272543 617 Gene3D G3DSA:3.40.50.1110 63 389 2.5E-33 T 29-03-2018 AM460_RS18610 cb250945dca728979a84842c28272543 617 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 66 262 6.7E-13 T 29-03-2018 IPR005181 Sialate O-acetylesterase domain AM460_RS18610 cb250945dca728979a84842c28272543 617 SUPERFAMILY SSF52266 355 446 4.12E-42 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS18610 cb250945dca728979a84842c28272543 617 SUPERFAMILY SSF52266 63 321 4.12E-42 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 SUPERFAMILY SSF48179 241 366 2.04E-42 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 SMART SM00830 9 89 2.9E-30 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.3E-46 T 29-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 Gene3D G3DSA:1.20.59.10 3 83 8.2E-24 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 PIRSF PIRSF001499 1 373 2.3E-186 T 29-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 Pfam PF01817 Chorismate mutase type II 9 86 1.3E-19 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 SUPERFAMILY SSF51735 91 238 3.07E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 SUPERFAMILY SSF48600 4 88 4.03E-23 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 Gene3D G3DSA:1.10.3660.10 249 372 2.9E-33 T 29-03-2018 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 Pfam PF02153 Prephenate dehydrogenase 137 344 3.3E-31 T 29-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AM460_RS11380 4cddf1b335438161ef2ebd9765a7e060 373 Gene3D G3DSA:3.40.50.720 84 247 3.6E-26 T 29-03-2018 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 Gene3D G3DSA:3.30.930.10 105 430 2.0E-96 T 29-03-2018 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 2.1E-185 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 PIRSF PIRSF001529 1 430 7.7E-186 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 SUPERFAMILY SSF55681 116 424 1.11E-99 T 29-03-2018 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.6E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.6E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.6E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.6E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.6E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 8.9E-36 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.1E-34 T 29-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 Gene3D G3DSA:1.10.287.40 2 104 5.1E-27 T 29-03-2018 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.817 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM460_RS21820 5428c38a6a43a1cd085e19ad69956708 430 SUPERFAMILY SSF46589 1 112 1.41E-32 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM460_RS17970 716e68a97fbca16b35ec7ff2a5d22076 316 SUPERFAMILY SSF52402 4 153 7.03E-26 T 29-03-2018 AM460_RS17970 716e68a97fbca16b35ec7ff2a5d22076 316 Pfam PF00582 Universal stress protein family 174 300 5.2E-15 T 29-03-2018 IPR006016 UspA GO:0006950 AM460_RS17970 716e68a97fbca16b35ec7ff2a5d22076 316 Pfam PF00582 Universal stress protein family 3 146 1.6E-18 T 29-03-2018 IPR006016 UspA GO:0006950 AM460_RS17970 716e68a97fbca16b35ec7ff2a5d22076 316 Gene3D G3DSA:3.40.50.620 154 304 6.5E-24 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS17970 716e68a97fbca16b35ec7ff2a5d22076 316 Gene3D G3DSA:3.40.50.620 1 152 4.4E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS17970 716e68a97fbca16b35ec7ff2a5d22076 316 SUPERFAMILY SSF52402 155 307 5.86E-25 T 29-03-2018 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 SUPERFAMILY SSF53807 27 308 1.91E-74 T 29-03-2018 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 Gene3D G3DSA:3.40.50.1980 190 308 2.9E-25 T 29-03-2018 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 Gene3D G3DSA:3.40.50.1980 27 189 2.4E-46 T 29-03-2018 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 306 1.5E-57 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 249 267 4.4E-8 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 69 86 4.4E-8 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 56 69 4.4E-8 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS15695 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 196 217 4.4E-8 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 Pfam PF01578 Cytochrome C assembly protein 9 184 1.3E-32 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 2.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13340 52d600117bf082e96ae04e08322dab02 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 4.9E-85 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS07140 4c780231a72ff56d67ca07f7c6c92e89 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 1.3E-115 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS07140 4c780231a72ff56d67ca07f7c6c92e89 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS07140 4c780231a72ff56d67ca07f7c6c92e89 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS07140 4c780231a72ff56d67ca07f7c6c92e89 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 1.1E-228 T 29-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 AM460_RS07140 4c780231a72ff56d67ca07f7c6c92e89 483 Pfam PF00474 Sodium:solute symporter family 36 432 1.4E-142 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 Pfam PF00085 Thioredoxin 5 106 2.0E-34 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 SUPERFAMILY SSF52833 2 108 1.04E-41 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS04290 850143d49315e8891aad60bd107000ef 109 Gene3D G3DSA:3.40.30.10 1 109 6.2E-36 T 29-03-2018 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 29-03-2018 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 29-03-2018 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 29-03-2018 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.1E-39 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM460_RS04290 850143d49315e8891aad60bd107000ef 109 PIRSF PIRSF000077 2 108 1.7E-45 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 Pfam PF00771 FHIPEP family 26 688 1.4E-241 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 237 251 9.9E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 186 203 9.9E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 137 153 9.9E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 9.9E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 9.9E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 156 174 9.9E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 142 165 - T 29-03-2018 IPR025505 FHIPEP conserved site AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 695 9.5E-234 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AM460_RS25170 9e62e74524dd1bf2c79a0a264eaf9cf0 697 PIRSF PIRSF005419 1 697 1.4E-223 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM460_RS08890 4e087a3f159031022fc3970844594483 290 SUPERFAMILY SSF52540 25 246 1.14E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS08890 4e087a3f159031022fc3970844594483 290 Pfam PF01926 50S ribosome-binding GTPase 39 133 1.5E-13 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS08890 4e087a3f159031022fc3970844594483 290 Gene3D G3DSA:3.40.50.300 5 46 1.5E-4 T 29-03-2018 AM460_RS08890 4e087a3f159031022fc3970844594483 290 Gene3D G3DSA:3.40.50.300 47 251 1.2E-27 T 29-03-2018 AM460_RS20405 33ddad67eb91298cd65bde74be7d1547 184 PIRSF PIRSF004690 1 184 1.5E-58 T 29-03-2018 IPR026269 Tat proofreading chaperone DmsD-type AM460_RS20405 33ddad67eb91298cd65bde74be7d1547 184 SUPERFAMILY SSF89155 2 180 3.79E-45 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS20405 33ddad67eb91298cd65bde74be7d1547 184 Pfam PF02613 Nitrate reductase delta subunit 35 147 1.1E-14 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS20405 33ddad67eb91298cd65bde74be7d1547 184 Gene3D G3DSA:1.10.3480.10 1 184 6.3E-36 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS02025 8a819b1319a310a32369306016a392b8 188 SMART SM00841 131 186 6.9E-33 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 PIRSF PIRSF005901 2 188 1.2E-66 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP AM460_RS02025 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.30.30.30 4 63 3.2E-24 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 70 128 2.31E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS02025 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 67 129 5.7E-25 T 29-03-2018 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 SMART SM01185 69 123 1.6E-26 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AM460_RS02025 8a819b1319a310a32369306016a392b8 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.5E-76 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 130 187 1.2E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS02025 8a819b1319a310a32369306016a392b8 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.4E-23 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like AM460_RS02025 8a819b1319a310a32369306016a392b8 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 1.0E-22 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50104 3 63 2.35E-17 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM460_RS02025 8a819b1319a310a32369306016a392b8 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.3E-26 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.871 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM460_RS02025 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 131 186 1.4E-27 T 29-03-2018 AM460_RS06190 48baee44466f254a818f3806b6b97a98 345 Gene3D G3DSA:3.30.360.10 135 338 2.1E-30 T 29-03-2018 AM460_RS06190 48baee44466f254a818f3806b6b97a98 345 SUPERFAMILY SSF55347 130 271 1.46E-20 T 29-03-2018 AM460_RS06190 48baee44466f254a818f3806b6b97a98 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 8.1E-28 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM460_RS06190 48baee44466f254a818f3806b6b97a98 345 Gene3D G3DSA:3.40.50.720 2 134 2.0E-32 T 29-03-2018 AM460_RS06190 48baee44466f254a818f3806b6b97a98 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 4.3E-16 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM460_RS06190 48baee44466f254a818f3806b6b97a98 345 SUPERFAMILY SSF51735 3 158 1.4E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.6E-31 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.2E-28 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 Gene3D G3DSA:3.30.1340.10 1 85 2.8E-32 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 SUPERFAMILY SSF55594 1 82 1.44E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS12250 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM460_RS09885 d4ee2137583183f3517e38b55e044e06 278 SUPERFAMILY SSF51182 2 262 1.04E-109 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS09885 d4ee2137583183f3517e38b55e044e06 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 57.033 T 29-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM460_RS09885 d4ee2137583183f3517e38b55e044e06 278 PIRSF PIRSF006625 1 278 7.9E-135 T 29-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM460_RS09885 d4ee2137583183f3517e38b55e044e06 278 Pfam PF04962 KduI/IolB family 32 273 4.9E-42 T 29-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM460_RS09885 d4ee2137583183f3517e38b55e044e06 278 Gene3D G3DSA:2.60.120.10 132 278 6.7E-54 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS09885 d4ee2137583183f3517e38b55e044e06 278 Gene3D G3DSA:2.60.120.520 24 131 1.9E-52 T 29-03-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM460_RS12825 343a189a00a1f2ebc699b814ccb11536 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 9.9E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM460_RS12825 343a189a00a1f2ebc699b814ccb11536 215 SUPERFAMILY SSF52833 1 84 7.18E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS12825 343a189a00a1f2ebc699b814ccb11536 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 5.3E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS12825 343a189a00a1f2ebc699b814ccb11536 215 Gene3D G3DSA:3.40.30.10 2 97 3.5E-25 T 29-03-2018 AM460_RS12825 343a189a00a1f2ebc699b814ccb11536 215 SUPERFAMILY SSF47616 78 201 2.73E-34 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS12825 343a189a00a1f2ebc699b814ccb11536 215 Gene3D G3DSA:1.20.1050.10 98 195 2.1E-30 T 29-03-2018 AM460_RS23500 160d9333c2a85beaf3737c2b0249c199 276 Gene3D G3DSA:3.40.50.970 3 276 4.1E-62 T 29-03-2018 AM460_RS23500 160d9333c2a85beaf3737c2b0249c199 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 28 270 1.6E-39 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS23500 160d9333c2a85beaf3737c2b0249c199 276 SUPERFAMILY SSF52518 7 273 5.52E-75 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS24240 43b40eec41574e304aeb711bfdc83b82 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.408 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM460_RS24240 43b40eec41574e304aeb711bfdc83b82 163 Gene3D G3DSA:3.30.70.990 10 97 3.7E-30 T 29-03-2018 IPR035570 UPF0234 N-terminal domain AM460_RS24240 43b40eec41574e304aeb711bfdc83b82 163 Gene3D G3DSA:3.30.70.860 98 162 1.3E-34 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain AM460_RS24240 43b40eec41574e304aeb711bfdc83b82 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 2.1E-65 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM460_RS24240 43b40eec41574e304aeb711bfdc83b82 163 SUPERFAMILY SSF89963 2 89 2.88E-30 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM460_RS24240 43b40eec41574e304aeb711bfdc83b82 163 SUPERFAMILY SSF89963 91 163 1.99E-29 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM460_RS05250 158a7d2799ad5926af931e1584140cfe 226 Pfam PF11622 Protein of unknown function (DUF3251) 115 203 3.3E-5 T 29-03-2018 IPR021658 Domain of unknown function DUF3251 AM460_RS05250 158a7d2799ad5926af931e1584140cfe 226 Gene3D G3DSA:2.60.40.1620 87 205 4.6E-32 T 29-03-2018 IPR021658 Domain of unknown function DUF3251 AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF13247 4Fe-4S dicluster domain 55 104 4.2E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 71 126 3.1E-17 T 29-03-2018 AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF12800 4Fe-4S binding domain 10 22 0.45 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 SUPERFAMILY SSF54862 1 170 4.13E-42 T 29-03-2018 AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 127 173 4.7E-8 T 29-03-2018 AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 1 18 0.016 T 29-03-2018 AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF12798 4Fe-4S binding domain 131 151 0.061 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 19 70 3.4E-9 T 29-03-2018 AM460_RS10705 cc70f09fe5af29105781fd3a8a15181b 175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 SUPERFAMILY SSF111369 41 112 3.01E-8 T 29-03-2018 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 Gene3D G3DSA:2.40.50.100 46 121 1.5E-14 T 29-03-2018 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 Pfam PF13533 Biotin-lipoyl like 48 94 1.1E-10 T 29-03-2018 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 4.1E-6 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 4.1E-6 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 SUPERFAMILY SSF111369 189 286 3.53E-5 T 29-03-2018 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 Pfam PF13437 HlyD family secretion protein 214 318 5.8E-13 T 29-03-2018 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 Gene3D G3DSA:1.10.287.470 122 175 2.1E-9 T 29-03-2018 AM460_RS05945 05aa135a00990bd35dc50981eed16f9d 355 Gene3D G3DSA:1.20.1600.10 176 316 9.4E-8 T 29-03-2018 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 309 3.5E-46 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 421 470 3.3E-9 T 29-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 SUPERFAMILY SSF53335 7 310 3.22E-68 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 Gene3D G3DSA:3.40.50.150 101 316 3.4E-61 T 29-03-2018 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 3.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 3.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 3.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 3.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 3.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 41 310 2.0E-117 T 29-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 6 475 65.821 T 29-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 8 105 2.2E-28 T 29-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS15805 1bfbe3802f191be7cbe18ffdc45c8968 479 Gene3D G3DSA:3.30.70.1170 29 100 1.6E-21 T 29-03-2018 AM460_RS26205 d43efdacf03de1c7002c21b246706bd3 256 Pfam PF01012 Electron transfer flavoprotein domain 28 210 6.1E-39 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS26205 d43efdacf03de1c7002c21b246706bd3 256 Hamap MF_01055 Protein FixA [fixA]. 1 256 53.931 T 29-03-2018 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 AM460_RS26205 d43efdacf03de1c7002c21b246706bd3 256 SUPERFAMILY SSF52402 1 253 1.53E-60 T 29-03-2018 AM460_RS26205 d43efdacf03de1c7002c21b246706bd3 256 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 29-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AM460_RS26205 d43efdacf03de1c7002c21b246706bd3 256 PIRSF PIRSF000090 1 256 3.8E-68 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AM460_RS26205 d43efdacf03de1c7002c21b246706bd3 256 Gene3D G3DSA:3.40.50.620 1 255 6.3E-54 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS26205 d43efdacf03de1c7002c21b246706bd3 256 SMART SM00893 22 215 7.7E-42 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS22740 72a8f1e6ca564ee84c9eef7c3c80a29c 129 SUPERFAMILY SSF81343 2 129 5.89E-37 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22740 72a8f1e6ca564ee84c9eef7c3c80a29c 129 Gene3D G3DSA:1.20.1300.10 1 129 3.6E-28 T 29-03-2018 AM460_RS22740 72a8f1e6ca564ee84c9eef7c3c80a29c 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 5.1E-40 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22740 72a8f1e6ca564ee84c9eef7c3c80a29c 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22740 72a8f1e6ca564ee84c9eef7c3c80a29c 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 4.6E-31 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22740 72a8f1e6ca564ee84c9eef7c3c80a29c 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22740 72a8f1e6ca564ee84c9eef7c3c80a29c 129 PIRSF PIRSF000178 1 129 2.8E-33 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS26320 90b2eab7de926e443a62acf61e144fd8 679 Gene3D G3DSA:2.60.40.1180 608 669 4.3E-29 T 29-03-2018 AM460_RS26320 90b2eab7de926e443a62acf61e144fd8 679 SUPERFAMILY SSF51011 588 669 2.23E-24 T 29-03-2018 AM460_RS26320 90b2eab7de926e443a62acf61e144fd8 679 Gene3D G3DSA:3.20.20.80 223 607 9.4E-118 T 29-03-2018 AM460_RS26320 90b2eab7de926e443a62acf61e144fd8 679 Gene3D G3DSA:2.60.40.1760 1 222 2.5E-41 T 29-03-2018 AM460_RS26320 90b2eab7de926e443a62acf61e144fd8 679 SUPERFAMILY SSF51445 227 585 9.62E-65 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS26320 90b2eab7de926e443a62acf61e144fd8 679 Pfam PF01055 Glycosyl hydrolases family 31 218 669 2.4E-113 T 29-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AM460_RS26320 90b2eab7de926e443a62acf61e144fd8 679 SUPERFAMILY SSF74650 2 224 4.39E-41 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS08125 75f1ddc04ebf9d5bc247ed264936c742 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 51.132 T 29-03-2018 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 AM460_RS08125 75f1ddc04ebf9d5bc247ed264936c742 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 1.6E-24 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS08125 75f1ddc04ebf9d5bc247ed264936c742 168 SUPERFAMILY SSF52141 2 163 8.5E-48 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS08125 75f1ddc04ebf9d5bc247ed264936c742 168 Gene3D G3DSA:3.40.470.10 1 167 2.6E-49 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM460_RS15385 a11170c823b262b95b46dd635e970c8d 394 Pfam PF12571 Phage tail-collar fibre protein 4 139 6.9E-31 T 29-03-2018 IPR022225 Phage tail fibre protein AM460_RS08520 93176714ae13ed7d2736f3b224f30350 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 1.6E-123 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM460_RS08520 93176714ae13ed7d2736f3b224f30350 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 2.1E-171 T 29-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM460_RS08520 93176714ae13ed7d2736f3b224f30350 395 SUPERFAMILY SSF53383 31 393 1.85E-90 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS08520 93176714ae13ed7d2736f3b224f30350 395 PIRSF PIRSF001434 1 395 6.5E-121 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM460_RS08520 93176714ae13ed7d2736f3b224f30350 395 Gene3D G3DSA:3.40.640.10 1 258 4.3E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS08520 93176714ae13ed7d2736f3b224f30350 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM460_RS08520 93176714ae13ed7d2736f3b224f30350 395 Gene3D G3DSA:3.90.1150.10 259 395 3.5E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS24300 5fa597974992f8f542a940767122884c 367 Pfam PF01872 RibD C-terminal domain 147 362 6.3E-65 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM460_RS24300 5fa597974992f8f542a940767122884c 367 Gene3D G3DSA:3.40.430.10 125 364 1.2E-69 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM460_RS24300 5fa597974992f8f542a940767122884c 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 4.2E-24 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM460_RS24300 5fa597974992f8f542a940767122884c 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM460_RS24300 5fa597974992f8f542a940767122884c 367 Gene3D G3DSA:3.40.140.10 1 124 2.8E-35 T 29-03-2018 AM460_RS24300 5fa597974992f8f542a940767122884c 367 SUPERFAMILY SSF53927 3 145 8.03E-51 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM460_RS24300 5fa597974992f8f542a940767122884c 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 364 1.8E-84 T 29-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AM460_RS24300 5fa597974992f8f542a940767122884c 367 SUPERFAMILY SSF53597 144 362 2.49E-59 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM460_RS24300 5fa597974992f8f542a940767122884c 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 5.1E-161 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM460_RS24300 5fa597974992f8f542a940767122884c 367 PIRSF PIRSF006769 1 367 1.1E-142 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 Gene3D G3DSA:1.20.1560.10 1 312 1.1E-22 T 29-03-2018 AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 Pfam PF00005 ABC transporter 341 477 1.1E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 SMART SM00382 348 526 2.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 SUPERFAMILY SSF52540 316 530 3.67E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 SUPERFAMILY SSF90123 4 299 1.7E-26 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 Gene3D G3DSA:3.40.50.300 313 542 2.1E-43 T 29-03-2018 AM460_RS13275 37641301b18d80f732049a315bfcd6f3 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 4.5E-110 T 29-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 AM460_RS11945 33d2782f808a2de18f9552f2ad220a60 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS11945 33d2782f808a2de18f9552f2ad220a60 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 9.3E-132 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS11945 33d2782f808a2de18f9552f2ad220a60 429 Pfam PF00860 Permease family 16 382 1.4E-108 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS05545 c9bd990a626f03ec26b1ee190fd27dfa 535 Gene3D G3DSA:3.90.76.10 38 203 7.7E-39 T 29-03-2018 AM460_RS05545 c9bd990a626f03ec26b1ee190fd27dfa 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.2E-108 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS05545 c9bd990a626f03ec26b1ee190fd27dfa 535 Gene3D G3DSA:3.10.105.10 300 507 8.4E-64 T 29-03-2018 AM460_RS05545 c9bd990a626f03ec26b1ee190fd27dfa 535 PIRSF PIRSF002741 21 535 1.1E-121 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS05545 c9bd990a626f03ec26b1ee190fd27dfa 535 Gene3D G3DSA:3.40.190.10 204 299 4.4E-29 T 29-03-2018 AM460_RS05545 c9bd990a626f03ec26b1ee190fd27dfa 535 SUPERFAMILY SSF53850 29 534 3.26E-163 T 29-03-2018 AM460_RS05545 c9bd990a626f03ec26b1ee190fd27dfa 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM460_RS13280 da80f1f6a69e791d8ee0499873050c1e 548 Gene3D G3DSA:3.50.50.60 24 462 4.0E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13280 da80f1f6a69e791d8ee0499873050c1e 548 SUPERFAMILY SSF51905 28 91 7.22E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13280 da80f1f6a69e791d8ee0499873050c1e 548 SUPERFAMILY SSF51905 144 358 7.22E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13280 da80f1f6a69e791d8ee0499873050c1e 548 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 516 1.2E-215 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM460_RS13280 da80f1f6a69e791d8ee0499873050c1e 548 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 518 55.349 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM460_RS13280 da80f1f6a69e791d8ee0499873050c1e 548 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 518 2.0E-239 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM460_RS19565 3f5a7aaa1eb288c0b77b1e14d2663e84 275 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS19565 3f5a7aaa1eb288c0b77b1e14d2663e84 275 SUPERFAMILY SSF52540 6 233 7.79E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19565 3f5a7aaa1eb288c0b77b1e14d2663e84 275 SMART SM00382 32 248 2.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS19565 3f5a7aaa1eb288c0b77b1e14d2663e84 275 Pfam PF00005 ABC transporter 23 170 6.1E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS19565 3f5a7aaa1eb288c0b77b1e14d2663e84 275 Gene3D G3DSA:3.40.50.300 2 246 5.5E-56 T 29-03-2018 AM460_RS24380 3386f1853765b9c283a6fd6a9c125e28 400 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 373 2.3E-24 T 29-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AM460_RS24380 3386f1853765b9c283a6fd6a9c125e28 400 SUPERFAMILY SSF56300 1 335 9.4E-60 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS24380 3386f1853765b9c283a6fd6a9c125e28 400 Pfam PF00149 Calcineurin-like phosphoesterase 1 225 7.0E-18 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS24380 3386f1853765b9c283a6fd6a9c125e28 400 Gene3D G3DSA:3.60.21.10 64 277 1.0E-21 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS24380 3386f1853765b9c283a6fd6a9c125e28 400 Gene3D G3DSA:3.60.21.10 1 63 3.5E-16 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS24380 3386f1853765b9c283a6fd6a9c125e28 400 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 254 2.1E-94 T 29-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AM460_RS03705 341c62d62a3e4a84cccbbb8efed4a5aa 336 Pfam PF00107 Zinc-binding dehydrogenase 177 295 8.3E-12 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS03705 341c62d62a3e4a84cccbbb8efed4a5aa 336 Gene3D G3DSA:3.90.180.10 2 334 2.3E-59 T 29-03-2018 AM460_RS03705 341c62d62a3e4a84cccbbb8efed4a5aa 336 SUPERFAMILY SSF51735 140 300 5.19E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS03705 341c62d62a3e4a84cccbbb8efed4a5aa 336 SMART SM00829 14 331 0.0037 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS03705 341c62d62a3e4a84cccbbb8efed4a5aa 336 SUPERFAMILY SSF50129 13 175 1.04E-45 T 29-03-2018 IPR011032 GroES-like AM460_RS03705 341c62d62a3e4a84cccbbb8efed4a5aa 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 134 2.6E-30 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS25655 8a17bc5b72285b379f08b1b6f5f197fd 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 8.4E-107 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM460_RS25655 8a17bc5b72285b379f08b1b6f5f197fd 264 PIRSF PIRSF000388 1 264 2.4E-99 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM460_RS25655 8a17bc5b72285b379f08b1b6f5f197fd 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 1.6E-131 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM460_RS25655 8a17bc5b72285b379f08b1b6f5f197fd 264 Gene3D G3DSA:3.20.20.60 1 263 1.6E-84 T 29-03-2018 AM460_RS25655 8a17bc5b72285b379f08b1b6f5f197fd 264 SUPERFAMILY SSF51621 4 263 2.11E-105 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS25655 8a17bc5b72285b379f08b1b6f5f197fd 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.393 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM460_RS08415 d79f43b8f4c40aef193277852d830dab 219 Gene3D G3DSA:1.10.10.10 122 219 1.9E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08415 d79f43b8f4c40aef193277852d830dab 219 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-31 T 29-03-2018 AM460_RS08415 d79f43b8f4c40aef193277852d830dab 219 Pfam PF00072 Response regulator receiver domain 3 112 7.8E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS08415 d79f43b8f4c40aef193277852d830dab 219 SUPERFAMILY SSF52172 1 173 1.66E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS08415 d79f43b8f4c40aef193277852d830dab 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.9E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS08415 d79f43b8f4c40aef193277852d830dab 219 SMART SM00448 1 112 2.6E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS08415 d79f43b8f4c40aef193277852d830dab 219 SMART SM00862 145 216 2.3E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS23385 3207cafa8258fce94da08ca20ff8fb0c 362 Gene3D G3DSA:1.20.1090.10 163 362 2.0E-27 T 29-03-2018 AM460_RS23385 3207cafa8258fce94da08ca20ff8fb0c 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 2.8E-49 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS23385 3207cafa8258fce94da08ca20ff8fb0c 362 SUPERFAMILY SSF56796 9 357 3.53E-60 T 29-03-2018 AM460_RS23385 3207cafa8258fce94da08ca20ff8fb0c 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS23385 3207cafa8258fce94da08ca20ff8fb0c 362 Gene3D G3DSA:3.40.50.1970 3 162 3.5E-23 T 29-03-2018 AM460_RS23385 3207cafa8258fce94da08ca20ff8fb0c 362 PIRSF PIRSF000112 2 362 3.9E-131 T 29-03-2018 AM460_RS24360 111a14e2f39729750ab3bfc622cd4712 457 PIRSF PIRSF006060 1 456 2.6E-77 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS24360 111a14e2f39729750ab3bfc622cd4712 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS24360 111a14e2f39729750ab3bfc622cd4712 457 Pfam PF00324 Amino acid permease 15 451 4.2E-105 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS06285 ceb2a7ed7502ddd83c5f6d59d94f11ac 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 274 46.067 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AM460_RS06285 ceb2a7ed7502ddd83c5f6d59d94f11ac 276 SUPERFAMILY SSF144091 92 267 3.53E-45 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM460_RS06285 ceb2a7ed7502ddd83c5f6d59d94f11ac 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 269 2.5E-117 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AM460_RS06285 ceb2a7ed7502ddd83c5f6d59d94f11ac 276 Gene3D G3DSA:1.20.1540.10 91 269 2.7E-38 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM460_RS06285 ceb2a7ed7502ddd83c5f6d59d94f11ac 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 1.5E-29 T 29-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AM460_RS06285 ceb2a7ed7502ddd83c5f6d59d94f11ac 276 Pfam PF01694 Rhomboid family 132 268 4.1E-29 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM460_RS20295 65fa17bfaf6735c35e95c8684a4b9096 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 52.016 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM460_RS20295 65fa17bfaf6735c35e95c8684a4b9096 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 2.2E-122 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM460_RS20295 65fa17bfaf6735c35e95c8684a4b9096 306 PIRSF PIRSF026649 2 306 4.8E-114 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM460_RS20295 65fa17bfaf6735c35e95c8684a4b9096 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 5.4E-151 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 Gene3D G3DSA:1.10.1060.10 107 238 2.6E-29 T 29-03-2018 AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 SUPERFAMILY SSF54292 1 106 6.18E-30 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.4E-31 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 SUPERFAMILY SSF46548 107 236 9.07E-40 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 2.9E-92 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 3.8E-10 T 29-03-2018 AM460_RS22725 fd8c9643325bacc730ef2556804f8f2a 238 Gene3D G3DSA:3.10.20.30 1 106 3.5E-32 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS17265 b45f5a7ec8caf42b8ad435df330fc7a4 395 Pfam PF07690 Major Facilitator Superfamily 13 342 8.8E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS17265 b45f5a7ec8caf42b8ad435df330fc7a4 395 SUPERFAMILY SSF103473 7 384 1.7E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17265 b45f5a7ec8caf42b8ad435df330fc7a4 395 Gene3D G3DSA:1.20.1250.20 1 190 2.1E-24 T 29-03-2018 AM460_RS17265 b45f5a7ec8caf42b8ad435df330fc7a4 395 Gene3D G3DSA:1.20.1250.20 195 388 4.6E-12 T 29-03-2018 AM460_RS11225 cfb05cea17ecca9329dcc2c10d8e9515 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 1.6E-99 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM460_RS11225 cfb05cea17ecca9329dcc2c10d8e9515 232 Pfam PF05100 Phage minor tail protein L 29 230 6.1E-97 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM460_RS19620 640d64ebbd748156276803ad0e1dc782 853 Pfam PF06791 Prophage tail length tape measure protein 54 256 3.6E-66 T 29-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal AM460_RS19620 640d64ebbd748156276803ad0e1dc782 853 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 627 701 9.7E-21 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM460_RS19620 640d64ebbd748156276803ad0e1dc782 853 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 472 813 3.4E-135 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 3.4E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.4E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 157 174 3.4E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 175 187 3.4E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 97 111 3.4E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 18 726 0.0 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 SUPERFAMILY SSF48113 435 725 6.19E-106 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 SUPERFAMILY SSF48113 30 429 2.5E-141 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 Pfam PF00141 Peroxidase 77 396 3.0E-48 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 Pfam PF00141 Peroxidase 403 700 2.7E-35 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 259 269 - T 29-03-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 443 589 1.7E-31 T 29-03-2018 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 ProSitePatterns PS00436 Peroxidases active site signature. 97 108 - T 29-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 74 99 8.4E-53 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 8.4E-53 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 33 55 8.4E-53 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 8.4E-53 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 59 72 8.4E-53 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 Hamap MF_01961 Catalase-peroxidase [katG]. 11 726 39.622 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 63 215 7.6E-34 T 29-03-2018 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 590 701 1.6E-35 T 29-03-2018 AM460_RS03355 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 231 397 9.1E-39 T 29-03-2018 AM460_RS05265 c6deb7847a6f01c74734deeba375556a 195 SUPERFAMILY SSF158668 26 187 6.41E-59 T 29-03-2018 AM460_RS05265 c6deb7847a6f01c74734deeba375556a 195 Gene3D G3DSA:1.20.120.330 27 187 8.7E-58 T 29-03-2018 AM460_RS05265 c6deb7847a6f01c74734deeba375556a 195 Pfam PF05068 Mannitol repressor 29 187 1.4E-61 T 29-03-2018 IPR007761 Mannitol repressor MtlR-like AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 SUPERFAMILY SSF53850 21 326 1.09E-93 T 29-03-2018 AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 2.1E-46 T 29-03-2018 AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 29-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 Gene3D G3DSA:3.40.190.10 126 245 3.3E-27 T 29-03-2018 AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 Gene3D G3DSA:3.40.190.10 246 329 1.6E-27 T 29-03-2018 AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 Gene3D G3DSA:3.40.190.10 20 125 2.7E-25 T 29-03-2018 AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 29-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site AM460_RS03490 b11747f8acc8665a5e669a53b374a517 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 2.7E-192 T 29-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM460_RS09705 bdb84d882dd9a33c97d64ebed39a9242 173 TIGRFAM TIGR01752 flav_long: flavodoxin 3 168 1.8E-69 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM460_RS09705 bdb84d882dd9a33c97d64ebed39a9242 173 Gene3D G3DSA:3.40.50.360 77 173 7.9E-18 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS09705 bdb84d882dd9a33c97d64ebed39a9242 173 Gene3D G3DSA:3.40.50.360 2 76 6.0E-15 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS09705 bdb84d882dd9a33c97d64ebed39a9242 173 SUPERFAMILY SSF52218 1 168 1.51E-46 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS09705 bdb84d882dd9a33c97d64ebed39a9242 173 PIRSF PIRSF038996 1 172 2.8E-55 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM460_RS09705 bdb84d882dd9a33c97d64ebed39a9242 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM460_RS09705 bdb84d882dd9a33c97d64ebed39a9242 173 Pfam PF00258 Flavodoxin 5 160 3.4E-28 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM460_RS19650 06450233bd2c56f2786bf25fadfb7087 117 Gene3D G3DSA:2.40.10.180 1 117 4.9E-37 T 29-03-2018 AM460_RS19650 06450233bd2c56f2786bf25fadfb7087 117 SUPERFAMILY SSF69279 2 117 1.36E-55 T 29-03-2018 AM460_RS19650 06450233bd2c56f2786bf25fadfb7087 117 Pfam PF05354 Phage Head-Tail Attachment 2 117 8.3E-66 T 29-03-2018 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 AM460_RS19650 06450233bd2c56f2786bf25fadfb7087 117 ProDom PD031229 PROPHAGE HEAD-TAIL JOINING CAPSID TAIL ATTACHMENT MINOR GIFSY-1 FII CP-933X 1 117 4.0E-62 T 29-03-2018 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00448 4 120 3.8E-15 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF46894 146 207 2.38E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF52172 3 135 5.27E-21 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:3.40.50.2300 3 131 3.2E-21 T 29-03-2018 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00421 148 205 4.2E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.521 T 29-03-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00072 Response regulator receiver domain 6 120 1.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13235 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:1.10.10.10 132 215 2.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25235 689d88b686145dfa1ae813a2c0d2a774 240 Gene3D G3DSA:3.40.50.150 51 210 9.9E-17 T 29-03-2018 AM460_RS25235 689d88b686145dfa1ae813a2c0d2a774 240 Pfam PF08241 Methyltransferase domain 71 125 3.8E-11 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM460_RS25235 689d88b686145dfa1ae813a2c0d2a774 240 SUPERFAMILY SSF53335 77 203 3.96E-18 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 Gene3D G3DSA:1.10.240.10 228 330 2.8E-33 T 29-03-2018 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 Pfam PF01479 S4 domain 359 403 3.9E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 SUPERFAMILY SSF55174 327 423 1.57E-20 T 29-03-2018 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.949 T 29-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 Gene3D G3DSA:3.10.290.10 331 424 6.8E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 SMART SM00363 358 419 3.5E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 Gene3D G3DSA:3.40.50.620 1 227 5.0E-72 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.5E-94 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 2.6E-152 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM460_RS16880 681af77515750a11db37bcd4ed5ebe76 424 SUPERFAMILY SSF52374 4 328 4.41E-111 T 29-03-2018 AM460_RS22860 10de2b3432ce00578ace7310aac94da8 557 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 1.9E-302 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM460_RS22860 10de2b3432ce00578ace7310aac94da8 557 Pfam PF03814 Potassium-transporting ATPase A subunit 11 556 4.7E-237 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM460_RS22860 10de2b3432ce00578ace7310aac94da8 557 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 557 34.357 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM460_RS22860 10de2b3432ce00578ace7310aac94da8 557 PIRSF PIRSF001294 1 557 1.2E-231 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM460_RS24570 22e609e41ac3ca45063d99e6015a2068 403 Gene3D G3DSA:1.20.1250.20 9 200 4.4E-31 T 29-03-2018 AM460_RS24570 22e609e41ac3ca45063d99e6015a2068 403 Gene3D G3DSA:1.20.1250.20 201 396 6.0E-20 T 29-03-2018 AM460_RS24570 22e609e41ac3ca45063d99e6015a2068 403 SUPERFAMILY SSF103473 7 396 1.83E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS24570 22e609e41ac3ca45063d99e6015a2068 403 Pfam PF07690 Major Facilitator Superfamily 21 302 8.2E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS24570 22e609e41ac3ca45063d99e6015a2068 403 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS24570 22e609e41ac3ca45063d99e6015a2068 403 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS03785 929bd60d6ac612b42692ee94b9f06fe8 310 SUPERFAMILY SSF69593 19 296 2.22E-25 T 29-03-2018 AM460_RS03785 929bd60d6ac612b42692ee94b9f06fe8 310 SMART SM00563 97 224 2.6E-15 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS03785 929bd60d6ac612b42692ee94b9f06fe8 310 Pfam PF01553 Acyltransferase 84 216 3.7E-13 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS03785 929bd60d6ac612b42692ee94b9f06fe8 310 Gene3D G3DSA:3.40.1130.10 52 233 5.3E-21 T 29-03-2018 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 Gene3D G3DSA:3.20.20.360 218 588 2.4E-92 T 29-03-2018 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 Gene3D G3DSA:3.20.20.360 89 207 2.8E-20 T 29-03-2018 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 Gene3D G3DSA:1.10.1860.10 1 88 1.9E-32 T 29-03-2018 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 Pfam PF01274 Malate synthase 18 697 8.8E-200 T 29-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 723 0.0 T 29-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 Hamap MF_00641 Malate synthase G [glcB]. 1 723 372.006 T 29-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 Gene3D G3DSA:1.20.1220.12 589 723 2.1E-46 T 29-03-2018 AM460_RS08715 a6e5147e50838cb8c430978f60dc94f2 723 SUPERFAMILY SSF51645 4 720 3.66E-292 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS19300 fa0d6a384d71d915277da0d4e1caeed9 656 Gene3D G3DSA:2.170.130.10 34 150 4.5E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS19300 fa0d6a384d71d915277da0d4e1caeed9 656 Pfam PF00593 TonB dependent receptor 242 655 5.0E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS19300 fa0d6a384d71d915277da0d4e1caeed9 656 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 639 656 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS19300 fa0d6a384d71d915277da0d4e1caeed9 656 Gene3D G3DSA:2.40.170.20 151 656 8.3E-53 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS19300 fa0d6a384d71d915277da0d4e1caeed9 656 SUPERFAMILY SSF56935 37 656 3.82E-87 T 29-03-2018 AM460_RS19300 fa0d6a384d71d915277da0d4e1caeed9 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 139 1.3E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS02655 d3934ab8acaaa738f62f87bcaac2c8ce 357 SUPERFAMILY SSF89733 5 346 7.06E-94 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS02655 d3934ab8acaaa738f62f87bcaac2c8ce 357 Gene3D G3DSA:1.10.1530.10 4 81 2.5E-18 T 29-03-2018 AM460_RS02655 d3934ab8acaaa738f62f87bcaac2c8ce 357 Pfam PF02615 Malate/L-lactate dehydrogenase 6 332 8.1E-94 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS02655 d3934ab8acaaa738f62f87bcaac2c8ce 357 Gene3D G3DSA:3.30.1370.60 82 309 4.1E-73 T 29-03-2018 AM460_RS05695 3f96c1ab1f92ba4b14a0bcb7b7f50560 255 SMART SM00052 7 247 1.7E-55 T 29-03-2018 IPR001633 EAL domain AM460_RS05695 3f96c1ab1f92ba4b14a0bcb7b7f50560 255 SUPERFAMILY SSF141868 26 249 5.89E-30 T 29-03-2018 IPR001633 EAL domain AM460_RS05695 3f96c1ab1f92ba4b14a0bcb7b7f50560 255 Gene3D G3DSA:3.20.20.450 20 254 1.0E-29 T 29-03-2018 IPR001633 EAL domain AM460_RS05695 3f96c1ab1f92ba4b14a0bcb7b7f50560 255 Pfam PF00563 EAL domain 27 242 3.9E-30 T 29-03-2018 IPR001633 EAL domain AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 SMART SM00829 12 321 2.3E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 1.9E-4 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 Pfam PF00107 Zinc-binding dehydrogenase 158 282 2.9E-17 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 Gene3D G3DSA:3.90.180.10 1 139 2.3E-24 T 29-03-2018 AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 SUPERFAMILY SSF50129 1 144 7.55E-47 T 29-03-2018 IPR011032 GroES-like AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 7.4E-144 T 29-03-2018 IPR014188 Acrylyl-CoA reductase AcuI AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 SUPERFAMILY SSF51735 115 286 2.18E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07205 641015b3637ae922bac8416fea1895c7 324 Gene3D G3DSA:3.40.50.720 140 291 6.1E-23 T 29-03-2018 AM460_RS24085 5de6eeb0f91ff9b21f6a20659c904dc6 117 PIRSF PIRSF007028 1 117 5.4E-56 T 29-03-2018 IPR009874 Protein of unknown function DUF1428 AM460_RS24085 5de6eeb0f91ff9b21f6a20659c904dc6 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 4.3E-47 T 29-03-2018 IPR009874 Protein of unknown function DUF1428 AM460_RS24085 5de6eeb0f91ff9b21f6a20659c904dc6 117 Gene3D G3DSA:3.30.70.100 1 117 4.2E-61 T 29-03-2018 AM460_RS24085 5de6eeb0f91ff9b21f6a20659c904dc6 117 SUPERFAMILY SSF54909 1 116 2.15E-53 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS05600 58be573dd4eaa1248db9faad9f133b63 65 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 31 65 3.2E-25 T 29-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr AM460_RS27660 6ce353220b135516754dd2a997ab554c 144 Pfam PF07128 Protein of unknown function (DUF1380) 1 136 1.9E-67 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 2.0E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 8 138 3.0E-55 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 SUPERFAMILY SSF54523 35 140 4.13E-38 T 29-03-2018 AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.1E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 1.3E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 1.3E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 138 2.2E-37 T 29-03-2018 IPR013545 Type II secretion system protein G AM460_RS06780 bc1dc24fab86562c3462933fd74e04c8 145 Gene3D G3DSA:3.30.700.10 23 138 4.7E-32 T 29-03-2018 AM460_RS20065 5c96612253d5137046f0005b72e1e632 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 3.4E-97 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AM460_RS20065 5c96612253d5137046f0005b72e1e632 265 Gene3D G3DSA:3.20.20.140 1 264 8.8E-81 T 29-03-2018 AM460_RS20065 5c96612253d5137046f0005b72e1e632 265 PIRSF PIRSF005902 1 259 2.9E-75 T 29-03-2018 IPR001130 TatD family GO:0016788 AM460_RS20065 5c96612253d5137046f0005b72e1e632 265 SUPERFAMILY SSF51556 1 259 8.52E-89 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS20065 5c96612253d5137046f0005b72e1e632 265 Pfam PF01026 TatD related DNase 4 255 1.3E-76 T 29-03-2018 IPR001130 TatD family GO:0016788 AM460_RS20065 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM460_RS20065 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 378 397 5.1E-38 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 362 376 5.1E-38 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 5.1E-38 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 5.1E-38 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 TIGRFAM TIGR02120 GspF: type II secretion system protein F 3 397 2.9E-165 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 Pfam PF00482 Type II secretion system (T2SS), protein F 267 387 5.2E-23 T 29-03-2018 IPR018076 Type II secretion system F domain AM460_RS06785 bc7db3f0c5ae566ed5800545a2196ef8 398 Pfam PF00482 Type II secretion system (T2SS), protein F 64 187 4.6E-30 T 29-03-2018 IPR018076 Type II secretion system F domain AM460_RS25190 5b3a74c3ccac39b6b6ad2d79e078b3be 255 Gene3D G3DSA:3.60.20.10 1 255 1.0E-45 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS25190 5b3a74c3ccac39b6b6ad2d79e078b3be 255 SUPERFAMILY SSF56235 2 253 1.37E-52 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS25190 5b3a74c3ccac39b6b6ad2d79e078b3be 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 8.1E-115 T 29-03-2018 IPR026869 Putative glutamine amidotransferase type 2 AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 Gene3D G3DSA:3.40.30.10 438 564 1.7E-20 T 29-03-2018 AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 SUPERFAMILY SSF52833 444 561 6.46E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 Pfam PF11412 Disulphide bond corrector protein DsbC 28 138 9.6E-36 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 Gene3D G3DSA:2.60.40.1250 20 144 2.5E-40 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 564 40.65 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 171 376 1.5E-18 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 Pfam PF13098 Thioredoxin-like domain 465 560 4.1E-12 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 ProSitePatterns PS00194 Thioredoxin family active site. 472 490 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM460_RS02080 094620440ae4bce55d45dc56fac1481e 565 SUPERFAMILY SSF74863 27 141 6.15E-42 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 Gene3D G3DSA:3.80.30.10 115 292 6.2E-30 T 29-03-2018 AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 SUPERFAMILY SSF102114 99 253 1.18E-11 T 29-03-2018 AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 SUPERFAMILY SSF102114 35 67 1.18E-11 T 29-03-2018 AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 Pfam PF04055 Radical SAM superfamily 41 222 9.9E-23 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 PIRSF PIRSF000371 13 85 8.7E-29 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 PIRSF PIRSF000371 61 292 1.1E-76 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM460_RS03310 f8be83d2f0d08328576ca1683c3d8028 292 Pfam PF13353 4Fe-4S single cluster domain 34 144 2.9E-10 T 29-03-2018 AM460_RS17820 553c62da37e615764829747810c072b4 2838 SUPERFAMILY SSF103515 2612 2838 1.2E-18 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 829 860 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 535 566 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 1290 1321 1600.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 1025 1056 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 731 762 690.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 1094 1125 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 1388 1410 3900.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 1520 1555 7400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 437 468 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 633 664 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 154 190 5600.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 339 370 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 1192 1223 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 SMART SM00710 927 958 1400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM460_RS17820 553c62da37e615764829747810c072b4 2838 Gene3D G3DSA:2.160.20.20 1388 1745 4.8E-5 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS20760 6dbc9e9c4960df9634ecc73b2916c420 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 31.297 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM460_RS20760 6dbc9e9c4960df9634ecc73b2916c420 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 4.0E-72 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM460_RS20760 6dbc9e9c4960df9634ecc73b2916c420 150 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 3.7E-31 T 29-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain AM460_RS20760 6dbc9e9c4960df9634ecc73b2916c420 150 Gene3D G3DSA:1.10.3990.20 79 139 5.0E-5 T 29-03-2018 AM460_RS20760 6dbc9e9c4960df9634ecc73b2916c420 150 Pfam PF06303 MatP N-terminal domain 2 85 3.2E-44 T 29-03-2018 IPR035087 MatP, N-terminal AM460_RS16455 045e0e7d5dff1f700ee6232859e26b64 327 Gene3D G3DSA:3.30.930.10 7 327 1.3E-91 T 29-03-2018 AM460_RS16455 045e0e7d5dff1f700ee6232859e26b64 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.6E-107 T 29-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AM460_RS16455 045e0e7d5dff1f700ee6232859e26b64 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 50.131 T 29-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AM460_RS16455 045e0e7d5dff1f700ee6232859e26b64 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.7E-27 T 29-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM460_RS16455 045e0e7d5dff1f700ee6232859e26b64 327 SUPERFAMILY SSF46589 14 99 8.89E-23 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM460_RS16455 045e0e7d5dff1f700ee6232859e26b64 327 SUPERFAMILY SSF55681 92 327 7.96E-82 T 29-03-2018 AM460_RS16455 045e0e7d5dff1f700ee6232859e26b64 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.6E-119 T 29-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM460_RS07860 994df575ca9a00e2f723808a842887e5 329 Gene3D G3DSA:3.40.50.1100 113 329 9.5E-54 T 29-03-2018 AM460_RS07860 994df575ca9a00e2f723808a842887e5 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 312 7.1E-79 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS07860 994df575ca9a00e2f723808a842887e5 329 Gene3D G3DSA:3.40.50.1100 57 112 8.8E-21 T 29-03-2018 AM460_RS07860 994df575ca9a00e2f723808a842887e5 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM460_RS07860 994df575ca9a00e2f723808a842887e5 329 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 7.0E-116 T 29-03-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM460_RS07860 994df575ca9a00e2f723808a842887e5 329 SUPERFAMILY SSF53686 11 321 1.31E-93 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS01910 3cf4551f131dd653f0227023b6c1c1fb 153 Gene3D G3DSA:3.40.50.300 1 153 1.4E-51 T 29-03-2018 AM460_RS01910 3cf4551f131dd653f0227023b6c1c1fb 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 1.1E-59 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM460_RS01910 3cf4551f131dd653f0227023b6c1c1fb 153 SUPERFAMILY SSF52540 29 131 9.25E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01910 3cf4551f131dd653f0227023b6c1c1fb 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.2E-42 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM460_RS09800 dd4266a63028e61e4df78f0a80bd384f 192 SUPERFAMILY SSF53448 1 189 1.64E-24 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS09800 dd4266a63028e61e4df78f0a80bd384f 192 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 5 184 1.2E-64 T 29-03-2018 IPR017696 Molybdenum cofactor cytidylyltransferase KEGG: 00790+2.7.7.76|MetaCyc: PWY-6476 AM460_RS09800 dd4266a63028e61e4df78f0a80bd384f 192 Pfam PF12804 MobA-like NTP transferase domain 6 144 1.8E-25 T 29-03-2018 IPR025877 MobA-like NTP transferase AM460_RS09800 dd4266a63028e61e4df78f0a80bd384f 192 Gene3D G3DSA:3.90.550.10 1 192 7.4E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS20460 2545b7e3e048c25a81945f7d345422c1 423 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 6 422 2.9E-186 T 29-03-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 AM460_RS20460 2545b7e3e048c25a81945f7d345422c1 423 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 61 410 2.4E-108 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM460_RS20460 2545b7e3e048c25a81945f7d345422c1 423 SUPERFAMILY SSF54909 54 416 2.5E-99 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS20460 2545b7e3e048c25a81945f7d345422c1 423 Pfam PF04261 Dyp-type peroxidase family 61 410 7.1E-122 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 SUPERFAMILY SSF103088 103 218 9.42E-39 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 Gene3D G3DSA:3.30.1330.60 83 218 7.1E-43 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01021 OMPA domain signature 116 138 1.6E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01021 OMPA domain signature 161 177 1.6E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01021 OMPA domain signature 146 161 1.6E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 2.7E-6 T 29-03-2018 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 2.7E-6 T 29-03-2018 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 2.7E-6 T 29-03-2018 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 Pfam PF13488 Glycine zipper 37 85 3.0E-12 T 29-03-2018 AM460_RS05500 3c99c897a67a85a5760a74472b7ca318 219 Pfam PF00691 OmpA family 115 210 4.0E-23 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS06020 17128065d1de22f281602664e376f825 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 433 3.9E-93 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS06020 17128065d1de22f281602664e376f825 524 PIRSF PIRSF002741 20 520 8.4E-91 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS06020 17128065d1de22f281602664e376f825 524 Gene3D G3DSA:3.40.190.10 180 277 9.0E-25 T 29-03-2018 AM460_RS06020 17128065d1de22f281602664e376f825 524 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM460_RS06020 17128065d1de22f281602664e376f825 524 Gene3D G3DSA:3.90.76.10 35 179 1.0E-32 T 29-03-2018 AM460_RS06020 17128065d1de22f281602664e376f825 524 Gene3D G3DSA:3.10.105.10 278 493 3.1E-51 T 29-03-2018 AM460_RS06020 17128065d1de22f281602664e376f825 524 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 520 1.9E-253 T 29-03-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 AM460_RS06020 17128065d1de22f281602664e376f825 524 SUPERFAMILY SSF53850 27 517 7.24E-130 T 29-03-2018 AM460_RS03855 65d5288c2db8222ece4e8f0eb59d4d79 443 SUPERFAMILY SSF55920 163 438 1.83E-57 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS03855 65d5288c2db8222ece4e8f0eb59d4d79 443 Pfam PF00557 Metallopeptidase family M24 168 430 4.8E-47 T 29-03-2018 IPR000994 Peptidase M24 AM460_RS03855 65d5288c2db8222ece4e8f0eb59d4d79 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.546 T 29-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 AM460_RS03855 65d5288c2db8222ece4e8f0eb59d4d79 443 Gene3D G3DSA:3.90.230.10 145 442 1.6E-54 T 29-03-2018 AM460_RS03855 65d5288c2db8222ece4e8f0eb59d4d79 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM460_RS02350 34df64d0045ced8a4c3a527ea93eab4d 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 250 3.4E-124 T 29-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM460_RS02350 34df64d0045ced8a4c3a527ea93eab4d 252 Gene3D G3DSA:3.40.50.300 2 252 4.6E-63 T 29-03-2018 AM460_RS02350 34df64d0045ced8a4c3a527ea93eab4d 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02350 34df64d0045ced8a4c3a527ea93eab4d 252 Pfam PF00005 ABC transporter 22 173 1.8E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02350 34df64d0045ced8a4c3a527ea93eab4d 252 PIRSF PIRSF037116 1 252 2.2E-141 T 29-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM460_RS02350 34df64d0045ced8a4c3a527ea93eab4d 252 SUPERFAMILY SSF52540 3 248 3.91E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02350 34df64d0045ced8a4c3a527ea93eab4d 252 SMART SM00382 30 223 6.5E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF52283 7 138 1.79E-50 T 29-03-2018 AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.40.50.720 136 295 1.6E-40 T 29-03-2018 AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.7E-50 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF01842 ACT domain 345 401 5.3E-7 T 29-03-2018 IPR002912 ACT domain AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.30.70.260 328 409 7.0E-18 T 29-03-2018 AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.2E-38 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF51735 108 295 6.77E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF55021 328 409 1.15E-20 T 29-03-2018 AM460_RS09610 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.40.50.720 1 135 3.8E-43 T 29-03-2018 AM460_RS19420 9d5029004b702bc54723daa4db8308a8 270 SUPERFAMILY SSF52540 1 268 2.75E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19420 9d5029004b702bc54723daa4db8308a8 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-110 T 29-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AM460_RS19420 9d5029004b702bc54723daa4db8308a8 270 PIRSF PIRSF003092 1 270 1.3E-100 T 29-03-2018 IPR025501 ATP binding protein MinD AM460_RS19420 9d5029004b702bc54723daa4db8308a8 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 7.4E-20 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM460_RS19420 9d5029004b702bc54723daa4db8308a8 270 Gene3D G3DSA:3.40.50.300 1 260 9.8E-55 T 29-03-2018 AM460_RS27765 ef6ea72c2892baaea7863f2b0b39d75b 126 PIRSF PIRSF018297 1 126 1.1E-39 T 29-03-2018 IPR006440 Death on curing protein GO:0016301 AM460_RS27765 ef6ea72c2892baaea7863f2b0b39d75b 126 Gene3D G3DSA:1.10.3290.10 4 122 7.5E-7 T 29-03-2018 IPR003812 Fido domain AM460_RS27765 ef6ea72c2892baaea7863f2b0b39d75b 126 Pfam PF02661 Fic/DOC family 4 84 4.7E-6 T 29-03-2018 IPR003812 Fido domain AM460_RS27765 ef6ea72c2892baaea7863f2b0b39d75b 126 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 3 120 1.5E-39 T 29-03-2018 IPR006440 Death on curing protein GO:0016301 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 Gene3D G3DSA:3.40.50.880 600 753 5.4E-16 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 Pfam PF00199 Catalase 81 466 1.8E-177 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 Pfam PF06628 Catalase-related immune-responsive 499 562 3.2E-16 T 29-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 SMART SM01060 81 469 1.5E-274 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 SUPERFAMILY SSF56634 47 584 1.57E-225 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 411 419 - T 29-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 PRINTS PR00067 Catalase signature 157 175 2.9E-67 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 PRINTS PR00067 Catalase signature 178 195 2.9E-67 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 PRINTS PR00067 Catalase signature 94 117 2.9E-67 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 PRINTS PR00067 Catalase signature 366 393 2.9E-67 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 PRINTS PR00067 Catalase signature 398 424 2.9E-67 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 PRINTS PR00067 Catalase signature 197 215 2.9E-67 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 ProSitePatterns PS00438 Catalase proximal active site signature. 117 133 - T 29-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 SUPERFAMILY SSF52317 599 749 8.5E-15 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 Gene3D G3DSA:2.40.180.10 51 436 7.5E-165 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM460_RS16355 6592d60b30d8ad59ec0e549d89efe2d8 753 PIRSF PIRSF038927 42 751 0.0 T 29-03-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 SUPERFAMILY SSF46548 7 157 1.1E-41 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.1E-38 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 Gene3D G3DSA:3.50.50.60 243 314 2.8E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 Gene3D G3DSA:3.50.50.60 315 401 2.9E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 Gene3D G3DSA:3.40.50.20 145 242 2.4E-17 T 29-03-2018 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 1.0E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 Gene3D G3DSA:3.50.50.60 402 472 3.0E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 Gene3D G3DSA:1.10.1060.10 2 144 2.6E-41 T 29-03-2018 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 SUPERFAMILY SSF51971 145 401 1.06E-69 T 29-03-2018 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 4.9E-271 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 6.4E-38 T 29-03-2018 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 6.4E-38 T 29-03-2018 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 6.4E-38 T 29-03-2018 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 6.4E-38 T 29-03-2018 AM460_RS07375 e464ba477d250bda5080f21f2a5b7e9d 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 6.4E-38 T 29-03-2018 AM460_RS02375 5dab18cf4f810bfc4b4c544d2f17dc9f 252 SUPERFAMILY SSF56281 5 251 1.11E-34 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS02375 5dab18cf4f810bfc4b4c544d2f17dc9f 252 Pfam PF12706 Beta-lactamase superfamily domain 70 223 1.0E-14 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS02375 5dab18cf4f810bfc4b4c544d2f17dc9f 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 4 248 2.4E-129 T 29-03-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS02375 5dab18cf4f810bfc4b4c544d2f17dc9f 252 Gene3D G3DSA:3.60.15.10 1 252 6.5E-53 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Gene3D G3DSA:3.40.50.1360 59 231 2.2E-33 T 29-03-2018 AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SUPERFAMILY SSF100950 67 229 6.84E-29 T 29-03-2018 AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Gene3D G3DSA:1.10.10.10 1 56 2.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 8.9E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SUPERFAMILY SSF46785 1 60 3.04E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SMART SM01134 67 228 1.4E-56 T 29-03-2018 AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 7.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 7.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Pfam PF00455 DeoR C terminal sensor domain 69 227 1.0E-45 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS18220 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SMART SM00420 4 56 2.0E-24 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 Gene3D G3DSA:3.30.750.80 74 180 1.2E-33 T 29-03-2018 AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 Gene3D G3DSA:3.40.50.150 182 396 1.0E-37 T 29-03-2018 AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 Gene3D G3DSA:2.30.130.10 4 72 1.7E-26 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 114 371 4.0E-30 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.723 T 29-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 SUPERFAMILY SSF53335 79 392 1.48E-73 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 SUPERFAMILY SSF88697 4 72 5.04E-17 T 29-03-2018 IPR015947 PUA-like domain AM460_RS20700 e110d75223bc9377ec5df6170539a3c7 396 SMART SM00359 3 88 6.3E-19 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.997 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.1E-79 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 SUPERFAMILY SSF53383 5 396 1.05E-126 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 8.1E-225 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 Gene3D G3DSA:3.40.640.10 99 277 5.3E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 Gene3D G3DSA:3.90.1150.10 20 98 3.1E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS05160 cf62a54e0272eacfb32aaf22b0232e2f 398 Gene3D G3DSA:3.90.1150.10 278 397 4.2E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 SUPERFAMILY SSF81923 14 125 1.31E-18 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 861 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Gene3D G3DSA:1.10.8.60 381 559 4.4E-38 T 29-03-2018 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 SMART SM01086 780 873 1.8E-13 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Gene3D G3DSA:3.40.50.300 561 794 5.3E-35 T 29-03-2018 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 331 343 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 74 1.9E-4 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Gene3D G3DSA:1.10.8.60 795 878 5.1E-13 T 29-03-2018 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 774 1.4E-37 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 SUPERFAMILY SSF52540 558 853 1.35E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Gene3D G3DSA:1.10.1780.10 2 162 4.1E-31 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 SMART SM00382 235 380 6.7E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 SMART SM00382 609 780 4.8E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 SUPERFAMILY SSF52540 198 528 4.28E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 780 855 1.3E-13 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 240 352 9.8E-10 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 Gene3D G3DSA:3.40.50.300 194 379 1.6E-24 T 29-03-2018 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 4.2E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 4.2E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 4.2E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS10150 0178c6c2c3b1925d5d8679d84d056efe 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 4.2E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 20 208 3.9E-56 T 29-03-2018 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 4.8E-272 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 209 357 9.0E-40 T 29-03-2018 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF53067 20 196 2.2E-49 T 29-03-2018 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:1.20.1270.10 529 615 7.2E-13 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.738 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF100934 504 615 3.92E-37 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF100920 384 535 4.58E-50 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:2.60.34.10 387 528 4.0E-49 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.9E-54 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF53067 200 377 2.8E-53 T 29-03-2018 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM460_RS11765 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Pfam PF00012 Hsp70 protein 22 600 2.1E-205 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 SUPERFAMILY SSF52540 15 239 4.23E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 Gene3D G3DSA:3.40.1710.10 577 730 2.1E-24 T 29-03-2018 AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 SMART SM00382 37 225 0.012 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 SMART SM00382 301 558 2.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 SUPERFAMILY SSF52540 276 498 8.83E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 Pfam PF00005 ABC transporter 28 175 8.0E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 Pfam PF00005 ABC transporter 293 436 6.3E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 Gene3D G3DSA:3.40.50.300 9 274 2.3E-56 T 29-03-2018 AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 Gene3D G3DSA:3.40.50.300 275 553 2.9E-66 T 29-03-2018 AM460_RS05950 d4ebc35efcc7b3f2aeec26eda56e206f 911 Pfam PF12698 ABC-2 family transporter protein 569 903 2.4E-38 T 29-03-2018 AM460_RS24490 7f96e8cdcba5b70264df8173cbad350b 102 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 102 2.0E-54 T 29-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 AM460_RS24490 7f96e8cdcba5b70264df8173cbad350b 102 Pfam PF10954 Protein of unknown function (DUF2755) 1 101 9.4E-50 T 29-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:3.40.190.10 174 262 6.4E-19 T 29-03-2018 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.7E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 SUPERFAMILY SSF53850 87 291 1.93E-41 T 29-03-2018 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 SUPERFAMILY SSF46785 2 109 7.07E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:1.10.10.10 1 87 1.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:3.40.190.10 88 173 6.3E-21 T 29-03-2018 AM460_RS04030 9b6a8b733b36c0c5fff70612045a5b76 317 Pfam PF03466 LysR substrate binding domain 86 288 2.1E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS24660 129b30680fe5c0755d0dae5881e29156 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 50.707 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AM460_RS24660 129b30680fe5c0755d0dae5881e29156 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 250 1.8E-49 T 29-03-2018 AM460_RS24660 129b30680fe5c0755d0dae5881e29156 296 SUPERFAMILY SSF51621 5 288 1.39E-98 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS24660 129b30680fe5c0755d0dae5881e29156 296 Gene3D G3DSA:3.20.20.60 2 296 2.0E-91 T 29-03-2018 AM460_RS24660 129b30680fe5c0755d0dae5881e29156 296 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AM460_RS24660 129b30680fe5c0755d0dae5881e29156 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 8.7E-138 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 SUPERFAMILY SSF48452 105 280 2.39E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 SMART SM00028 214 247 0.86 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 SMART SM00028 141 174 470.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 SMART SM00028 180 213 32.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 SMART SM00028 107 140 390.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 SMART SM00028 69 102 59.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 Gene3D G3DSA:1.25.40.10 20 121 1.1E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 SUPERFAMILY SSF48452 39 132 1.19E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.84 T 29-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 Gene3D G3DSA:1.25.40.10 122 159 3.8E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS18240 3d65ed2ce27adab6d74209b199405f13 389 Gene3D G3DSA:1.25.40.10 160 364 2.9E-18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS23185 42715ff20cbe70b4d9cd91274105cf59 203 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 181 2.6E-60 T 29-03-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS23185 42715ff20cbe70b4d9cd91274105cf59 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 2.0E-54 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS23185 42715ff20cbe70b4d9cd91274105cf59 203 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM460_RS23185 42715ff20cbe70b4d9cd91274105cf59 203 Gene3D G3DSA:3.40.50.1240 1 200 1.9E-52 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS23185 42715ff20cbe70b4d9cd91274105cf59 203 PIRSF PIRSF000709 1 185 1.5E-16 T 29-03-2018 AM460_RS23185 42715ff20cbe70b4d9cd91274105cf59 203 SUPERFAMILY SSF53254 1 195 2.09E-56 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS23185 42715ff20cbe70b4d9cd91274105cf59 203 SMART SM00855 2 156 3.2E-21 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS10170 1bfb90f9e8ba26990605d9c7ce2db670 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 2.9E-123 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM460_RS10170 1bfb90f9e8ba26990605d9c7ce2db670 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 3.2E-131 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 SUPERFAMILY SSF50331 250 364 1.36E-7 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 Pfam PF00005 ABC transporter 35 174 3.2E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 5.1E-169 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 SMART SM00382 42 225 5.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 Pfam PF08402 TOBE domain 292 372 2.3E-8 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 SUPERFAMILY SSF52540 17 258 3.08E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19930 8298de0c0cef9ebec11bfe5447380d15 378 Gene3D G3DSA:3.40.50.300 3 258 8.8E-74 T 29-03-2018 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 Gene3D G3DSA:3.40.50.300 8 280 1.8E-36 T 29-03-2018 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 SUPERFAMILY SSF50447 262 393 2.03E-27 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 Gene3D G3DSA:3.30.70.870 394 469 8.9E-11 T 29-03-2018 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.615 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.3E-46 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.6E-11 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 Gene3D G3DSA:2.40.30.10 281 387 1.0E-21 T 29-03-2018 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 156 1.5E-18 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.5E-47 T 29-03-2018 IPR032090 Peptide chain release factor 3, C-terminal AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 SUPERFAMILY SSF52540 10 277 8.73E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00525 8c90c0cef6706a2004594723465e19fe 529 SUPERFAMILY SSF54980 393 468 1.29E-17 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS22550 510c3cdc082062ee1c6b75957d0917cd 346 Pfam PF01263 Aldose 1-epimerase 17 342 8.0E-91 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM460_RS22550 510c3cdc082062ee1c6b75957d0917cd 346 PIRSF PIRSF005096 2 346 2.4E-128 T 29-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM460_RS22550 510c3cdc082062ee1c6b75957d0917cd 346 Gene3D G3DSA:2.70.98.10 7 346 2.6E-104 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS22550 510c3cdc082062ee1c6b75957d0917cd 346 SUPERFAMILY SSF74650 5 343 2.57E-107 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS22550 510c3cdc082062ee1c6b75957d0917cd 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 29-03-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM460_RS22550 510c3cdc082062ee1c6b75957d0917cd 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 343 1.1E-149 T 29-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 180 2.1E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 Gene3D G3DSA:2.40.170.20 194 749 1.7E-93 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 Gene3D G3DSA:2.170.130.10 30 193 9.9E-28 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 732 749 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 SUPERFAMILY SSF56935 68 749 7.79E-144 T 29-03-2018 AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 749 1.2E-189 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS25555 391eaa13d6ad625fe77a9cb11ec87e90 749 Pfam PF00593 TonB dependent receptor 272 748 3.4E-63 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 Gene3D G3DSA:3.40.50.1000 79 196 1.6E-23 T 29-03-2018 IPR023214 HAD-like domain AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 SUPERFAMILY SSF56784 3 194 4.06E-45 T 29-03-2018 IPR023214 HAD-like domain AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 Gene3D G3DSA:1.10.150.240 18 78 1.4E-20 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 184 9.3E-21 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.2E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 1.2E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.2E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.2E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS03685 0808bea115b6d864e37f03b839abbfb8 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 50 184 5.1E-13 T 29-03-2018 IPR023214 HAD-like domain AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 SUPERFAMILY SSF54862 59 204 9.0E-26 T 29-03-2018 AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 189 223 0.009 T 29-03-2018 AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 31 69 4.6E-6 T 29-03-2018 AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 117 156 6.3E-9 T 29-03-2018 AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12838 4Fe-4S dicluster domain 60 115 2.1E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 10 216 3.5E-71 T 29-03-2018 IPR004494 MauM/NapG ferredoxin-type protein AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 157 188 2.1E-7 T 29-03-2018 AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 70 116 1.4E-10 T 29-03-2018 AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 183 196 0.2 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13310 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 136 155 0.039 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS23445 bf01fb11dee4269063443e87b05b3466 334 Gene3D G3DSA:1.10.3470.10 5 334 1.4E-59 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS23445 bf01fb11dee4269063443e87b05b3466 334 Pfam PF01032 FecCD transport family 19 328 5.4E-90 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS23445 bf01fb11dee4269063443e87b05b3466 334 SUPERFAMILY SSF81345 9 328 1.7E-74 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 PIRSF PIRSF003128 1 553 4.1E-159 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 4.6E-174 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 SUPERFAMILY SSF52540 4 50 1.97E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 SUPERFAMILY SSF52540 284 507 1.97E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 1.0E-18 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 SUPERFAMILY SSF52540 1 217 2.23E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 Gene3D G3DSA:3.40.50.300 227 533 6.3E-19 T 29-03-2018 AM460_RS11300 1f624211a056f82d955a4eda7f1a5cd1 553 Gene3D G3DSA:3.40.50.300 1 226 6.5E-26 T 29-03-2018 AM460_RS21540 f91bee967160023a60f36b0b9aa75b3b 287 Gene3D G3DSA:1.20.1630.10 3 285 2.4E-44 T 29-03-2018 AM460_RS21540 f91bee967160023a60f36b0b9aa75b3b 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 2.3E-115 T 29-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM460_RS03320 41c745e1144737d3a54930399d749fd8 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 1.8E-21 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS03320 41c745e1144737d3a54930399d749fd8 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 3.3E-41 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM460_RS03320 41c745e1144737d3a54930399d749fd8 106 SUPERFAMILY SSF52794 3 101 1.71E-35 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS03320 41c745e1144737d3a54930399d749fd8 106 Gene3D G3DSA:3.40.50.2300 3 102 6.7E-41 T 29-03-2018 AM460_RS01075 331635123fdd0fc74d4e72d7adddc07b 49 Pfam PF05321 Haemolysin expression modulating protein 1 46 6.0E-21 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS01075 331635123fdd0fc74d4e72d7adddc07b 49 SUPERFAMILY SSF68989 1 48 2.09E-21 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS01075 331635123fdd0fc74d4e72d7adddc07b 49 Gene3D G3DSA:1.20.1280.40 1 48 3.1E-22 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS25155 8b01cf80d24c007da23cb765baabe709 90 Pfam PF01313 Bacterial export proteins, family 3 8 77 5.9E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS25155 8b01cf80d24c007da23cb765baabe709 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 5.1E-15 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS25155 8b01cf80d24c007da23cb765baabe709 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 5.1E-15 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS25155 8b01cf80d24c007da23cb765baabe709 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 5.1E-15 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS25155 8b01cf80d24c007da23cb765baabe709 90 PIRSF PIRSF004669 2 90 1.3E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM460_RS13110 d2e519eda90105d09cfafc4c6bfc8485 331 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 273 4.4E-45 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM460_RS13110 d2e519eda90105d09cfafc4c6bfc8485 331 Gene3D G3DSA:1.25.40.10 174 326 8.7E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS13110 d2e519eda90105d09cfafc4c6bfc8485 331 Pfam PF04754 Putative transposase, YhgA-like 8 209 5.5E-87 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like AM460_RS21675 a181a3cec06401c677c83f9ac08fc012 350 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 17 344 5.1E-74 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM460_RS21675 a181a3cec06401c677c83f9ac08fc012 350 Pfam PF05125 Phage major capsid protein, P2 family 16 342 2.5E-113 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 Gene3D G3DSA:1.10.10.60 4 71 2.3E-15 T 29-03-2018 AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 66 1.2E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 Pfam PF16925 Bacterial transcriptional repressor C-terminal 93 206 1.6E-39 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 SUPERFAMILY SSF46689 12 88 1.59E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 4.4E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 4.4E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 SUPERFAMILY SSF48498 93 202 1.15E-21 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS01215 3efabcf750f4ad5cb8b64fba85dea37e 218 Gene3D G3DSA:1.10.357.10 72 205 5.8E-14 T 29-03-2018 AM460_RS00145 0eacfb27c9737623b5f9af63b7d88e62 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM460_RS00145 0eacfb27c9737623b5f9af63b7d88e62 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 64.959 T 29-03-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 AM460_RS00145 0eacfb27c9737623b5f9af63b7d88e62 215 SUPERFAMILY SSF53254 1 208 3.8E-58 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS00145 0eacfb27c9737623b5f9af63b7d88e62 215 Gene3D G3DSA:3.40.50.1240 1 213 6.8E-54 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS00145 0eacfb27c9737623b5f9af63b7d88e62 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 2.7E-57 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS00145 0eacfb27c9737623b5f9af63b7d88e62 215 SMART SM00855 3 157 4.6E-24 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS00145 0eacfb27c9737623b5f9af63b7d88e62 215 PIRSF PIRSF000709 2 167 9.8E-10 T 29-03-2018 AM460_RS02635 a1d3ef1db1bf00401b47f94640f8bb02 138 SUPERFAMILY SSF111038 1 138 3.53E-46 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM460_RS02635 a1d3ef1db1bf00401b47f94640f8bb02 138 PIRSF PIRSF004681 1 138 1.3E-42 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM460_RS02635 a1d3ef1db1bf00401b47f94640f8bb02 138 Gene3D G3DSA:2.60.120.460 1 138 1.4E-57 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM460_RS02635 a1d3ef1db1bf00401b47f94640f8bb02 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 138 1.0E-53 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM460_RS02635 a1d3ef1db1bf00401b47f94640f8bb02 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 133 1.3E-34 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM460_RS02635 a1d3ef1db1bf00401b47f94640f8bb02 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM460_RS03100 69a8b46dd799ffe656a0964bf3775274 377 SUPERFAMILY SSF102114 36 363 3.92E-52 T 29-03-2018 AM460_RS03100 69a8b46dd799ffe656a0964bf3775274 377 Pfam PF04055 Radical SAM superfamily 82 220 9.7E-9 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS03100 69a8b46dd799ffe656a0964bf3775274 377 Gene3D G3DSA:3.20.20.70 18 370 3.3E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03100 69a8b46dd799ffe656a0964bf3775274 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 4.1E-160 T 29-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AM460_RS03100 69a8b46dd799ffe656a0964bf3775274 377 SMART SM00876 258 361 1.5E-26 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM460_RS03100 69a8b46dd799ffe656a0964bf3775274 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 2.0E-20 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM460_RS01790 b425b6cc7206fc46293687598a5b584c 249 SUPERFAMILY SSF53474 9 249 2.16E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS01790 b425b6cc7206fc46293687598a5b584c 249 Pfam PF00326 Prolyl oligopeptidase family 86 234 2.9E-11 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM460_RS01790 b425b6cc7206fc46293687598a5b584c 249 Gene3D G3DSA:3.40.50.1820 2 249 1.6E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS13215 8e8f1b678b8d4e519f7866bddd1ddaa5 220 Pfam PF01144 Coenzyme A transferase 6 215 8.3E-71 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS13215 8e8f1b678b8d4e519f7866bddd1ddaa5 220 SMART SM00882 5 216 2.2E-72 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS13215 8e8f1b678b8d4e519f7866bddd1ddaa5 220 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 6 217 3.4E-65 T 29-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AM460_RS13215 8e8f1b678b8d4e519f7866bddd1ddaa5 220 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 29-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM460_RS13215 8e8f1b678b8d4e519f7866bddd1ddaa5 220 SUPERFAMILY SSF100950 2 217 1.07E-76 T 29-03-2018 AM460_RS13215 8e8f1b678b8d4e519f7866bddd1ddaa5 220 Gene3D G3DSA:3.40.1080.10 1 220 2.1E-75 T 29-03-2018 AM460_RS07770 2c25f8c3f69a93988153ec5f5be1b7ce 144 Pfam PF03610 PTS system fructose IIA component 4 113 2.0E-27 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS07770 2c25f8c3f69a93988153ec5f5be1b7ce 144 SUPERFAMILY SSF53062 1 126 1.44E-34 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS07770 2c25f8c3f69a93988153ec5f5be1b7ce 144 Gene3D G3DSA:3.40.50.510 1 142 3.7E-32 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS14080 8cb5b76b9f2f82cb515c9772deaec19a 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 292 6.1E-98 T 29-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AM460_RS14080 8cb5b76b9f2f82cb515c9772deaec19a 299 Gene3D G3DSA:3.90.25.10 172 203 2.7E-7 T 29-03-2018 AM460_RS14080 8cb5b76b9f2f82cb515c9772deaec19a 299 Gene3D G3DSA:3.40.50.720 1 171 2.7E-19 T 29-03-2018 AM460_RS14080 8cb5b76b9f2f82cb515c9772deaec19a 299 SUPERFAMILY SSF51735 1 294 4.96E-103 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14080 8cb5b76b9f2f82cb515c9772deaec19a 299 Pfam PF04321 RmlD substrate binding domain 1 293 9.1E-109 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AM460_RS14080 8cb5b76b9f2f82cb515c9772deaec19a 299 Gene3D G3DSA:3.90.25.10 204 279 9.8E-22 T 29-03-2018 AM460_RS16180 4251deb9aa763b913725cbacba3d2c63 183 SUPERFAMILY SSF55469 1 168 1.44E-40 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS16180 4251deb9aa763b913725cbacba3d2c63 183 Pfam PF00881 Nitroreductase family 9 161 4.7E-27 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM460_RS16180 4251deb9aa763b913725cbacba3d2c63 183 Gene3D G3DSA:3.40.109.10 1 183 1.1E-34 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS16180 4251deb9aa763b913725cbacba3d2c63 183 PIRSF PIRSF000232 1 182 3.6E-71 T 29-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AM460_RS00830 93a04fa9193fc6388a97da28ab1c12e6 300 SUPERFAMILY SSF49401 22 179 2.73E-70 T 29-03-2018 IPR008966 Adhesion domain AM460_RS00830 93a04fa9193fc6388a97da28ab1c12e6 300 Gene3D G3DSA:2.60.40.1090 22 175 1.4E-63 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS00830 93a04fa9193fc6388a97da28ab1c12e6 300 Pfam PF09160 FimH, mannose binding 24 168 4.4E-65 T 29-03-2018 IPR015243 FimH, mannose-binding domain AM460_RS00830 93a04fa9193fc6388a97da28ab1c12e6 300 Pfam PF00419 Fimbrial protein 176 300 1.4E-9 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS00830 93a04fa9193fc6388a97da28ab1c12e6 300 SUPERFAMILY SSF49401 181 300 2.29E-27 T 29-03-2018 IPR008966 Adhesion domain AM460_RS00830 93a04fa9193fc6388a97da28ab1c12e6 300 Gene3D G3DSA:2.60.40.1090 176 300 6.2E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS06135 a554f50dbc6f805da67d3079a60402df 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 2.3E-10 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM460_RS06135 a554f50dbc6f805da67d3079a60402df 255 SMART SM00382 30 230 6.6E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06135 a554f50dbc6f805da67d3079a60402df 255 Pfam PF00005 ABC transporter 21 181 3.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS06135 a554f50dbc6f805da67d3079a60402df 255 Gene3D G3DSA:3.40.50.300 1 253 1.1E-56 T 29-03-2018 AM460_RS06135 a554f50dbc6f805da67d3079a60402df 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS06135 a554f50dbc6f805da67d3079a60402df 255 SUPERFAMILY SSF52540 4 253 9.71E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 Pfam PF12848 ABC transporter 224 309 6.2E-21 T 29-03-2018 IPR032781 ABC-transporter extension domain AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 Pfam PF00005 ABC transporter 18 184 1.9E-19 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 Pfam PF00005 ABC transporter 336 467 5.1E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 SUPERFAMILY SSF52540 6 237 6.73E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 SMART SM00382 26 228 7.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 SMART SM00382 344 521 1.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 Gene3D G3DSA:3.40.50.300 283 530 2.4E-50 T 29-03-2018 AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 Gene3D G3DSA:3.40.50.300 3 282 1.6E-51 T 29-03-2018 AM460_RS22210 a4a654b4e89c024c3efdd151385ebf54 530 SUPERFAMILY SSF52540 298 523 1.56E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06680 c43be483346ab64b86ac46b5009ec176 270 Gene3D G3DSA:1.10.287.460 26 133 8.5E-29 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM460_RS06680 c43be483346ab64b86ac46b5009ec176 270 SUPERFAMILY SSF54534 41 249 2.36E-65 T 29-03-2018 AM460_RS06680 c43be483346ab64b86ac46b5009ec176 270 Gene3D G3DSA:3.10.50.40 134 250 6.2E-44 T 29-03-2018 AM460_RS06680 c43be483346ab64b86ac46b5009ec176 270 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 152 7.9E-36 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM460_RS06680 c43be483346ab64b86ac46b5009ec176 270 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 246 9.1E-29 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM460_RS23605 68d01f1d164c66692323b1a27a1fe5be 110 Pfam PF11604 Copper binding periplasmic protein CusF 42 103 1.0E-21 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF AM460_RS04250 b7d76c77f5a577c36c796f4a525396a0 293 Gene3D G3DSA:3.90.550.10 1 292 4.4E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS04250 b7d76c77f5a577c36c796f4a525396a0 293 SUPERFAMILY SSF53448 1 286 4.28E-92 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS04250 b7d76c77f5a577c36c796f4a525396a0 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.5E-72 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM460_RS04250 b7d76c77f5a577c36c796f4a525396a0 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.5E-161 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 Pfam PF04851 Type III restriction enzyme, res subunit 286 458 1.6E-21 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 SUPERFAMILY SSF52540 602 711 5.31E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 SUPERFAMILY SSF52540 309 365 5.31E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 SUPERFAMILY SSF52540 259 512 2.06E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 Gene3D G3DSA:3.40.50.300 538 771 1.4E-7 T 29-03-2018 AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 Gene3D G3DSA:3.40.50.300 284 469 7.8E-13 T 29-03-2018 AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 178 3.3E-24 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AM460_RS25025 24607cafb870d9748706f04b0cc0b4a5 1032 SMART SM00487 283 495 1.2E-4 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS07025 272272dcbef247a38b1f7ab7b0f4df60 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 119 6.4E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS07025 272272dcbef247a38b1f7ab7b0f4df60 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 169 202 2.5E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS07025 272272dcbef247a38b1f7ab7b0f4df60 256 Gene3D G3DSA:2.160.10.10 74 256 1.3E-41 T 29-03-2018 AM460_RS07025 272272dcbef247a38b1f7ab7b0f4df60 256 SUPERFAMILY SSF51161 78 248 2.77E-45 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS05760 e1312420412aa2874eb17739de4e32f7 385 SUPERFAMILY SSF111369 50 296 7.19E-81 T 29-03-2018 AM460_RS05760 e1312420412aa2874eb17739de4e32f7 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 369 7.9E-80 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS05760 e1312420412aa2874eb17739de4e32f7 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 289 6.9E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS05760 e1312420412aa2874eb17739de4e32f7 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 356 1.3E-9 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS05760 e1312420412aa2874eb17739de4e32f7 385 Gene3D G3DSA:1.20.1600.10 82 303 1.4E-32 T 29-03-2018 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 138 159 - T 29-03-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 50 177 2.7E-40 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 16 600 72.701 T 29-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 211 600 41.858 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 105 160 1.0E-26 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 SUPERFAMILY SSF56762 225 600 4.45E-119 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 25 185 25.255 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 329 600 1.1E-101 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 215 600 5.6E-178 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 SUPERFAMILY SSF143243 25 229 1.24E-58 T 29-03-2018 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 252 263 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 49 176 4.0E-45 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 Gene3D G3DSA:1.10.645.10 213 385 1.4E-44 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12910 1aa814280e68da2d437cf8bfe94a7a78 600 Gene3D G3DSA:1.10.645.10 389 596 1.4E-31 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 Pfam PF01327 Polypeptide deformylase 4 152 1.5E-50 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 Gene3D G3DSA:3.90.45.10 1 169 6.7E-62 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 32.054 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.9E-66 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 PIRSF PIRSF004749 1 168 4.1E-55 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 SUPERFAMILY SSF56420 3 164 1.02E-61 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-38 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-38 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-38 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS06990 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-38 T 29-03-2018 IPR023635 Peptide deformylase AM460_RS19080 4ca305ae785c9f3db754189b9d6f1461 391 Pfam PF00589 Phage integrase family 204 367 1.9E-19 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS19080 4ca305ae785c9f3db754189b9d6f1461 391 Gene3D G3DSA:1.10.150.130 87 200 3.5E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS19080 4ca305ae785c9f3db754189b9d6f1461 391 Gene3D G3DSA:1.10.443.10 201 382 2.4E-26 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS19080 4ca305ae785c9f3db754189b9d6f1461 391 SUPERFAMILY SSF56349 97 377 7.3E-56 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS19080 4ca305ae785c9f3db754189b9d6f1461 391 Pfam PF13356 Arm DNA-binding domain 2 85 7.1E-20 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM460_RS03700 6b4d165e7d391722111699cd719d7e55 477 SUPERFAMILY SSF103473 30 464 3.27E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS03700 6b4d165e7d391722111699cd719d7e55 477 Gene3D G3DSA:1.20.1250.20 251 477 5.2E-17 T 29-03-2018 AM460_RS03700 6b4d165e7d391722111699cd719d7e55 477 Gene3D G3DSA:1.20.1250.20 27 232 5.4E-25 T 29-03-2018 AM460_RS03700 6b4d165e7d391722111699cd719d7e55 477 Pfam PF00083 Sugar (and other) transporter 72 453 1.3E-29 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS15340 85295ec8f448e6b011f640769795c95b 344 Gene3D G3DSA:3.90.1690.10 1 344 2.5E-61 T 29-03-2018 AM460_RS15340 85295ec8f448e6b011f640769795c95b 344 Pfam PF03864 Phage major capsid protein E 5 342 1.7E-61 T 29-03-2018 IPR005564 Major capsid protein GpE GO:0019028 AM460_RS12345 4cc6367ba3526a3be10334ec7067599c 114 Pfam PF07037 Putative transcription regulator (DUF1323) 1 113 2.1E-49 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 AM460_RS12345 4cc6367ba3526a3be10334ec7067599c 114 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 1 114 9.0E-61 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 AM460_RS12345 4cc6367ba3526a3be10334ec7067599c 114 SUPERFAMILY SSF46955 1 57 1.28E-12 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS12345 4cc6367ba3526a3be10334ec7067599c 114 Gene3D G3DSA:1.10.10.10 1 59 3.2E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17565 16d56d480f482acb4b1cd713f043dc08 297 PIRSF PIRSF016184 1 295 4.6E-95 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM460_RS17565 16d56d480f482acb4b1cd713f043dc08 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 295 5.0E-131 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM460_RS17565 16d56d480f482acb4b1cd713f043dc08 297 Gene3D G3DSA:3.10.310.10 127 284 1.6E-32 T 29-03-2018 AM460_RS17565 16d56d480f482acb4b1cd713f043dc08 297 Pfam PF02567 Phenazine biosynthesis-like protein 8 290 1.7E-90 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM460_RS17565 16d56d480f482acb4b1cd713f043dc08 297 SUPERFAMILY SSF54506 1 294 1.03E-66 T 29-03-2018 AM460_RS17565 16d56d480f482acb4b1cd713f043dc08 297 Gene3D G3DSA:3.10.310.10 2 126 2.9E-28 T 29-03-2018 AM460_RS11085 2ddc538e450a39aeec49458e1b6f4f2c 164 SUPERFAMILY SSF46785 16 105 4.58E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11085 2ddc538e450a39aeec49458e1b6f4f2c 164 Pfam PF06069 PerC transcriptional activator 100 153 2.4E-9 T 29-03-2018 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 AM460_RS11085 2ddc538e450a39aeec49458e1b6f4f2c 164 Gene3D G3DSA:1.10.10.10 2 133 2.3E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11085 2ddc538e450a39aeec49458e1b6f4f2c 164 ProDom PD096295 YFDN SB43 ORF40 3 164 8.0E-90 T 29-03-2018 IPR020344 Bacteriophage SfV, Orf40 AM460_RS22040 6ce61e826b17c7c70a5e13980790f51c 158 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 1.1E-16 T 29-03-2018 IPR019660 Putative sensory transduction regulator YbjN AM460_RS16300 022800877914d612f2c3b0559e332165 191 Gene3D G3DSA:2.60.120.10 6 108 1.3E-29 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS16300 022800877914d612f2c3b0559e332165 191 SUPERFAMILY SSF51182 1 182 2.22E-44 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS16300 022800877914d612f2c3b0559e332165 191 Hamap MF_01591 Protein Ves [ves]. 1 191 58.94 T 29-03-2018 IPR023482 Uncharacterised protein family Ves AM460_RS16300 022800877914d612f2c3b0559e332165 191 Pfam PF05962 HutD 5 175 3.3E-42 T 29-03-2018 IPR010282 Uncharacterised protein family HutD/Ves AM460_RS16300 022800877914d612f2c3b0559e332165 191 Gene3D G3DSA:2.60.120.10 109 179 0.0025 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS03805 45589e0d6140d039b9ea5e4c18478b35 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.4E-46 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 AM460_RS03805 45589e0d6140d039b9ea5e4c18478b35 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-44 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 5.9E-151 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.40.50.720 5 41 0.0046 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 SUPERFAMILY SSF51905 2 338 6.17E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 3.8E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.50.50.60 118 237 1.8E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.30.390.30 340 462 4.9E-38 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 SUPERFAMILY SSF55424 343 466 8.42E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PIRSF PIRSF000350 1 468 1.1E-87 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.5E-35 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-69 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:1.10.287.990 42 107 2.1E-20 T 29-03-2018 AM460_RS25760 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.50.50.60 238 339 5.8E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS21025 b765820bd7eb5c46936288a5696d7ed3 176 Gene3D G3DSA:1.20.5.170 1 87 5.5E-10 T 29-03-2018 AM460_RS21025 b765820bd7eb5c46936288a5696d7ed3 176 SUPERFAMILY SSF161266 19 170 1.57E-45 T 29-03-2018 AM460_RS21025 b765820bd7eb5c46936288a5696d7ed3 176 Pfam PF07352 Bacteriophage Mu Gam like protein 24 169 6.6E-40 T 29-03-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 AM460_RS21965 60431cff794b18d2281c49e9f0d92852 276 SMART SM00644 32 178 8.0E-43 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS21965 60431cff794b18d2281c49e9f0d92852 276 Gene3D G3DSA:3.40.80.10 42 192 6.8E-43 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS21965 60431cff794b18d2281c49e9f0d92852 276 SUPERFAMILY SSF55846 24 194 1.7E-52 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS21965 60431cff794b18d2281c49e9f0d92852 276 SUPERFAMILY SSF47090 198 273 3.3E-21 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS21965 60431cff794b18d2281c49e9f0d92852 276 Gene3D G3DSA:1.10.101.10 193 276 3.4E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM460_RS21965 60431cff794b18d2281c49e9f0d92852 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 42 179 1.1E-25 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 SUPERFAMILY SSF55347 614 798 3.6E-52 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Pfam PF13840 ACT domain 393 453 6.4E-8 T 29-03-2018 IPR027795 GATS-like ACT domain AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Pfam PF01842 ACT domain 324 376 7.3E-8 T 29-03-2018 IPR002912 ACT domain AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Pfam PF00696 Amino acid kinase family 2 284 6.3E-46 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 SUPERFAMILY SSF53633 1 296 1.57E-73 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Gene3D G3DSA:3.40.1160.10 1 288 1.3E-63 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Gene3D G3DSA:3.30.70.260 289 383 1.4E-24 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 PIRSF PIRSF000727 1 818 0.0 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.5E-33 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 SUPERFAMILY SSF55021 303 381 1.68E-22 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Pfam PF00742 Homoserine dehydrogenase 614 811 2.4E-48 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 SUPERFAMILY SSF51735 464 636 3.73E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Gene3D G3DSA:3.30.70.260 384 464 4.4E-19 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Gene3D G3DSA:3.40.50.720 465 635 2.9E-30 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 Gene3D G3DSA:3.30.360.10 636 794 1.2E-53 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 SUPERFAMILY SSF55021 383 476 7.63E-22 T 29-03-2018 AM460_RS00095 3729a5a29364447679d3f19c5aa7adb9 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.0E-152 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS05175 868110d7dacec8dd452ebdeecdb0e6f7 319 SUPERFAMILY SSF88713 24 238 5.89E-71 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS05175 868110d7dacec8dd452ebdeecdb0e6f7 319 Gene3D G3DSA:3.20.20.370 18 241 6.8E-79 T 29-03-2018 AM460_RS05175 868110d7dacec8dd452ebdeecdb0e6f7 319 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 1.3E-73 T 29-03-2018 IPR006837 Divergent polysaccharide deacetylase AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 SUPERFAMILY SSF103473 11 402 1.05E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 348 371 9.9E-12 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 87 111 9.9E-12 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 114 135 9.9E-12 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 313 333 9.9E-12 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 25 41 9.9E-12 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 144 166 9.9E-12 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 Pfam PF07690 Major Facilitator Superfamily 20 263 5.5E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 Gene3D G3DSA:1.20.1250.20 205 408 1.6E-27 T 29-03-2018 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 Gene3D G3DSA:1.20.1250.20 11 204 9.4E-38 T 29-03-2018 AM460_RS20300 faf856f858dfd8160981e3ccce301101 408 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 3 406 49.348 T 29-03-2018 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 AM460_RS08390 494460408448b3122703110f76f22d08 104 SUPERFAMILY SSF54909 1 100 8.05E-31 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS08390 494460408448b3122703110f76f22d08 104 Gene3D G3DSA:3.30.70.100 1 101 5.4E-21 T 29-03-2018 AM460_RS08390 494460408448b3122703110f76f22d08 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 6.2E-29 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM460_RS06255 ae46ffa1d4de341a02cb689fd43d4cb2 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS06255 ae46ffa1d4de341a02cb689fd43d4cb2 815 Gene3D G3DSA:3.40.50.2000 7 479 3.0E-198 T 29-03-2018 AM460_RS06255 ae46ffa1d4de341a02cb689fd43d4cb2 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS06255 ae46ffa1d4de341a02cb689fd43d4cb2 815 SUPERFAMILY SSF53756 9 814 0.0 T 29-03-2018 AM460_RS06255 ae46ffa1d4de341a02cb689fd43d4cb2 815 Gene3D G3DSA:3.40.50.2000 480 795 7.5E-144 T 29-03-2018 AM460_RS06255 ae46ffa1d4de341a02cb689fd43d4cb2 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS06255 ae46ffa1d4de341a02cb689fd43d4cb2 815 PIRSF PIRSF000460 2 815 1.6E-235 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM460_RS19710 7a2ab16871c744874597db0ec5833ead 126 SUPERFAMILY SSF74653 43 108 1.31E-16 T 29-03-2018 AM460_RS19710 7a2ab16871c744874597db0ec5833ead 126 PRINTS PR01374 Gram-negative bacterial tonB protein signature 46 67 1.9E-12 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM460_RS19710 7a2ab16871c744874597db0ec5833ead 126 PRINTS PR01374 Gram-negative bacterial tonB protein signature 67 85 1.9E-12 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM460_RS19710 7a2ab16871c744874597db0ec5833ead 126 PRINTS PR01374 Gram-negative bacterial tonB protein signature 86 103 1.9E-12 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM460_RS19710 7a2ab16871c744874597db0ec5833ead 126 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 52 122 7.9E-13 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM460_RS19710 7a2ab16871c744874597db0ec5833ead 126 Gene3D G3DSA:3.30.1150.10 36 125 1.1E-15 T 29-03-2018 AM460_RS19710 7a2ab16871c744874597db0ec5833ead 126 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 51 110 8.3E-12 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM460_RS01680 fd29072a666b4ab988ec62c0a059b298 280 Gene3D G3DSA:3.20.20.150 6 280 2.4E-40 T 29-03-2018 AM460_RS01680 fd29072a666b4ab988ec62c0a059b298 280 Pfam PF01261 Xylose isomerase-like TIM barrel 29 233 4.5E-26 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS01680 fd29072a666b4ab988ec62c0a059b298 280 SUPERFAMILY SSF51658 1 258 2.09E-50 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS08405 9e84e58261dc8201c56885ceaac9be56 110 ProDom PD072223 MEMBRANE INNER YGIZ TRANSMEMBRANE 3 109 2.0E-43 T 29-03-2018 AM460_RS08405 9e84e58261dc8201c56885ceaac9be56 110 Pfam PF10840 Protein of unknown function (DUF2645) 13 109 1.2E-11 T 29-03-2018 IPR022553 Protein of unknown function DUF2645 AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 Pfam PF01012 Electron transfer flavoprotein domain 42 169 8.2E-15 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 SMART SM00893 7 180 2.9E-14 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 SUPERFAMILY SSF52467 190 310 2.81E-41 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 Hamap MF_01056 Protein FixB [fixB]. 1 313 59.356 T 29-03-2018 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 PIRSF PIRSF000089 3 313 5.0E-86 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 Gene3D G3DSA:3.40.50.620 2 181 6.8E-24 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 Gene3D G3DSA:3.40.50.1220 186 313 3.8E-48 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 274 8.8E-30 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AM460_RS26200 c970a575798cb0d03e97e12083606df7 313 SUPERFAMILY SSF52402 7 169 8.37E-23 T 29-03-2018 AM460_RS18660 c38bbb44c19aa1f5ee091e56cbeba9e7 351 SMART SM00507 265 314 7.5E-6 T 29-03-2018 IPR003615 HNH nuclease AM460_RS18660 c38bbb44c19aa1f5ee091e56cbeba9e7 351 Pfam PF06147 Protein of unknown function (DUF968) 131 341 6.8E-64 T 29-03-2018 IPR010373 Protein of unknown function DUF968 AM460_RS18660 c38bbb44c19aa1f5ee091e56cbeba9e7 351 Gene3D G3DSA:3.30.50.20 274 345 2.9E-16 T 29-03-2018 AM460_RS25300 27e6665aa82f2e15b85e41e94f34145b 190 SUPERFAMILY SSF56784 3 185 4.96E-53 T 29-03-2018 IPR023214 HAD-like domain AM460_RS25300 27e6665aa82f2e15b85e41e94f34145b 190 Pfam PF13242 HAD-hyrolase-like 109 179 2.5E-12 T 29-03-2018 AM460_RS25300 27e6665aa82f2e15b85e41e94f34145b 190 Gene3D G3DSA:3.40.50.1000 4 190 4.7E-34 T 29-03-2018 IPR023214 HAD-like domain AM460_RS25300 27e6665aa82f2e15b85e41e94f34145b 190 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 3.0E-100 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM460_RS25300 27e6665aa82f2e15b85e41e94f34145b 190 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 155 8.0E-38 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM460_RS25300 27e6665aa82f2e15b85e41e94f34145b 190 PIRSF PIRSF004682 1 189 9.6E-67 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM460_RS25300 27e6665aa82f2e15b85e41e94f34145b 190 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 154 8.7E-39 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Gene3D G3DSA:3.30.470.20 562 696 3.9E-23 T 29-03-2018 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 SUPERFAMILY SSF52210 287 447 6.41E-38 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Pfam PF13549 ATP-grasp domain 472 694 3.1E-74 T 29-03-2018 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 SUPERFAMILY SSF55729 707 866 4.88E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Gene3D G3DSA:3.40.630.30 716 886 4.8E-24 T 29-03-2018 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 SUPERFAMILY SSF52210 125 286 9.68E-36 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Gene3D G3DSA:3.40.50.261 285 452 5.4E-34 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Pfam PF13380 CoA binding domain 13 129 1.9E-21 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 3.3E-46 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 SMART SM00881 9 104 8.2E-24 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Gene3D G3DSA:3.30.1490.20 500 561 1.4E-25 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Gene3D G3DSA:3.40.50.720 9 126 2.4E-30 T 29-03-2018 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Pfam PF00583 Acetyltransferase (GNAT) family 759 863 9.8E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 Gene3D G3DSA:3.40.50.261 127 284 5.2E-40 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 SUPERFAMILY SSF56059 481 687 1.14E-27 T 29-03-2018 AM460_RS11465 12d2f1469eec44d2e4a2b16473c11d7d 886 SUPERFAMILY SSF51735 2 136 1.58E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS12915 f71f2fb7813aea0d11f312f70d3c5464 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12915 f71f2fb7813aea0d11f312f70d3c5464 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 7.2E-53 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12915 f71f2fb7813aea0d11f312f70d3c5464 166 SUPERFAMILY SSF52833 15 165 3.91E-51 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS12915 f71f2fb7813aea0d11f312f70d3c5464 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 166 3.9E-51 T 29-03-2018 AM460_RS12915 f71f2fb7813aea0d11f312f70d3c5464 166 Gene3D G3DSA:3.40.30.10 84 166 2.0E-14 T 29-03-2018 AM460_RS12915 f71f2fb7813aea0d11f312f70d3c5464 166 PIRSF PIRSF000216 1 166 7.9E-54 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS15335 70818465a7330976bc185792536c3f4a 109 SUPERFAMILY SSF51274 10 108 2.09E-34 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 AM460_RS15335 70818465a7330976bc185792536c3f4a 109 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 32 108 6.0E-12 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 AM460_RS15335 70818465a7330976bc185792536c3f4a 109 Gene3D G3DSA:2.40.300.10 1 109 1.4E-15 T 29-03-2018 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 Pfam PF08245 Mur ligase middle domain 124 304 5.8E-28 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 418 1.7E-19 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 9.3E-30 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 SUPERFAMILY SSF53244 323 476 2.56E-44 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 5.3E-184 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 Gene3D G3DSA:3.40.1190.10 108 324 6.3E-56 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.416 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 SUPERFAMILY SSF51984 20 106 2.88E-29 T 29-03-2018 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 SUPERFAMILY SSF53623 105 322 8.11E-75 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 Gene3D G3DSA:3.90.190.20 325 480 2.4E-34 T 29-03-2018 AM460_RS25925 0c936d6e0372a01ed9ea038b7bfd5656 491 Gene3D G3DSA:3.40.50.720 1 107 5.1E-18 T 29-03-2018 AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 Pfam PF00664 ABC transporter transmembrane region 58 287 1.4E-10 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 Gene3D G3DSA:1.20.1560.10 1 326 5.9E-32 T 29-03-2018 AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 SUPERFAMILY SSF52540 333 569 9.12E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 SUPERFAMILY SSF90123 7 322 1.83E-41 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 SMART SM00382 365 549 6.6E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 Pfam PF00005 ABC transporter 356 502 3.6E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 Gene3D G3DSA:3.40.50.300 327 571 5.1E-71 T 29-03-2018 AM460_RS21860 718cf9288de53f57dc42f1338d8abc47 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.4E-180 T 29-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 1.8E-51 T 29-03-2018 IPR023214 HAD-like domain AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 29-03-2018 AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 SUPERFAMILY SSF56784 1 262 1.5E-60 T 29-03-2018 IPR023214 HAD-like domain AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 Gene3D G3DSA:3.40.50.1000 1 266 7.6E-30 T 29-03-2018 IPR023214 HAD-like domain AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 3.3E-46 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 63.244 T 29-03-2018 IPR023938 HMP-PP phosphatase GO:0016818 AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 AM460_RS24135 a84db6ec329e2f5d5b1389f6f163de1c 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.1E-62 T 29-03-2018 IPR000150 Cof family GO:0016787 AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 PIRSF PIRSF002599 1 70 4.2E-25 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 Gene3D G3DSA:2.40.50.140 1 70 3.0E-28 T 29-03-2018 AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 SUPERFAMILY SSF50249 3 69 6.64E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 7 22 9.0E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 43 61 9.0E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 28 37 9.0E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.9E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site AM460_RS20620 662e2c654a4d1fc5062f4e29d8747029 70 SMART SM00357 6 70 2.4E-30 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS13840 a055e19ef073ae58dca33aba58ca76ef 826 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 289 299 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM460_RS13840 a055e19ef073ae58dca33aba58ca76ef 826 Pfam PF13954 PapC N-terminal domain 26 161 4.3E-33 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS13840 a055e19ef073ae58dca33aba58ca76ef 826 Pfam PF13953 PapC C-terminal domain 753 813 1.7E-9 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS13840 a055e19ef073ae58dca33aba58ca76ef 826 SUPERFAMILY SSF141729 49 153 3.14E-27 T 29-03-2018 AM460_RS13840 a055e19ef073ae58dca33aba58ca76ef 826 Pfam PF00577 Outer membrane usher protein 177 743 3.8E-187 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS23705 4687c28c64c10f8e62974cbd00d50e63 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 133.517 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM460_RS23705 4687c28c64c10f8e62974cbd00d50e63 240 Gene3D G3DSA:3.60.21.10 1 226 5.4E-24 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS23705 4687c28c64c10f8e62974cbd00d50e63 240 SUPERFAMILY SSF56300 4 239 1.52E-31 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS23705 4687c28c64c10f8e62974cbd00d50e63 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 203 1.7E-9 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AM460_RS23705 4687c28c64c10f8e62974cbd00d50e63 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.9E-117 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM460_RS04175 149fb7a87508140bd49dfb75a2489068 398 Pfam PF07219 HemY protein N-terminus 26 132 8.0E-36 T 29-03-2018 IPR010817 HemY, N-terminal AM460_RS04175 149fb7a87508140bd49dfb75a2489068 398 Pfam PF07719 Tetratricopeptide repeat 329 360 1.8E-5 T 29-03-2018 IPR013105 Tetratricopeptide repeat 2 AM460_RS04175 149fb7a87508140bd49dfb75a2489068 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 4.3E-118 T 29-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AM460_RS04175 149fb7a87508140bd49dfb75a2489068 398 SUPERFAMILY SSF48452 269 383 6.26E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS04175 149fb7a87508140bd49dfb75a2489068 398 SUPERFAMILY SSF48452 95 226 6.26E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS04175 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 225 395 1.4E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS04175 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 83 224 1.7E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 225 323 1.46E-23 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04545 Sigma-70, region 4 262 315 2.7E-15 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88946 56 164 2.75E-45 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 2.9E-11 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04539 Sigma-70 region 3 174 248 1.2E-20 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.601.10 2 163 6.4E-59 T 29-03-2018 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 4.4E-145 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 40.0 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 164 214 1.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04542 Sigma-70 region 2 94 163 3.6E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 256 324 4.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS10550 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 5.5E-35 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS18940 ea52a1b4afe3177f23c6cbec9ceccb7d 236 Gene3D G3DSA:1.10.3480.10 4 183 6.9E-32 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS18940 ea52a1b4afe3177f23c6cbec9ceccb7d 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 6.6E-64 T 29-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AM460_RS18940 ea52a1b4afe3177f23c6cbec9ceccb7d 236 Pfam PF02613 Nitrate reductase delta subunit 48 156 1.7E-12 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS18940 ea52a1b4afe3177f23c6cbec9ceccb7d 236 SUPERFAMILY SSF89155 5 163 1.96E-32 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 SMART SM00846 2 150 1.8E-82 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 Gene3D G3DSA:3.30.360.10 160 315 3.1E-60 T 29-03-2018 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 SUPERFAMILY SSF51735 3 166 2.51E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 4.2E-32 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 4.2E-32 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 4.2E-32 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 4.2E-32 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 4.2E-32 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 7.0E-35 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 SUPERFAMILY SSF55347 150 314 3.27E-62 T 29-03-2018 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 PIRSF PIRSF000149 1 333 1.3E-120 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 6.4E-135 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 Gene3D G3DSA:3.40.50.720 1 159 4.9E-71 T 29-03-2018 AM460_RS17790 fa2c05ccc8a86734a4890dacec4e33d9 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 313 7.5E-61 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS26595 c2e2c1cd2e4116b24272f4a05f1a34cb 272 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 52 263 3.4E-73 T 29-03-2018 IPR031618 Putative type IV secretory system protein AM460_RS13520 5d3c8eadea2034d069f468f2626026b5 312 Pfam PF04227 Indigoidine synthase A like protein 16 306 7.2E-132 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AM460_RS13520 5d3c8eadea2034d069f468f2626026b5 312 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 309 44.001 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AM460_RS13520 5d3c8eadea2034d069f468f2626026b5 312 Gene3D G3DSA:3.40.1790.10 6 312 3.3E-139 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AM460_RS13520 5d3c8eadea2034d069f468f2626026b5 312 SUPERFAMILY SSF110581 9 308 6.28E-118 T 29-03-2018 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 3.0E-8 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 3.0E-8 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 3.0E-8 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 3.0E-8 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 SUPERFAMILY SSF54001 2 269 6.48E-88 T 29-03-2018 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 Gene3D G3DSA:3.30.2140.10 2 139 1.7E-39 T 29-03-2018 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 Gene3D G3DSA:3.30.2140.10 141 266 2.1E-16 T 29-03-2018 AM460_RS17570 e959276f9247e568716fdc857fc874a5 281 Pfam PF00797 N-acetyltransferase 22 256 9.5E-86 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM460_RS20855 3f5cd10853e071f0fbf3ee56437c6a03 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 51.171 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM460_RS20855 3f5cd10853e071f0fbf3ee56437c6a03 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 8.2E-187 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM460_RS20855 3f5cd10853e071f0fbf3ee56437c6a03 400 PIRSF PIRSF000484 1 397 3.1E-62 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM460_RS20855 3f5cd10853e071f0fbf3ee56437c6a03 400 SUPERFAMILY SSF54675 2 138 7.06E-44 T 29-03-2018 AM460_RS20855 3f5cd10853e071f0fbf3ee56437c6a03 400 Gene3D G3DSA:3.20.140.10 1 400 4.0E-106 T 29-03-2018 AM460_RS20855 3f5cd10853e071f0fbf3ee56437c6a03 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 9.9E-85 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM460_RS20855 3f5cd10853e071f0fbf3ee56437c6a03 400 SUPERFAMILY SSF51690 120 392 6.28E-87 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM460_RS14260 6fe2b9b5c757a1176d4c43d24b6f01aa 352 Pfam PF04632 Fusaric acid resistance protein family 21 326 2.2E-18 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM460_RS17380 0559b00812f5d004647d5cf74d80bde3 187 Gene3D G3DSA:2.60.40.1090 37 187 1.4E-34 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17380 0559b00812f5d004647d5cf74d80bde3 187 Pfam PF00419 Fimbrial protein 39 186 1.6E-22 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17380 0559b00812f5d004647d5cf74d80bde3 187 SUPERFAMILY SSF49401 39 186 1.79E-36 T 29-03-2018 IPR008966 Adhesion domain AM460_RS17715 b0e55e17c63be92cf77373e9cd1ef18e 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 1.7E-57 T 29-03-2018 IPR021747 Protein of unknown function DUF3313 AM460_RS23750 774165773652537176cc384495a3be4d 349 Pfam PF02615 Malate/L-lactate dehydrogenase 3 331 4.7E-111 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS23750 774165773652537176cc384495a3be4d 349 TIGRFAM TIGR03175 AllD: ureidoglycolate dehydrogenase 1 349 2.5E-198 T 29-03-2018 IPR017590 Ureidoglycolate dehydrogenase KEGG: 00062+1.1.1.35|KEGG: 00071+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00230+1.1.1.350|KEGG: 00280+1.1.1.35|KEGG: 00281+1.1.1.35|KEGG: 00310+1.1.1.35|KEGG: 00362+1.1.1.35|KEGG: 00380+1.1.1.35|KEGG: 00623+1.1.1.35|KEGG: 00650+1.1.1.35|KEGG: 00720+1.1.1.35|KEGG: 00930+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5136|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM460_RS23750 774165773652537176cc384495a3be4d 349 SUPERFAMILY SSF89733 1 334 2.22E-109 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS23750 774165773652537176cc384495a3be4d 349 Gene3D G3DSA:1.10.1530.10 2 79 1.8E-25 T 29-03-2018 AM460_RS23750 774165773652537176cc384495a3be4d 349 Gene3D G3DSA:3.30.1370.60 80 305 4.0E-81 T 29-03-2018 AM460_RS05970 f20867fc14c398889abf543f1b2458d5 502 SUPERFAMILY SSF53067 252 483 1.17E-29 T 29-03-2018 AM460_RS05970 f20867fc14c398889abf543f1b2458d5 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 245 2.5E-45 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS05970 f20867fc14c398889abf543f1b2458d5 502 Gene3D G3DSA:3.30.420.40 1 243 4.4E-51 T 29-03-2018 AM460_RS05970 f20867fc14c398889abf543f1b2458d5 502 Gene3D G3DSA:3.30.420.40 244 491 1.4E-25 T 29-03-2018 AM460_RS05970 f20867fc14c398889abf543f1b2458d5 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 446 1.2E-19 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS05970 f20867fc14c398889abf543f1b2458d5 502 PIRSF PIRSF000538 4 487 1.6E-66 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS05970 f20867fc14c398889abf543f1b2458d5 502 SUPERFAMILY SSF53067 8 247 9.87E-45 T 29-03-2018 AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 555 1.1E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 PIRSF PIRSF003167 288 566 7.6E-104 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 PIRSF PIRSF003167 1 297 4.1E-79 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF07730 Histidine kinase 361 425 8.1E-19 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 4.6E-22 T 29-03-2018 IPR029095 NarX-like, N-terminal AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Gene3D G3DSA:3.30.565.10 424 565 4.0E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SMART SM00387 465 559 8.6E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SMART SM00304 174 227 2.5E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF00672 HAMP domain 175 223 9.8E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SUPERFAMILY SSF55874 424 555 3.41E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS12035 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SUPERFAMILY SSF158472 176 225 3.66E-7 T 29-03-2018 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 SUPERFAMILY SSF48179 170 294 1.25E-37 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 PIRSF PIRSF000103 1 296 4.0E-59 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 Gene3D G3DSA:3.40.50.720 2 169 5.4E-24 T 29-03-2018 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 1.2E-34 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 Gene3D G3DSA:1.10.1040.10 170 296 2.2E-36 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 166 2.2E-35 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM460_RS10585 a6d8f3653e4dfc806d62e1cd9cb46663 302 SUPERFAMILY SSF51735 8 168 4.93E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 Pfam PF00874 PRD domain 73 160 1.6E-23 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 SUPERFAMILY SSF63520 55 164 1.44E-27 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 Pfam PF03123 CAT RNA binding domain 1 55 1.8E-14 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 Gene3D G3DSA:1.10.1790.10 54 162 1.2E-23 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 Gene3D G3DSA:1.10.1790.10 163 269 3.0E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 Gene3D G3DSA:2.30.24.10 1 53 7.3E-14 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 SUPERFAMILY SSF63520 169 267 7.85E-11 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 SMART SM01061 1 58 5.0E-19 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM460_RS10020 ec7a10a7416009f937becb36820ff2fe 274 SUPERFAMILY SSF50151 1 53 1.44E-13 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM460_RS19525 1abf5e2adf8e65279eb663ae88236d58 134 SUPERFAMILY SSF160419 3 127 1.7E-42 T 29-03-2018 IPR009833 Uncharacterised protein DUF1398 AM460_RS19525 1abf5e2adf8e65279eb663ae88236d58 134 Gene3D G3DSA:3.30.1810.10 3 125 2.1E-29 T 29-03-2018 IPR009833 Uncharacterised protein DUF1398 AM460_RS19525 1abf5e2adf8e65279eb663ae88236d58 134 Pfam PF07166 Protein of unknown function (DUF1398) 8 125 1.9E-44 T 29-03-2018 IPR009833 Uncharacterised protein DUF1398 AM460_RS19525 1abf5e2adf8e65279eb663ae88236d58 134 ProDom PD021249 YDFO YCGX ENVELOPE CYTOPLASMIC STY1988 CP-933X ECS1626 YBCV PROPHAGE 1 127 3.0E-71 T 29-03-2018 IPR009833 Uncharacterised protein DUF1398 AM460_RS04960 18fe2359e4d9b63fe46a5f355c76c298 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 282 1.1E-88 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS04960 18fe2359e4d9b63fe46a5f355c76c298 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 9.9E-78 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS04960 18fe2359e4d9b63fe46a5f355c76c298 286 PIRSF PIRSF001359 1 283 2.3E-89 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS04960 18fe2359e4d9b63fe46a5f355c76c298 286 SUPERFAMILY SSF51569 3 283 2.93E-90 T 29-03-2018 AM460_RS04960 18fe2359e4d9b63fe46a5f355c76c298 286 Gene3D G3DSA:3.20.20.70 1 285 1.4E-93 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS12955 e7924ad0bb88c153abf1d13d8f5f2f74 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.8E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12955 e7924ad0bb88c153abf1d13d8f5f2f74 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.8E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12955 e7924ad0bb88c153abf1d13d8f5f2f74 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.8E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12955 e7924ad0bb88c153abf1d13d8f5f2f74 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.8E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12955 e7924ad0bb88c153abf1d13d8f5f2f74 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.8E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12955 e7924ad0bb88c153abf1d13d8f5f2f74 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 4.2E-185 T 29-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12955 e7924ad0bb88c153abf1d13d8f5f2f74 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 5.6E-70 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 SUPERFAMILY SSF52922 702 885 1.12E-64 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 296 1.2E-9 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 Gene3D G3DSA:3.40.50.970 472 706 4.3E-67 T 29-03-2018 AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 SUPERFAMILY SSF52518 474 701 7.53E-99 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 Gene3D G3DSA:3.40.50.920 707 887 2.3E-43 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 PIRSF PIRSF000156 1 887 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 SUPERFAMILY SSF52518 58 469 4.42E-145 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS25770 6661e42b76599483a127a1fe3c7d0752 887 Gene3D G3DSA:3.40.50.970 57 471 2.9E-85 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF56014 633 808 1.57E-46 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.8E-11 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.8E-11 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.8E-11 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.8E-11 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF51905 2 189 3.14E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 29-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Gene3D G3DSA:3.40.50.720 128 310 8.0E-34 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Gene3D G3DSA:3.50.50.60 1 127 1.2E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Gene3D G3DSA:3.90.480.10 428 628 4.8E-18 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 8.4E-15 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.1E-14 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.1E-14 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.1E-14 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.1E-14 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.1E-11 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Gene3D G3DSA:3.30.413.10 631 816 1.2E-36 T 29-03-2018 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 3.5E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PIRSF PIRSF037149 1 835 0.0 T 29-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF55124 502 627 5.72E-31 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF51905 144 310 5.7E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 1.3E-5 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 1.3E-5 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS06575 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 7.3E-15 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS22320 5766ac9f1e39226e7ae1f9b4f75ed334 320 Gene3D G3DSA:3.40.1030.10 80 320 4.0E-40 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS22320 5766ac9f1e39226e7ae1f9b4f75ed334 320 SUPERFAMILY SSF47648 7 72 1.7E-14 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS22320 5766ac9f1e39226e7ae1f9b4f75ed334 320 Gene3D G3DSA:1.20.970.10 1 71 6.6E-16 T 29-03-2018 AM460_RS22320 5766ac9f1e39226e7ae1f9b4f75ed334 320 SUPERFAMILY SSF52418 75 319 8.79E-49 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS22320 5766ac9f1e39226e7ae1f9b4f75ed334 320 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 2.0E-10 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:2.40.50.40 135 201 2.2E-7 T 29-03-2018 AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 SMART SM00850 143 238 4.5E-27 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 SUPERFAMILY SSF52172 1 123 8.97E-32 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:3.40.50.2300 1 134 6.2E-30 T 29-03-2018 AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 SMART SM00448 2 112 1.4E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:2.20.25.10 203 238 7.1E-10 T 29-03-2018 AM460_RS13755 19ff1b5d6bf0dc49e6340de80d654268 239 Pfam PF04397 LytTr DNA-binding domain 144 237 1.3E-24 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM460_RS01860 bf9857962d63f9a9d1c63b682285a5b6 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM460_RS01860 bf9857962d63f9a9d1c63b682285a5b6 141 Pfam PF02082 Transcriptional regulator 2 82 5.2E-24 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM460_RS01860 bf9857962d63f9a9d1c63b682285a5b6 141 Gene3D G3DSA:1.10.10.10 1 136 1.5E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01860 bf9857962d63f9a9d1c63b682285a5b6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.136 T 29-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 AM460_RS01860 bf9857962d63f9a9d1c63b682285a5b6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.8E-36 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM460_RS01860 bf9857962d63f9a9d1c63b682285a5b6 141 SUPERFAMILY SSF46785 2 131 6.37E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25230 e0fac274534a7e9caf10ee9a64977348 155 SUPERFAMILY SSF53098 4 147 4.17E-59 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS25230 e0fac274534a7e9caf10ee9a64977348 155 Pfam PF00075 RNase H 3 141 3.0E-55 T 29-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AM460_RS25230 e0fac274534a7e9caf10ee9a64977348 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 40.217 T 29-03-2018 IPR022892 Ribonuclease HI GO:0004523 AM460_RS25230 e0fac274534a7e9caf10ee9a64977348 155 Gene3D G3DSA:3.30.420.10 1 155 1.7E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS20450 e9ef2691b0b66eb4d52a3ada8f11710a 354 Gene3D G3DSA:3.40.50.300 146 351 7.4E-21 T 29-03-2018 AM460_RS20450 e9ef2691b0b66eb4d52a3ada8f11710a 354 SUPERFAMILY SSF52540 148 331 2.87E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20450 e9ef2691b0b66eb4d52a3ada8f11710a 354 Pfam PF02562 PhoH-like protein 149 353 1.7E-76 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 Pfam PF00155 Aminotransferase class I and II 28 392 4.7E-96 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 SUPERFAMILY SSF53383 1 396 9.67E-118 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 Gene3D G3DSA:3.90.1150.10 300 396 1.7E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 Gene3D G3DSA:3.90.1150.10 1 76 7.2E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM460_RS20875 6a9e314e3fff4ffd1d6dbd79caf6e201 396 Gene3D G3DSA:3.40.640.10 77 299 4.0E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 3.9E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.9E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.9E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 3.9E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.7E-29 T 29-03-2018 IPR023214 HAD-like domain AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 SUPERFAMILY SSF56784 5 185 2.67E-46 T 29-03-2018 IPR023214 HAD-like domain AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:1.10.150.240 18 75 9.3E-14 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:3.40.50.1000 76 186 1.1E-23 T 29-03-2018 IPR023214 HAD-like domain AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.4E-66 T 29-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase AM460_RS10825 c17a6b2b10d2fa8dfc47691a19199fb9 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 4.2E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 Pfam PF01555 DNA methylase 21 200 5.5E-32 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 2.5E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 2.5E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 2.5E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 2.5E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 2.5E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 Gene3D G3DSA:3.40.50.150 2 220 4.0E-42 T 29-03-2018 AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 SUPERFAMILY SSF53335 3 209 2.06E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS26875 7b4e2893651849c3d0fd1b40ae3bccb5 227 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS25255 a883a058ed9160569ff9f9f431d5a057 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 6.1E-9 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS25255 a883a058ed9160569ff9f9f431d5a057 266 Gene3D G3DSA:3.60.10.10 35 260 5.5E-17 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS25255 a883a058ed9160569ff9f9f431d5a057 266 SUPERFAMILY SSF56219 44 260 1.96E-26 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS25255 a883a058ed9160569ff9f9f431d5a057 266 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 54.24 T 29-03-2018 IPR022958 Uncharacterised protein family UPF0294 AM460_RS14515 642a55096370fa1444212eaeb2240866 344 Pfam PF02126 Phosphotriesterase family 14 343 1.6E-46 T 29-03-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 AM460_RS14515 642a55096370fa1444212eaeb2240866 344 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 18 26 - T 29-03-2018 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 AM460_RS14515 642a55096370fa1444212eaeb2240866 344 SUPERFAMILY SSF51556 72 343 6.35E-73 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS14515 642a55096370fa1444212eaeb2240866 344 SUPERFAMILY SSF51556 3 45 6.35E-73 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS14515 642a55096370fa1444212eaeb2240866 344 Gene3D G3DSA:3.20.20.140 1 344 2.0E-55 T 29-03-2018 AM460_RS13870 07e248adb42869475236bb8a1b6e2ab1 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 5.3E-95 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM460_RS13870 07e248adb42869475236bb8a1b6e2ab1 266 Gene3D G3DSA:3.40.1190.20 1 266 3.1E-63 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13870 07e248adb42869475236bb8a1b6e2ab1 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 3.0E-109 T 29-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM460_RS13870 07e248adb42869475236bb8a1b6e2ab1 266 SUPERFAMILY SSF53613 5 265 2.96E-80 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS03940 482427110e587942605f684e93228960 324 PIRSF PIRSF017082 1 324 5.3E-106 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM460_RS03940 482427110e587942605f684e93228960 324 SUPERFAMILY SSF53850 120 289 4.42E-10 T 29-03-2018 AM460_RS03940 482427110e587942605f684e93228960 324 Gene3D G3DSA:3.40.190.10 155 297 3.2E-15 T 29-03-2018 AM460_RS03940 482427110e587942605f684e93228960 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 321 5.0E-59 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM460_RS11110 a97a856d875b2d5c186ca7c3682f332f 329 Gene3D G3DSA:3.30.50.20 256 326 9.2E-17 T 29-03-2018 AM460_RS11110 a97a856d875b2d5c186ca7c3682f332f 329 SMART SM00507 246 295 1.9E-5 T 29-03-2018 IPR003615 HNH nuclease AM460_RS11110 a97a856d875b2d5c186ca7c3682f332f 329 Pfam PF06147 Protein of unknown function (DUF968) 129 326 8.0E-89 T 29-03-2018 IPR010373 Protein of unknown function DUF968 AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 Gene3D G3DSA:3.30.70.20 63 386 2.4E-4 T 29-03-2018 AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 Gene3D G3DSA:3.30.70.20 4 62 5.0E-9 T 29-03-2018 AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 395 9.0E-232 T 29-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 SUPERFAMILY SSF46548 6 82 6.45E-17 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 Pfam PF13183 4Fe-4S dicluster domain 6 70 2.9E-10 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 Pfam PF02754 Cysteine-rich domain 163 249 7.8E-15 T 29-03-2018 IPR004017 Cysteine-rich domain AM460_RS13115 1c5370fa0ecea0b180056df14d5dd144 396 Pfam PF02754 Cysteine-rich domain 293 376 9.9E-15 T 29-03-2018 IPR004017 Cysteine-rich domain AM460_RS06280 af73e31053e1f17f0a9758c2a3e592be 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.049 T 29-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM460_RS06280 af73e31053e1f17f0a9758c2a3e592be 108 SUPERFAMILY SSF52821 1 100 5.63E-27 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS06280 af73e31053e1f17f0a9758c2a3e592be 108 SMART SM00450 7 102 1.0E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS06280 af73e31053e1f17f0a9758c2a3e592be 108 Pfam PF00581 Rhodanese-like domain 11 98 1.3E-13 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS06280 af73e31053e1f17f0a9758c2a3e592be 108 Gene3D G3DSA:3.40.250.10 1 108 3.3E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS04955 b8af2a66ee3df4678c76504b1fa31b37 283 Gene3D G3DSA:3.20.20.70 1 283 1.0E-72 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS04955 b8af2a66ee3df4678c76504b1fa31b37 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 276 2.8E-74 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS04955 b8af2a66ee3df4678c76504b1fa31b37 283 PIRSF PIRSF001359 1 283 4.4E-64 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS04955 b8af2a66ee3df4678c76504b1fa31b37 283 SUPERFAMILY SSF51569 4 283 2.01E-74 T 29-03-2018 AM460_RS16865 c09fb6d75ae6e76809eaae0a26d24d2c 369 Gene3D G3DSA:3.30.420.40 3 180 1.5E-55 T 29-03-2018 AM460_RS16865 c09fb6d75ae6e76809eaae0a26d24d2c 369 Gene3D G3DSA:3.30.420.40 221 369 8.9E-28 T 29-03-2018 AM460_RS16865 c09fb6d75ae6e76809eaae0a26d24d2c 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.32 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM460_RS16865 c09fb6d75ae6e76809eaae0a26d24d2c 369 SUPERFAMILY SSF53067 66 111 5.61E-28 T 29-03-2018 AM460_RS16865 c09fb6d75ae6e76809eaae0a26d24d2c 369 SUPERFAMILY SSF53067 143 341 5.61E-28 T 29-03-2018 AM460_RS16865 c09fb6d75ae6e76809eaae0a26d24d2c 369 SUPERFAMILY SSF53067 5 37 5.61E-28 T 29-03-2018 AM460_RS16865 c09fb6d75ae6e76809eaae0a26d24d2c 369 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 1.0E-177 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM460_RS23305 2bf4dbadb6f030f580754e5d6a4776b1 302 Gene3D G3DSA:3.20.20.360 2 273 2.0E-53 T 29-03-2018 AM460_RS23305 2bf4dbadb6f030f580754e5d6a4776b1 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 234 1.9E-83 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM460_RS23305 2bf4dbadb6f030f580754e5d6a4776b1 302 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 12 299 1.7E-136 T 29-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 AM460_RS23305 2bf4dbadb6f030f580754e5d6a4776b1 302 PIRSF PIRSF015582 1 302 1.3E-75 T 29-03-2018 IPR011206 Citrate lyase beta subunit-like AM460_RS23305 2bf4dbadb6f030f580754e5d6a4776b1 302 SUPERFAMILY SSF51621 11 244 6.28E-62 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS22430 6b386b2357dc0ef636633d38e67e89ac 225 PIRSF PIRSF006755 1 225 1.6E-88 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM460_RS22430 6b386b2357dc0ef636633d38e67e89ac 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.3E-67 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM460_RS22430 6b386b2357dc0ef636633d38e67e89ac 225 Gene3D G3DSA:3.40.50.300 1 218 1.3E-58 T 29-03-2018 AM460_RS22430 6b386b2357dc0ef636633d38e67e89ac 225 SUPERFAMILY SSF52540 4 211 6.76E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22430 6b386b2357dc0ef636633d38e67e89ac 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 216 30.284 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM460_RS22430 6b386b2357dc0ef636633d38e67e89ac 225 Pfam PF13500 AAA domain 4 208 1.6E-39 T 29-03-2018 AM460_RS14970 0da58dc137edd4e1935cd596c73e4d5e 183 Gene3D G3DSA:3.90.280.10 8 183 1.3E-52 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM460_RS14970 0da58dc137edd4e1935cd596c73e4d5e 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 44 180 1.3E-36 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM460_RS14970 0da58dc137edd4e1935cd596c73e4d5e 183 SUPERFAMILY SSF49777 22 181 3.92E-54 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM460_RS14970 0da58dc137edd4e1935cd596c73e4d5e 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 39 180 4.4E-55 T 29-03-2018 IPR005247 YbhB/YbcL AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 Pfam PF07238 PilZ domain 694 790 8.9E-13 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 SUPERFAMILY SSF141371 695 779 2.16E-8 T 29-03-2018 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 Pfam PF00535 Glycosyl transferase family 2 276 446 1.1E-34 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 Gene3D G3DSA:2.40.10.220 690 798 9.6E-16 T 29-03-2018 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 147 830 0.0 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 SUPERFAMILY SSF53448 275 553 1.91E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 Gene3D G3DSA:3.90.550.10 273 512 2.3E-47 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 7.7E-56 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM460_RS05640 8c8ea93be9a2fba8d6b09b3235415860 872 Pfam PF03552 Cellulose synthase 451 674 3.5E-13 T 29-03-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AM460_RS20285 1488b60df2c4db0e80ef8dd93b9ffb31 191 SMART SM00867 24 188 9.3E-75 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM460_RS20285 1488b60df2c4db0e80ef8dd93b9ffb31 191 SUPERFAMILY SSF101874 22 190 6.54E-58 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM460_RS20285 1488b60df2c4db0e80ef8dd93b9ffb31 191 Pfam PF04264 YceI-like domain 25 186 1.3E-43 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM460_RS20285 1488b60df2c4db0e80ef8dd93b9ffb31 191 Gene3D G3DSA:2.40.128.110 23 191 2.4E-52 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM460_RS20285 1488b60df2c4db0e80ef8dd93b9ffb31 191 Hamap MF_00780 Protein YceI [yceI]. 1 191 49.033 T 29-03-2018 IPR023480 Uncharacterised protein family UPF0312/YceI AM460_RS03415 ca63a4328404c8e6cbec8523b84f1d95 176 PIRSF PIRSF039093 1 175 1.1E-88 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM460_RS03415 ca63a4328404c8e6cbec8523b84f1d95 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.149 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM460_RS03415 ca63a4328404c8e6cbec8523b84f1d95 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.5E-87 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM460_RS03415 ca63a4328404c8e6cbec8523b84f1d95 176 Gene3D G3DSA:3.60.20.10 2 173 1.8E-32 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS03415 ca63a4328404c8e6cbec8523b84f1d95 176 SUPERFAMILY SSF56235 2 172 1.08E-58 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS03415 ca63a4328404c8e6cbec8523b84f1d95 176 Pfam PF00227 Proteasome subunit 2 167 1.3E-23 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM460_RS00460 1d4fc55e7c6e278142c93508e5b511d5 98 Gene3D G3DSA:1.10.287.1080 14 92 3.7E-4 T 29-03-2018 AM460_RS00460 1d4fc55e7c6e278142c93508e5b511d5 98 SUPERFAMILY SSF101386 18 64 3.18E-5 T 29-03-2018 AM460_RS10765 a35231ffb460249ed307b5b4719eec2d 361 Gene3D G3DSA:1.10.530.10 241 361 7.7E-33 T 29-03-2018 AM460_RS10765 a35231ffb460249ed307b5b4719eec2d 361 SUPERFAMILY SSF53955 46 356 5.77E-103 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS10765 a35231ffb460249ed307b5b4719eec2d 361 Gene3D G3DSA:1.10.8.350 131 235 4.3E-36 T 29-03-2018 AM460_RS10765 a35231ffb460249ed307b5b4719eec2d 361 Gene3D G3DSA:1.10.8.350 52 130 4.4E-10 T 29-03-2018 AM460_RS10765 a35231ffb460249ed307b5b4719eec2d 361 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 355 1.8E-130 T 29-03-2018 IPR011757 Lytic transglycosylase MltB AM460_RS10765 a35231ffb460249ed307b5b4719eec2d 361 Pfam PF13406 Transglycosylase SLT domain 57 353 3.2E-92 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 AM460_RS02970 4a94bd65db6f2865f3534956fb784f2b 309 SUPERFAMILY SSF52317 17 297 1.3E-100 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS02970 4a94bd65db6f2865f3534956fb784f2b 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 8.4E-133 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM460_RS02970 4a94bd65db6f2865f3534956fb784f2b 309 PIRSF PIRSF000450 1 308 1.7E-149 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM460_RS02970 4a94bd65db6f2865f3534956fb784f2b 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.752 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM460_RS02970 4a94bd65db6f2865f3534956fb784f2b 309 Gene3D G3DSA:3.40.50.880 34 301 2.9E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS02970 4a94bd65db6f2865f3534956fb784f2b 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 4.8E-169 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM460_RS02970 4a94bd65db6f2865f3534956fb784f2b 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 7.0E-150 T 29-03-2018 AM460_RS10265 e6fb98e67aac1ccf95cfe75f030df675 438 Pfam PF07690 Major Facilitator Superfamily 33 387 1.1E-19 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS10265 e6fb98e67aac1ccf95cfe75f030df675 438 Gene3D G3DSA:1.20.1250.20 245 438 4.0E-21 T 29-03-2018 AM460_RS10265 e6fb98e67aac1ccf95cfe75f030df675 438 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 24 432 1.3E-204 T 29-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AM460_RS10265 e6fb98e67aac1ccf95cfe75f030df675 438 Gene3D G3DSA:1.20.1250.20 20 244 7.2E-24 T 29-03-2018 AM460_RS10265 e6fb98e67aac1ccf95cfe75f030df675 438 SUPERFAMILY SSF103473 20 431 1.83E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10130 2b19b23c337a11dfe65f306b428b4138 622 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 241 376 8.3E-11 T 29-03-2018 IPR018712 Domain of unknown function DUF2235 AM460_RS15480 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 PIRSF PIRSF002816 1 326 1.0E-150 T 29-03-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 AM460_RS15480 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 Gene3D G3DSA:3.40.50.2300 21 146 2.0E-11 T 29-03-2018 AM460_RS15480 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 SUPERFAMILY SSF53822 26 325 1.26E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS15480 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 2.2E-96 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM460_RS15480 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 Gene3D G3DSA:3.40.50.2300 147 293 2.6E-17 T 29-03-2018 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF03477 ATP cone domain 6 92 2.9E-15 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.5E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.5E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.5E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.5E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.5E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.5E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.3E-120 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 3.0E-12 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 Gene3D G3DSA:3.20.70.20 122 739 9.7E-149 T 29-03-2018 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 SUPERFAMILY SSF51998 222 740 1.5E-170 T 29-03-2018 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 SUPERFAMILY SSF48168 10 221 4.71E-74 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13155 3e535e98acb0b385faad5ed3c59eda59 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 7.2E-181 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 417 498 1.5E-20 T 29-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.9E-42 T 29-03-2018 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 Gene3D G3DSA:3.40.50.300 1 166 9.4E-40 T 29-03-2018 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 Gene3D G3DSA:1.10.8.60 167 242 7.4E-20 T 29-03-2018 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 Gene3D G3DSA:1.20.272.10 243 363 5.2E-14 T 29-03-2018 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 1.8E-133 T 29-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 SUPERFAMILY SSF48019 243 365 2.98E-36 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 SMART SM00382 37 178 1.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 SUPERFAMILY SSF52540 35 221 2.31E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 3.4E-32 T 29-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AM460_RS24005 a2b5fc237e1ed5f8b0af88e7fb505c05 643 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 500 640 2.5E-59 T 29-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS12810 b843c1d4a9140c7cecc9cdb02ccad193 257 Gene3D G3DSA:3.40.50.300 1 256 4.4E-73 T 29-03-2018 AM460_RS12810 b843c1d4a9140c7cecc9cdb02ccad193 257 PIRSF PIRSF039085 2 257 9.4E-123 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM460_RS12810 b843c1d4a9140c7cecc9cdb02ccad193 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS12810 b843c1d4a9140c7cecc9cdb02ccad193 257 SUPERFAMILY SSF52540 6 251 3.15E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS12810 b843c1d4a9140c7cecc9cdb02ccad193 257 Pfam PF00005 ABC transporter 21 181 4.7E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS12810 b843c1d4a9140c7cecc9cdb02ccad193 257 SMART SM00382 30 229 6.9E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22535 b0c566c23891764c798600bae19bd8d5 338 SUPERFAMILY SSF51735 1 336 5.63E-102 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS22535 b0c566c23891764c798600bae19bd8d5 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 4.0E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS22535 b0c566c23891764c798600bae19bd8d5 338 Gene3D G3DSA:3.40.50.720 1 207 7.3E-45 T 29-03-2018 AM460_RS22535 b0c566c23891764c798600bae19bd8d5 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 9.8E-151 T 29-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 AM460_RS22535 b0c566c23891764c798600bae19bd8d5 338 Gene3D G3DSA:3.90.25.10 208 252 4.6E-13 T 29-03-2018 AM460_RS22535 b0c566c23891764c798600bae19bd8d5 338 Gene3D G3DSA:3.90.25.10 253 337 1.6E-20 T 29-03-2018 AM460_RS27715 baf05ff616b02ff720069d3f61039f9c 101 SUPERFAMILY SSF50118 1 101 1.18E-33 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS27715 baf05ff616b02ff720069d3f61039f9c 101 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 9 100 2.0E-48 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM460_RS27715 baf05ff616b02ff720069d3f61039f9c 101 Pfam PF01845 CcdB protein 2 100 5.0E-29 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM460_RS27715 baf05ff616b02ff720069d3f61039f9c 101 Gene3D G3DSA:2.30.30.110 2 100 9.3E-21 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 323 1.8E-162 T 29-03-2018 IPR014317 Transcription activator PspF AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 SUPERFAMILY SSF52540 9 250 6.3E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 Pfam PF00158 Sigma-54 interaction domain 9 170 2.2E-62 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 Gene3D G3DSA:1.10.8.60 180 280 1.3E-21 T 29-03-2018 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 306 325 2.7E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 289 306 2.7E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 Gene3D G3DSA:3.40.50.300 1 179 4.5E-28 T 29-03-2018 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 SUPERFAMILY SSF46689 222 325 1.93E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 Pfam PF02954 Bacterial regulatory protein, Fis family 286 322 1.1E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 SMART SM00382 28 180 2.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 Gene3D G3DSA:1.10.10.60 281 325 9.4E-9 T 29-03-2018 AM460_RS18120 df6b7539377d45f97c0b79b85ebf2640 325 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 258 1.4E-68 T 29-03-2018 AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 SUPERFAMILY SSF51735 15 259 7.37E-80 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 3.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 3.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 3.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS23540 0ef20122a56890afd380fea3645ddad5 261 Gene3D G3DSA:3.40.50.720 5 261 3.2E-72 T 29-03-2018 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 191 199 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 50 58 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 1.2E-28 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 187 198 1.2E-28 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 181 1.2E-28 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 1.2E-28 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 Gene3D G3DSA:2.40.160.20 25 199 1.4E-23 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 SUPERFAMILY SSF56925 31 199 2.88E-28 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS11245 48e091cf6c7ef5f24f4534293615baa4 199 Pfam PF06316 Enterobacterial Ail/Lom protein 1 199 1.5E-123 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS13535 d7fc427ab1dd6e04138d742f57e1de16 313 SUPERFAMILY SSF53590 3 307 1.28E-101 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS13535 d7fc427ab1dd6e04138d742f57e1de16 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 299 4.5E-85 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS13535 d7fc427ab1dd6e04138d742f57e1de16 313 Hamap MF_01433 Pyrimidine-specific ribonucleoside hydrolase RihB [rihB]. 1 313 86.298 T 29-03-2018 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB GO:0046133|GO:0050263 KEGG: 00230+3.2.2.8|KEGG: 00240+3.2.2.8 AM460_RS13535 d7fc427ab1dd6e04138d742f57e1de16 313 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AM460_RS13535 d7fc427ab1dd6e04138d742f57e1de16 313 Gene3D G3DSA:3.90.245.10 1 313 1.9E-106 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS19345 ae5b826c1faba4566de05bf2241c2304 510 Pfam PF04293 SpoVR like protein 19 450 3.3E-176 T 29-03-2018 IPR007390 Sporulation stage V, protein R AM460_RS24675 6cf10c690e9b383dc68d9a043a2ea1d5 223 PIRSF PIRSF006324 14 220 1.6E-54 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS24675 6cf10c690e9b383dc68d9a043a2ea1d5 223 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 33 215 8.5E-71 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AM460_RS24675 6cf10c690e9b383dc68d9a043a2ea1d5 223 Pfam PF01810 LysE type translocator 29 219 5.4E-56 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS16870 d83bb6a4139c84580616534509ee4a1e 109 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 35 97 9.2E-17 T 29-03-2018 IPR018660 C-type lysozyme inhibitor AM460_RS16870 d83bb6a4139c84580616534509ee4a1e 109 SUPERFAMILY SSF141488 28 107 9.55E-24 T 29-03-2018 IPR018660 C-type lysozyme inhibitor AM460_RS00910 8259a55dbf87ccc1294b157a0e5f075c 368 SUPERFAMILY SSF117281 191 356 3.27E-38 T 29-03-2018 AM460_RS00910 8259a55dbf87ccc1294b157a0e5f075c 368 SUPERFAMILY SSF117281 40 156 3.27E-38 T 29-03-2018 AM460_RS00910 8259a55dbf87ccc1294b157a0e5f075c 368 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 1 368 45.453 T 29-03-2018 IPR019936 Mutatrotase, YjhT-like AM460_RS00910 8259a55dbf87ccc1294b157a0e5f075c 368 Gene3D G3DSA:2.120.10.80 9 289 4.9E-35 T 29-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AM460_RS00910 8259a55dbf87ccc1294b157a0e5f075c 368 Gene3D G3DSA:2.120.10.80 290 368 8.6E-4 T 29-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AM460_RS00910 8259a55dbf87ccc1294b157a0e5f075c 368 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 22 359 2.6E-144 T 29-03-2018 IPR019936 Mutatrotase, YjhT-like AM460_RS00910 8259a55dbf87ccc1294b157a0e5f075c 368 Pfam PF01344 Kelch motif 75 122 3.5E-9 T 29-03-2018 IPR006652 Kelch repeat type 1 GO:0005515 AM460_RS08585 d90a1ebb127f654db3d4a7c56ce5df07 567 SUPERFAMILY SSF56762 1 552 2.75E-169 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS08585 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AM460_RS08585 d90a1ebb127f654db3d4a7c56ce5df07 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 2.6E-209 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AM460_RS08585 d90a1ebb127f654db3d4a7c56ce5df07 567 Gene3D G3DSA:1.10.645.10 1 552 1.1E-182 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS08585 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AM460_RS09330 3dcb56a3ba72355f20ddb0aa0d6d5989 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 1.3E-42 T 29-03-2018 IPR007416 Protein of unknown function DUF469 AM460_RS12845 9ccfa44c646477a44dd3b707d777f3b2 506 Pfam PF03606 C4-dicarboxylate anaerobic carrier 15 501 5.2E-164 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM460_RS10275 0befd06da2efe6f93b7119a68d6850ce 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 2.8E-200 T 29-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 AM460_RS10275 0befd06da2efe6f93b7119a68d6850ce 382 SUPERFAMILY SSF56796 7 382 6.02E-125 T 29-03-2018 AM460_RS10275 0befd06da2efe6f93b7119a68d6850ce 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS10275 0befd06da2efe6f93b7119a68d6850ce 382 Gene3D G3DSA:3.40.50.1970 9 184 6.3E-43 T 29-03-2018 AM460_RS10275 0befd06da2efe6f93b7119a68d6850ce 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 1.3E-118 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS10275 0befd06da2efe6f93b7119a68d6850ce 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS10275 0befd06da2efe6f93b7119a68d6850ce 382 Gene3D G3DSA:1.20.1090.10 186 382 4.5E-64 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 TIGRFAM TIGR00746 arcC: carbamate kinase 7 317 3.2E-110 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 160 179 5.8E-55 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 183 201 5.8E-55 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 5.8E-55 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 76 94 5.8E-55 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 213 228 5.8E-55 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 268 283 5.8E-55 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 5.8E-55 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 SUPERFAMILY SSF53633 6 316 2.88E-74 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 Gene3D G3DSA:3.40.1160.10 2 318 1.2E-49 T 29-03-2018 AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 Pfam PF00696 Amino acid kinase family 5 287 5.7E-27 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS03985 4e838ccd073dcd26a42637b230dbda46 318 PIRSF PIRSF000723 2 318 1.7E-132 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM460_RS13920 cec9b26651f00c09e5c64e91df98286c 150 Gene3D G3DSA:3.40.930.10 3 144 5.8E-21 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS13920 cec9b26651f00c09e5c64e91df98286c 150 SUPERFAMILY SSF55804 9 140 6.02E-27 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS13920 cec9b26651f00c09e5c64e91df98286c 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 11 131 1.1E-21 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS07150 fc2a3e9ea2a7ee652a69d54c9e545eba 311 SUPERFAMILY SSF53613 2 308 2.03E-66 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS07150 fc2a3e9ea2a7ee652a69d54c9e545eba 311 Pfam PF00294 pfkB family carbohydrate kinase 28 297 5.5E-45 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS07150 fc2a3e9ea2a7ee652a69d54c9e545eba 311 Gene3D G3DSA:3.40.1190.20 1 311 7.7E-54 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS08700 72ae53d84e9b4f49955d922a658cd9fa 350 SUPERFAMILY SSF56176 12 174 1.21E-30 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS08700 72ae53d84e9b4f49955d922a658cd9fa 350 Gene3D G3DSA:3.30.465.10 52 173 1.4E-27 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS08700 72ae53d84e9b4f49955d922a658cd9fa 350 Pfam PF01565 FAD binding domain 13 136 8.0E-18 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM460_RS08700 72ae53d84e9b4f49955d922a658cd9fa 350 SUPERFAMILY SSF55103 134 346 1.57E-14 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM460_RS08700 72ae53d84e9b4f49955d922a658cd9fa 350 Gene3D G3DSA:1.10.45.10 319 348 2.0E-4 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM460_RS14980 71b15a81e45652c0ea0251d67c107f76 174 SUPERFAMILY SSF143422 6 119 6.15E-37 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS14980 71b15a81e45652c0ea0251d67c107f76 174 Gene3D G3DSA:3.30.70.1290 5 130 2.8E-19 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS14980 71b15a81e45652c0ea0251d67c107f76 174 SMART SM01321 14 124 3.1E-26 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS14980 71b15a81e45652c0ea0251d67c107f76 174 Pfam PF01797 Transposase IS200 like 17 119 7.8E-33 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS10970 07a06880b5f9a810373415f2b2df8d26 466 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 8.0E-258 T 29-03-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 AM460_RS10970 07a06880b5f9a810373415f2b2df8d26 466 Pfam PF00324 Amino acid permease 18 453 1.6E-125 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS10970 07a06880b5f9a810373415f2b2df8d26 466 PIRSF PIRSF006060 1 463 2.7E-74 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS10970 07a06880b5f9a810373415f2b2df8d26 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS02195 62bbf7dad703c9502be42d1679853d2e 239 Gene3D G3DSA:1.10.10.10 145 235 8.4E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02195 62bbf7dad703c9502be42d1679853d2e 239 Gene3D G3DSA:3.40.50.2300 1 144 7.9E-26 T 29-03-2018 AM460_RS02195 62bbf7dad703c9502be42d1679853d2e 239 PIRSF PIRSF006171 1 230 2.3E-83 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AM460_RS02195 62bbf7dad703c9502be42d1679853d2e 239 SMART SM00448 2 117 5.5E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS02195 62bbf7dad703c9502be42d1679853d2e 239 Pfam PF00072 Response regulator receiver domain 4 117 4.6E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS02195 62bbf7dad703c9502be42d1679853d2e 239 SUPERFAMILY SSF52172 1 136 1.34E-28 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS19425 48e12cecac761e9a37f181be663a4bfe 88 SUPERFAMILY SSF55229 32 85 1.22E-18 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM460_RS19425 48e12cecac761e9a37f181be663a4bfe 88 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 3.9E-25 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM460_RS19425 48e12cecac761e9a37f181be663a4bfe 88 Gene3D G3DSA:3.30.1070.10 1 83 1.7E-29 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM460_RS19425 48e12cecac761e9a37f181be663a4bfe 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.958 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM460_RS19425 48e12cecac761e9a37f181be663a4bfe 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.4E-37 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM460_RS05025 e49900bf4f81a44994e8d3283fa4021d 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 3.2E-34 T 29-03-2018 IPR013551 Domain of unknown function DUF1732 AM460_RS05025 e49900bf4f81a44994e8d3283fa4021d 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.4E-43 T 29-03-2018 IPR013527 YicC-like, N-terminal AM460_RS05025 e49900bf4f81a44994e8d3283fa4021d 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.5E-138 T 29-03-2018 IPR005229 Conserved hypothetical protein CHP00255 AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 Gene3D G3DSA:1.20.1250.20 12 230 8.7E-25 T 29-03-2018 AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 417 8.4E-145 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 Pfam PF12832 MFS_1 like family 261 419 2.2E-6 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 Gene3D G3DSA:1.20.1250.20 231 429 2.3E-18 T 29-03-2018 AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 Pfam PF00083 Sugar (and other) transporter 24 221 6.0E-26 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS11450 4ceb73d2fb503c37f1b85e2b36e7be23 432 SUPERFAMILY SSF103473 18 430 1.83E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS14105 b47732d19f69e5dbff5acc7350abc52c 382 Gene3D G3DSA:3.40.50.2000 189 361 1.3E-27 T 29-03-2018 AM460_RS14105 b47732d19f69e5dbff5acc7350abc52c 382 Pfam PF00534 Glycosyl transferases group 1 192 353 1.3E-23 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM460_RS14105 b47732d19f69e5dbff5acc7350abc52c 382 SUPERFAMILY SSF53756 2 373 1.4E-43 T 29-03-2018 AM460_RS21275 e0e915dc33c06ac05497747341a215e7 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.1E-80 T 29-03-2018 IPR003776 YcaO-like domain AM460_RS21275 e0e915dc33c06ac05497747341a215e7 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 5.8E-172 T 29-03-2018 IPR003776 YcaO-like domain AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 3.8E-170 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 Pfam PF01938 TRAM domain 11 67 4.6E-13 T 29-03-2018 IPR002792 TRAM domain AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 SUPERFAMILY SSF50249 2 67 1.48E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 SUPERFAMILY SSF53335 76 431 2.57E-93 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 254 431 4.7E-27 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 Gene3D G3DSA:3.40.50.150 88 431 1.1E-55 T 29-03-2018 AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 66.996 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM460_RS10345 0955e60d251bdbbe2fc4433f4a23da27 433 Gene3D G3DSA:2.40.50.140 1 87 6.8E-29 T 29-03-2018 AM460_RS20120 211eeaac246f953b67ca2ccd0477fe3b 57 Pfam PF01783 Ribosomal L32p protein family 2 57 1.9E-19 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS20120 211eeaac246f953b67ca2ccd0477fe3b 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.2E-18 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS20120 211eeaac246f953b67ca2ccd0477fe3b 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.352 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS20120 211eeaac246f953b67ca2ccd0477fe3b 57 SUPERFAMILY SSF57829 2 55 1.53E-18 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM460_RS03450 94a3eaf73454c249034860575bc1b891 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 335 5.4E-189 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM460_RS03450 94a3eaf73454c249034860575bc1b891 336 PIRSF PIRSF004532 1 333 5.3E-143 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM460_RS03450 94a3eaf73454c249034860575bc1b891 336 Gene3D G3DSA:3.30.540.10 1 148 5.0E-59 T 29-03-2018 AM460_RS03450 94a3eaf73454c249034860575bc1b891 336 Gene3D G3DSA:3.30.540.10 152 336 1.4E-55 T 29-03-2018 AM460_RS03450 94a3eaf73454c249034860575bc1b891 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 5.0E-133 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM460_RS03450 94a3eaf73454c249034860575bc1b891 336 SUPERFAMILY SSF56655 2 325 3.48E-112 T 29-03-2018 AM460_RS17670 d8ecf96b0df80a80aa7c1815ebc43c2f 313 Gene3D G3DSA:1.10.3720.10 28 309 8.8E-34 T 29-03-2018 AM460_RS17670 d8ecf96b0df80a80aa7c1815ebc43c2f 313 SUPERFAMILY SSF161098 33 307 8.24E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS17670 d8ecf96b0df80a80aa7c1815ebc43c2f 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 307 1.8E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 SMART SM00421 135 192 5.6E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 SUPERFAMILY SSF46894 126 186 8.16E-11 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 3.2E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.2E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.2E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.2E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 Gene3D G3DSA:1.10.10.10 20 199 3.6E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14885 cf61ccb84f9c32de49f490926c6b8ca3 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 49.344 T 29-03-2018 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 AM460_RS22045 d48fa010ac54350069b258ae5dacfefb 300 SUPERFAMILY SSF56059 98 288 9.16E-50 T 29-03-2018 AM460_RS22045 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.1490.20 115 170 2.2E-12 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS22045 d48fa010ac54350069b258ae5dacfefb 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.195 T 29-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AM460_RS22045 d48fa010ac54350069b258ae5dacfefb 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 6.7E-98 T 29-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AM460_RS22045 d48fa010ac54350069b258ae5dacfefb 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 1.6E-83 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AM460_RS22045 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.40.50.20 1 114 1.2E-32 T 29-03-2018 AM460_RS22045 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.470.20 171 277 2.1E-34 T 29-03-2018 AM460_RS26565 222dd763a49d5adcf73c95f36738cfdb 420 Gene3D G3DSA:3.90.350.10 108 345 6.2E-15 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AM460_RS26565 222dd763a49d5adcf73c95f36738cfdb 420 SUPERFAMILY SSF53098 86 367 2.81E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS26565 222dd763a49d5adcf73c95f36738cfdb 420 Pfam PF13701 Transposase DDE domain group 1 4 418 1.7E-54 T 29-03-2018 IPR025668 Transposase DDE domain AM460_RS01175 318502bac10cf48ee99b7b70eaf4d0c1 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS01175 318502bac10cf48ee99b7b70eaf4d0c1 255 Pfam PF00005 ABC transporter 18 166 2.5E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS01175 318502bac10cf48ee99b7b70eaf4d0c1 255 Gene3D G3DSA:3.40.50.300 1 241 6.1E-64 T 29-03-2018 AM460_RS01175 318502bac10cf48ee99b7b70eaf4d0c1 255 SUPERFAMILY SSF52540 3 227 2.66E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01175 318502bac10cf48ee99b7b70eaf4d0c1 255 SMART SM00382 27 215 3.4E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 Gene3D G3DSA:1.20.1540.10 11 204 3.5E-34 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 Gene3D G3DSA:2.130.10.10 270 362 2.0E-9 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 Pfam PF01694 Rhomboid family 59 202 3.3E-28 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 SUPERFAMILY SSF51004 295 480 1.15E-35 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 SUPERFAMILY SSF51004 533 595 1.15E-35 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 361 398 3.2E-7 T 29-03-2018 IPR011964 YVTN beta-propeller repeat AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 SUPERFAMILY SSF144091 12 204 1.15E-38 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 Gene3D G3DSA:2.130.10.10 363 499 1.3E-21 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM460_RS23105 5de72dbc9c8bcee6e225e1ae87b550f8 625 Gene3D G3DSA:2.130.10.10 500 622 1.4E-7 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM460_RS04315 f9de714674d1b64ac6831b260f357baa 93 Gene3D G3DSA:3.10.50.40 1 93 7.1E-30 T 29-03-2018 AM460_RS04315 f9de714674d1b64ac6831b260f357baa 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM460_RS04315 f9de714674d1b64ac6831b260f357baa 93 SUPERFAMILY SSF54534 5 90 2.03E-28 T 29-03-2018 AM460_RS04315 f9de714674d1b64ac6831b260f357baa 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.5E-20 T 29-03-2018 AM460_RS15275 339ad9348ea2548cbaf5286144780d35 97 Gene3D G3DSA:3.30.50.20 21 94 6.7E-27 T 29-03-2018 AM460_RS15275 339ad9348ea2548cbaf5286144780d35 97 Pfam PF07102 Protein of unknown function (DUF1364) 5 94 9.1E-40 T 29-03-2018 IPR010774 Protein of unknown function DUF1364 AM460_RS14380 e22d68c14338c150e87f17874532f2e0 144 SUPERFAMILY SSF52540 6 90 1.19E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14380 e22d68c14338c150e87f17874532f2e0 144 Gene3D G3DSA:3.40.50.300 51 140 3.6E-7 T 29-03-2018 AM460_RS14380 e22d68c14338c150e87f17874532f2e0 144 Gene3D G3DSA:3.40.50.300 15 50 6.7E-4 T 29-03-2018 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF81301 180 392 1.52E-62 T 29-03-2018 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF109604 3 190 2.32E-75 T 29-03-2018 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF13328 HD domain 26 175 3.0E-53 T 29-03-2018 IPR003607 HD/PDEase domain AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 SMART SM00954 235 345 2.8E-63 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF02824 TGS domain 388 447 2.3E-21 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF81271 375 447 3.71E-21 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF55021 627 699 1.51E-5 T 29-03-2018 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 SMART SM00471 41 153 1.2E-11 T 29-03-2018 IPR003607 HD/PDEase domain AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF13291 ACT domain 622 699 3.1E-15 T 29-03-2018 IPR002912 ACT domain AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 Gene3D G3DSA:3.30.70.260 623 701 4.0E-9 T 29-03-2018 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 1.3E-294 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 Gene3D G3DSA:3.10.20.30 382 457 6.3E-24 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 Gene3D G3DSA:3.30.460.10 188 325 2.2E-40 T 29-03-2018 AM460_RS05000 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.1E-35 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM460_RS11720 e79b8fb4bb40a2661891fbf8ae3aff44 426 SUPERFAMILY SSF63520 231 333 1.2E-15 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS11720 e79b8fb4bb40a2661891fbf8ae3aff44 426 Gene3D G3DSA:1.10.1790.10 228 333 9.6E-14 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS11720 e79b8fb4bb40a2661891fbf8ae3aff44 426 Gene3D G3DSA:1.10.1790.10 124 222 0.0055 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS11720 e79b8fb4bb40a2661891fbf8ae3aff44 426 Pfam PF00874 PRD domain 240 328 2.0E-11 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS11720 e79b8fb4bb40a2661891fbf8ae3aff44 426 Pfam PF00874 PRD domain 131 216 2.3E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 AM460_RS05985 ec0fed6b8c6ce41aadb12d029a28de12 157 Gene3D G3DSA:3.40.930.10 5 153 2.0E-29 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS05985 ec0fed6b8c6ce41aadb12d029a28de12 157 SUPERFAMILY SSF55804 6 150 2.75E-34 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS05985 ec0fed6b8c6ce41aadb12d029a28de12 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 1.8E-30 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS24855 c98341a196236c46f9bdee8967006508 78 SUPERFAMILY SSF159871 4 78 3.66E-12 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS24855 c98341a196236c46f9bdee8967006508 78 Gene3D G3DSA:3.30.1660.10 16 78 1.8E-12 T 29-03-2018 IPR025543 Dodecin-like AM460_RS24855 c98341a196236c46f9bdee8967006508 78 Pfam PF07338 Protein of unknown function (DUF1471) 30 78 1.6E-11 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 Gene3D G3DSA:3.30.950.10 122 237 2.1E-41 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 5.4E-117 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 29-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 SUPERFAMILY SSF53790 12 232 1.2E-84 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 Gene3D G3DSA:3.40.1010.10 11 121 2.6E-45 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.785 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 PIRSF PIRSF005917 1 287 1.7E-108 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM460_RS07730 4f5bdf082f86f666cba913ccd8fdc039 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 2.1E-29 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM460_RS05915 5c3e9984919757f7cc69deb288ba224a 144 PIRSF PIRSF006276 1 141 4.1E-54 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS05915 5c3e9984919757f7cc69deb288ba224a 144 Pfam PF00582 Universal stress protein family 3 138 2.5E-21 T 29-03-2018 IPR006016 UspA GO:0006950 AM460_RS05915 5c3e9984919757f7cc69deb288ba224a 144 Gene3D G3DSA:3.40.50.620 2 142 1.4E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS05915 5c3e9984919757f7cc69deb288ba224a 144 SUPERFAMILY SSF52402 3 139 1.59E-32 T 29-03-2018 AM460_RS19450 8caa558786cf6eb2a654ed44541e2b96 114 Pfam PF13436 Glycine-zipper domain 25 61 0.035 T 29-03-2018 IPR025693 Glycine-zipper-containing OmpA-like membrane domain AM460_RS19450 8caa558786cf6eb2a654ed44541e2b96 114 Hamap MF_01455 UPF0757 protein YmgG [ymgG]. 1 114 27.322 T 29-03-2018 IPR022833 Uncharacterised protein family UPF0757, YmgG AM460_RS19450 8caa558786cf6eb2a654ed44541e2b96 114 Pfam PF13488 Glycine zipper 74 113 3.4E-5 T 29-03-2018 AM460_RS23585 c4af6b2f628f68b91edece08f2f35a29 415 Pfam PF00924 Mechanosensitive ion channel 142 396 8.3E-72 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM460_RS23585 c4af6b2f628f68b91edece08f2f35a29 415 Gene3D G3DSA:3.30.70.100 314 395 2.2E-4 T 29-03-2018 AM460_RS23585 c4af6b2f628f68b91edece08f2f35a29 415 Gene3D G3DSA:2.30.30.60 202 252 9.4E-10 T 29-03-2018 AM460_RS23585 c4af6b2f628f68b91edece08f2f35a29 415 SUPERFAMILY SSF82689 317 395 1.19E-6 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM460_RS23585 c4af6b2f628f68b91edece08f2f35a29 415 SUPERFAMILY SSF50182 187 253 4.58E-12 T 29-03-2018 IPR010920 LSM domain AM460_RS16040 211848ef8c588fbb09078ee3f61f7680 393 Gene3D G3DSA:1.20.1250.20 201 392 5.1E-19 T 29-03-2018 AM460_RS16040 211848ef8c588fbb09078ee3f61f7680 393 SUPERFAMILY SSF103473 7 389 1.44E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS16040 211848ef8c588fbb09078ee3f61f7680 393 Pfam PF07690 Major Facilitator Superfamily 23 349 9.3E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS16040 211848ef8c588fbb09078ee3f61f7680 393 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 3.5E-150 T 29-03-2018 IPR004747 Cyanate transport system protein GO:0016021 AM460_RS16040 211848ef8c588fbb09078ee3f61f7680 393 Gene3D G3DSA:1.20.1250.20 8 200 1.0E-15 T 29-03-2018 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 2.1E-6 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Pfam PF01568 Molydopterin dinucleotide binding domain 670 779 8.8E-24 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Gene3D G3DSA:3.40.228.10 179 443 6.4E-60 T 29-03-2018 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Gene3D G3DSA:3.40.228.10 590 653 9.9E-10 T 29-03-2018 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Gene3D G3DSA:3.90.55.10 520 589 5.6E-20 T 29-03-2018 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Gene3D G3DSA:3.90.55.10 35 121 1.0E-12 T 29-03-2018 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 493 510 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Pfam PF00384 Molybdopterin oxidoreductase 84 550 2.3E-102 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 709 736 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 SUPERFAMILY SSF53706 44 657 1.31E-160 T 29-03-2018 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 41 808 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Gene3D G3DSA:3.40.228.10 444 519 5.4E-7 T 29-03-2018 AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 SUPERFAMILY SSF50692 661 806 2.94E-38 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS15610 04e534236deefdbfc0e02a02b6a3ebe3 809 Gene3D G3DSA:2.40.40.20 654 802 1.1E-30 T 29-03-2018 AM460_RS24275 d0833891d080e8d8c4d30708235cc4e1 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 4.5E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24275 d0833891d080e8d8c4d30708235cc4e1 324 PRINTS PR00069 Aldo-keto reductase signature 230 254 4.5E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24275 d0833891d080e8d8c4d30708235cc4e1 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 4.5E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24275 d0833891d080e8d8c4d30708235cc4e1 324 PRINTS PR00069 Aldo-keto reductase signature 47 71 4.5E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24275 d0833891d080e8d8c4d30708235cc4e1 324 SUPERFAMILY SSF51430 1 321 1.17E-101 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24275 d0833891d080e8d8c4d30708235cc4e1 324 Pfam PF00248 Aldo/keto reductase family 15 312 7.7E-74 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24275 d0833891d080e8d8c4d30708235cc4e1 324 Gene3D G3DSA:3.20.20.100 1 321 4.2E-99 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 Gene3D G3DSA:3.40.1060.10 240 371 2.9E-45 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 SUPERFAMILY SSF53732 10 625 7.85E-224 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 Pfam PF00694 Aconitase C-terminal domain 691 818 1.3E-51 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 Gene3D G3DSA:3.20.19.10 652 891 1.0E-94 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 Gene3D G3DSA:3.30.499.10 33 239 2.1E-74 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 29-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 SUPERFAMILY SSF52016 630 890 1.2E-90 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 Gene3D G3DSA:3.30.499.10 372 576 9.8E-62 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 217 232 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 431 442 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 279 292 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 293 306 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 146 159 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 203 216 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 493 506 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 170 178 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 PRINTS PR00415 Aconitase family signature 372 386 1.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS18260 fdfef85d208d5c8501d7f2b85cbb729b 891 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 1.4E-181 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 204 2.4E-87 T 29-03-2018 IPR015796 Impact family, bacterial/archaeal AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 SUPERFAMILY SSF54980 136 203 1.04E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 SUPERFAMILY SSF54211 3 131 2.77E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 6.2E-15 T 29-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 Gene3D G3DSA:3.30.70.240 136 199 1.0E-19 T 29-03-2018 AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 29-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 Gene3D G3DSA:3.30.230.30 7 133 5.8E-38 T 29-03-2018 IPR001498 Impact, N-terminal AM460_RS03850 9b30ade4b687437cf107a828e2fd7668 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 1.7E-27 T 29-03-2018 IPR001498 Impact, N-terminal AM460_RS20955 2ba027741c74212cdcd1ec0f458d9326 754 Pfam PF00753 Metallo-beta-lactamase superfamily 505 684 1.6E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS20955 2ba027741c74212cdcd1ec0f458d9326 754 Gene3D G3DSA:3.60.15.10 494 694 2.3E-21 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS20955 2ba027741c74212cdcd1ec0f458d9326 754 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 405 2.7E-60 T 29-03-2018 IPR004477 ComEC/Rec2-related protein AM460_RS20955 2ba027741c74212cdcd1ec0f458d9326 754 SMART SM00849 508 689 1.7E-8 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS20955 2ba027741c74212cdcd1ec0f458d9326 754 Pfam PF03772 Competence protein 201 468 1.3E-53 T 29-03-2018 IPR004477 ComEC/Rec2-related protein AM460_RS20955 2ba027741c74212cdcd1ec0f458d9326 754 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 65 718 0.0 T 29-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AM460_RS20955 2ba027741c74212cdcd1ec0f458d9326 754 SUPERFAMILY SSF56281 495 742 3.54E-45 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 SUPERFAMILY SSF81338 9 257 1.7E-79 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 4.7E-76 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.5E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 9 28 6.5E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 48 72 6.5E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 184 206 6.5E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 151 169 6.5E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 85 104 6.5E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 Pfam PF00230 Major intrinsic protein 2 251 1.7E-77 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 ProSitePatterns PS00221 MIP family signature. 66 74 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS03440 68d36bdf68da9f1e979bef074c6ede8a 281 Gene3D G3DSA:1.20.1080.10 1 259 5.2E-78 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 4.5E-42 T 29-03-2018 IPR025199 DNA translocase FtsK, 4TM region AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 Pfam PF09397 Ftsk gamma domain 1303 1363 2.2E-28 T 29-03-2018 IPR018541 FtsK gamma domain AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 Gene3D G3DSA:3.40.50.300 645 1238 1.8E-55 T 29-03-2018 AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 SUPERFAMILY SSF52540 961 1273 5.65E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 Pfam PF01580 FtsK/SpoIIIE family 987 1200 1.7E-76 T 29-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 Gene3D G3DSA:1.10.10.10 1303 1357 4.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 SMART SM00843 1301 1366 4.4E-42 T 29-03-2018 IPR018541 FtsK gamma domain AM460_RS21835 d2b1b9e93ea39ea89d973fcf57ebd012 1368 SUPERFAMILY SSF46785 1302 1365 4.81E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-28 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 Gene3D G3DSA:2.60.300.12 1 101 1.2E-15 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 Gene3D G3DSA:3.30.300.130 102 187 8.3E-26 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.432 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 9.2E-13 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF89360 1 97 2.16E-20 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.7E-100 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF117916 95 184 2.14E-25 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AM460_RS06325 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01106 NifU-like domain 111 177 2.6E-20 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM460_RS01600 1c82e6ec7a4b5dfe9ddcca7d3d440604 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 2.0E-72 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM460_RS01600 1c82e6ec7a4b5dfe9ddcca7d3d440604 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 7.0E-68 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM460_RS01600 1c82e6ec7a4b5dfe9ddcca7d3d440604 212 Gene3D G3DSA:3.30.1060.10 26 204 1.4E-79 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM460_RS01600 1c82e6ec7a4b5dfe9ddcca7d3d440604 212 SUPERFAMILY SSF55068 5 208 2.09E-85 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM460_RS01600 1c82e6ec7a4b5dfe9ddcca7d3d440604 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.946 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM460_RS02930 79bede3bffa4ccddd28601448f999cd8 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 9.1E-36 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM460_RS02930 79bede3bffa4ccddd28601448f999cd8 543 SUPERFAMILY SSF109755 321 531 2.93E-23 T 29-03-2018 AM460_RS02930 79bede3bffa4ccddd28601448f999cd8 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 2.1E-136 T 29-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AM460_RS02930 79bede3bffa4ccddd28601448f999cd8 543 Gene3D G3DSA:1.20.58.220 322 431 8.8E-9 T 29-03-2018 AM460_RS02930 79bede3bffa4ccddd28601448f999cd8 543 Gene3D G3DSA:1.20.58.220 432 543 7.9E-9 T 29-03-2018 AM460_RS02930 79bede3bffa4ccddd28601448f999cd8 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 1.7E-171 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM460_RS12795 c4cdd1b70c465cb610c9f2b2a1983a58 260 SMART SM00062 27 256 4.4E-72 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS12795 c4cdd1b70c465cb610c9f2b2a1983a58 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM460_RS12795 c4cdd1b70c465cb610c9f2b2a1983a58 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 6.1E-102 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM460_RS12795 c4cdd1b70c465cb610c9f2b2a1983a58 260 SUPERFAMILY SSF53850 1 257 6.29E-66 T 29-03-2018 AM460_RS12795 c4cdd1b70c465cb610c9f2b2a1983a58 260 Gene3D G3DSA:3.40.190.10 141 259 1.3E-16 T 29-03-2018 AM460_RS12795 c4cdd1b70c465cb610c9f2b2a1983a58 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.0E-63 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS12795 c4cdd1b70c465cb610c9f2b2a1983a58 260 Gene3D G3DSA:3.40.190.10 15 140 1.0E-35 T 29-03-2018 AM460_RS01795 df32f84329089de32d34aa092a2ddb65 109 SUPERFAMILY SSF159871 11 108 7.72E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS01795 df32f84329089de32d34aa092a2ddb65 109 Pfam PF07338 Protein of unknown function (DUF1471) 53 108 1.8E-14 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS01795 df32f84329089de32d34aa092a2ddb65 109 Gene3D G3DSA:3.30.1660.10 42 108 5.8E-17 T 29-03-2018 IPR025543 Dodecin-like AM460_RS06465 7c435a37715739c5c4f923a21d4deadc 134 Pfam PF10748 Protein of unknown function (DUF2531) 3 134 3.4E-69 T 29-03-2018 IPR019684 HofP protein AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 3.2E-155 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 Gene3D G3DSA:3.65.10.10 21 227 8.8E-66 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 Gene3D G3DSA:3.65.10.10 228 425 1.4E-70 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 SUPERFAMILY SSF55205 1 423 2.22E-146 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 1.9E-141 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 PIRSF PIRSF000505 1 427 1.4E-157 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM460_RS21260 cb76974c69dfa91dbb3a9bac459595ff 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.934 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 PRINTS PR00721 Stomatin signature 102 124 9.2E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 PRINTS PR00721 Stomatin signature 184 201 9.2E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 PRINTS PR00721 Stomatin signature 149 170 9.2E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 Pfam PF01145 SPFH domain / Band 7 family 99 270 3.8E-31 T 29-03-2018 IPR001107 Band 7 domain AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 TIGRFAM TIGR01933 hflK: HflK protein 97 356 8.6E-126 T 29-03-2018 IPR010201 HflK GO:0016021 AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 SUPERFAMILY SSF117892 128 259 4.58E-21 T 29-03-2018 IPR001107 Band 7 domain AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 Pfam PF12221 Bacterial membrane protein N terminal 1 59 4.5E-15 T 29-03-2018 IPR020980 Menbrane protein HflK, N-terminal AM460_RS01880 1691e9cc01d400a451a98a4ab316455c 419 SMART SM00244 95 255 1.0E-44 T 29-03-2018 IPR001107 Band 7 domain AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.6E-18 T 29-03-2018 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 4.6E-18 T 29-03-2018 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.6E-18 T 29-03-2018 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 4.6E-18 T 29-03-2018 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 Pfam PF01494 FAD binding domain 6 338 8.9E-29 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 Gene3D G3DSA:3.50.50.60 4 362 3.6E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 8.3E-133 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 SUPERFAMILY SSF51905 6 178 1.41E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS23075 6a8ea10d2407fba8d6bc36e678df8a2f 391 SUPERFAMILY SSF51905 267 383 1.41E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 SMART SM00420 11 63 1.7E-24 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 Gene3D G3DSA:3.40.50.1360 80 237 2.3E-37 T 29-03-2018 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 7.2E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 7.2E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 SUPERFAMILY SSF100950 80 238 8.37E-26 T 29-03-2018 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 Pfam PF00455 DeoR C terminal sensor domain 80 236 5.8E-46 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 SUPERFAMILY SSF46785 9 73 2.93E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 1.8E-23 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 SMART SM01134 77 238 2.3E-58 T 29-03-2018 AM460_RS03725 b107dee448b5ebcf115bb700ec8f441a 262 Gene3D G3DSA:1.10.10.10 5 79 2.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26275 181f4cd20a700618b6ed61687f0bd4be 304 Gene3D G3DSA:3.90.245.10 2 303 3.2E-97 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS26275 181f4cd20a700618b6ed61687f0bd4be 304 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AM460_RS26275 181f4cd20a700618b6ed61687f0bd4be 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 79.436 T 29-03-2018 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 AM460_RS26275 181f4cd20a700618b6ed61687f0bd4be 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 2.7E-81 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS26275 181f4cd20a700618b6ed61687f0bd4be 304 SUPERFAMILY SSF53590 4 300 6.8E-96 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 1.0E-18 T 29-03-2018 AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 Gene3D G3DSA:3.30.70.20 74 199 3.1E-4 T 29-03-2018 AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.44 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 3.2E-23 T 29-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 7.6E-154 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 SUPERFAMILY SSF46548 139 256 1.46E-18 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS01920 50eab1a0dfb4f84b37dd9ba1e722855e 379 Gene3D G3DSA:3.30.70.20 200 360 1.5E-10 T 29-03-2018 AM460_RS13325 e7e732f195c2b45b50d9be60c9a66db8 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 1.8E-78 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AM460_RS13325 e7e732f195c2b45b50d9be60c9a66db8 200 SUPERFAMILY SSF48695 17 196 1.09E-64 T 29-03-2018 IPR011031 Multihaem cytochrome AM460_RS13325 e7e732f195c2b45b50d9be60c9a66db8 200 Gene3D G3DSA:1.10.468.10 63 197 8.2E-30 T 29-03-2018 AM460_RS13325 e7e732f195c2b45b50d9be60c9a66db8 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 5.7E-106 T 29-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 AM460_RS13325 e7e732f195c2b45b50d9be60c9a66db8 200 PIRSF PIRSF000013 1 200 5.7E-108 T 29-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 Gene3D G3DSA:1.20.200.10 108 375 1.1E-96 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.6E-24 T 29-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 Pfam PF00206 Lyase 6 301 2.4E-102 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 8.9E-216 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 SUPERFAMILY SSF48557 3 456 2.04E-143 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 Gene3D G3DSA:1.10.275.10 2 107 1.8E-32 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.643 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 4.0E-68 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 4.0E-68 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 4.0E-68 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 4.0E-68 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 4.0E-68 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.0E-68 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 Gene3D G3DSA:1.10.40.30 376 433 2.1E-25 T 29-03-2018 AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.4E-29 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.4E-29 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.4E-29 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS03270 966c539e7f986c424390b81b9ecceacc 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.4E-29 T 29-03-2018 IPR000362 Fumarate lyase family AM460_RS03115 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF48300 3 57 5.62E-16 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03115 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:1.20.5.710 2 50 4.8E-17 T 29-03-2018 AM460_RS03115 951984a24105ceca351709a149fd5e19 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 5.4E-31 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03115 951984a24105ceca351709a149fd5e19 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.446 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03115 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:3.30.1390.10 51 121 7.8E-31 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM460_RS03115 951984a24105ceca351709a149fd5e19 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 8.4E-48 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03115 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF54736 50 121 3.49E-25 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM460_RS03115 951984a24105ceca351709a149fd5e19 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 100 4.0E-17 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03115 951984a24105ceca351709a149fd5e19 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 4.4E-15 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS05785 d2a66d40466d5cd7424eb1c172bed1e1 108 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 103 26.215 T 29-03-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 AM460_RS05785 d2a66d40466d5cd7424eb1c172bed1e1 108 Gene3D G3DSA:1.10.890.10 27 100 3.5E-21 T 29-03-2018 AM460_RS05785 d2a66d40466d5cd7424eb1c172bed1e1 108 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 1 108 2.0E-59 T 29-03-2018 AM460_RS05785 d2a66d40466d5cd7424eb1c172bed1e1 108 Pfam PF06411 HdeA/HdeB family 15 96 2.0E-24 T 29-03-2018 IPR010486 HNS-dependent expression A/B AM460_RS08935 b869a37ae4788a78fe6ba15c5484c53f 65 Gene3D G3DSA:2.20.20.30 2 29 5.7E-4 T 29-03-2018 AM460_RS01085 b869a37ae4788a78fe6ba15c5484c53f 65 Gene3D G3DSA:2.20.20.30 2 29 5.7E-4 T 29-03-2018 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 SUPERFAMILY SSF53383 20 401 4.89E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 6.8E-150 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 PIRSF PIRSF000521 28 129 2.9E-6 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 PIRSF PIRSF000521 124 157 0.11 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 PIRSF PIRSF000521 174 403 1.4E-37 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.938 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 Gene3D G3DSA:3.90.1150.10 294 403 9.9E-13 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.3E-205 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 Gene3D G3DSA:3.40.640.10 176 293 2.7E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 Gene3D G3DSA:3.90.1150.10 2 175 5.6E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS06605 2b3c109dbca4627e16ff7374f25101c8 406 Pfam PF00202 Aminotransferase class-III 26 400 5.0E-144 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS13400 97c3950730c482500df03b8d263116d4 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.6E-97 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM460_RS13400 97c3950730c482500df03b8d263116d4 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 47.377 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM460_RS04165 663ee8e2f3a70bbfd9892d2327e026b0 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.2E-38 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS04165 663ee8e2f3a70bbfd9892d2327e026b0 246 Gene3D G3DSA:3.40.50.10090 1 121 4.8E-17 T 29-03-2018 AM460_RS04165 663ee8e2f3a70bbfd9892d2327e026b0 246 Gene3D G3DSA:3.40.50.10090 122 246 2.7E-20 T 29-03-2018 AM460_RS04165 663ee8e2f3a70bbfd9892d2327e026b0 246 SUPERFAMILY SSF69618 1 245 3.14E-52 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM460_RS16130 bf49a55706e86d7b4b4333a071a60568 278 Gene3D G3DSA:3.20.20.70 1 278 4.0E-81 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS16130 bf49a55706e86d7b4b4333a071a60568 278 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 276 1.4E-87 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS16130 bf49a55706e86d7b4b4333a071a60568 278 SUPERFAMILY SSF51569 2 277 1.39E-82 T 29-03-2018 AM460_RS16130 bf49a55706e86d7b4b4333a071a60568 278 PIRSF PIRSF001359 1 277 1.3E-76 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS16130 bf49a55706e86d7b4b4333a071a60568 278 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 277 1.1E-97 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS10155 d314fb22fdca72d6e5187033e7f9ded3 163 SUPERFAMILY SSF141452 2 160 5.62E-46 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS10155 d314fb22fdca72d6e5187033e7f9ded3 163 Gene3D G3DSA:2.30.110.20 1 162 2.4E-53 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS10155 d314fb22fdca72d6e5187033e7f9ded3 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 1.8E-51 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS10155 d314fb22fdca72d6e5187033e7f9ded3 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 4.3E-38 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS06555 76ba5d1213b18a531b417abd1f61de8f 55 Pfam PF13978 Protein of unknown function (DUF4223) 1 54 9.4E-36 T 29-03-2018 IPR025318 Protein of unknown function DUF4223 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 Gene3D G3DSA:2.40.160.10 10 373 1.7E-50 T 29-03-2018 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 9.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 9.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 276 295 9.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 247 264 9.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 148 170 9.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 9.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 325 341 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 Pfam PF00267 Gram-negative porin 27 373 3.0E-149 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 325 342 9.5E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 241 253 9.5E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 9.5E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 9.5E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 9.5E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS13255 2e64175183b1dd3e3456261e33b39a30 373 SUPERFAMILY SSF56935 22 373 2.59E-79 T 29-03-2018 AM460_RS03275 36df0518b37fd525737364e64ecd8097 258 Gene3D G3DSA:3.40.1160.10 1 258 2.6E-46 T 29-03-2018 AM460_RS03275 36df0518b37fd525737364e64ecd8097 258 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 258 27.161 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS03275 36df0518b37fd525737364e64ecd8097 258 SUPERFAMILY SSF53633 1 256 2.36E-62 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS03275 36df0518b37fd525737364e64ecd8097 258 PIRSF PIRSF000728 1 258 1.5E-74 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS03275 36df0518b37fd525737364e64ecd8097 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 1.0E-78 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM460_RS03275 36df0518b37fd525737364e64ecd8097 258 Pfam PF00696 Amino acid kinase family 5 235 6.2E-39 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 Pfam PF01420 Type I restriction modification DNA specificity domain 213 399 2.8E-11 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 Pfam PF01420 Type I restriction modification DNA specificity domain 15 192 1.9E-21 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 Gene3D G3DSA:3.10.450.120 181 206 3.2E-16 T 29-03-2018 AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 Gene3D G3DSA:3.10.450.120 382 422 2.8E-18 T 29-03-2018 AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 SUPERFAMILY SSF116734 212 416 9.16E-31 T 29-03-2018 AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 SUPERFAMILY SSF116734 15 210 1.34E-42 T 29-03-2018 AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 Gene3D G3DSA:3.90.220.20 207 381 5.2E-26 T 29-03-2018 AM460_RS27750 d53e2e2ad67aed98896d1f4b63b727ce 423 Gene3D G3DSA:3.90.220.20 4 180 2.0E-35 T 29-03-2018 AM460_RS08275 135acfe77fd01b4f6fd8fc0fe00e9efd 840 Pfam PF13954 PapC N-terminal domain 37 181 1.2E-35 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS08275 135acfe77fd01b4f6fd8fc0fe00e9efd 840 SUPERFAMILY SSF141729 35 157 1.44E-29 T 29-03-2018 AM460_RS08275 135acfe77fd01b4f6fd8fc0fe00e9efd 840 Pfam PF00577 Outer membrane usher protein 199 752 7.4E-171 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS08275 135acfe77fd01b4f6fd8fc0fe00e9efd 840 Pfam PF13953 PapC C-terminal domain 765 819 2.4E-10 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS08275 135acfe77fd01b4f6fd8fc0fe00e9efd 840 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM460_RS05085 dd6481bef3d12aad924e892d84a04e7f 425 Gene3D G3DSA:3.40.50.2000 50 218 4.0E-5 T 29-03-2018 AM460_RS05085 dd6481bef3d12aad924e892d84a04e7f 425 Gene3D G3DSA:3.40.50.2000 219 402 7.5E-15 T 29-03-2018 AM460_RS05085 dd6481bef3d12aad924e892d84a04e7f 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 4.7E-67 T 29-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AM460_RS05085 dd6481bef3d12aad924e892d84a04e7f 425 Pfam PF00534 Glycosyl transferases group 1 240 398 1.1E-11 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM460_RS05085 dd6481bef3d12aad924e892d84a04e7f 425 SUPERFAMILY SSF53756 57 420 2.06E-19 T 29-03-2018 AM460_RS25705 7a19fc763018cea7a941ca7feb7122bf 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM460_RS25705 7a19fc763018cea7a941ca7feb7122bf 220 Pfam PF00484 Carbonic anhydrase 38 187 2.5E-50 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM460_RS25705 7a19fc763018cea7a941ca7feb7122bf 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM460_RS25705 7a19fc763018cea7a941ca7feb7122bf 220 SMART SM00947 30 192 1.3E-69 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM460_RS25705 7a19fc763018cea7a941ca7feb7122bf 220 Gene3D G3DSA:3.40.1050.10 1 220 8.0E-74 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM460_RS25705 7a19fc763018cea7a941ca7feb7122bf 220 SUPERFAMILY SSF53056 2 211 3.4E-74 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.7E-109 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.418 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 Pfam PF00318 Ribosomal protein S2 9 224 4.8E-94 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:3.40.50.10490 5 241 1.9E-96 T 29-03-2018 AM460_RS25460 f0974d30d7835f4b52b27c2f40e89ca4 241 SUPERFAMILY SSF52313 6 235 1.96E-96 T 29-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 345 4.1E-106 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 6.6E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 6.6E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 6.6E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.6E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 6.6E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 SUPERFAMILY SSF160544 249 352 4.32E-36 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM460_RS25165 8e5afe7eff39e285c5bb3454e21225a7 379 Gene3D G3DSA:3.40.1690.10 216 351 2.1E-50 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 SUPERFAMILY SSF51366 257 450 1.18E-55 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 Gene3D G3DSA:3.20.20.70 1 259 1.6E-64 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 35.775 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 447 4.5E-63 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 SUPERFAMILY SSF51366 1 251 1.41E-86 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 1.3E-100 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 Gene3D G3DSA:3.20.20.70 260 452 3.5E-54 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS18365 17341bbe476ff7a31c6fd3b0f138f0b0 452 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 452 28.464 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM460_RS13660 034812e0808f904f3a4bfabed5cd83dc 132 Pfam PF03788 LrgA family 23 113 8.1E-29 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 AM460_RS13660 034812e0808f904f3a4bfabed5cd83dc 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.864 T 29-03-2018 IPR022957 Uncharacterised protein family UPF0299 AM460_RS15630 d5971cb14f229cf685c646e5c74c28dd 272 Pfam PF01904 Protein of unknown function DUF72 21 248 2.1E-51 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM460_RS15630 d5971cb14f229cf685c646e5c74c28dd 272 Gene3D G3DSA:3.20.20.410 1 256 2.5E-61 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM460_RS15630 d5971cb14f229cf685c646e5c74c28dd 272 SUPERFAMILY SSF117396 1 253 3.92E-65 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 Gene3D G3DSA:1.20.1250.20 1 188 5.8E-24 T 29-03-2018 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 SUPERFAMILY SSF103473 3 188 3.14E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 SUPERFAMILY SSF103473 245 416 3.14E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 SUPERFAMILY SSF103473 476 499 3.14E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 8 495 5.2E-121 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 Pfam PF07690 Major Facilitator Superfamily 13 406 4.6E-40 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 9.7E-7 T 29-03-2018 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 102 122 9.7E-7 T 29-03-2018 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 9.7E-7 T 29-03-2018 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 11 35 9.7E-7 T 29-03-2018 AM460_RS17935 c49bac9f66a4f786db1dc62b38f167bc 503 Gene3D G3DSA:1.20.1250.20 256 503 1.9E-25 T 29-03-2018 AM460_RS24305 38a74cb1c9ac64e2eec5a461bd6814cf 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.9E-78 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM460_RS24305 38a74cb1c9ac64e2eec5a461bd6814cf 149 Pfam PF03477 ATP cone domain 50 136 2.6E-15 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM460_RS24305 38a74cb1c9ac64e2eec5a461bd6814cf 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.122 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM460_RS08530 5bdaec02fb5a7e801d2c81806ddbaf51 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 91 204 5.5E-35 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM460_RS08530 5bdaec02fb5a7e801d2c81806ddbaf51 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 9.1E-104 T 29-03-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 AM460_RS10885 4bc43a96b1c4485868d8c1292dda1511 330 SUPERFAMILY SSF53850 24 328 2.61E-97 T 29-03-2018 AM460_RS10885 4bc43a96b1c4485868d8c1292dda1511 330 Gene3D G3DSA:3.40.190.10 22 156 2.4E-16 T 29-03-2018 AM460_RS10885 4bc43a96b1c4485868d8c1292dda1511 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 312 6.4E-57 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM460_RS10885 4bc43a96b1c4485868d8c1292dda1511 330 Gene3D G3DSA:3.40.190.10 157 325 1.6E-35 T 29-03-2018 AM460_RS24535 5ea340c51efaa3815e7d2383bd85ab3b 275 SUPERFAMILY SSF161098 75 258 1.96E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS24535 5ea340c51efaa3815e7d2383bd85ab3b 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 2.9E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS24535 5ea340c51efaa3815e7d2383bd85ab3b 275 Gene3D G3DSA:1.10.3720.10 21 273 5.6E-32 T 29-03-2018 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 Gene3D G3DSA:3.30.565.10 315 472 6.5E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 SUPERFAMILY SSF103190 76 177 1.96E-11 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 SUPERFAMILY SSF47384 241 320 1.53E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 319 1.3E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 SMART SM00304 204 255 7.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 SMART SM00387 363 473 2.9E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 SMART SM00388 255 320 2.2E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 Gene3D G3DSA:3.30.450.20 28 177 3.8E-25 T 29-03-2018 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 SUPERFAMILY SSF55874 311 469 1.22E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 462 1.6E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 Gene3D G3DSA:1.10.287.130 235 314 6.9E-10 T 29-03-2018 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 7.3E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 7.3E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS00125 9ce676966de633009ff1eb106a0c43bc 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 7.3E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS27445 796601f267e561a31f39ed3a29ad8a2d 460 Pfam PF06122 Conjugative relaxosome accessory transposon protein 32 380 3.3E-114 T 29-03-2018 IPR010927 Type IV conjugative transfer system protein TraH AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 Pfam PF08442 ATP-grasp domain 2 203 5.5E-83 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 Pfam PF00549 CoA-ligase 262 382 2.1E-24 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.40.50.261 240 385 7.9E-42 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 SUPERFAMILY SSF56059 1 238 2.65E-81 T 29-03-2018 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.30.1490.20 21 95 3.3E-25 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 SUPERFAMILY SSF52210 239 385 9.81E-53 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.353 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.30.470.20 96 239 7.3E-52 T 29-03-2018 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.9E-183 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 PIRSF PIRSF001554 1 388 2.3E-154 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM460_RS22710 d3e359441fbb6d15ad5d4ade4c910750 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS18340 8c594a998eee7b31f51598408074e2db 206 SUPERFAMILY SSF55821 1 204 2.66E-66 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS18340 8c594a998eee7b31f51598408074e2db 206 Gene3D G3DSA:3.90.870.10 1 206 3.0E-61 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS18340 8c594a998eee7b31f51598408074e2db 206 Pfam PF01300 Telomere recombination 23 198 2.1E-46 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AM460_RS18340 8c594a998eee7b31f51598408074e2db 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 204 6.8E-80 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AM460_RS11970 d0a863af2c08e2bba635085fb5147e18 156 SUPERFAMILY SSF52833 3 154 3.14E-50 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS11970 d0a863af2c08e2bba635085fb5147e18 156 Gene3D G3DSA:3.40.30.10 1 154 2.1E-42 T 29-03-2018 AM460_RS11970 d0a863af2c08e2bba635085fb5147e18 156 PIRSF PIRSF000239 1 153 1.5E-17 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM460_RS11970 d0a863af2c08e2bba635085fb5147e18 156 Pfam PF00578 AhpC/TSA family 7 134 4.5E-39 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM460_RS04020 1bee56f90874f574835fa785eda3c460 185 SUPERFAMILY SSF53697 6 184 2.09E-34 T 29-03-2018 AM460_RS04020 1bee56f90874f574835fa785eda3c460 185 Pfam PF01380 SIS domain 33 155 1.4E-12 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS04020 1bee56f90874f574835fa785eda3c460 185 Gene3D G3DSA:3.40.50.10490 1 185 4.5E-38 T 29-03-2018 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 Gene3D G3DSA:3.30.70.20 5 197 4.1E-28 T 29-03-2018 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 SUPERFAMILY SSF54862 1 503 3.87E-181 T 29-03-2018 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 Gene3D G3DSA:3.30.70.20 237 363 2.1E-31 T 29-03-2018 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 Gene3D G3DSA:3.30.70.20 364 467 9.2E-30 T 29-03-2018 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 1.2E-29 T 29-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 Gene3D G3DSA:3.30.70.20 198 236 9.4E-20 T 29-03-2018 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 1.7E-296 T 29-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS17550 969276e74315e77a7760fc73f9cb9584 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 4.7E-37 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS09945 758864562368545ceea286db4b14cfbb 229 Gene3D G3DSA:3.40.600.10 4 229 3.5E-59 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM460_RS09945 758864562368545ceea286db4b14cfbb 229 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 229 156.241 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM460_RS09945 758864562368545ceea286db4b14cfbb 229 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 7.7E-34 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM460_RS09945 758864562368545ceea286db4b14cfbb 229 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 10 226 9.6E-116 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM460_RS09945 758864562368545ceea286db4b14cfbb 229 SUPERFAMILY SSF52980 7 228 6.97E-80 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS09945 758864562368545ceea286db4b14cfbb 229 SMART SM00927 59 157 2.4E-64 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 SUPERFAMILY SSF52540 4 235 2.78E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 SUPERFAMILY SSF52540 257 504 3.82E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 SMART SM00382 30 222 1.2E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 SMART SM00382 288 491 0.011 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 Pfam PF00005 ABC transporter 280 437 6.5E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 Pfam PF00005 ABC transporter 21 174 4.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 Gene3D G3DSA:3.40.50.300 262 504 4.8E-39 T 29-03-2018 AM460_RS02405 df3eebd328daa71eae8b4d5678b90887 510 Gene3D G3DSA:3.40.50.300 2 261 2.4E-54 T 29-03-2018 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 1.8E-87 T 29-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.58 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 1.2E-139 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 SUPERFAMILY SSF52518 367 552 7.61E-35 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 Gene3D G3DSA:3.40.50.970 357 556 1.0E-30 T 29-03-2018 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 Gene3D G3DSA:3.40.50.970 1 204 8.4E-56 T 29-03-2018 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 SUPERFAMILY SSF52518 7 175 1.02E-31 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 Gene3D G3DSA:3.40.50.1220 216 356 2.3E-12 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 141 7.1E-27 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 PIRSF PIRSF004983 1 556 5.6E-186 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM460_RS13000 32e11fdc3ede229d2e159f4bc215f0d0 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 535 1.3E-8 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM460_RS22240 6c3affa02db73bfb0c99e4a72e688a02 527 SUPERFAMILY SSF53649 220 487 8.29E-20 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS22240 6c3affa02db73bfb0c99e4a72e688a02 527 Pfam PF00884 Sulfatase 217 483 9.8E-44 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS22240 6c3affa02db73bfb0c99e4a72e688a02 527 Gene3D G3DSA:3.40.720.10 209 487 3.0E-20 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS11910 9ca9084233aa34d17e556e16ff68e206 747 Pfam PF00563 EAL domain 498 730 1.6E-66 T 29-03-2018 IPR001633 EAL domain AM460_RS11910 9ca9084233aa34d17e556e16ff68e206 747 SMART SM00267 319 480 2.5E-18 T 29-03-2018 IPR000160 GGDEF domain AM460_RS11910 9ca9084233aa34d17e556e16ff68e206 747 Gene3D G3DSA:3.20.20.450 494 741 2.1E-74 T 29-03-2018 IPR001633 EAL domain AM460_RS11910 9ca9084233aa34d17e556e16ff68e206 747 Gene3D G3DSA:3.30.70.270 313 465 1.2E-5 T 29-03-2018 AM460_RS11910 9ca9084233aa34d17e556e16ff68e206 747 Pfam PF05231 MASE1 15 320 2.8E-66 T 29-03-2018 IPR007895 MASE1 AM460_RS11910 9ca9084233aa34d17e556e16ff68e206 747 SUPERFAMILY SSF141868 497 738 7.85E-72 T 29-03-2018 IPR001633 EAL domain AM460_RS11910 9ca9084233aa34d17e556e16ff68e206 747 SMART SM00052 492 735 9.3E-108 T 29-03-2018 IPR001633 EAL domain AM460_RS20280 e070b825823ec01d18e7f28e724995fd 188 SUPERFAMILY SSF81342 5 181 2.43E-40 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM460_RS20280 e070b825823ec01d18e7f28e724995fd 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.4E-28 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM460_RS20280 e070b825823ec01d18e7f28e724995fd 188 Gene3D G3DSA:1.20.950.20 1 185 2.8E-35 T 29-03-2018 AM460_RS23920 d83fc21f3be3f417a8210f98cdebeec7 264 Pfam PF01963 TraB family 30 264 5.0E-41 T 29-03-2018 IPR002816 Pheromone shutdown, TraB AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 29.111 T 29-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 Pfam PF01197 Ribosomal protein L31 1 78 1.6E-25 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.8E-18 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 SUPERFAMILY SSF143800 1 80 5.49E-22 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.1E-15 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-15 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS24925 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.1E-15 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS11835 ea1ad55125463722651d11a381159a9c 206 Gene3D G3DSA:1.25.40.10 21 192 2.6E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11835 ea1ad55125463722651d11a381159a9c 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 2.0E-55 T 29-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AM460_RS11835 ea1ad55125463722651d11a381159a9c 206 SUPERFAMILY SSF48452 88 186 8.95E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS11835 ea1ad55125463722651d11a381159a9c 206 PIRSF PIRSF006170 1 206 1.8E-59 T 29-03-2018 IPR026039 Uncharacterised protein family UPF0070 AM460_RS08670 e285b8f667e13c1b5eca1fd2abd2b03a 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM460_RS08670 e285b8f667e13c1b5eca1fd2abd2b03a 82 Gene3D G3DSA:1.10.1200.10 1 81 5.9E-15 T 29-03-2018 AM460_RS08670 e285b8f667e13c1b5eca1fd2abd2b03a 82 Pfam PF00550 Phosphopantetheine attachment site 9 74 5.2E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS08670 e285b8f667e13c1b5eca1fd2abd2b03a 82 SUPERFAMILY SSF47336 3 79 5.1E-16 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS16935 681c6b4ad29902edac090fcde2cc95c7 193 PIRSF PIRSF006102 1 193 3.1E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM460_RS16935 681c6b4ad29902edac090fcde2cc95c7 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.5E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM460_RS16935 681c6b4ad29902edac090fcde2cc95c7 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.541 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM460_RS16935 681c6b4ad29902edac090fcde2cc95c7 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.4E-92 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM460_RS10920 769ae15e7d32e4f9c4bfe2c535bf870f 81 Pfam PF00462 Glutaredoxin 3 57 2.7E-13 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM460_RS10920 769ae15e7d32e4f9c4bfe2c535bf870f 81 SUPERFAMILY SSF52833 1 72 3.66E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS10920 769ae15e7d32e4f9c4bfe2c535bf870f 81 Gene3D G3DSA:3.40.30.10 1 80 3.6E-12 T 29-03-2018 AM460_RS10920 769ae15e7d32e4f9c4bfe2c535bf870f 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 8.0E-34 T 29-03-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 AM460_RS21670 55db875774472b3547c762dd72383ced 278 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 10 277 1.8E-85 T 29-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 AM460_RS26020 d6b87d23a1d192a2690634c446c138b9 363 Gene3D G3DSA:3.40.718.10 1 363 3.2E-131 T 29-03-2018 AM460_RS26020 d6b87d23a1d192a2690634c446c138b9 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 2.8E-139 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM460_RS26020 d6b87d23a1d192a2690634c446c138b9 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 1.0E-172 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM460_RS26020 d6b87d23a1d192a2690634c446c138b9 363 SUPERFAMILY SSF53659 2 360 3.42E-122 T 29-03-2018 AM460_RS26020 d6b87d23a1d192a2690634c446c138b9 363 SMART SM01329 6 355 3.8E-200 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM460_RS26020 d6b87d23a1d192a2690634c446c138b9 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.751 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM460_RS26020 d6b87d23a1d192a2690634c446c138b9 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 Gene3D G3DSA:3.40.50.150 2 173 3.2E-23 T 29-03-2018 AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 SUPERFAMILY SSF53335 32 186 1.32E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 Pfam PF05175 Methyltransferase small domain 50 150 1.2E-6 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 54 68 8.3E-9 T 29-03-2018 AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 30 46 8.3E-9 T 29-03-2018 AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 125 8.3E-9 T 29-03-2018 AM460_RS27185 c4b4b1755803d69d9dd34b7f543d2c7c 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 125 149 8.3E-9 T 29-03-2018 AM460_RS26665 4d1c174f111ab5c9f29dbd1f504bae3e 1014 Gene3D G3DSA:3.40.50.300 502 906 3.6E-7 T 29-03-2018 AM460_RS26665 4d1c174f111ab5c9f29dbd1f504bae3e 1014 SUPERFAMILY SSF52540 652 901 6.37E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS26665 4d1c174f111ab5c9f29dbd1f504bae3e 1014 SUPERFAMILY SSF52540 447 575 6.37E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Pfam PF02954 Bacterial regulatory protein, Fis family 645 684 3.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 SMART SM00382 401 545 8.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 SUPERFAMILY SSF52540 380 618 1.69E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 SUPERFAMILY SSF55781 26 168 6.98E-11 T 29-03-2018 IPR029016 GAF domain-like AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 667 687 7.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 620 7.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Gene3D G3DSA:3.30.450.40 175 384 2.2E-24 T 29-03-2018 IPR029016 GAF domain-like AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Gene3D G3DSA:1.10.8.60 554 626 8.3E-22 T 29-03-2018 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Pfam PF01590 GAF domain 202 344 2.5E-12 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 SUPERFAMILY SSF46689 593 687 1.16E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Gene3D G3DSA:3.30.450.40 10 170 4.9E-13 T 29-03-2018 IPR029016 GAF domain-like AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Gene3D G3DSA:3.40.50.300 385 553 5.9E-30 T 29-03-2018 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 SUPERFAMILY SSF55781 184 360 2.4E-21 T 29-03-2018 IPR029016 GAF domain-like AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 SMART SM00065 202 354 2.1E-25 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 SMART SM00065 26 174 2.7E-13 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Gene3D G3DSA:1.10.10.60 635 688 1.4E-9 T 29-03-2018 AM460_RS10615 597fc9a21541f78846125875cb8b8907 692 Pfam PF00158 Sigma-54 interaction domain 381 548 2.6E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 165 229 2.9E-15 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 Gene3D G3DSA:2.60.40.10 146 238 1.7E-23 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 SUPERFAMILY SSF49584 147 231 1.83E-19 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 PRINTS PR00969 Pili chaperone signature 98 115 3.9E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 PRINTS PR00969 Pili chaperone signature 24 33 3.9E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 PRINTS PR00969 Pili chaperone signature 160 175 3.9E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 PRINTS PR00969 Pili chaperone signature 124 139 3.9E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 PRINTS PR00969 Pili chaperone signature 68 89 3.9E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 142 7.3E-34 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 SUPERFAMILY SSF49354 19 142 2.22E-33 T 29-03-2018 IPR008962 PapD-like AM460_RS25570 5c0e0f616e71e24bd9d3e44867ff9457 238 Gene3D G3DSA:2.60.40.10 23 143 9.6E-29 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS10625 b270a91935b3f9f03bdeb0ac61057caf 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 372 1.6E-180 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM460_RS10625 b270a91935b3f9f03bdeb0ac61057caf 373 PIRSF PIRSF005622 1 372 3.7E-160 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM460_RS10625 b270a91935b3f9f03bdeb0ac61057caf 373 Pfam PF01924 Hydrogenase formation hypA family 15 367 7.5E-152 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM460_RS27950 30ceea080e2124c12ff75f9465265159 44 PRINTS PR00281 Hok/Gef cell toxic protein family signature 4 22 2.2E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27950 30ceea080e2124c12ff75f9465265159 44 PRINTS PR00281 Hok/Gef cell toxic protein family signature 24 44 2.2E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27950 30ceea080e2124c12ff75f9465265159 44 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 9 28 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS27950 30ceea080e2124c12ff75f9465265159 44 Pfam PF01848 Hok/gef family 4 44 6.6E-17 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27950 30ceea080e2124c12ff75f9465265159 44 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 6 44 0.001 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS23910 de0a7a3f6bb413800e313cbf0f79c5a3 113 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 84 3.3E-31 T 29-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 AM460_RS23910 de0a7a3f6bb413800e313cbf0f79c5a3 113 Pfam PF01381 Helix-turn-helix 16 69 4.7E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS23910 de0a7a3f6bb413800e313cbf0f79c5a3 113 SMART SM00530 15 70 2.9E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS23910 de0a7a3f6bb413800e313cbf0f79c5a3 113 Gene3D G3DSA:1.10.260.40 1 113 3.5E-18 T 29-03-2018 AM460_RS23910 de0a7a3f6bb413800e313cbf0f79c5a3 113 SUPERFAMILY SSF47413 11 88 3.25E-23 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.4E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SUPERFAMILY SSF55874 261 424 4.32E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Gene3D G3DSA:1.10.287.130 201 260 4.1E-9 T 29-03-2018 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SUPERFAMILY SSF47384 194 271 6.47E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SMART SM00388 211 271 5.3E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Gene3D G3DSA:3.30.565.10 261 425 1.0E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SMART SM00387 315 425 5.5E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 3.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SMART SM00304 158 210 1.4E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM460_RS17035 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 1.6E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS02920 db46e7298cd337f87cd8ad5633d56d42 409 SUPERFAMILY SSF51735 169 330 7.0E-15 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS02920 db46e7298cd337f87cd8ad5633d56d42 409 Pfam PF00107 Zinc-binding dehydrogenase 187 325 3.2E-10 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS02920 db46e7298cd337f87cd8ad5633d56d42 409 SUPERFAMILY SSF50129 3 189 2.44E-24 T 29-03-2018 IPR011032 GroES-like AM460_RS02920 db46e7298cd337f87cd8ad5633d56d42 409 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 2.6E-5 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS02920 db46e7298cd337f87cd8ad5633d56d42 409 Gene3D G3DSA:3.40.50.720 188 335 7.0E-4 T 29-03-2018 AM460_RS02920 db46e7298cd337f87cd8ad5633d56d42 409 Gene3D G3DSA:3.90.180.10 1 187 1.5E-22 T 29-03-2018 AM460_RS22570 a4d3317147b0efb7a710c7bedd6de193 126 Pfam PF13985 YbgS-like protein 3 126 6.9E-55 T 29-03-2018 IPR020363 Uncharacterised protein family YbgS AM460_RS22570 a4d3317147b0efb7a710c7bedd6de193 126 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 50 126 3.0E-39 T 29-03-2018 IPR020363 Uncharacterised protein family YbgS AM460_RS11200 0a98ff0bc5b6dd337efec3dbe9bc3ea1 247 Pfam PF16461 Lambda phage tail tube protein, TTP 2 154 3.7E-79 T 29-03-2018 IPR032494 Lambda phage tail tube protein AM460_RS11200 0a98ff0bc5b6dd337efec3dbe9bc3ea1 247 SUPERFAMILY SSF49373 157 242 1.02E-5 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM460_RS11200 0a98ff0bc5b6dd337efec3dbe9bc3ea1 247 SMART SM00635 160 240 3.4E-18 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 AM460_RS11200 0a98ff0bc5b6dd337efec3dbe9bc3ea1 247 Gene3D G3DSA:2.60.40.1080 156 246 1.2E-13 T 29-03-2018 AM460_RS11200 0a98ff0bc5b6dd337efec3dbe9bc3ea1 247 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 241 5.0E-11 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 AM460_RS21115 0cdd29ab248cff6dba6f5e50549e04be 181 Pfam PF11985 Protein of unknown function (DUF3486) 1 178 7.2E-54 T 29-03-2018 IPR021874 Bacteriophage Mu, Gp27 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 1.3E-167 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 5.0E-54 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 5.0E-54 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 5.0E-54 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 5.0E-54 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 5.0E-54 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 5.0E-54 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS00070 b60b1603195602a3474267cd6db63b50 476 Pfam PF01235 Sodium:alanine symporter family 52 453 2.0E-142 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 2.9E-7 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 Gene3D G3DSA:3.30.390.10 8 143 5.4E-35 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 SUPERFAMILY SSF51604 138 415 1.61E-84 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 Gene3D G3DSA:3.20.20.120 144 413 6.6E-55 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 Pfam PF13378 Enolase C-terminal domain-like 187 404 6.5E-40 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 SUPERFAMILY SSF54826 7 136 2.47E-31 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS10330 8e1c0de234c87e888de331dbff05e242 446 SMART SM00922 184 284 2.8E-15 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM460_RS04890 a12abdcc59aca2f43e9a3640d1063630 396 Gene3D G3DSA:1.20.1250.20 12 205 1.8E-25 T 29-03-2018 AM460_RS04890 a12abdcc59aca2f43e9a3640d1063630 396 Pfam PF07690 Major Facilitator Superfamily 25 343 5.2E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS04890 a12abdcc59aca2f43e9a3640d1063630 396 Hamap MF_01189 Purine ribonucleoside efflux pump NepI [nepI]. 3 394 41.275 T 29-03-2018 IPR023680 Purine ribonucleoside efflux pump, NepI GO:0015211|GO:0015860|GO:0016021 AM460_RS04890 a12abdcc59aca2f43e9a3640d1063630 396 Gene3D G3DSA:1.20.1250.20 206 396 1.8E-15 T 29-03-2018 AM460_RS04890 a12abdcc59aca2f43e9a3640d1063630 396 SUPERFAMILY SSF103473 14 391 4.71E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS07180 696b401b1fc9547b080033917cb16c27 320 Gene3D G3DSA:3.40.1190.20 1 311 9.1E-59 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS07180 696b401b1fc9547b080033917cb16c27 320 Pfam PF00294 pfkB family carbohydrate kinase 34 296 1.0E-43 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS07180 696b401b1fc9547b080033917cb16c27 320 SUPERFAMILY SSF53613 1 308 3.59E-75 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS11095 370ef5dc2bd7113eacc610badb34dd6b 108 SUPERFAMILY SSF46785 3 69 7.39E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11095 370ef5dc2bd7113eacc610badb34dd6b 108 Pfam PF01726 LexA DNA binding domain 1 65 2.6E-19 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AM460_RS11095 370ef5dc2bd7113eacc610badb34dd6b 108 Gene3D G3DSA:1.10.10.10 1 70 8.0E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25370 a3120a6aa5e4b528e4f2e1ca513e549c 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 4.6E-23 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM460_RS25370 a3120a6aa5e4b528e4f2e1ca513e549c 129 Gene3D G3DSA:3.10.180.10 1 129 5.5E-28 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS25370 a3120a6aa5e4b528e4f2e1ca513e549c 129 SUPERFAMILY SSF54593 3 128 4.83E-32 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 Gene3D G3DSA:3.20.20.80 2 121 4.0E-48 T 29-03-2018 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 SUPERFAMILY SSF51445 5 472 7.88E-155 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 1.3E-128 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 Gene3D G3DSA:2.60.40.1180 475 551 5.5E-16 T 29-03-2018 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 548 6.9E-266 T 29-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 7.2E-7 T 29-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 Gene3D G3DSA:3.20.20.470 171 341 4.7E-37 T 29-03-2018 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 SUPERFAMILY SSF51011 475 549 1.52E-16 T 29-03-2018 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 SMART SM00642 15 414 1.0E-157 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 Gene3D G3DSA:3.20.20.80 342 468 2.3E-22 T 29-03-2018 AM460_RS01505 7dfdf85c9c45348ec7981960c89bf43d 551 Gene3D G3DSA:3.90.400.10 122 170 1.9E-28 T 29-03-2018 AM460_RS07720 506620f5c4521b6be503bb2f21344c25 131 SUPERFAMILY SSF52980 17 125 2.79E-23 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS07720 506620f5c4521b6be503bb2f21344c25 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 10 131 1.1E-60 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM460_RS07720 506620f5c4521b6be503bb2f21344c25 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 114 7.9E-24 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM460_RS07720 506620f5c4521b6be503bb2f21344c25 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.673 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM460_RS07720 506620f5c4521b6be503bb2f21344c25 131 Gene3D G3DSA:3.40.1350.10 22 131 4.4E-35 T 29-03-2018 AM460_RS25875 a1a04eb2fdbbba6305378265f6c37d0e 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 32.961 T 29-03-2018 IPR009777 Cell division protein ZapD AM460_RS25875 a1a04eb2fdbbba6305378265f6c37d0e 247 Gene3D G3DSA:1.10.3900.10 13 174 7.9E-63 T 29-03-2018 AM460_RS25875 a1a04eb2fdbbba6305378265f6c37d0e 247 Pfam PF07072 Cell division protein 19 225 4.3E-78 T 29-03-2018 IPR009777 Cell division protein ZapD AM460_RS25875 a1a04eb2fdbbba6305378265f6c37d0e 247 SUPERFAMILY SSF160950 4 247 4.97E-93 T 29-03-2018 IPR009777 Cell division protein ZapD AM460_RS25875 a1a04eb2fdbbba6305378265f6c37d0e 247 Gene3D G3DSA:2.60.440.10 175 247 1.0E-27 T 29-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF55021 53 132 2.52E-26 T 29-03-2018 AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 Pfam PF08753 NikR C terminal nickel binding domain 54 127 9.9E-28 T 29-03-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF47598 1 45 3.6E-12 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:3.30.70.1150 37 127 1.3E-31 T 29-03-2018 AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 2 130 8.0E-68 T 29-03-2018 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 1.6E-11 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 Hamap MF_00476 Nickel-responsive regulator [nikR]. 1 131 27.936 T 29-03-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 AM460_RS05995 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:1.10.1220.10 2 36 1.9E-14 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS19530 dd4017f9df01188c7c7d3b47069993bd 50 Gene3D G3DSA:3.40.718.10 1 50 7.4E-9 T 29-03-2018 AM460_RS19530 dd4017f9df01188c7c7d3b47069993bd 50 SUPERFAMILY SSF53659 1 50 5.76E-11 T 29-03-2018 AM460_RS19530 dd4017f9df01188c7c7d3b47069993bd 50 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 1 46 4.0E-8 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM460_RS09845 e8ab3924bf6e6f2ad73ee7eecb6e5d59 159 SUPERFAMILY SSF47741 89 155 1.02E-22 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM460_RS09845 e8ab3924bf6e6f2ad73ee7eecb6e5d59 159 Gene3D G3DSA:3.10.20.30 4 79 4.9E-20 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS09845 e8ab3924bf6e6f2ad73ee7eecb6e5d59 159 SUPERFAMILY SSF54292 8 82 4.85E-19 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS09845 e8ab3924bf6e6f2ad73ee7eecb6e5d59 159 Gene3D G3DSA:1.10.150.120 80 159 1.7E-25 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM460_RS09845 e8ab3924bf6e6f2ad73ee7eecb6e5d59 159 Pfam PF01799 [2Fe-2S] binding domain 78 152 2.7E-23 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM460_RS09845 e8ab3924bf6e6f2ad73ee7eecb6e5d59 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 64 4.5E-7 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS01455 35e2b0fabd19991df9115caf965e84f4 131 Pfam PF01042 Endoribonuclease L-PSP 13 127 2.4E-31 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM460_RS01455 35e2b0fabd19991df9115caf965e84f4 131 SUPERFAMILY SSF55298 7 129 1.19E-35 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS01455 35e2b0fabd19991df9115caf965e84f4 131 Gene3D G3DSA:3.30.1330.40 1 131 3.9E-31 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS10660 dd559621c1817a22cf6885c1285fa55a 307 Pfam PF00146 NADH dehydrogenase 9 302 6.1E-49 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10660 dd559621c1817a22cf6885c1285fa55a 307 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 38 53 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10660 dd559621c1817a22cf6885c1285fa55a 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS05415 4f7ef4f0d7fc188abb5ab29c6fbe5bc0 393 Gene3D G3DSA:1.10.3470.10 50 389 1.5E-26 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS05415 4f7ef4f0d7fc188abb5ab29c6fbe5bc0 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 383 6.5E-50 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS19150 71311cfeb7a00fdcae697dfb798805cc 150 SUPERFAMILY SSF102712 50 128 1.27E-6 T 29-03-2018 AM460_RS19150 71311cfeb7a00fdcae697dfb798805cc 150 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 99 104 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM460_RS19150 71311cfeb7a00fdcae697dfb798805cc 150 Gene3D G3DSA:3.40.140.10 26 150 8.4E-47 T 29-03-2018 AM460_RS19150 71311cfeb7a00fdcae697dfb798805cc 150 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 149 6.3E-43 T 29-03-2018 IPR001405 RadC protein AM460_RS19150 71311cfeb7a00fdcae697dfb798805cc 150 Pfam PF04002 RadC-like JAB domain 31 149 1.2E-44 T 29-03-2018 IPR025657 RadC-like JAB domain AM460_RS23900 507c2ece4df05101ddaeadc2c888c250 310 Gene3D G3DSA:3.40.710.10 1 310 3.3E-115 T 29-03-2018 AM460_RS23900 507c2ece4df05101ddaeadc2c888c250 310 Hamap MF_00313 Glutaminase [glsA]. 3 308 44.094 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM460_RS23900 507c2ece4df05101ddaeadc2c888c250 310 Pfam PF04960 Glutaminase 24 308 4.6E-106 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM460_RS23900 507c2ece4df05101ddaeadc2c888c250 310 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 308 8.9E-115 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM460_RS23900 507c2ece4df05101ddaeadc2c888c250 310 SUPERFAMILY SSF56601 3 309 7.15E-114 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS18215 2f7611af1672614622d32d671b386112 57 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 57 25.98 T 29-03-2018 IPR020887 Uncharacterised protein family UPF0509 AM460_RS20770 0a930c3628a0886aa709573f99151b01 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.692 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS20770 0a930c3628a0886aa709573f99151b01 172 SUPERFAMILY SSF54637 3 169 9.94E-56 T 29-03-2018 IPR029069 HotDog domain AM460_RS20770 0a930c3628a0886aa709573f99151b01 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.9E-98 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS20770 0a930c3628a0886aa709573f99151b01 172 Pfam PF07977 FabA-like domain 29 158 3.9E-54 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS20770 0a930c3628a0886aa709573f99151b01 172 Gene3D G3DSA:3.10.129.10 1 172 2.7E-50 T 29-03-2018 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 1.4E-59 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 Gene3D G3DSA:1.20.5.220 119 134 1.9E-4 T 29-03-2018 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 29-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 131 5.8E-46 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 31.107 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 8.9E-15 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 8.9E-15 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 8.9E-15 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM460_RS06970 b2497a96a3f6f531894396f95a073af8 137 SUPERFAMILY SSF81330 12 127 1.7E-36 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 Gene3D G3DSA:2.40.128.130 1004 1309 2.4E-51 T 29-03-2018 AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 SUPERFAMILY SSF51126 377 754 3.45E-28 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 Pfam PF03797 Autotransporter beta-domain 1050 1287 1.2E-37 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 SUPERFAMILY SSF51126 727 1004 1.98E-25 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 Pfam PF02395 Immunoglobulin A1 protease 234 506 7.0E-38 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 SMART SM00869 1047 1298 9.0E-36 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 Gene3D G3DSA:2.160.20.20 600 1001 5.4E-22 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 SUPERFAMILY SSF103515 1028 1309 7.19E-48 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS02145 9b9f685f1a57d7dec920bfc664335a34 1309 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 899 1309 8.2E-75 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS24345 979f59e5905734e5b2af77ddcb7f4e07 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.693 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM460_RS24345 979f59e5905734e5b2af77ddcb7f4e07 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 2.1E-171 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM460_RS24345 979f59e5905734e5b2af77ddcb7f4e07 356 SUPERFAMILY SSF111337 1 343 5.75E-139 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM460_RS24345 979f59e5905734e5b2af77ddcb7f4e07 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 1.9E-132 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM460_RS24345 979f59e5905734e5b2af77ddcb7f4e07 356 Gene3D G3DSA:3.40.1780.10 1 137 4.8E-31 T 29-03-2018 AM460_RS24345 979f59e5905734e5b2af77ddcb7f4e07 356 Gene3D G3DSA:3.40.1780.10 175 344 5.4E-66 T 29-03-2018 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SUPERFAMILY SSF51445 609 880 7.43E-26 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 Pfam PF02839 Carbohydrate binding domain 479 511 7.4E-7 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 Gene3D G3DSA:3.20.20.80 587 888 2.1E-26 T 29-03-2018 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SUPERFAMILY SSF51055 459 516 3.66E-10 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 Gene3D G3DSA:2.10.10.20 415 458 0.019 T 29-03-2018 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 Gene3D G3DSA:2.10.10.20 525 570 0.041 T 29-03-2018 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SMART SM00495 528 570 31.0 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SMART SM00495 128 176 1.3E-6 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SMART SM00495 340 388 1.5E-7 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SMART SM00495 415 459 2.1E-6 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SMART SM00495 25 73 1.7E-8 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SMART SM00495 462 514 5.7E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 SMART SM00495 229 277 6.2E-7 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 Gene3D G3DSA:2.10.10.20 459 518 1.3E-11 T 29-03-2018 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 Gene3D G3DSA:2.10.10.20 325 390 0.033 T 29-03-2018 AM460_RS06730 7723e3cb888257d6bb2af7a90f77a167 900 Gene3D G3DSA:2.10.10.20 20 75 0.025 T 29-03-2018 AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 SUPERFAMILY SSF52540 1089 1147 8.85E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 SUPERFAMILY SSF52540 1333 1458 8.85E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 SUPERFAMILY SSF52540 1223 1255 8.85E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 Pfam PF07057 DNA helicase TraI 1434 1552 7.6E-56 T 29-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1466 0.0 T 29-03-2018 IPR014129 Conjugative transfer relaxase protein TraI AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 Gene3D G3DSA:3.40.50.300 1142 1472 4.8E-5 T 29-03-2018 AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 SUPERFAMILY SSF55464 1 304 1.97E-105 T 29-03-2018 AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 SUPERFAMILY SSF52540 937 1111 4.93E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 Pfam PF08751 TrwC relaxase 10 283 4.3E-75 T 29-03-2018 IPR014862 TrwC relaxase AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 Pfam PF13604 AAA domain 968 1156 1.9E-34 T 29-03-2018 AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 1.8E-116 T 29-03-2018 IPR014059 Conjugative relaxase, N-terminal AM460_RS27415 3b12cd5ed2f3c1c766a2b84a764f1fe3 1756 Gene3D G3DSA:3.40.50.300 903 1141 5.1E-16 T 29-03-2018 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 Gene3D G3DSA:3.40.1390.20 232 367 1.3E-27 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 Gene3D G3DSA:3.40.50.300 1 231 9.5E-28 T 29-03-2018 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 407 707 5.1E-139 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 392 707 3.5E-129 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 PIRSF PIRSF006107 1 714 0.0 T 29-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 SUPERFAMILY SSF53659 393 711 1.44E-94 T 29-03-2018 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 Pfam PF13500 AAA domain 5 230 2.0E-47 T 29-03-2018 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 Gene3D G3DSA:3.40.50.10750 530 683 1.1E-64 T 29-03-2018 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 Pfam PF07085 DRTGG domain 234 345 1.3E-29 T 29-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 SUPERFAMILY SSF52540 4 241 1.59E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS12850 c2b0ce4eb3a42e05471340542ba944d9 714 SUPERFAMILY SSF75138 230 354 2.75E-25 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM460_RS12265 ff1af3fab214864f49ba24ddb220d7ae 332 SMART SM00771 195 324 5.6E-75 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM460_RS12265 ff1af3fab214864f49ba24ddb220d7ae 332 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 197 332 6.0E-76 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM460_RS12265 ff1af3fab214864f49ba24ddb220d7ae 332 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 198 321 3.1E-47 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM460_RS12265 ff1af3fab214864f49ba24ddb220d7ae 332 SUPERFAMILY SSF64383 196 329 3.92E-48 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM460_RS12265 ff1af3fab214864f49ba24ddb220d7ae 332 Gene3D G3DSA:3.30.1400.10 196 327 2.4E-53 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM460_RS12265 ff1af3fab214864f49ba24ddb220d7ae 332 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 326 24.648 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AM460_RS12265 ff1af3fab214864f49ba24ddb220d7ae 332 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 324 2.7E-125 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 738 0.0 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 SUPERFAMILY SSF55821 175 379 5.8E-45 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 SUPERFAMILY SSF54975 8 91 1.09E-20 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 Pfam PF01300 Telomere recombination 210 373 3.3E-46 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 Gene3D G3DSA:3.30.420.40 566 717 1.0E-27 T 29-03-2018 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 Gene3D G3DSA:3.30.70.100 2 97 1.1E-21 T 29-03-2018 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 PIRSF PIRSF006256 4 748 1.5E-278 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 Pfam PF00708 Acylphosphatase 9 90 4.0E-17 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 Pfam PF07503 HypF finger 158 191 1.6E-15 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 Pfam PF07503 HypF finger 108 141 5.9E-16 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS10710 b0c3ddac7a15e85dd08d762516f714aa 750 Gene3D G3DSA:3.90.870.10 188 382 5.0E-49 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS21780 646246601926c4040146bbc44e048d25 935 Gene3D G3DSA:1.20.1480.30 623 687 0.15 T 29-03-2018 AM460_RS21780 646246601926c4040146bbc44e048d25 935 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 190 537 6.2E-87 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS21780 646246601926c4040146bbc44e048d25 935 Gene3D G3DSA:1.20.1270.60 9 117 0.037 T 29-03-2018 AM460_RS21780 646246601926c4040146bbc44e048d25 935 Gene3D G3DSA:1.10.287.1060 292 407 0.0044 T 29-03-2018 AM460_RS21780 646246601926c4040146bbc44e048d25 935 Pfam PF10145 Phage-related minor tail protein 229 427 1.6E-49 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS21130 490876c5274c133d33de59290852fce8 273 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 114 192 5.9E-15 T 29-03-2018 IPR006528 Phage head morphogenesis domain AM460_RS21130 490876c5274c133d33de59290852fce8 273 Pfam PF04233 Phage Mu protein F like protein 59 190 5.3E-29 T 29-03-2018 IPR006528 Phage head morphogenesis domain AM460_RS06480 910302d68e9b641e36d6fda5e6337c3c 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 7.9E-122 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM460_RS06480 910302d68e9b641e36d6fda5e6337c3c 362 PIRSF PIRSF001455 10 360 4.5E-105 T 29-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM460_RS06480 910302d68e9b641e36d6fda5e6337c3c 362 Pfam PF01761 3-dehydroquinate synthase 67 325 1.7E-108 T 29-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM460_RS06480 910302d68e9b641e36d6fda5e6337c3c 362 SUPERFAMILY SSF56796 4 356 7.46E-117 T 29-03-2018 AM460_RS06480 910302d68e9b641e36d6fda5e6337c3c 362 Gene3D G3DSA:3.40.50.1970 6 172 2.3E-50 T 29-03-2018 AM460_RS06480 910302d68e9b641e36d6fda5e6337c3c 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.247 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM460_RS06480 910302d68e9b641e36d6fda5e6337c3c 362 Gene3D G3DSA:1.20.1090.10 173 362 3.4E-68 T 29-03-2018 AM460_RS01165 1db6169a836afa2000754b7e24465c9f 332 Pfam PF01032 FecCD transport family 18 330 1.0E-85 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS01165 1db6169a836afa2000754b7e24465c9f 332 Gene3D G3DSA:1.10.3470.10 3 332 1.9E-58 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS01165 1db6169a836afa2000754b7e24465c9f 332 SUPERFAMILY SSF81345 10 331 3.66E-75 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 SUPERFAMILY SSF81338 2 228 5.23E-67 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.782 T 29-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 1.2E-63 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 Pfam PF00230 Major intrinsic protein 2 223 2.3E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 6.5E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 6.5E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 6.5E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 6.5E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 6.5E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 6.5E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM460_RS21920 e4f3784844e6b8dc229acd0e659e38a3 231 Gene3D G3DSA:1.20.1080.10 1 231 3.4E-69 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM460_RS09770 144fdce0cb0e9fc370dbaa45ad053dd7 439 Gene3D G3DSA:3.20.20.140 87 378 1.5E-71 T 29-03-2018 AM460_RS09770 144fdce0cb0e9fc370dbaa45ad053dd7 439 Gene3D G3DSA:2.30.40.10 10 86 9.2E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS09770 144fdce0cb0e9fc370dbaa45ad053dd7 439 Pfam PF01979 Amidohydrolase family 74 435 2.1E-84 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS09770 144fdce0cb0e9fc370dbaa45ad053dd7 439 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 432 1.3E-191 T 29-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AM460_RS09770 144fdce0cb0e9fc370dbaa45ad053dd7 439 SUPERFAMILY SSF51338 33 91 5.18E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS09770 144fdce0cb0e9fc370dbaa45ad053dd7 439 SUPERFAMILY SSF51556 76 379 5.11E-105 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS00250 059166cd5662aca48a73374765d18436 192 Pfam PF09684 Phage tail protein (Tail_P2_I) 16 162 3.9E-31 T 29-03-2018 IPR006521 Tail protein I AM460_RS00250 059166cd5662aca48a73374765d18436 192 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 18 100 8.7E-11 T 29-03-2018 IPR006521 Tail protein I AM460_RS21230 059166cd5662aca48a73374765d18436 192 Pfam PF09684 Phage tail protein (Tail_P2_I) 16 162 3.9E-31 T 29-03-2018 IPR006521 Tail protein I AM460_RS21230 059166cd5662aca48a73374765d18436 192 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 18 100 8.7E-11 T 29-03-2018 IPR006521 Tail protein I AM460_RS15605 328230db2c6171f695f6fb00ab253447 366 Gene3D G3DSA:1.10.468.10 25 193 1.2E-25 T 29-03-2018 AM460_RS15605 328230db2c6171f695f6fb00ab253447 366 SUPERFAMILY SSF48695 18 179 2.05E-47 T 29-03-2018 IPR011031 Multihaem cytochrome AM460_RS15605 328230db2c6171f695f6fb00ab253447 366 Gene3D G3DSA:1.10.1130.10 234 348 0.013 T 29-03-2018 AM460_RS15605 328230db2c6171f695f6fb00ab253447 366 PIRSF PIRSF000014 1 366 3.1E-155 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AM460_RS15605 328230db2c6171f695f6fb00ab253447 366 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 6 174 5.0E-67 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AM460_RS15950 3ecc229e111a2dda5f13f13566d72467 59 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 2.0E-20 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 AM460_RS15950 3ecc229e111a2dda5f13f13566d72467 59 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.3E-28 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 AM460_RS15950 3ecc229e111a2dda5f13f13566d72467 59 Gene3D G3DSA:1.10.10.60 7 56 8.6E-4 T 29-03-2018 AM460_RS15950 3ecc229e111a2dda5f13f13566d72467 59 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.866 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 AM460_RS11740 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.9E-66 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM460_RS11740 de6f99239b4941ac1360cd737b466eb9 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM460_RS11740 de6f99239b4941ac1360cd737b466eb9 162 Gene3D G3DSA:1.10.10.10 1 139 3.0E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11740 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.4E-47 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM460_RS11740 de6f99239b4941ac1360cd737b466eb9 162 SUPERFAMILY SSF46785 2 133 6.18E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11740 de6f99239b4941ac1360cd737b466eb9 162 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 162 45.923 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM460_RS11740 de6f99239b4941ac1360cd737b466eb9 162 Pfam PF02082 Transcriptional regulator 1 83 2.9E-27 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 Gene3D G3DSA:3.30.70.20 257 281 1.2E-7 T 29-03-2018 AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 278 289 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 Gene3D G3DSA:3.30.70.20 282 316 0.013 T 29-03-2018 AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 Pfam PF12801 4Fe-4S binding domain 97 142 1.4E-14 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 Pfam PF12801 4Fe-4S binding domain 201 246 1.1E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 SUPERFAMILY SSF54862 110 129 1.38E-22 T 29-03-2018 AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 SUPERFAMILY SSF54862 172 291 1.38E-22 T 29-03-2018 AM460_RS20600 5ea99be832834ee9debcf778b933f81c 357 Gene3D G3DSA:3.30.70.20 221 256 3.4E-10 T 29-03-2018 AM460_RS01525 d29caf3d891e07fc006be50965ca02db 450 SUPERFAMILY SSF111283 17 449 1.44E-133 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM460_RS01525 d29caf3d891e07fc006be50965ca02db 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 6.3E-61 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM460_RS01525 d29caf3d891e07fc006be50965ca02db 450 Gene3D G3DSA:3.30.2290.10 10 236 5.6E-61 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM460_RS05520 314dd3192968035d27aeca329477bec7 232 SUPERFAMILY SSF103515 87 232 1.83E-11 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS05520 314dd3192968035d27aeca329477bec7 232 Gene3D G3DSA:2.40.128.130 16 232 6.6E-11 T 29-03-2018 AM460_RS05520 314dd3192968035d27aeca329477bec7 232 Pfam PF03797 Autotransporter beta-domain 88 209 1.2E-11 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS05520 314dd3192968035d27aeca329477bec7 232 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 88 232 2.4E-5 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS05520 314dd3192968035d27aeca329477bec7 232 PIRSF PIRSF030748 1 232 6.0E-151 T 29-03-2018 IPR016955 Autotransporter, YhjY, predicted AM460_RS01160 f8ba59e0d17779fa1a41b1a8018180ff 300 Gene3D G3DSA:3.40.50.1980 17 139 5.0E-27 T 29-03-2018 AM460_RS01160 f8ba59e0d17779fa1a41b1a8018180ff 300 SUPERFAMILY SSF53807 35 292 7.85E-57 T 29-03-2018 AM460_RS01160 f8ba59e0d17779fa1a41b1a8018180ff 300 Pfam PF01497 Periplasmic binding protein 40 269 1.1E-29 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS01160 f8ba59e0d17779fa1a41b1a8018180ff 300 Gene3D G3DSA:3.40.50.1980 140 298 1.2E-30 T 29-03-2018 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.4E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 Gene3D G3DSA:1.10.260.40 2 54 9.4E-20 T 29-03-2018 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 Gene3D G3DSA:3.40.50.2300 55 176 6.1E-31 T 29-03-2018 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 Gene3D G3DSA:3.40.50.2300 177 308 2.6E-48 T 29-03-2018 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 SUPERFAMILY SSF53822 60 340 1.63E-94 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 SMART SM00354 1 71 3.0E-37 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 8.2E-41 T 29-03-2018 AM460_RS16760 5410ca8465ece169f49b2fd3f311aab4 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 58.92 T 29-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 AM460_RS07255 8d68fe6fb1686b10a267154c9a6e2a14 481 Gene3D G3DSA:3.30.2290.10 17 240 1.6E-56 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM460_RS07255 8d68fe6fb1686b10a267154c9a6e2a14 481 SUPERFAMILY SSF111283 22 480 2.49E-132 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM460_RS07255 8d68fe6fb1686b10a267154c9a6e2a14 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.1E-67 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM460_RS07255 8d68fe6fb1686b10a267154c9a6e2a14 481 PIRSF PIRSF004919 14 481 3.7E-158 T 29-03-2018 IPR025502 TldD AM460_RS04705 173eedbbfd7d0508a102b28323e83932 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 98.277 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM460_RS04705 173eedbbfd7d0508a102b28323e83932 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM460_RS04705 173eedbbfd7d0508a102b28323e83932 357 Gene3D G3DSA:3.40.50.300 1 357 2.4E-32 T 29-03-2018 AM460_RS04705 173eedbbfd7d0508a102b28323e83932 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM460_RS04705 173eedbbfd7d0508a102b28323e83932 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 7.4E-141 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM460_RS04705 173eedbbfd7d0508a102b28323e83932 357 SUPERFAMILY SSF52540 1 342 4.02E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04705 173eedbbfd7d0508a102b28323e83932 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.8E-41 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 SUPERFAMILY SSF46689 258 306 9.41E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 31 312 52.388 T 29-03-2018 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 Gene3D G3DSA:1.10.10.60 256 311 1.5E-13 T 29-03-2018 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 Pfam PF02311 AraC-like ligand binding domain 52 175 2.1E-22 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 Pfam PF12833 Helix-turn-helix domain 229 305 1.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 SUPERFAMILY SSF51182 37 151 1.42E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 Gene3D G3DSA:2.60.120.280 33 196 5.5E-20 T 29-03-2018 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 SMART SM00342 222 305 6.9E-32 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 SUPERFAMILY SSF46689 207 257 9.86E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 289 4.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 305 4.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 259 301 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS03545 e4d3e8ad38b012ab626f91f1e62fd6e0 312 Gene3D G3DSA:1.10.10.60 202 255 1.2E-8 T 29-03-2018 AM460_RS14255 90b1782e83f2969f9419569c07cc0a08 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 39.156 T 29-03-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 AM460_RS14255 90b1782e83f2969f9419569c07cc0a08 157 SMART SM00871 1 153 3.5E-33 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AM460_RS14255 90b1782e83f2969f9419569c07cc0a08 157 SUPERFAMILY SSF55136 1 155 3.79E-44 T 29-03-2018 AM460_RS14255 90b1782e83f2969f9419569c07cc0a08 157 Gene3D G3DSA:3.20.80.10 1 157 6.6E-27 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AM460_RS14255 90b1782e83f2969f9419569c07cc0a08 157 Pfam PF06445 GyrI-like small molecule binding domain 1 152 1.4E-29 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 41.445 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 Gene3D G3DSA:3.40.50.1980 226 371 1.4E-71 T 29-03-2018 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.8E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 1.6E-162 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 Pfam PF00815 Histidinol dehydrogenase 28 427 6.4E-167 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 Gene3D G3DSA:3.40.50.1980 29 225 2.6E-87 T 29-03-2018 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 SUPERFAMILY SSF53720 6 429 6.67E-92 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS14175 d9e9feac4b766b415e52b846635c655d 434 PIRSF PIRSF000099 1 430 2.1E-173 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM460_RS18235 941e81753f871ed8bd5392a53bc4f621 245 SUPERFAMILY SSF51366 14 240 6.93E-78 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS18235 941e81753f871ed8bd5392a53bc4f621 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 6.4E-52 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS18235 941e81753f871ed8bd5392a53bc4f621 245 Gene3D G3DSA:3.20.20.70 11 242 5.6E-69 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS18235 941e81753f871ed8bd5392a53bc4f621 245 SMART SM00934 16 237 5.1E-98 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS18235 941e81753f871ed8bd5392a53bc4f621 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.801 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS18235 941e81753f871ed8bd5392a53bc4f621 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 3.2E-55 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS18235 941e81753f871ed8bd5392a53bc4f621 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 29-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM460_RS15395 722b336676f696f43d5cd346fcbacd79 500 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 222 377 9.3E-13 T 29-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM460_RS15395 722b336676f696f43d5cd346fcbacd79 500 Pfam PF17482 Phage tail sheath C-terminal domain 383 479 4.1E-11 T 29-03-2018 IPR020287 Tail sheath protein, C-terminal domain AM460_RS00995 d38bb4e43aa26a7a8575dcab7e332687 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 5.7E-39 T 29-03-2018 IPR009329 Protein of unknown function DUF987 AM460_RS00995 d38bb4e43aa26a7a8575dcab7e332687 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 6.0E-33 T 29-03-2018 IPR009329 Protein of unknown function DUF987 AM460_RS14305 d38bb4e43aa26a7a8575dcab7e332687 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 5.7E-39 T 29-03-2018 IPR009329 Protein of unknown function DUF987 AM460_RS14305 d38bb4e43aa26a7a8575dcab7e332687 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 6.0E-33 T 29-03-2018 IPR009329 Protein of unknown function DUF987 AM460_RS04240 bfcc94bbad8ec4ae64104590560db9d5 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 1.6E-85 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM460_RS04240 bfcc94bbad8ec4ae64104590560db9d5 376 PIRSF PIRSF000390 1 376 2.4E-121 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM460_RS04240 bfcc94bbad8ec4ae64104590560db9d5 376 SUPERFAMILY SSF53383 2 375 1.29E-101 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS04240 bfcc94bbad8ec4ae64104590560db9d5 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 6.0E-222 T 29-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 AM460_RS04240 bfcc94bbad8ec4ae64104590560db9d5 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 78.164 T 29-03-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 AM460_RS04240 bfcc94bbad8ec4ae64104590560db9d5 376 Gene3D G3DSA:3.40.640.10 1 242 6.1E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS04240 bfcc94bbad8ec4ae64104590560db9d5 376 Gene3D G3DSA:3.90.1150.10 243 376 9.3E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 Gene3D G3DSA:1.10.10.10 121 227 3.1E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 SUPERFAMILY SSF52172 1 118 1.71E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 SMART SM00862 146 221 1.2E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.3E-97 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 Pfam PF00072 Response regulator receiver domain 4 113 5.3E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 SUPERFAMILY SSF46894 126 223 1.76E-29 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 SMART SM00448 1 112 1.8E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 Gene3D G3DSA:3.40.50.2300 1 120 2.9E-32 T 29-03-2018 AM460_RS23620 4dd31fadffaa9a241f38483c086aa107 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.5E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS10530 94d584fd5d2baed9b4302d5b6f71dbe9 349 SUPERFAMILY SSF55120 2 340 1.73E-101 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS10530 94d584fd5d2baed9b4302d5b6f71dbe9 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 29.058 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS10530 94d584fd5d2baed9b4302d5b6f71dbe9 349 Gene3D G3DSA:3.30.2340.10 167 302 3.5E-28 T 29-03-2018 AM460_RS10530 94d584fd5d2baed9b4302d5b6f71dbe9 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 29-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AM460_RS10530 94d584fd5d2baed9b4302d5b6f71dbe9 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 9.7E-19 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS10530 94d584fd5d2baed9b4302d5b6f71dbe9 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 167 2.3E-40 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS10530 94d584fd5d2baed9b4302d5b6f71dbe9 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 1 342 2.5E-106 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 SUPERFAMILY SSF52518 332 525 4.26E-68 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS12060 31695f051d78d663db5709ba0026e680 667 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 2.4E-46 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS12060 31695f051d78d663db5709ba0026e680 667 SUPERFAMILY SSF52922 532 663 3.66E-43 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 Gene3D G3DSA:3.40.50.920 540 666 6.2E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 1.8E-172 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 SMART SM00861 354 524 2.5E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM460_RS12060 31695f051d78d663db5709ba0026e680 667 SUPERFAMILY SSF52518 4 320 5.89E-120 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM460_RS12060 31695f051d78d663db5709ba0026e680 667 Gene3D G3DSA:3.40.50.970 1 363 8.7E-125 T 29-03-2018 AM460_RS12060 31695f051d78d663db5709ba0026e680 667 Pfam PF02780 Transketolase, C-terminal domain 539 654 1.3E-20 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM460_RS12060 31695f051d78d663db5709ba0026e680 667 Gene3D G3DSA:3.40.50.970 364 539 9.1E-41 T 29-03-2018 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 Gene3D G3DSA:1.10.3090.10 198 439 4.8E-45 T 29-03-2018 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 38 465 1.5E-157 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 Gene3D G3DSA:3.30.460.10 35 197 3.2E-53 T 29-03-2018 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 SUPERFAMILY SSF81891 198 436 2.22E-52 T 29-03-2018 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 SUPERFAMILY SSF81301 41 196 2.29E-40 T 29-03-2018 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 467 38.846 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 227 287 3.1E-20 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 Pfam PF01743 Poly A polymerase head domain 69 200 1.1E-39 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM460_RS25610 0dc1a157925defb82cb3b4d035e3b988 472 Pfam PF12626 Polymerase A arginine-rich C-terminus 345 463 2.2E-40 T 29-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AM460_RS18015 01b386065c3f2d61e5463a7369bbc6c7 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.965 T 29-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 AM460_RS18015 01b386065c3f2d61e5463a7369bbc6c7 168 SUPERFAMILY SSF52833 4 164 3.34E-45 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS18015 01b386065c3f2d61e5463a7369bbc6c7 168 Gene3D G3DSA:3.40.30.10 5 168 1.1E-24 T 29-03-2018 AM460_RS18015 01b386065c3f2d61e5463a7369bbc6c7 168 Pfam PF08534 Redoxin 20 163 4.0E-31 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM460_RS18015 01b386065c3f2d61e5463a7369bbc6c7 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 29-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 280 293 1.4E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 97 113 1.4E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 226 240 1.4E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 Gene3D G3DSA:3.90.120.10 313 447 7.6E-25 T 29-03-2018 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 441 459 - T 29-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 98 458 2.5E-112 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 Pfam PF00145 C-5 cytosine-specific DNA methylase 96 457 1.3E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 Gene3D G3DSA:3.40.50.150 88 309 1.8E-57 T 29-03-2018 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 178 190 - T 29-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 AM460_RS11265 db8de1f5e47552e7a80af1b29ae7b175 477 SUPERFAMILY SSF53335 96 460 3.04E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 SUPERFAMILY SSF55811 6 144 7.45E-23 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 Gene3D G3DSA:3.90.79.10 1 150 1.1E-27 T 29-03-2018 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 74 93 1.1E-55 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 129 142 1.1E-55 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 23 44 1.1E-55 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 102 123 1.1E-55 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 6 23 1.1E-55 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM460_RS15645 8bd7894cb4fad78566676c1289400a70 150 Pfam PF00293 NUDIX domain 8 144 1.2E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS12695 3898077b7240c4916126cd119448fd73 274 SUPERFAMILY SSF55166 21 272 4.55E-103 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM460_RS12695 3898077b7240c4916126cd119448fd73 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 71.153 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM460_RS12695 3898077b7240c4916126cd119448fd73 274 PIRSF PIRSF018455 1 274 5.3E-121 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM460_RS12695 3898077b7240c4916126cd119448fd73 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 2.1E-94 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM460_RS12695 3898077b7240c4916126cd119448fd73 274 Gene3D G3DSA:3.30.1380.10 20 274 3.6E-97 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM460_RS13450 ca378b7f66bed154a8d0d51b494fd345 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 4.4E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS13450 ca378b7f66bed154a8d0d51b494fd345 364 SUPERFAMILY SSF161098 131 345 1.7E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS13450 ca378b7f66bed154a8d0d51b494fd345 364 Gene3D G3DSA:1.10.3720.10 2 349 1.6E-36 T 29-03-2018 AM460_RS07370 5346c2bad292d7a109eb5637857156ad 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 4.3E-41 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS07370 5346c2bad292d7a109eb5637857156ad 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.5E-66 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS07370 5346c2bad292d7a109eb5637857156ad 154 Gene3D G3DSA:2.60.120.370 1 153 1.8E-45 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS07370 5346c2bad292d7a109eb5637857156ad 154 SUPERFAMILY SSF51197 1 152 1.07E-43 T 29-03-2018 AM460_RS03480 37cc44e310531f01ba4bb7cee5d65c85 255 Gene3D G3DSA:3.20.20.70 1 255 2.7E-100 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS03480 37cc44e310531f01ba4bb7cee5d65c85 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.5E-108 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS03480 37cc44e310531f01ba4bb7cee5d65c85 255 Pfam PF00121 Triosephosphate isomerase 5 246 2.6E-93 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS03480 37cc44e310531f01ba4bb7cee5d65c85 255 SUPERFAMILY SSF51351 1 248 3.4E-91 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS03480 37cc44e310531f01ba4bb7cee5d65c85 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS03480 37cc44e310531f01ba4bb7cee5d65c85 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.72 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS16075 89bd94dcae3f90533b21b0b27c5e724c 427 Pfam PF04285 Protein of unknown function (DUF444) 4 421 2.0E-186 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 AM460_RS16075 89bd94dcae3f90533b21b0b27c5e724c 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 42.705 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 AM460_RS14965 c8bc6b641823caf4d8ff34124d6579be 110 SUPERFAMILY SSF103481 6 106 2.88E-23 T 29-03-2018 AM460_RS14965 c8bc6b641823caf4d8ff34124d6579be 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.3E-34 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 SUPERFAMILY SSF52540 22 224 3.89E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Gene3D G3DSA:1.20.5.730 509 602 4.2E-5 T 29-03-2018 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Gene3D G3DSA:1.20.5.50 829 953 0.3 T 29-03-2018 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Gene3D G3DSA:1.10.287.620 981 1120 4.6E-9 T 29-03-2018 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Gene3D G3DSA:3.40.1140.10 1 227 4.2E-10 T 29-03-2018 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 PIRSF PIRSF005246 1 1486 0.0 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Gene3D G3DSA:1.20.120.330 343 482 0.18 T 29-03-2018 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 8.1E-15 T 29-03-2018 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.394 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Gene3D G3DSA:3.40.50.300 1153 1436 1.4E-5 T 29-03-2018 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Pfam PF04310 MukB N-terminal 2 227 6.3E-125 T 29-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 Pfam PF16330 MukB hinge domain 645 810 5.6E-74 T 29-03-2018 IPR032520 MukB, hinge domain AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 SUPERFAMILY SSF52540 1253 1433 1.56E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20900 47f164ad15a4dd88dc1ad2a172e754a6 1486 SUPERFAMILY SSF52540 21 55 1.56E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 SUPERFAMILY SSF54506 2 273 5.55E-57 T 29-03-2018 AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 Pfam PF01678 Diaminopimelate epimerase 3 123 2.6E-35 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 Pfam PF01678 Diaminopimelate epimerase 152 267 2.9E-34 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.863 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 7.0E-105 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 Gene3D G3DSA:3.10.310.10 125 261 2.1E-51 T 29-03-2018 AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 Gene3D G3DSA:3.10.310.10 1 124 2.7E-48 T 29-03-2018 AM460_RS04130 5e76299c10cf89e239f8334387534a95 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 29-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM460_RS20885 679f9d441d38637cd2f65af2dc47cc11 182 Gene3D G3DSA:3.30.1380.10 56 182 3.4E-22 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM460_RS20885 679f9d441d38637cd2f65af2dc47cc11 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.2E-61 T 29-03-2018 IPR010275 Protein of unknown function DUF882 AM460_RS20885 679f9d441d38637cd2f65af2dc47cc11 182 SUPERFAMILY SSF55166 68 182 1.33E-31 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM460_RS01905 b46b36171b5faeedfba488b3eded63e4 443 Gene3D G3DSA:3.40.630.40 187 418 2.9E-58 T 29-03-2018 AM460_RS01905 b46b36171b5faeedfba488b3eded63e4 443 SMART SM00646 252 411 5.3E-76 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM460_RS01905 b46b36171b5faeedfba488b3eded63e4 443 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 192 411 7.6E-49 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM460_RS01905 b46b36171b5faeedfba488b3eded63e4 443 SUPERFAMILY SSF53187 338 414 3.01E-53 T 29-03-2018 AM460_RS01905 b46b36171b5faeedfba488b3eded63e4 443 SUPERFAMILY SSF53187 190 286 3.01E-53 T 29-03-2018 AM460_RS20215 20f8c201d2530f439d43320346ee4df3 138 SUPERFAMILY SSF140566 1 111 2.09E-15 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM460_RS20215 20f8c201d2530f439d43320346ee4df3 138 Gene3D G3DSA:1.20.58.300 1 112 2.5E-17 T 29-03-2018 AM460_RS20215 20f8c201d2530f439d43320346ee4df3 138 Pfam PF05130 FlgN protein 1 128 2.6E-18 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM460_RS00150 e65bbf8d2a716c4ef944edf446b94333 175 SUPERFAMILY SSF52972 1 167 2.35E-58 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS00150 e65bbf8d2a716c4ef944edf446b94333 175 Pfam PF01931 Protein of unknown function DUF84 7 165 6.3E-53 T 29-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AM460_RS00150 e65bbf8d2a716c4ef944edf446b94333 175 Gene3D G3DSA:3.90.950.10 1 170 5.0E-60 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS00150 e65bbf8d2a716c4ef944edf446b94333 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 30.285 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase AM460_RS00150 e65bbf8d2a716c4ef944edf446b94333 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 170 2.7E-73 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase AM460_RS15130 c3ea94bc15e8600984749176bba9a874 338 Gene3D G3DSA:1.10.443.10 169 328 9.9E-18 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS15130 c3ea94bc15e8600984749176bba9a874 338 Pfam PF00589 Phage integrase family 165 326 1.3E-7 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS15130 c3ea94bc15e8600984749176bba9a874 338 Gene3D G3DSA:1.10.150.130 57 168 8.9E-21 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS15130 c3ea94bc15e8600984749176bba9a874 338 SUPERFAMILY SSF56349 61 325 3.06E-49 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS09395 77050e11da421eabb42148150ba51165 138 SUPERFAMILY SSF53098 3 136 7.44E-44 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS09395 77050e11da421eabb42148150ba51165 138 SMART SM00732 3 103 1.2E-43 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM460_RS09395 77050e11da421eabb42148150ba51165 138 Gene3D G3DSA:3.30.420.140 1 138 4.7E-44 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM460_RS09395 77050e11da421eabb42148150ba51165 138 Pfam PF03652 Holliday junction resolvase 4 135 5.2E-44 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM460_RS09395 77050e11da421eabb42148150ba51165 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 26.665 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM460_RS09395 77050e11da421eabb42148150ba51165 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 8.7E-63 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM460_RS01025 a9abc9cdec001b9e3c5e3a4e03e8eedc 64 Gene3D G3DSA:3.30.160.130 19 64 6.3E-22 T 29-03-2018 AM460_RS01025 a9abc9cdec001b9e3c5e3a4e03e8eedc 64 SUPERFAMILY SSF54786 24 64 6.67E-15 T 29-03-2018 AM460_RS01025 a9abc9cdec001b9e3c5e3a4e03e8eedc 64 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 21 64 1.0E-16 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS01025 a9abc9cdec001b9e3c5e3a4e03e8eedc 64 Pfam PF06006 Bacterial protein of unknown function (DUF905) 20 64 2.1E-14 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 SUPERFAMILY SSF50156 86 194 1.58E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 Pfam PF02163 Peptidase family M50 11 438 2.1E-89 T 29-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 Gene3D G3DSA:2.30.42.10 126 220 1.6E-12 T 29-03-2018 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 4.4E-184 T 29-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 209 277 8.3E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 SMART SM00228 115 186 0.11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 SMART SM00228 211 280 8.0E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 Gene3D G3DSA:2.30.42.10 222 309 1.6E-21 T 29-03-2018 AM460_RS25425 d976d8d9918e87307e67da061135fb82 450 SUPERFAMILY SSF50156 196 291 1.24E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM460_RS00605 6627c6aea3c9475dae4a7d6fa188c03a 164 Pfam PF10696 Protein of unknown function (DUF2501) 84 162 3.4E-27 T 29-03-2018 IPR019637 Protein of unknown function DUF2501 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 Gene3D G3DSA:3.50.50.60 251 321 2.5E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 SUPERFAMILY SSF51905 2 315 9.07E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 Gene3D G3DSA:3.50.50.60 2 128 1.7E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 Gene3D G3DSA:3.50.50.60 129 242 4.5E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.3E-41 T 29-03-2018 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.3E-41 T 29-03-2018 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.3E-41 T 29-03-2018 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.3E-41 T 29-03-2018 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.3E-41 T 29-03-2018 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 2.7E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.5E-78 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM460_RS21850 64f0bfa97b5ccaa7e117845426cec118 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 1.1E-125 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Gene3D G3DSA:3.90.650.10 426 609 1.6E-29 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Gene3D G3DSA:3.90.650.10 823 994 6.4E-33 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.754 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Gene3D G3DSA:3.30.1330.10 183 220 3.9E-4 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Gene3D G3DSA:3.30.1330.10 221 425 2.3E-50 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Gene3D G3DSA:3.30.1330.10 612 813 7.4E-23 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SUPERFAMILY SSF56042 432 615 6.73E-52 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SUPERFAMILY SSF56042 818 1032 3.89E-58 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SUPERFAMILY SSF52317 1036 1293 9.17E-100 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Gene3D G3DSA:3.40.50.880 1038 1294 2.0E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 831 966 3.8E-14 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 8.5E-26 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 2.1E-104 T 29-03-2018 AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SMART SM01211 1039 1294 5.5E-161 T 29-03-2018 AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SUPERFAMILY SSF55326 618 816 4.19E-67 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SUPERFAMILY SSF82697 1 152 9.42E-54 T 29-03-2018 AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SUPERFAMILY SSF55326 221 428 1.26E-64 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11625 3189f70fc1c8881df65f31c1d1a48562 1295 SUPERFAMILY SSF109736 155 220 7.45E-22 T 29-03-2018 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 1.8E-107 T 29-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 SUPERFAMILY SSF48019 212 335 1.36E-36 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 8.1E-48 T 29-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 Gene3D G3DSA:1.10.8.60 143 222 5.7E-23 T 29-03-2018 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 Gene3D G3DSA:1.20.272.10 223 343 1.7E-28 T 29-03-2018 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 1.8E-73 T 29-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 Gene3D G3DSA:3.40.50.300 1 140 6.0E-18 T 29-03-2018 AM460_RS23175 6f36ee2fc3096b2890f70a76f45b35e3 343 SUPERFAMILY SSF52540 1 210 2.24E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14295 8a3ce5c64f06078da83eea6699120d3f 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 3.9E-51 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 AM460_RS14295 8a3ce5c64f06078da83eea6699120d3f 122 SUPERFAMILY SSF143737 6 118 1.2E-54 T 29-03-2018 AM460_RS14295 8a3ce5c64f06078da83eea6699120d3f 122 Gene3D G3DSA:3.30.450.20 27 119 2.4E-52 T 29-03-2018 AM460_RS22910 fb07a807ccef34b9e16c490a691929e5 254 Pfam PF12697 Alpha/beta hydrolase family 19 246 6.8E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS22910 fb07a807ccef34b9e16c490a691929e5 254 SUPERFAMILY SSF53474 12 253 4.05E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS22910 fb07a807ccef34b9e16c490a691929e5 254 Gene3D G3DSA:3.40.50.1820 1 254 1.7E-55 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.215 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 4.7E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 4.7E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 4.7E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 4.7E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 4.7E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 Gene3D G3DSA:3.90.226.10 11 287 2.2E-73 T 29-03-2018 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 1.7E-152 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 SUPERFAMILY SSF52096 23 284 7.96E-92 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS12760 00f16035247d9646639b739f14fd7dc5 304 Pfam PF01039 Carboxyl transferase domain 54 265 3.4E-19 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM460_RS03765 d6d01f403ba2cc3896163106ecc766cc 169 Pfam PF04220 Der GTPase activator (YihI) 14 166 2.1E-54 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 AM460_RS03765 d6d01f403ba2cc3896163106ecc766cc 169 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 169 16.842 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 1.5E-192 T 29-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 Pfam PF00005 ABC transporter 45 192 2.2E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 Gene3D G3DSA:3.10.580.10 291 399 5.8E-11 T 29-03-2018 AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 Gene3D G3DSA:3.40.50.300 2 277 2.5E-76 T 29-03-2018 AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 SUPERFAMILY SSF54631 276 394 9.51E-12 T 29-03-2018 AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 Pfam PF00571 CBS domain 347 393 1.3E-5 T 29-03-2018 IPR000644 CBS domain AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 SUPERFAMILY SSF52540 43 270 3.39E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10895 90190f411a2229fbbff6ee0b34aa441f 400 SMART SM00382 53 242 9.6E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS04950 13e9ea7ed53538699b49cd847a75d7dc 363 Pfam PF02378 Phosphotransferase system, EIIC 19 214 4.5E-10 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS04950 13e9ea7ed53538699b49cd847a75d7dc 363 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 7 335 2.4E-93 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM460_RS25515 ef641f630db987af456f7d54f7bbfb7a 266 Pfam PF01497 Periplasmic binding protein 26 217 3.8E-24 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS25515 ef641f630db987af456f7d54f7bbfb7a 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 48.581 T 29-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AM460_RS25515 ef641f630db987af456f7d54f7bbfb7a 266 Gene3D G3DSA:3.40.50.1980 22 140 1.3E-29 T 29-03-2018 AM460_RS25515 ef641f630db987af456f7d54f7bbfb7a 266 SUPERFAMILY SSF53807 25 262 2.75E-58 T 29-03-2018 AM460_RS25515 ef641f630db987af456f7d54f7bbfb7a 266 Gene3D G3DSA:3.40.50.1980 141 266 7.8E-24 T 29-03-2018 AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 Gene3D G3DSA:3.40.190.10 89 178 3.2E-20 T 29-03-2018 AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 Pfam PF03466 LysR substrate binding domain 89 292 9.4E-46 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 Gene3D G3DSA:1.10.10.10 1 85 1.4E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 Gene3D G3DSA:3.40.190.10 179 268 1.3E-18 T 29-03-2018 AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 SUPERFAMILY SSF46785 3 113 1.39E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12285 f0648d0531ada3da457da12529d932c4 308 SUPERFAMILY SSF53850 89 296 4.5E-43 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.494 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF56784 293 317 6.12E-39 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF56784 377 404 6.12E-39 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF56784 435 559 6.12E-39 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 Gene3D G3DSA:2.70.150.10 13 208 5.6E-23 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 2.8E-38 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 337 1.1E-37 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 2.4E-49 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF81665 29 103 2.35E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF81665 619 662 2.35E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF81665 208 299 2.35E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF81653 120 207 1.31E-20 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 Gene3D G3DSA:3.40.50.1000 444 577 3.5E-34 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 SUPERFAMILY SSF81660 316 450 1.47E-38 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 Pfam PF00122 E1-E2 ATPase 119 282 1.4E-33 T 29-03-2018 AM460_RS22865 955f1b5c2db7a7b74165e3bc194d1ff6 682 Gene3D G3DSA:3.40.1110.10 316 443 2.3E-26 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM460_RS26810 c3f23215e7664232480ebe6207f8490b 682 SUPERFAMILY SSF110849 67 164 5.58E-13 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS26810 c3f23215e7664232480ebe6207f8490b 682 SMART SM00470 66 162 2.8E-22 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS26810 c3f23215e7664232480ebe6207f8490b 682 SUPERFAMILY SSF109709 156 259 1.96E-20 T 29-03-2018 AM460_RS26810 c3f23215e7664232480ebe6207f8490b 682 Gene3D G3DSA:3.90.1530.10 57 162 2.6E-18 T 29-03-2018 AM460_RS26810 c3f23215e7664232480ebe6207f8490b 682 Gene3D G3DSA:1.10.10.730 163 209 3.4E-8 T 29-03-2018 AM460_RS26810 c3f23215e7664232480ebe6207f8490b 682 Pfam PF02195 ParB-like nuclease domain 67 161 5.8E-14 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS11115 646d4aba41496c6fe3a9ad0f14342104 250 SUPERFAMILY SSF57938 146 195 1.23E-7 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM460_RS11115 646d4aba41496c6fe3a9ad0f14342104 250 Gene3D G3DSA:2.10.230.10 101 163 2.1E-10 T 29-03-2018 AM460_RS11115 646d4aba41496c6fe3a9ad0f14342104 250 Gene3D G3DSA:1.20.1580.10 164 219 0.01 T 29-03-2018 AM460_RS11115 646d4aba41496c6fe3a9ad0f14342104 250 Pfam PF03589 Antitermination protein 155 242 7.6E-24 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM460_RS11115 646d4aba41496c6fe3a9ad0f14342104 250 Pfam PF03589 Antitermination protein 23 107 3.4E-24 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM460_RS02975 903663bab1bd6e303432387409794b59 147 Pfam PF13673 Acetyltransferase (GNAT) domain 38 131 1.2E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS02975 903663bab1bd6e303432387409794b59 147 SUPERFAMILY SSF55729 3 139 1.17E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS02975 903663bab1bd6e303432387409794b59 147 Gene3D G3DSA:3.40.630.30 1 146 1.6E-29 T 29-03-2018 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Pfam PF00158 Sigma-54 interaction domain 272 440 2.0E-68 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Gene3D G3DSA:1.10.8.60 446 552 1.3E-21 T 29-03-2018 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Pfam PF13188 PAS domain 162 206 1.9E-6 T 29-03-2018 IPR000014 PAS domain AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Pfam PF02954 Bacterial regulatory protein, Fis family 548 587 3.6E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 SMART SM00091 160 225 6.1E-5 T 29-03-2018 IPR000014 PAS domain AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 SUPERFAMILY SSF55785 161 207 1.92E-8 T 29-03-2018 IPR000014 PAS domain AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 359 374 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Gene3D G3DSA:3.30.450.40 3 154 1.4E-4 T 29-03-2018 IPR029016 GAF domain-like AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 SUPERFAMILY SSF46689 545 589 1.21E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 SMART SM00382 292 436 1.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Gene3D G3DSA:3.40.50.300 275 445 1.6E-26 T 29-03-2018 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 SUPERFAMILY SSF52540 272 511 4.93E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Gene3D G3DSA:1.10.10.60 553 589 8.2E-15 T 29-03-2018 AM460_RS09840 1861eebe76a335a7d8d1baad38d34272 592 Gene3D G3DSA:3.30.450.20 159 274 3.9E-8 T 29-03-2018 AM460_RS09360 a479cbafa67b46cc1d6314e2a6c5f852 328 Gene3D G3DSA:3.40.190.10 145 226 2.9E-5 T 29-03-2018 AM460_RS09360 a479cbafa67b46cc1d6314e2a6c5f852 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 3.2E-83 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM460_RS09360 a479cbafa67b46cc1d6314e2a6c5f852 328 PIRSF PIRSF006470 1 328 9.1E-87 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM460_RS09360 a479cbafa67b46cc1d6314e2a6c5f852 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 284 2.1E-84 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM460_RS24540 b58610ee0c1f52981825239daeaa2024 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS24540 b58610ee0c1f52981825239daeaa2024 255 Pfam PF00005 ABC transporter 17 156 3.6E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS24540 b58610ee0c1f52981825239daeaa2024 255 SUPERFAMILY SSF52540 1 212 1.77E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24540 b58610ee0c1f52981825239daeaa2024 255 Gene3D G3DSA:3.40.50.300 1 220 1.7E-60 T 29-03-2018 AM460_RS24540 b58610ee0c1f52981825239daeaa2024 255 SMART SM00382 26 205 3.6E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS12085 250a02f08e6d9ba911b8dc072d4bf5d1 233 Pfam PF06249 Ethanolamine utilisation protein EutQ 85 232 7.0E-69 T 29-03-2018 IPR010424 Ethanolamine utilisation EutQ AM460_RS12085 250a02f08e6d9ba911b8dc072d4bf5d1 233 Gene3D G3DSA:2.60.120.10 90 233 1.3E-32 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS12085 250a02f08e6d9ba911b8dc072d4bf5d1 233 SUPERFAMILY SSF51182 109 230 8.3E-29 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS00585 97a11c6d3d5fcf9f2d7cb79fe023ce71 256 Pfam PF06738 Putative threonine/serine exporter 11 250 6.6E-70 T 29-03-2018 IPR010619 Putative threonine/serine exporter AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 437 1.4E-70 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Gene3D G3DSA:3.40.50.300 444 604 4.0E-20 T 29-03-2018 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Gene3D G3DSA:3.40.50.300 605 888 3.8E-29 T 29-03-2018 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Pfam PF13361 UvrD-like helicase C-terminal domain 442 808 1.7E-16 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Gene3D G3DSA:1.10.3170.10 155 349 3.0E-62 T 29-03-2018 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 SUPERFAMILY SSF52540 325 825 2.16E-108 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 SUPERFAMILY SSF52540 14 80 2.16E-108 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 SUPERFAMILY SSF52540 118 202 2.16E-108 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Pfam PF12705 PD-(D/E)XK nuclease superfamily 951 1151 3.8E-5 T 29-03-2018 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1173 23.177 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 Gene3D G3DSA:3.90.320.10 889 1180 3.0E-84 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM460_RS10000 5eaecc97a34cd1f8e2254607764551a7 1180 SUPERFAMILY SSF52980 899 1174 1.5E-93 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS00065 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS00065 13f3c35a9df55b8e0032f2564af2a00c 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.598 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS00065 13f3c35a9df55b8e0032f2564af2a00c 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.5E-167 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS00065 13f3c35a9df55b8e0032f2564af2a00c 317 SUPERFAMILY SSF51569 1 316 5.05E-118 T 29-03-2018 AM460_RS00065 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS00065 13f3c35a9df55b8e0032f2564af2a00c 317 Gene3D G3DSA:3.20.20.70 2 316 1.2E-123 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS00065 13f3c35a9df55b8e0032f2564af2a00c 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 6.5E-103 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM460_RS21335 c959585f6260088ae6486013d5b0e215 172 Pfam PF04985 Phage tail tube protein FII 4 171 6.7E-63 T 29-03-2018 IPR006498 Tail tube protein AM460_RS21335 c959585f6260088ae6486013d5b0e215 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 172 3.5E-50 T 29-03-2018 IPR006498 Tail tube protein AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 Gene3D G3DSA:3.40.630.10 268 374 2.0E-9 T 29-03-2018 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 Pfam PF07687 Peptidase dimerisation domain 175 282 6.2E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 7.2E-173 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 1.8E-43 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 Gene3D G3DSA:3.40.630.10 1 267 8.6E-63 T 29-03-2018 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.211 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 SUPERFAMILY SSF53187 292 373 2.17E-65 T 29-03-2018 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 SUPERFAMILY SSF53187 5 178 2.17E-65 T 29-03-2018 AM460_RS12015 6c142c42f1a04d98b314b1f437cb98bf 375 SUPERFAMILY SSF55031 179 286 7.63E-30 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS03245 9c884acd7dfaecc39e28e2c4116eac1d 215 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 209 52.601 T 29-03-2018 IPR023764 Transcriptional repressor HTH, FabR AM460_RS03245 9c884acd7dfaecc39e28e2c4116eac1d 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 58 3.2E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS03245 9c884acd7dfaecc39e28e2c4116eac1d 215 Gene3D G3DSA:1.10.10.60 48 82 3.4E-8 T 29-03-2018 AM460_RS03245 9c884acd7dfaecc39e28e2c4116eac1d 215 SUPERFAMILY SSF46689 2 77 8.98E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS03245 9c884acd7dfaecc39e28e2c4116eac1d 215 Gene3D G3DSA:1.10.10.60 2 47 2.0E-15 T 29-03-2018 AM460_RS03245 9c884acd7dfaecc39e28e2c4116eac1d 215 Gene3D G3DSA:1.10.357.10 83 193 1.9E-6 T 29-03-2018 AM460_RS01035 07825adb7ea0aa841513a53bf22db8bc 290 Gene3D G3DSA:3.40.50.300 44 266 1.2E-27 T 29-03-2018 AM460_RS01035 07825adb7ea0aa841513a53bf22db8bc 290 SUPERFAMILY SSF52540 21 222 6.46E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01035 07825adb7ea0aa841513a53bf22db8bc 290 Gene3D G3DSA:3.40.50.300 5 43 3.3E-4 T 29-03-2018 AM460_RS01035 07825adb7ea0aa841513a53bf22db8bc 290 Pfam PF01926 50S ribosome-binding GTPase 39 134 1.9E-13 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS01745 d65578b90f9ff9693fd0afcf7c4d1870 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 3.2E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS01745 d65578b90f9ff9693fd0afcf7c4d1870 91 SUPERFAMILY SSF159871 3 91 3.27E-24 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS01745 d65578b90f9ff9693fd0afcf7c4d1870 91 Gene3D G3DSA:3.30.1660.10 20 91 2.3E-22 T 29-03-2018 IPR025543 Dodecin-like AM460_RS22300 3573fc3b45dec02370eb08bf31ab4f04 225 SUPERFAMILY SSF51197 4 177 4.23E-9 T 29-03-2018 AM460_RS22300 3573fc3b45dec02370eb08bf31ab4f04 225 SMART SM00702 1 176 2.3E-34 T 29-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AM460_RS22300 3573fc3b45dec02370eb08bf31ab4f04 225 Gene3D G3DSA:2.60.120.620 2 186 1.6E-33 T 29-03-2018 AM460_RS22300 3573fc3b45dec02370eb08bf31ab4f04 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 45.699 T 29-03-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AM460_RS22300 3573fc3b45dec02370eb08bf31ab4f04 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 8.0E-15 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM460_RS19920 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF55031 208 320 2.56E-43 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS19920 47816567826a65213ee7283064a92c30 408 Gene3D G3DSA:3.40.630.10 1 408 9.5E-50 T 29-03-2018 AM460_RS19920 47816567826a65213ee7283064a92c30 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 8.7E-158 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM460_RS19920 47816567826a65213ee7283064a92c30 408 PIRSF PIRSF037215 1 408 1.7E-182 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM460_RS19920 47816567826a65213ee7283064a92c30 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 9.6E-17 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM460_RS19920 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF53187 322 406 1.94E-84 T 29-03-2018 AM460_RS19920 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF53187 1 209 1.94E-84 T 29-03-2018 AM460_RS19920 47816567826a65213ee7283064a92c30 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM460_RS19920 47816567826a65213ee7283064a92c30 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM460_RS19920 47816567826a65213ee7283064a92c30 408 Pfam PF07687 Peptidase dimerisation domain 206 303 1.4E-11 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS19920 47816567826a65213ee7283064a92c30 408 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.59 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM460_RS15810 662b062d8532c874e23fbba27365a907 877 Pfam PF02470 MlaD protein 394 455 8.7E-6 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS15810 662b062d8532c874e23fbba27365a907 877 Pfam PF02470 MlaD protein 281 351 1.8E-7 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS15810 662b062d8532c874e23fbba27365a907 877 Pfam PF02470 MlaD protein 46 137 9.7E-17 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS15810 662b062d8532c874e23fbba27365a907 877 Pfam PF02470 MlaD protein 163 220 2.6E-6 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS15810 662b062d8532c874e23fbba27365a907 877 Pfam PF02470 MlaD protein 747 810 3.0E-8 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS15810 662b062d8532c874e23fbba27365a907 877 Pfam PF02470 MlaD protein 636 724 5.7E-10 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS09190 c46a88bf0727508d4d6bc01cdc5f9fe3 86 SUPERFAMILY SSF159871 5 86 2.35E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS09190 c46a88bf0727508d4d6bc01cdc5f9fe3 86 Pfam PF07338 Protein of unknown function (DUF1471) 36 86 7.3E-13 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS09190 c46a88bf0727508d4d6bc01cdc5f9fe3 86 Gene3D G3DSA:3.30.1660.10 22 86 4.5E-16 T 29-03-2018 IPR025543 Dodecin-like AM460_RS24905 9701c886ad280f703e9c5764563aa137 306 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 89 169 1.9E-4 T 29-03-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal AM460_RS24905 9701c886ad280f703e9c5764563aa137 306 SUPERFAMILY SSF53474 173 202 5.86E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24905 9701c886ad280f703e9c5764563aa137 306 SUPERFAMILY SSF53474 5 145 5.86E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24905 9701c886ad280f703e9c5764563aa137 306 SUPERFAMILY SSF53474 229 306 5.86E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24905 9701c886ad280f703e9c5764563aa137 306 Gene3D G3DSA:3.40.50.1820 2 306 6.7E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS13150 95b49282c2e2896c5346d5a28610602b 376 Gene3D G3DSA:1.10.620.20 1 346 7.0E-117 T 29-03-2018 AM460_RS13150 95b49282c2e2896c5346d5a28610602b 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.2E-49 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS13150 95b49282c2e2896c5346d5a28610602b 376 SUPERFAMILY SSF47240 3 340 4.87E-117 T 29-03-2018 IPR009078 Ferritin-like superfamily AM460_RS13150 95b49282c2e2896c5346d5a28610602b 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS24200 787304e09e3cef09c640759772fd43e4 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 3.9E-53 T 29-03-2018 IPR005619 Uncharacterised protein family, YajG AM460_RS24200 787304e09e3cef09c640759772fd43e4 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 20 9.8E-8 T 29-03-2018 IPR012640 Membrane lipoprotein, lipid attachment site AM460_RS26760 0216f71e9544dec747c9f13c769e11f9 313 Pfam PF04754 Putative transposase, YhgA-like 11 209 1.1E-79 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like AM460_RS26760 0216f71e9544dec747c9f13c769e11f9 313 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 311 6.2E-52 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM460_RS26760 0216f71e9544dec747c9f13c769e11f9 313 Gene3D G3DSA:1.10.10.60 247 311 1.2E-9 T 29-03-2018 AM460_RS05390 891a1371daa4116909d6321e23e4e8cd 157 Pfam PF13247 4Fe-4S dicluster domain 56 142 1.2E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS05390 891a1371daa4116909d6321e23e4e8cd 157 SUPERFAMILY SSF54862 1 145 4.71E-42 T 29-03-2018 AM460_RS05390 891a1371daa4116909d6321e23e4e8cd 157 Gene3D G3DSA:3.30.70.20 1 18 0.011 T 29-03-2018 AM460_RS05390 891a1371daa4116909d6321e23e4e8cd 157 Gene3D G3DSA:3.30.70.20 70 111 6.1E-17 T 29-03-2018 AM460_RS05390 891a1371daa4116909d6321e23e4e8cd 157 Gene3D G3DSA:3.30.70.20 19 69 3.2E-9 T 29-03-2018 AM460_RS05390 891a1371daa4116909d6321e23e4e8cd 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS05390 891a1371daa4116909d6321e23e4e8cd 157 Gene3D G3DSA:3.30.70.20 112 154 1.4E-7 T 29-03-2018 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 SUPERFAMILY SSF47446 329 431 3.6E-39 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:1.10.260.30 328 432 4.0E-39 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:3.40.50.300 92 297 7.8E-40 T 29-03-2018 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 SMART SM00963 1 86 2.4E-37 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 SMART SM00962 100 296 4.1E-120 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:1.20.120.140 1 91 1.8E-30 T 29-03-2018 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.2E-23 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 Pfam PF02978 Signal peptide binding domain 329 427 2.2E-33 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 SUPERFAMILY SSF52540 42 354 1.21E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 SMART SM00382 99 247 7.9E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.1E-75 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.006 T 29-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AM460_RS11330 dc53afad12a0f784058f00d211e93e90 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.2E-182 T 29-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.9E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.9E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.8E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 Gene3D G3DSA:1.10.10.60 1 37 1.1E-13 T 29-03-2018 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 97 185 2.9E-6 T 29-03-2018 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 Gene3D G3DSA:1.10.260.40 38 64 5.5E-11 T 29-03-2018 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 Gene3D G3DSA:1.10.357.10 65 187 1.5E-4 T 29-03-2018 AM460_RS18185 f1625a7f912e8790c6ff6152dfed29e4 188 SUPERFAMILY SSF46689 3 74 1.35E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 Gene3D G3DSA:1.50.10.10 56 549 1.3E-137 T 29-03-2018 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 80.478 T 29-03-2018 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 5.1E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 5.1E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 5.1E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 5.1E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 5.1E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 5.1E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 5.1E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 Pfam PF01204 Trehalase 70 546 3.2E-166 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS05725 ded60ffb072f7439bcbc06f64661d8c7 549 SUPERFAMILY SSF48208 55 547 7.99E-149 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM460_RS19980 244f900a709d08330dbbbe6a157ce87b 399 Pfam PF02687 FtsX-like permease family 296 392 1.7E-12 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM460_RS19980 244f900a709d08330dbbbe6a157ce87b 399 Gene3D G3DSA:1.10.3720.10 4 383 1.3E-5 T 29-03-2018 AM460_RS19980 244f900a709d08330dbbbe6a157ce87b 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 4.0E-148 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM460_RS19980 244f900a709d08330dbbbe6a157ce87b 399 Pfam PF12704 MacB-like periplasmic core domain 27 207 1.9E-13 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM460_RS09515 98ccca92f0aaca664d9aeaa0ad18d91f 225 Pfam PF00005 ABC transporter 21 164 1.7E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS09515 98ccca92f0aaca664d9aeaa0ad18d91f 225 SMART SM00382 28 213 9.6E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS09515 98ccca92f0aaca664d9aeaa0ad18d91f 225 SUPERFAMILY SSF52540 2 223 1.28E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS09515 98ccca92f0aaca664d9aeaa0ad18d91f 225 Gene3D G3DSA:3.40.50.300 1 224 3.3E-49 T 29-03-2018 AM460_RS07340 f830941908455cffa71f768b2c5b2a65 165 Gene3D G3DSA:2.30.30.220 10 107 7.0E-42 T 29-03-2018 IPR007481 Stringent starvation protein B AM460_RS07340 f830941908455cffa71f768b2c5b2a65 165 PIRSF PIRSF005276 3 165 4.4E-62 T 29-03-2018 IPR007481 Stringent starvation protein B AM460_RS07340 f830941908455cffa71f768b2c5b2a65 165 Pfam PF04386 Stringent starvation protein B 9 165 3.0E-45 T 29-03-2018 IPR007481 Stringent starvation protein B AM460_RS07340 f830941908455cffa71f768b2c5b2a65 165 SUPERFAMILY SSF101738 4 119 7.46E-49 T 29-03-2018 IPR007481 Stringent starvation protein B AM460_RS25175 9f85bb4dc0185ee4be8386e187f8f5d8 165 SMART SM01321 9 119 5.5E-27 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS25175 9f85bb4dc0185ee4be8386e187f8f5d8 165 Gene3D G3DSA:3.30.70.1290 1 125 5.3E-30 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS25175 9f85bb4dc0185ee4be8386e187f8f5d8 165 SUPERFAMILY SSF143422 1 125 5.76E-30 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM460_RS14635 c157fc249b7f2529b9e3e9505d71ca75 495 TIGRFAM TIGR00797 matE: MATE efflux family protein 48 452 6.5E-69 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS14635 c157fc249b7f2529b9e3e9505d71ca75 495 PIRSF PIRSF006603 28 487 5.0E-70 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS14635 c157fc249b7f2529b9e3e9505d71ca75 495 Pfam PF01554 MatE 48 208 1.5E-37 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS14635 c157fc249b7f2529b9e3e9505d71ca75 495 Pfam PF01554 MatE 278 439 2.2E-20 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82693 135 182 2.09E-26 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82693 274 330 2.09E-26 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82866 834 1026 6.28E-44 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 Gene3D G3DSA:3.30.2090.10 180 273 1.3E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 Gene3D G3DSA:3.30.70.1430 567 668 3.5E-19 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82714 723 810 1.44E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82866 296 497 6.28E-47 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 Gene3D G3DSA:1.20.1640.10 274 499 5.6E-43 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 Gene3D G3DSA:1.20.1640.10 824 1029 3.1E-36 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82714 182 272 1.44E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82693 672 722 1.12E-23 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82693 809 857 1.12E-23 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.9E-112 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 Gene3D G3DSA:3.30.70.1430 38 140 6.1E-31 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 Gene3D G3DSA:3.30.70.1440 672 769 2.1E-20 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82693 38 132 3.3E-28 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 SUPERFAMILY SSF82693 565 669 4.45E-29 T 29-03-2018 AM460_RS05755 a560eca1bce26767542f0ff1c4c636ce 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM460_RS08625 eee97b863843bcbf3a8e8a70fd4df500 230 Gene3D G3DSA:3.40.50.300 5 228 2.9E-15 T 29-03-2018 AM460_RS08625 eee97b863843bcbf3a8e8a70fd4df500 230 SUPERFAMILY SSF52540 6 225 8.22E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23435 7a9f54ce53928f27650816371455a304 318 Pfam PF01497 Periplasmic binding protein 49 297 1.5E-29 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS23435 7a9f54ce53928f27650816371455a304 318 Gene3D G3DSA:3.40.50.1980 21 154 3.6E-22 T 29-03-2018 AM460_RS23435 7a9f54ce53928f27650816371455a304 318 Gene3D G3DSA:3.40.50.1980 155 318 1.8E-33 T 29-03-2018 AM460_RS23435 7a9f54ce53928f27650816371455a304 318 SUPERFAMILY SSF53807 31 317 6.28E-50 T 29-03-2018 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 TIGRFAM TIGR01334 modD: modD protein 2 278 1.2E-151 T 29-03-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 Gene3D G3DSA:3.90.1170.20 3 134 6.0E-22 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 276 2.3E-30 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 Gene3D G3DSA:3.20.20.70 135 267 1.5E-23 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 PIRSF PIRSF006250 1 280 1.3E-66 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 SUPERFAMILY SSF51690 121 276 1.1E-35 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 SUPERFAMILY SSF54675 2 105 8.24E-22 T 29-03-2018 AM460_RS19295 a5a7979cf9a60daf42b28a00886b1235 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 103 9.4E-20 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM460_RS06435 04beb8231f188cdedecb1c4f660ed4ad 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 704 0.0 T 29-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM460_RS06435 04beb8231f188cdedecb1c4f660ed4ad 711 Gene3D G3DSA:1.20.1250.20 2 384 0.003 T 29-03-2018 AM460_RS06435 04beb8231f188cdedecb1c4f660ed4ad 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 3 697 0.0 T 29-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 SUPERFAMILY SSF49503 120 282 2.8E-54 T 29-03-2018 IPR008972 Cupredoxin AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 2.2E-5 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 SUPERFAMILY SSF81464 29 116 8.18E-24 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 PIRSF PIRSF000292 1 313 1.7E-134 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 Gene3D G3DSA:2.60.40.420 114 281 8.6E-53 T 29-03-2018 IPR008972 Cupredoxin AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 2.7E-124 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 Pfam PF06481 COX Aromatic Rich Motif 239 285 2.8E-18 T 29-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AM460_RS24210 7ca59604d95fd71671d0ed2f525f1bf4 315 Gene3D G3DSA:1.10.287.90 28 113 1.1E-19 T 29-03-2018 AM460_RS14385 26bce26c82d03474c71b8023d1e24dda 721 Pfam PF00593 TonB dependent receptor 262 719 4.4E-31 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS14385 26bce26c82d03474c71b8023d1e24dda 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 164 3.5E-13 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS14385 26bce26c82d03474c71b8023d1e24dda 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 721 7.3E-86 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS14385 26bce26c82d03474c71b8023d1e24dda 721 Gene3D G3DSA:2.170.130.10 20 177 4.7E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS14385 26bce26c82d03474c71b8023d1e24dda 721 Gene3D G3DSA:2.40.170.20 178 721 7.2E-60 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS14385 26bce26c82d03474c71b8023d1e24dda 721 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 704 721 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS14385 26bce26c82d03474c71b8023d1e24dda 721 SUPERFAMILY SSF56935 26 721 4.51E-97 T 29-03-2018 AM460_RS08395 28a8b4a3d9a5ea8750cd2036f45b4819 193 Gene3D G3DSA:3.40.50.360 1 193 1.2E-35 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS08395 28a8b4a3d9a5ea8750cd2036f45b4819 193 SUPERFAMILY SSF52218 1 192 4.61E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS08395 28a8b4a3d9a5ea8750cd2036f45b4819 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.3E-37 T 29-03-2018 IPR003680 Flavodoxin-like fold AM460_RS11575 ee78ffbef5892c3fe3e156952182ddef 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 135.588 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM460_RS11575 ee78ffbef5892c3fe3e156952182ddef 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.8E-117 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM460_RS11575 ee78ffbef5892c3fe3e156952182ddef 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 9.8E-108 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM460_RS11575 ee78ffbef5892c3fe3e156952182ddef 243 SUPERFAMILY SSF63892 4 241 5.89E-104 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM460_RS11575 ee78ffbef5892c3fe3e156952182ddef 243 Gene3D G3DSA:3.20.20.70 4 238 2.5E-108 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS01120 6259995ec0eff211be432f492712dca4 461 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 7.7E-14 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS01120 6259995ec0eff211be432f492712dca4 461 Pfam PF13817 IS66 C-terminal element 417 454 2.5E-13 T 29-03-2018 AM460_RS01120 6259995ec0eff211be432f492712dca4 461 Gene3D G3DSA:1.20.120.330 4 401 1.8E-8 T 29-03-2018 AM460_RS01120 6259995ec0eff211be432f492712dca4 461 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 161 3.3E-12 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS01120 6259995ec0eff211be432f492712dca4 461 Pfam PF03050 Transposase IS66 family 176 399 7.6E-73 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS04970 395005dcb87df7237824073e9e5d063b 226 Pfam PF07385 D-lyxose isomerase 1 222 2.9E-88 T 29-03-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 AM460_RS04970 395005dcb87df7237824073e9e5d063b 226 Gene3D G3DSA:2.60.120.10 72 200 3.3E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS21285 4f77b69d5001ba9fc7590c12d8fa535f 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 3.8E-208 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM460_RS21285 4f77b69d5001ba9fc7590c12d8fa535f 760 Gene3D G3DSA:3.20.70.20 2 760 6.1E-297 T 29-03-2018 AM460_RS21285 4f77b69d5001ba9fc7590c12d8fa535f 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM460_RS21285 4f77b69d5001ba9fc7590c12d8fa535f 760 Pfam PF01228 Glycine radical 630 741 4.4E-43 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM460_RS21285 4f77b69d5001ba9fc7590c12d8fa535f 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM460_RS21285 4f77b69d5001ba9fc7590c12d8fa535f 760 SUPERFAMILY SSF51998 4 759 5.49E-296 T 29-03-2018 AM460_RS21285 4f77b69d5001ba9fc7590c12d8fa535f 760 PIRSF PIRSF000379 8 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 Gene3D G3DSA:3.40.1190.20 3 306 2.3E-70 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 Pfam PF00294 pfkB family carbohydrate kinase 3 298 6.0E-71 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 SUPERFAMILY SSF53613 2 302 3.27E-81 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 PRINTS PR00990 Ribokinase signature 216 227 2.5E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 PRINTS PR00990 Ribokinase signature 23 42 2.5E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS10405 14f99bad39766df63f7f9fc5a9a97581 306 PRINTS PR00990 Ribokinase signature 176 191 2.5E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 Gene3D G3DSA:3.40.50.980 15 178 2.7E-28 T 29-03-2018 AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 Pfam PF00501 AMP-binding enzyme 21 422 6.3E-79 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 Gene3D G3DSA:3.40.50.980 179 332 1.5E-34 T 29-03-2018 AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 Gene3D G3DSA:3.30.300.30 417 525 3.3E-23 T 29-03-2018 AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 Gene3D G3DSA:2.30.38.10 333 415 1.3E-20 T 29-03-2018 AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 8.6E-14 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS14695 65fea4f32d39fc8d7f9b6510157c08cd 525 SUPERFAMILY SSF56801 10 518 6.28E-126 T 29-03-2018 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 SUPERFAMILY SSF116878 379 454 2.48E-51 T 29-03-2018 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 SUPERFAMILY SSF116878 121 220 2.48E-51 T 29-03-2018 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 Gene3D G3DSA:3.30.1360.120 1 121 1.2E-40 T 29-03-2018 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 4.7E-101 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 Pfam PF12631 MnmE helical domain 123 451 3.8E-61 T 29-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 Gene3D G3DSA:1.20.120.430 122 279 4.8E-27 T 29-03-2018 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 Gene3D G3DSA:1.20.120.430 280 454 7.1E-35 T 29-03-2018 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 Pfam PF01926 50S ribosome-binding GTPase 218 336 6.0E-25 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 SUPERFAMILY SSF52540 72 152 2.66E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 SUPERFAMILY SSF52540 188 372 2.66E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 4.1E-34 T 29-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 6.4E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM460_RS04665 436fd19f6329aa08e66e365e8a5bb4fa 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.378 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM460_RS12375 46b03e93eba98dbcb2c9463dcc4d52a9 108 Pfam PF10697 Protein of unknown function (DUF2502) 23 106 2.1E-19 T 29-03-2018 IPR019638 Protein of unknown function DUF2502 AM460_RS03305 32228ddaaf08de94c62e1ce7bd3de2ae 113 Gene3D G3DSA:3.40.50.2300 3 102 2.1E-34 T 29-03-2018 AM460_RS03305 32228ddaaf08de94c62e1ce7bd3de2ae 113 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 85 1.3E-25 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM460_RS03305 32228ddaaf08de94c62e1ce7bd3de2ae 113 SUPERFAMILY SSF52794 4 98 2.62E-27 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS03305 32228ddaaf08de94c62e1ce7bd3de2ae 113 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 2.1E-13 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS07325 7e83a2f8447b1a959eb026f7a47d4917 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.138 T 29-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AM460_RS07325 7e83a2f8447b1a959eb026f7a47d4917 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 29-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AM460_RS07325 7e83a2f8447b1a959eb026f7a47d4917 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-46 T 29-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AM460_RS07325 7e83a2f8447b1a959eb026f7a47d4917 130 SUPERFAMILY SSF54211 5 130 1.59E-49 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS07325 7e83a2f8447b1a959eb026f7a47d4917 130 Gene3D G3DSA:3.30.230.10 3 130 1.2E-52 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 SUPERFAMILY SSF56837 389 626 1.57E-82 T 29-03-2018 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 ProDom PD002657 PLASMID COLICIN BACTERIOCIN TRANSMEMBRANE ANTIBIOTIC MEMBRANE ANTIMICROBIAL E1 IB 3D-STRUCTURE 430 624 6.0E-109 T 29-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 PRINTS PR00280 Channel forming colicin signature 503 519 4.0E-20 T 29-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 PRINTS PR00280 Channel forming colicin signature 484 499 4.0E-20 T 29-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 PRINTS PR00280 Channel forming colicin signature 561 574 4.0E-20 T 29-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 PRINTS PR00280 Channel forming colicin signature 575 593 4.0E-20 T 29-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 Gene3D G3DSA:1.10.490.30 455 623 6.5E-71 T 29-03-2018 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 Pfam PF11504 Colicin Ia 282 353 8.1E-51 T 29-03-2018 IPR014740 Channel forming colicin, central receptor recognition GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 SUPERFAMILY SSF58096 23 448 2.35E-265 T 29-03-2018 IPR014739 Channel forming colicin, N-terminal domain GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 Gene3D G3DSA:1.20.250.10 313 454 7.1E-50 T 29-03-2018 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 Gene3D G3DSA:1.20.250.10 23 294 4.0E-158 T 29-03-2018 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 ProSitePatterns PS00276 Channel forming colicins signature. 561 572 - T 29-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM460_RS26980 c2743e6ab996c80690d0a7b4206ff665 626 Pfam PF01024 Colicin pore forming domain 443 623 1.0E-59 T 29-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM460_RS20140 2d8841d0af35a27834efe09cc09d3e22 106 Pfam PF10848 Protein of unknown function (DUF2655) 1 82 2.5E-61 T 29-03-2018 IPR020371 Uncharacterised protein family YceQ AM460_RS20140 2d8841d0af35a27834efe09cc09d3e22 106 ProDom PD078424 YCEQ 1 82 1.0E-43 T 29-03-2018 IPR020371 Uncharacterised protein family YceQ AM460_RS15260 6150e88911713e11e21257aed5fdb98a 172 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 1.0E-54 T 29-03-2018 IPR012550 Protein of unknown function DUF1706 AM460_RS15260 6150e88911713e11e21257aed5fdb98a 172 Gene3D G3DSA:1.20.120.450 1 150 2.2E-11 T 29-03-2018 AM460_RS15260 6150e88911713e11e21257aed5fdb98a 172 PIRSF PIRSF031551 1 170 1.3E-60 T 29-03-2018 IPR012550 Protein of unknown function DUF1706 AM460_RS00880 6150e88911713e11e21257aed5fdb98a 172 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 1.0E-54 T 29-03-2018 IPR012550 Protein of unknown function DUF1706 AM460_RS00880 6150e88911713e11e21257aed5fdb98a 172 Gene3D G3DSA:1.20.120.450 1 150 2.2E-11 T 29-03-2018 AM460_RS00880 6150e88911713e11e21257aed5fdb98a 172 PIRSF PIRSF031551 1 170 1.3E-60 T 29-03-2018 IPR012550 Protein of unknown function DUF1706 AM460_RS18545 89739e3f0f6ffcffe075fd0c2e260bc7 553 Pfam PF03354 Phage Terminase 64 535 2.5E-26 T 29-03-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type AM460_RS12805 f4eb4d7cb66164480bde4b4c647dc70e 238 Gene3D G3DSA:1.10.3720.10 5 234 1.5E-32 T 29-03-2018 AM460_RS12805 f4eb4d7cb66164480bde4b4c647dc70e 238 SUPERFAMILY SSF161098 17 223 6.28E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS12805 f4eb4d7cb66164480bde4b4c647dc70e 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 224 3.4E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS12805 f4eb4d7cb66164480bde4b4c647dc70e 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.4E-13 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS05510 77d3076ba365129eb9031f51cb6df6ad 146 Gene3D G3DSA:3.40.630.30 1 78 4.7E-11 T 29-03-2018 AM460_RS05510 77d3076ba365129eb9031f51cb6df6ad 146 Pfam PF13673 Acetyltransferase (GNAT) domain 47 124 2.8E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS05510 77d3076ba365129eb9031f51cb6df6ad 146 Gene3D G3DSA:3.40.630.30 79 126 1.2E-8 T 29-03-2018 AM460_RS05510 77d3076ba365129eb9031f51cb6df6ad 146 SUPERFAMILY SSF55729 1 140 5.85E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS07680 b4c8bf3217a4988936d25e96ea0b4ed7 167 Pfam PF13508 Acetyltransferase (GNAT) domain 45 123 7.8E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS07680 b4c8bf3217a4988936d25e96ea0b4ed7 167 Gene3D G3DSA:3.40.630.30 1 129 4.2E-19 T 29-03-2018 AM460_RS07680 b4c8bf3217a4988936d25e96ea0b4ed7 167 SUPERFAMILY SSF55729 1 162 1.2E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS16325 e50988174a047faa057f9a6d0fa0d53b 106 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 1.5E-34 T 29-03-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM460_RS16325 e50988174a047faa057f9a6d0fa0d53b 106 SUPERFAMILY SSF52794 4 102 1.33E-32 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS16325 e50988174a047faa057f9a6d0fa0d53b 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 8.6E-16 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS16325 e50988174a047faa057f9a6d0fa0d53b 106 Gene3D G3DSA:3.40.50.2300 5 106 2.1E-29 T 29-03-2018 AM460_RS19015 ee1d407a168ccda7dec68cfc7fa9b7eb 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 127 3.7E-35 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AM460_RS19015 ee1d407a168ccda7dec68cfc7fa9b7eb 130 PIRSF PIRSF005610 1 125 7.4E-20 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AM460_RS19180 3b93b0f63a25df0b4afe93e574e84c7e 130 Pfam PF10980 Protein of unknown function (DUF2787) 20 126 5.3E-35 T 29-03-2018 IPR021248 Protein of unknown function DUF2787 AM460_RS19905 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SUPERFAMILY SSF52172 1 173 1.12E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS19905 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.6E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS19905 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00862 145 220 2.2E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS19905 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:3.40.50.2300 1 118 2.6E-33 T 29-03-2018 AM460_RS19905 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:1.10.10.10 119 223 2.6E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS19905 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00448 1 112 4.7E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS19905 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00072 Response regulator receiver domain 3 112 2.5E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 SUPERFAMILY SSF46785 6 90 2.27E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 Gene3D G3DSA:1.10.10.10 2 86 7.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 SUPERFAMILY SSF53850 92 294 1.32E-36 T 29-03-2018 AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 Gene3D G3DSA:3.40.190.10 181 268 5.0E-20 T 29-03-2018 AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 Pfam PF03466 LysR substrate binding domain 90 294 2.6E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS17990 6165f7d97056fc7abc6b5439b1bd6a1b 299 Gene3D G3DSA:3.40.190.10 94 180 1.0E-13 T 29-03-2018 AM460_RS19830 e38481d070a096398481af5d2b1c1263 226 Pfam PF09588 YqaJ-like viral recombinase domain 24 166 5.3E-25 T 29-03-2018 IPR019080 YqaJ viral recombinase AM460_RS19830 e38481d070a096398481af5d2b1c1263 226 Gene3D G3DSA:3.90.320.10 3 226 3.9E-48 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM460_RS19830 e38481d070a096398481af5d2b1c1263 226 SUPERFAMILY SSF52980 5 225 1.07E-67 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 SMART SM00420 6 58 2.3E-21 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 SUPERFAMILY SSF46785 5 72 5.86E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 4.1E-19 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 Gene3D G3DSA:3.40.50.1360 65 235 9.5E-34 T 29-03-2018 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 SUPERFAMILY SSF100950 76 234 1.15E-26 T 29-03-2018 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 Gene3D G3DSA:1.10.10.10 2 60 4.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 2.2E-47 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 SMART SM01134 73 233 3.6E-65 T 29-03-2018 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS22950 a5996f02ad4384bf2ee620fdb59ee768 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 7.2E-52 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.3E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 Gene3D G3DSA:3.30.70.20 71 105 9.7E-15 T 29-03-2018 AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 Gene3D G3DSA:3.30.70.20 22 70 7.2E-7 T 29-03-2018 AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 SUPERFAMILY SSF54862 33 153 5.44E-29 T 29-03-2018 AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 Gene3D G3DSA:3.30.70.20 106 172 1.6E-7 T 29-03-2018 AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.93 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12935 ae0700384201c95c88810a02dd3a21f9 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.4E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.4E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SMART SM01134 74 232 3.4E-38 T 29-03-2018 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Hamap MF_01563 HTH-type transcriptional regulator UlaR [ulaR]. 1 251 71.049 T 29-03-2018 IPR023711 Transcription regulator HTH, UlaR GO:0005737|GO:0045892 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Gene3D G3DSA:1.10.10.10 1 77 9.8E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.3E-37 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.4E-20 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SUPERFAMILY SSF46785 5 60 2.11E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SMART SM00420 6 58 4.8E-23 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SUPERFAMILY SSF100950 75 234 1.67E-23 T 29-03-2018 AM460_RS01785 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Gene3D G3DSA:3.40.50.1360 78 238 2.2E-24 T 29-03-2018 AM460_RS16650 03ce7b850505f980c07bcc8efece90c6 334 SMART SM00257 41 85 4.0E-8 T 29-03-2018 IPR018392 LysM domain AM460_RS16650 03ce7b850505f980c07bcc8efece90c6 334 Gene3D G3DSA:2.40.440.10 91 234 8.5E-31 T 29-03-2018 AM460_RS16650 03ce7b850505f980c07bcc8efece90c6 334 Pfam PF01476 LysM domain 42 85 4.1E-10 T 29-03-2018 IPR018392 LysM domain AM460_RS16650 03ce7b850505f980c07bcc8efece90c6 334 Pfam PF03734 L,D-transpeptidase catalytic domain 97 232 4.1E-21 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM460_RS16650 03ce7b850505f980c07bcc8efece90c6 334 Gene3D G3DSA:3.10.350.10 38 87 4.2E-10 T 29-03-2018 AM460_RS16650 03ce7b850505f980c07bcc8efece90c6 334 SUPERFAMILY SSF141523 94 232 8.89E-30 T 29-03-2018 AM460_RS01090 7241f7ef92cc0fd23623a2f0a4a7a00e 201 Pfam PF11726 Inovirus Gp2 24 199 2.9E-53 T 29-03-2018 AM460_RS11185 986a928fceb003a0f7a1e508424319cb 91 Pfam PF13856 ATP-binding sugar transporter from pro-phage 1 88 7.7E-15 T 29-03-2018 IPR025601 ATP-binding sugar transporter-like protein AM460_RS11185 986a928fceb003a0f7a1e508424319cb 91 SUPERFAMILY SSF69279 1 91 1.7E-34 T 29-03-2018 AM460_RS11185 986a928fceb003a0f7a1e508424319cb 91 Gene3D G3DSA:2.40.10.210 25 91 4.4E-29 T 29-03-2018 AM460_RS13465 f49f9ea811d89e701c0cc9d9a464363a 188 SUPERFAMILY SSF54001 67 185 1.86E-41 T 29-03-2018 AM460_RS13465 f49f9ea811d89e701c0cc9d9a464363a 188 Gene3D G3DSA:3.90.1720.10 62 188 1.2E-40 T 29-03-2018 AM460_RS13465 f49f9ea811d89e701c0cc9d9a464363a 188 Pfam PF00877 NlpC/P60 family 79 183 2.1E-34 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM460_RS16860 2732d501db3bbd3355d58a6104b0f34d 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.1E-7 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Pfam PF13018 Extended Signal Peptide of Type V secretion system 6 28 4.8E-8 T 29-03-2018 IPR024973 ESPR domain AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Pfam PF03797 Autotransporter beta-domain 747 1016 1.9E-44 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Gene3D G3DSA:2.160.20.20 353 707 6.0E-36 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 SUPERFAMILY SSF103515 713 1040 1.12E-26 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Gene3D G3DSA:2.40.128.130 708 1040 3.6E-37 T 29-03-2018 AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 211 245 4.8E-6 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 269 302 5.2E-6 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 248 283 8.5E-7 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 165 192 7.0E-6 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 339 375 1.4E-10 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 111 142 1.6E-6 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 397 458 2.2E-16 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 143 192 1.3E-7 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 245 294 3.1E-9 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 324 386 1.4E-21 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 SMART SM00869 742 1027 3.4E-19 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS08885 a4a7f3c667db1da4f54182f413c7f490 1040 SUPERFAMILY SSF51126 215 703 9.42E-43 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 Gene3D G3DSA:3.20.20.70 2 295 3.4E-80 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 SMART SM01130 4 293 6.3E-93 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 PIRSF PIRSF001365 1 295 7.2E-72 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 Pfam PF00701 Dihydrodipicolinate synthetase family 6 272 2.8E-60 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS22970 82b96e6d9eb3c32e0080e215ded20c78 295 SUPERFAMILY SSF51569 2 293 6.07E-76 T 29-03-2018 AM460_RS01590 c15148e4e4eddfd34b07fb979ed0707d 577 Gene3D G3DSA:3.10.20.310 24 102 0.7 T 29-03-2018 AM460_RS01590 c15148e4e4eddfd34b07fb979ed0707d 577 Pfam PF01103 Surface antigen 284 574 5.9E-31 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM460_RS01590 c15148e4e4eddfd34b07fb979ed0707d 577 Gene3D G3DSA:2.40.160.50 220 576 1.9E-59 T 29-03-2018 AM460_RS01590 c15148e4e4eddfd34b07fb979ed0707d 577 Pfam PF17243 POTRA domain TamA domain 1 26 100 1.3E-21 T 29-03-2018 IPR035243 TamA, POTRA domain 1 AM460_RS01590 c15148e4e4eddfd34b07fb979ed0707d 577 Gene3D G3DSA:3.10.20.310 103 188 9.5E-9 T 29-03-2018 AM460_RS01590 c15148e4e4eddfd34b07fb979ed0707d 577 Pfam PF07244 Surface antigen variable number repeat 189 246 1.5E-8 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM460_RS13765 73d6084f437c6796efb795249317dc71 153 Pfam PF06998 Protein of unknown function (DUF1307) 28 150 9.9E-42 T 29-03-2018 IPR009736 Protein of unknown function DUF1307 AM460_RS13765 73d6084f437c6796efb795249317dc71 153 SUPERFAMILY SSF160704 24 153 6.28E-40 T 29-03-2018 IPR009736 Protein of unknown function DUF1307 AM460_RS13765 73d6084f437c6796efb795249317dc71 153 PIRSF PIRSF006187 1 153 7.9E-59 T 29-03-2018 IPR009736 Protein of unknown function DUF1307 AM460_RS13765 73d6084f437c6796efb795249317dc71 153 Gene3D G3DSA:3.30.1830.10 28 152 8.3E-37 T 29-03-2018 AM460_RS06595 1af492895cbadc67eb6af6d8f8fc1310 200 Gene3D G3DSA:1.10.3290.10 17 196 4.4E-22 T 29-03-2018 IPR003812 Fido domain AM460_RS06595 1af492895cbadc67eb6af6d8f8fc1310 200 Pfam PF02661 Fic/DOC family 58 152 3.7E-14 T 29-03-2018 IPR003812 Fido domain AM460_RS06595 1af492895cbadc67eb6af6d8f8fc1310 200 SUPERFAMILY SSF140931 41 195 4.05E-29 T 29-03-2018 IPR003812 Fido domain AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 PRINTS PR00113 Alkaline phosphatase signature 121 136 1.2E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 PRINTS PR00113 Alkaline phosphatase signature 64 84 1.2E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 PRINTS PR00113 Alkaline phosphatase signature 320 349 1.2E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 PRINTS PR00113 Alkaline phosphatase signature 221 231 1.2E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 PRINTS PR00113 Alkaline phosphatase signature 158 178 1.2E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 SMART SM00098 65 471 6.9E-242 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 ProSitePatterns PS00123 Alkaline phosphatase active site. 121 129 - T 29-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 Pfam PF00245 Alkaline phosphatase 64 430 3.9E-134 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 Gene3D G3DSA:3.40.720.10 23 471 2.0E-131 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS24460 ed21cca27e377dca9da72f5fb4b89e16 471 SUPERFAMILY SSF53649 37 470 2.38E-141 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 SUPERFAMILY SSF50494 32 85 1.31E-32 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 SUPERFAMILY SSF50494 113 270 1.31E-32 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 29-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 212 228 5.2E-23 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 69 86 5.2E-23 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 178 191 5.2E-23 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 232 244 5.2E-23 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 44 61 5.2E-23 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 29-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 Pfam PF00089 Trypsin 50 244 5.6E-11 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 Gene3D G3DSA:2.40.10.10 166 272 1.6E-12 T 29-03-2018 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 Gene3D G3DSA:2.40.10.10 76 155 0.0015 T 29-03-2018 AM460_RS17100 fbc6abcb38fcafde30844a1d5dde7b4f 273 Gene3D G3DSA:2.40.10.10 47 75 7.3E-6 T 29-03-2018 AM460_RS18225 56f79aae5057c73d4c2beb937bad2deb 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 34 2.0E-6 T 29-03-2018 AM460_RS18225 56f79aae5057c73d4c2beb937bad2deb 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 8.0E-8 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM460_RS11570 42389b66c69d4b6314aab19100d429a3 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.1E-37 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM460_RS11570 42389b66c69d4b6314aab19100d429a3 242 SUPERFAMILY SSF50249 4 75 3.43E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS11570 42389b66c69d4b6314aab19100d429a3 242 Pfam PF02565 Recombination protein O C terminal 83 226 3.2E-23 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM460_RS11570 42389b66c69d4b6314aab19100d429a3 242 SUPERFAMILY SSF57863 86 165 2.59E-7 T 29-03-2018 AM460_RS11570 42389b66c69d4b6314aab19100d429a3 242 Gene3D G3DSA:2.40.50.140 1 76 9.7E-26 T 29-03-2018 AM460_RS11570 42389b66c69d4b6314aab19100d429a3 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.143 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM460_RS11570 42389b66c69d4b6314aab19100d429a3 242 Pfam PF11967 Recombination protein O N terminal 4 76 1.2E-22 T 29-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AM460_RS15770 3182c2e590e2a982200fbc51cfe0daa7 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 3.0E-38 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS15770 3182c2e590e2a982200fbc51cfe0daa7 76 Pfam PF06440 DNA polymerase III, theta subunit 4 71 7.0E-38 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS15770 3182c2e590e2a982200fbc51cfe0daa7 76 SUPERFAMILY SSF46575 1 76 3.27E-35 T 29-03-2018 AM460_RS15770 3182c2e590e2a982200fbc51cfe0daa7 76 Gene3D G3DSA:1.20.58.250 3 65 4.9E-30 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS04435 19be1fe83a694bc8fcd9e001003ab5fe 296 Gene3D G3DSA:3.40.50.2300 27 137 1.1E-26 T 29-03-2018 AM460_RS04435 19be1fe83a694bc8fcd9e001003ab5fe 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.3E-58 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS04435 19be1fe83a694bc8fcd9e001003ab5fe 296 Gene3D G3DSA:3.40.50.2300 138 293 7.4E-43 T 29-03-2018 AM460_RS04435 19be1fe83a694bc8fcd9e001003ab5fe 296 SUPERFAMILY SSF53822 26 295 1.1E-88 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS00510 768f9b9f53ee5ffd3f16028b8c0dc6e3 357 SUPERFAMILY SSF52151 21 279 4.45E-43 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS00510 768f9b9f53ee5ffd3f16028b8c0dc6e3 357 Gene3D G3DSA:3.40.1090.10 17 268 9.9E-30 T 29-03-2018 AM460_RS00510 768f9b9f53ee5ffd3f16028b8c0dc6e3 357 Pfam PF01734 Patatin-like phospholipase 27 195 8.9E-21 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM460_RS02550 6f778596a627bf6124033e43707f69ac 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS02550 6f778596a627bf6124033e43707f69ac 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 60.688 T 29-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 AM460_RS02550 6f778596a627bf6124033e43707f69ac 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 29-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 AM460_RS02550 6f778596a627bf6124033e43707f69ac 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS02550 6f778596a627bf6124033e43707f69ac 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 8.8E-63 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS02550 6f778596a627bf6124033e43707f69ac 549 Pfam PF00474 Sodium:solute symporter family 63 468 4.5E-140 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS02750 e1f2a93061cce6b763963e1b027fbf03 331 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 329 53.161 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM460_RS02750 e1f2a93061cce6b763963e1b027fbf03 331 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 328 1.9E-175 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM460_RS02750 e1f2a93061cce6b763963e1b027fbf03 331 Pfam PF01207 Dihydrouridine synthase (Dus) 16 325 7.5E-101 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS02750 e1f2a93061cce6b763963e1b027fbf03 331 PIRSF PIRSF006621 3 327 3.4E-72 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS02750 e1f2a93061cce6b763963e1b027fbf03 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM460_RS02750 e1f2a93061cce6b763963e1b027fbf03 331 SUPERFAMILY SSF51395 13 321 3.13E-71 T 29-03-2018 AM460_RS02750 e1f2a93061cce6b763963e1b027fbf03 331 Gene3D G3DSA:3.20.20.70 11 251 2.0E-40 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS05295 11c2e626548147342d3c1ac7545e1b5c 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 1.7E-181 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM460_RS05295 11c2e626548147342d3c1ac7545e1b5c 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 257.747 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM460_RS05295 11c2e626548147342d3c1ac7545e1b5c 463 Gene3D G3DSA:3.40.640.10 102 346 3.3E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS05295 11c2e626548147342d3c1ac7545e1b5c 463 SUPERFAMILY SSF53383 74 462 1.75E-50 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS05295 11c2e626548147342d3c1ac7545e1b5c 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 460 2.8E-191 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM460_RS05295 11c2e626548147342d3c1ac7545e1b5c 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.5E-9 T 29-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM460_RS25485 4ddf5054a88b91559aee6478ea4a0b69 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 3.3E-55 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 AM460_RS25485 4ddf5054a88b91559aee6478ea4a0b69 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-67 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 AM460_RS25485 4ddf5054a88b91559aee6478ea4a0b69 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.845 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 325 2.2E-141 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 Gene3D G3DSA:3.40.50.300 270 326 4.4E-7 T 29-03-2018 AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 Gene3D G3DSA:3.40.50.300 115 269 1.2E-25 T 29-03-2018 AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 SUPERFAMILY SSF52540 4 324 5.34E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 Pfam PF00437 Type II/IV secretion system protein 74 258 1.8E-41 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 190 204 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 Gene3D G3DSA:3.30.450.90 1 97 1.4E-16 T 29-03-2018 AM460_RS09390 92efa110a54a2879b4a7b2acaa8a534e 326 SMART SM00382 119 271 4.9E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS10030 7c8c34b5c35f7d2dbf3d6b0e2cfe891e 391 Pfam PF00155 Aminotransferase class I and II 29 376 1.4E-42 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS10030 7c8c34b5c35f7d2dbf3d6b0e2cfe891e 391 SUPERFAMILY SSF53383 3 386 9.18E-86 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS10030 7c8c34b5c35f7d2dbf3d6b0e2cfe891e 391 Gene3D G3DSA:3.40.640.10 42 292 3.9E-37 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS10030 7c8c34b5c35f7d2dbf3d6b0e2cfe891e 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 384 3.7E-109 T 29-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM460_RS10030 7c8c34b5c35f7d2dbf3d6b0e2cfe891e 391 Gene3D G3DSA:3.90.1150.10 293 388 4.8E-15 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS21415 08ed735c0e2ab0be526edf5c7d055b39 93 Pfam PF04550 Phage holin family 2 1 86 1.4E-37 T 29-03-2018 IPR007633 Bacteriophage P2, GpY, holin AM460_RS21415 08ed735c0e2ab0be526edf5c7d055b39 93 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 88 3.0E-42 T 29-03-2018 IPR007633 Bacteriophage P2, GpY, holin AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 PIRSF PIRSF000077 36 139 2.0E-33 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 4.5E-37 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 Gene3D G3DSA:3.40.30.10 33 139 2.8E-35 T 29-03-2018 AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 55 63 1.7E-9 T 29-03-2018 AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 103 114 1.7E-9 T 29-03-2018 AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 63 72 1.7E-9 T 29-03-2018 AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 SUPERFAMILY SSF52833 24 138 2.0E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS11475 e9d50cfbfaea17e8ebb59f9add77f07a 139 Pfam PF00085 Thioredoxin 37 137 1.7E-28 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.0E-117 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 SUPERFAMILY SSF52172 3 184 2.57E-43 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 Pfam PF00072 Response regulator receiver domain 5 117 4.5E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 SMART SM00448 3 116 6.2E-46 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 SMART SM00862 150 225 1.8E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 Gene3D G3DSA:1.10.10.10 126 228 2.0E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 Gene3D G3DSA:3.40.50.2300 2 125 5.3E-37 T 29-03-2018 AM460_RS24375 0e45b31dbd48b4685a1831b0524fc60d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.3E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS08825 0b209263a17404be0b57bad802dc1abd 162 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 58 2.0E-23 T 29-03-2018 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.6E-22 T 29-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 29-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 29-03-2018 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM460_RS16440 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM460_RS00075 0d163244e42ae3e6e733c16eccc39416 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.9E-91 T 29-03-2018 IPR005583 Peroxide stress protein YaaA AM460_RS00075 0d163244e42ae3e6e733c16eccc39416 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.424 T 29-03-2018 IPR005583 Peroxide stress protein YaaA AM460_RS07285 1e53a06f337176a1b4bd9e96a8ebbd36 87 SUPERFAMILY SSF159871 3 87 2.75E-27 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS07285 1e53a06f337176a1b4bd9e96a8ebbd36 87 Gene3D G3DSA:3.30.1660.10 21 87 1.8E-24 T 29-03-2018 IPR025543 Dodecin-like AM460_RS07285 1e53a06f337176a1b4bd9e96a8ebbd36 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 2.4E-22 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 Gene3D G3DSA:1.10.10.60 236 285 1.2E-15 T 29-03-2018 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 SMART SM00342 197 280 2.3E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 SUPERFAMILY SSF46689 233 283 1.08E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 Pfam PF12833 Helix-turn-helix domain 204 281 3.5E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.3E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.3E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS12415 1a39f7a51f5c9d8a17d4b9a53557ce4b 285 Gene3D G3DSA:2.60.120.10 47 235 5.2E-14 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS16370 f11f1c5addf6fff4a3cda70723959ef2 196 PIRSF PIRSF030780 1 195 2.0E-126 T 29-03-2018 IPR016956 Inner membrane protein YdjM AM460_RS16370 f11f1c5addf6fff4a3cda70723959ef2 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 2.9E-34 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 Gene3D G3DSA:3.20.19.10 523 753 2.7E-49 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 SUPERFAMILY SSF53732 18 509 4.71E-115 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 Pfam PF00330 Aconitase family (aconitate hydratase) 41 470 1.4E-76 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 SUPERFAMILY SSF52016 511 751 2.16E-34 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 Gene3D G3DSA:3.40.1060.10 185 297 1.7E-25 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 Gene3D G3DSA:3.30.499.10 7 184 3.2E-23 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 Gene3D G3DSA:3.30.499.10 300 520 2.4E-33 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 Pfam PF00694 Aconitase C-terminal domain 636 684 3.5E-6 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 PRINTS PR00415 Aconitase family signature 297 311 5.5E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 PRINTS PR00415 Aconitase family signature 356 367 5.5E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 PRINTS PR00415 Aconitase family signature 140 153 5.5E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 PRINTS PR00415 Aconitase family signature 413 426 5.5E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS22465 25e056b30b2df5f9e847c1478f8b64a5 753 PRINTS PR00415 Aconitase family signature 216 229 5.5E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS04765 f855922871fd02d5d6cca9f9a2f5e146 110 Pfam PF07119 Protein of unknown function (DUF1375) 15 76 3.9E-12 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.8E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.8E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.8E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.8E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.8E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.8E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 SUPERFAMILY SSF51735 3 245 1.88E-75 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 Gene3D G3DSA:3.40.50.720 1 36 2.1E-4 T 29-03-2018 AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 Gene3D G3DSA:3.40.50.720 37 252 1.0E-59 T 29-03-2018 AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 1.6E-59 T 29-03-2018 AM460_RS13690 7fe7cb8d80c239c320e90ec7f4de202c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS00430 79795da25230c9ed943b6a023f82832d 303 Gene3D G3DSA:1.20.5.170 157 275 5.7E-4 T 29-03-2018 AM460_RS06070 523221cc867ee2bd766bb3390d7edbb2 89 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 4.1E-27 T 29-03-2018 IPR009525 Protein of unknown function DUF1145 AM460_RS22735 753b0fd70db6b7058990018f6ede9e17 115 PIRSF PIRSF000169 1 115 1.4E-42 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM460_RS22735 753b0fd70db6b7058990018f6ede9e17 115 Gene3D G3DSA:1.20.1300.10 1 115 6.1E-19 T 29-03-2018 AM460_RS22735 753b0fd70db6b7058990018f6ede9e17 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 2.0E-6 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS22735 753b0fd70db6b7058990018f6ede9e17 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.2E-37 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM460_RS22735 753b0fd70db6b7058990018f6ede9e17 115 SUPERFAMILY SSF81343 5 115 1.96E-31 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS26115 96fe4410181bee3c6484981039b33220 968 SUPERFAMILY SSF52540 480 649 2.72E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS26115 96fe4410181bee3c6484981039b33220 968 SUPERFAMILY SSF52540 273 337 2.72E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS26115 96fe4410181bee3c6484981039b33220 968 Pfam PF00271 Helicase conserved C-terminal domain 495 601 4.1E-16 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS26115 96fe4410181bee3c6484981039b33220 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.478 T 29-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AM460_RS26115 96fe4410181bee3c6484981039b33220 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 9.3E-158 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AM460_RS26115 96fe4410181bee3c6484981039b33220 968 SMART SM00490 517 601 1.7E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS26115 96fe4410181bee3c6484981039b33220 968 SMART SM00487 150 342 1.6E-20 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS26115 96fe4410181bee3c6484981039b33220 968 Gene3D G3DSA:3.40.50.10810 131 362 1.1E-26 T 29-03-2018 AM460_RS26115 96fe4410181bee3c6484981039b33220 968 SUPERFAMILY SSF52540 141 367 1.07E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS26115 96fe4410181bee3c6484981039b33220 968 Gene3D G3DSA:3.40.50.300 481 957 1.3E-23 T 29-03-2018 AM460_RS26115 96fe4410181bee3c6484981039b33220 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 9.2E-19 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AM460_RS17760 dac196f849499539a633eee4e271d8fc 447 SMART SM01150 11 401 1.5E-230 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 AM460_RS17760 dac196f849499539a633eee4e271d8fc 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 7.2E-120 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 SUPERFAMILY SSF52540 268 489 5.62E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 Gene3D G3DSA:3.40.50.300 265 491 2.3E-39 T 29-03-2018 AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 Gene3D G3DSA:3.40.50.300 6 260 1.1E-55 T 29-03-2018 AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 Pfam PF00005 ABC transporter 25 174 3.8E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 Pfam PF00005 ABC transporter 279 430 8.7E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 SMART SM00382 34 222 2.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 SMART SM00382 285 479 0.35 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS01555 8acc039225359fa4dcbd4f5adf1000c4 500 SUPERFAMILY SSF52540 9 232 4.22E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10410 d2693df983652b913a72176ba72c7575 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 110 5.0E-12 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 121 216 3.1E-7 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 Gene3D G3DSA:3.30.420.40 214 469 2.9E-43 T 29-03-2018 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 Gene3D G3DSA:3.30.420.40 115 213 5.1E-16 T 29-03-2018 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 SUPERFAMILY SSF53067 218 455 4.39E-43 T 29-03-2018 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 SUPERFAMILY SSF53067 4 216 5.02E-37 T 29-03-2018 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 Gene3D G3DSA:3.30.420.40 1 114 3.3E-21 T 29-03-2018 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 225 418 1.2E-22 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 PIRSF PIRSF000538 112 471 1.9E-51 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS10410 d2693df983652b913a72176ba72c7575 492 PIRSF PIRSF000538 3 116 1.3E-17 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 Pfam PF00083 Sugar (and other) transporter 26 460 8.0E-133 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 330 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 SUPERFAMILY SSF103473 13 459 1.83E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 362 383 5.3E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 33 43 5.3E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 269 279 5.3E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 385 397 5.3E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 116 135 5.3E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 Gene3D G3DSA:1.20.1250.20 16 216 1.6E-36 T 29-03-2018 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 457 1.2E-149 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09895 5022bb584c60fb95ecf25667ee394d68 472 Gene3D G3DSA:1.20.1250.20 226 471 3.2E-34 T 29-03-2018 AM460_RS18030 634d4f075a11179811fc78bbb4d1db10 465 PIRSF PIRSF019381 1 465 3.0E-216 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM460_RS18030 634d4f075a11179811fc78bbb4d1db10 465 Gene3D G3DSA:3.40.50.300 14 395 6.4E-15 T 29-03-2018 AM460_RS18030 634d4f075a11179811fc78bbb4d1db10 465 Pfam PF04317 YcjX-like family, DUF463 20 464 1.1E-182 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM460_RS04605 447a096ddd203f40716dc801de81f5b5 240 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 15 220 2.3E-15 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM460_RS04605 447a096ddd203f40716dc801de81f5b5 240 Gene3D G3DSA:3.40.50.1360 1 239 7.9E-49 T 29-03-2018 AM460_RS04605 447a096ddd203f40716dc801de81f5b5 240 SUPERFAMILY SSF100950 1 237 7.85E-56 T 29-03-2018 AM460_RS04605 447a096ddd203f40716dc801de81f5b5 240 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM460_RS16500 1c724290a5d25581d769752dcdd74928 63 Gene3D G3DSA:2.10.70.10 27 63 1.9E-15 T 29-03-2018 AM460_RS16500 1c724290a5d25581d769752dcdd74928 63 Pfam PF10636 Hemin uptake protein hemP 27 63 6.4E-15 T 29-03-2018 IPR019600 Hemin uptake protein HemP AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Gene3D G3DSA:3.30.70.20 8 42 0.0046 T 29-03-2018 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Gene3D G3DSA:3.30.70.20 114 152 1.1E-16 T 29-03-2018 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 3.3E-20 T 29-03-2018 IPR015246 Formate dehydrogenase, transmembrane AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 SUPERFAMILY SSF54862 26 262 5.02E-72 T 29-03-2018 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Gene3D G3DSA:3.30.70.20 43 113 9.2E-21 T 29-03-2018 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Pfam PF12800 4Fe-4S binding domain 38 50 0.11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 PIRSF PIRSF036298 1 294 1.4E-163 T 29-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.1E-25 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Gene3D G3DSA:3.30.70.20 153 255 3.0E-24 T 29-03-2018 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 1.2E-145 T 29-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 Gene3D G3DSA:1.20.5.480 256 291 1.1E-22 T 29-03-2018 AM460_RS17525 523a3e5ea6d2c024dc1ab85344bebc79 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 Pfam PF03466 LysR substrate binding domain 101 304 1.5E-32 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 Gene3D G3DSA:3.40.190.10 188 274 2.7E-12 T 29-03-2018 AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 Gene3D G3DSA:1.10.10.10 6 93 1.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 SUPERFAMILY SSF46785 10 121 7.35E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.0E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 Gene3D G3DSA:3.40.190.10 97 187 1.1E-17 T 29-03-2018 AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 SUPERFAMILY SSF53850 102 305 7.14E-31 T 29-03-2018 AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS17765 80bedfd69c3882c384cbf5057e6b3dcf 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 SUPERFAMILY SSF46609 1 90 1.23E-36 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.7E-33 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.8E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 4.8E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.8E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 4.8E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 4.8E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 SUPERFAMILY SSF54719 95 204 8.38E-45 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 3.7E-40 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 Gene3D G3DSA:1.10.287.990 20 90 6.4E-31 T 29-03-2018 AM460_RS03535 7b30ebcc0ef2dcb6df41132ace50f0ea 206 PIRSF PIRSF000349 1 206 5.7E-80 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM460_RS06105 8af505fb9d55e828a1078e432424a938 88 Gene3D G3DSA:1.20.890.30 52 87 9.4E-14 T 29-03-2018 AM460_RS06105 8af505fb9d55e828a1078e432424a938 88 SUPERFAMILY SSF47598 5 82 2.0E-22 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM460_RS06105 8af505fb9d55e828a1078e432424a938 88 Gene3D G3DSA:1.10.1220.10 5 48 1.9E-16 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS06105 8af505fb9d55e828a1078e432424a938 88 Pfam PF08681 Protein of unknown function (DUF1778) 8 86 2.7E-26 T 29-03-2018 IPR014795 Vibrio phage ICP1, Orf50 AM460_RS27890 05aa61d9aa02fee07ee7c58f8878cbff 234 Pfam PF13610 DDE domain 75 212 1.8E-49 T 29-03-2018 IPR032874 DDE domain AM460_RS27890 05aa61d9aa02fee07ee7c58f8878cbff 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27890 05aa61d9aa02fee07ee7c58f8878cbff 234 Gene3D G3DSA:3.30.420.10 72 210 6.4E-13 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS27890 05aa61d9aa02fee07ee7c58f8878cbff 234 SUPERFAMILY SSF53098 75 191 1.52E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS27800 05aa61d9aa02fee07ee7c58f8878cbff 234 Pfam PF13610 DDE domain 75 212 1.8E-49 T 29-03-2018 IPR032874 DDE domain AM460_RS27800 05aa61d9aa02fee07ee7c58f8878cbff 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27800 05aa61d9aa02fee07ee7c58f8878cbff 234 Gene3D G3DSA:3.30.420.10 72 210 6.4E-13 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS27800 05aa61d9aa02fee07ee7c58f8878cbff 234 SUPERFAMILY SSF53098 75 191 1.52E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS23450 4cbece46f460ad93ab23ebb7a033ea71 330 SUPERFAMILY SSF81345 3 325 4.32E-72 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS23450 4cbece46f460ad93ab23ebb7a033ea71 330 Gene3D G3DSA:1.10.3470.10 3 330 7.9E-64 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS23450 4cbece46f460ad93ab23ebb7a033ea71 330 Pfam PF01032 FecCD transport family 20 324 3.8E-84 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS15775 eda5dee7e7f56e3874c10c3ee4dcad95 124 SUPERFAMILY SSF81296 26 124 3.29E-27 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS15775 eda5dee7e7f56e3874c10c3ee4dcad95 124 Gene3D G3DSA:2.60.40.1220 26 124 2.8E-31 T 29-03-2018 AM460_RS15775 eda5dee7e7f56e3874c10c3ee4dcad95 124 Pfam PF04234 CopC domain 27 123 2.6E-27 T 29-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AM460_RS05840 4213311d24e3fe2a9cbe201af7ad0320 342 Gene3D G3DSA:3.40.1570.10 182 339 3.2E-54 T 29-03-2018 AM460_RS05840 4213311d24e3fe2a9cbe201af7ad0320 342 Gene3D G3DSA:3.40.1570.10 1 178 2.8E-52 T 29-03-2018 AM460_RS05840 4213311d24e3fe2a9cbe201af7ad0320 342 SUPERFAMILY SSF144064 2 336 9.81E-132 T 29-03-2018 AM460_RS05840 4213311d24e3fe2a9cbe201af7ad0320 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 27 155 1.2E-41 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM460_RS05840 4213311d24e3fe2a9cbe201af7ad0320 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 204 335 1.5E-41 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM460_RS13575 ab0a1fe4f53eac24fe4d3beb97b3a8c8 663 SUPERFAMILY SSF56935 29 663 2.56E-129 T 29-03-2018 AM460_RS13575 ab0a1fe4f53eac24fe4d3beb97b3a8c8 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 152 6.5E-33 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS13575 ab0a1fe4f53eac24fe4d3beb97b3a8c8 663 Gene3D G3DSA:2.170.130.10 25 159 1.1E-40 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS13575 ab0a1fe4f53eac24fe4d3beb97b3a8c8 663 Pfam PF00593 TonB dependent receptor 219 662 1.1E-62 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS13575 ab0a1fe4f53eac24fe4d3beb97b3a8c8 663 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 646 663 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM460_RS13575 ab0a1fe4f53eac24fe4d3beb97b3a8c8 663 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS13575 ab0a1fe4f53eac24fe4d3beb97b3a8c8 663 Gene3D G3DSA:2.40.170.20 163 663 2.1E-85 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS24965 a3ad26fa8d9a48c5ff24d165c6e973c5 841 Gene3D G3DSA:2.60.40.1120 749 817 0.0052 T 29-03-2018 AM460_RS24965 a3ad26fa8d9a48c5ff24d165c6e973c5 841 Pfam PF16967 E-set like domain 283 350 5.3E-25 T 29-03-2018 IPR032636 Pilus assembly protein, E-set like domain AM460_RS24965 a3ad26fa8d9a48c5ff24d165c6e973c5 841 SUPERFAMILY SSF49464 749 810 1.96E-5 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain AM460_RS24965 a3ad26fa8d9a48c5ff24d165c6e973c5 841 Pfam PF15976 CS1-pili formation C-terminal 732 824 2.6E-28 T 29-03-2018 IPR031917 Pilus assembly protein, C-terminal domain AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 69 335 1.9E-102 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 PIRSF PIRSF004692 17 339 5.7E-130 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 SUPERFAMILY SSF53697 35 308 3.78E-62 T 29-03-2018 AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 Pfam PF01380 SIS domain 66 196 2.1E-33 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 Gene3D G3DSA:3.10.580.10 223 339 7.7E-22 T 29-03-2018 AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 Gene3D G3DSA:3.40.50.10490 29 222 5.6E-54 T 29-03-2018 AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 Pfam PF00571 CBS domain 291 336 2.1E-7 T 29-03-2018 IPR000644 CBS domain AM460_RS08795 286d8c6b960b4c4cb02d79758d9c44be 339 Pfam PF00571 CBS domain 225 279 3.5E-7 T 29-03-2018 IPR000644 CBS domain AM460_RS03905 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 SUPERFAMILY SSF56112 94 159 3.27E-49 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS03905 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 SUPERFAMILY SSF56112 194 438 3.27E-49 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS03905 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.997 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM460_RS03905 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Gene3D G3DSA:3.30.200.20 103 245 4.7E-18 T 29-03-2018 AM460_RS03905 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Pfam PF03109 ABC1 family 116 232 1.3E-34 T 29-03-2018 IPR004147 UbiB domain AM460_RS03905 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 446 2.0E-187 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM460_RS06640 4a0cd69cdb28c1eb6dfb91d85f153dc9 340 SUPERFAMILY SSF53474 36 312 2.91E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS06640 4a0cd69cdb28c1eb6dfb91d85f153dc9 340 Gene3D G3DSA:3.40.50.1820 44 335 1.2E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS06640 4a0cd69cdb28c1eb6dfb91d85f153dc9 340 PIRSF PIRSF005211 5 340 1.1E-110 T 29-03-2018 IPR012020 AB hydrolase 4 family AM460_RS06640 4a0cd69cdb28c1eb6dfb91d85f153dc9 340 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 239 280 - T 29-03-2018 IPR000952 AB hydrolase 4, conserved site AM460_RS06640 4a0cd69cdb28c1eb6dfb91d85f153dc9 340 Pfam PF00561 alpha/beta hydrolase fold 73 312 3.6E-30 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM460_RS26975 8093c368e93fa6b743c377bf7c22da9d 115 Pfam PF03526 Colicin E1 (microcin) immunity protein 44 81 4.8E-8 T 29-03-2018 IPR003061 Colicin E1 (microcin) immunity protein GO:0015643|GO:0030153 AM460_RS24690 05e8199239b55a74d711e28ac405f1c8 460 Gene3D G3DSA:3.20.20.140 132 403 8.3E-29 T 29-03-2018 AM460_RS24690 05e8199239b55a74d711e28ac405f1c8 460 SUPERFAMILY SSF51556 118 411 1.7E-73 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS24690 05e8199239b55a74d711e28ac405f1c8 460 SUPERFAMILY SSF51338 80 124 2.36E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS24690 05e8199239b55a74d711e28ac405f1c8 460 Gene3D G3DSA:2.30.40.10 419 458 0.22 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS24690 05e8199239b55a74d711e28ac405f1c8 460 Gene3D G3DSA:2.30.40.10 59 131 6.5E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS24690 05e8199239b55a74d711e28ac405f1c8 460 Pfam PF07969 Amidohydrolase family 167 431 2.2E-10 T 29-03-2018 IPR013108 Amidohydrolase 3 AM460_RS18040 842e21448aba67d9f2e097e75b3fd69a 301 SUPERFAMILY SSF56935 247 301 8.42E-7 T 29-03-2018 AM460_RS18040 842e21448aba67d9f2e097e75b3fd69a 301 SUPERFAMILY SSF56935 47 201 8.42E-7 T 29-03-2018 AM460_RS18040 842e21448aba67d9f2e097e75b3fd69a 301 Pfam PF09381 Outer membrane protein G (OmpG) 1 301 2.9E-217 T 29-03-2018 IPR018981 Outer membrane protein G AM460_RS18040 842e21448aba67d9f2e097e75b3fd69a 301 Gene3D G3DSA:2.40.160.40 22 301 1.3E-66 T 29-03-2018 AM460_RS11415 93ae275093e279946424f51b93c9b595 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 3.8E-82 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM460_RS11415 93ae275093e279946424f51b93c9b595 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.3E-80 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM460_RS11415 93ae275093e279946424f51b93c9b595 243 SUPERFAMILY SSF64438 4 242 2.93E-89 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM460_RS11415 93ae275093e279946424f51b93c9b595 243 Gene3D G3DSA:3.60.140.10 1 243 9.6E-96 T 29-03-2018 AM460_RS00490 88da3bf7f81bca0dee44fbea8033eb92 132 Pfam PF08765 Mor transcription activator family 9 116 1.2E-43 T 29-03-2018 IPR014875 Mor transcription activator AM460_RS00490 88da3bf7f81bca0dee44fbea8033eb92 132 SUPERFAMILY SSF46689 12 107 7.97E-27 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS00490 88da3bf7f81bca0dee44fbea8033eb92 132 Gene3D G3DSA:1.10.10.60 62 116 7.5E-19 T 29-03-2018 AM460_RS04835 8ef52e4ae7b1adaf3a97b79e67a3d302 96 Pfam PF01842 ACT domain 10 73 5.5E-10 T 29-03-2018 IPR002912 ACT domain AM460_RS04835 8ef52e4ae7b1adaf3a97b79e67a3d302 96 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 15 78 2.0E-14 T 29-03-2018 AM460_RS04835 8ef52e4ae7b1adaf3a97b79e67a3d302 96 Gene3D G3DSA:3.30.70.260 1 96 6.1E-21 T 29-03-2018 AM460_RS04835 8ef52e4ae7b1adaf3a97b79e67a3d302 96 SUPERFAMILY SSF55021 9 80 3.86E-16 T 29-03-2018 AM460_RS27710 2c89b9929e4a9fb326182ca026a1426b 268 Pfam PF00589 Phage integrase family 50 241 2.9E-44 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS27710 2c89b9929e4a9fb326182ca026a1426b 268 SUPERFAMILY SSF56349 48 242 5.3E-27 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS27710 2c89b9929e4a9fb326182ca026a1426b 268 Gene3D G3DSA:1.10.443.10 46 258 1.5E-27 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS27710 2c89b9929e4a9fb326182ca026a1426b 268 PIRSF PIRSF004576 1 266 4.6E-119 T 29-03-2018 IPR016423 Resolvase, Rsv AM460_RS03845 a7c80d38d9cb05f56091814e11c040a2 483 PIRSF PIRSF006247 1 483 2.3E-185 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM460_RS03845 a7c80d38d9cb05f56091814e11c040a2 483 Pfam PF02386 Cation transport protein 37 477 3.1E-92 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM460_RS03845 a7c80d38d9cb05f56091814e11c040a2 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 9.5E-129 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM460_RS18755 beb873568a9148ffe1d6fa1d6217142b 82 Pfam PF07825 Excisionase-like protein 6 74 8.5E-8 T 29-03-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM460_RS18755 beb873568a9148ffe1d6fa1d6217142b 82 Gene3D G3DSA:1.10.1660.20 5 76 9.2E-25 T 29-03-2018 AM460_RS18755 beb873568a9148ffe1d6fa1d6217142b 82 SUPERFAMILY SSF46955 4 78 4.58E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS06015 35e173d071fe7b3a1f9fcc71f85b73bd 314 SUPERFAMILY SSF161098 94 308 1.2E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06015 35e173d071fe7b3a1f9fcc71f85b73bd 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 1.1E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06015 35e173d071fe7b3a1f9fcc71f85b73bd 314 Gene3D G3DSA:1.10.3720.10 2 296 2.9E-43 T 29-03-2018 AM460_RS06015 35e173d071fe7b3a1f9fcc71f85b73bd 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 314 3.0E-170 T 29-03-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 AM460_RS18930 0fd04fdf69c234bdd2b13ff1e423ff4d 335 Gene3D G3DSA:3.40.47.10 172 334 1.9E-27 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS18930 0fd04fdf69c234bdd2b13ff1e423ff4d 335 Gene3D G3DSA:3.40.47.10 12 171 3.0E-23 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS18930 0fd04fdf69c234bdd2b13ff1e423ff4d 335 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 246 333 6.0E-22 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM460_RS18930 0fd04fdf69c234bdd2b13ff1e423ff4d 335 SUPERFAMILY SSF53901 12 333 9.33E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS18930 0fd04fdf69c234bdd2b13ff1e423ff4d 335 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 190 2.9E-20 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 Gene3D G3DSA:3.40.50.720 1 180 1.3E-34 T 29-03-2018 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 SMART SM01350 179 467 4.7E-222 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 Gene3D G3DSA:1.10.1040.10 181 434 5.9E-112 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 SUPERFAMILY SSF51735 4 173 4.86E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 3.2E-134 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 Gene3D G3DSA:1.20.5.320 435 468 3.8E-21 T 29-03-2018 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 SUPERFAMILY SSF48179 177 467 2.38E-131 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 29-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 PIRSF PIRSF000109 1 468 1.4E-243 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 1.2E-232 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM460_RS14130 0dae97e70d34445efab7281c05bdfd1d 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 3.3E-51 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM460_RS27500 45c618bb197ec02cf03364c1d347aacb 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 5.2E-66 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 AM460_RS27500 45c618bb197ec02cf03364c1d347aacb 188 Pfam PF05309 TraE protein 1 182 2.1E-58 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 AM460_RS25550 f3c762d0006d84ebbe048bdc165230c7 265 Gene3D G3DSA:3.40.50.300 1 243 4.6E-62 T 29-03-2018 AM460_RS25550 f3c762d0006d84ebbe048bdc165230c7 265 SMART SM00382 36 224 2.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS25550 f3c762d0006d84ebbe048bdc165230c7 265 SUPERFAMILY SSF52540 13 238 3.59E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25550 f3c762d0006d84ebbe048bdc165230c7 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS25550 f3c762d0006d84ebbe048bdc165230c7 265 Pfam PF00005 ABC transporter 27 176 5.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS19005 d63d61068f94d5289d7c8b5c6079f26a 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 50.268 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS19005 d63d61068f94d5289d7c8b5c6079f26a 284 Gene3D G3DSA:3.20.20.70 17 280 2.7E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS19005 d63d61068f94d5289d7c8b5c6079f26a 284 SUPERFAMILY SSF51569 3 278 1.1E-103 T 29-03-2018 AM460_RS19005 d63d61068f94d5289d7c8b5c6079f26a 284 Pfam PF00793 DAHP synthetase I family 10 274 2.1E-68 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS19005 d63d61068f94d5289d7c8b5c6079f26a 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.0E-118 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS23490 55a1c89ba85d93f48f525ece54df2b8e 219 Gene3D G3DSA:3.90.470.20 114 214 9.7E-9 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS23490 55a1c89ba85d93f48f525ece54df2b8e 219 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 103 182 1.4E-10 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS23490 55a1c89ba85d93f48f525ece54df2b8e 219 Gene3D G3DSA:3.90.470.20 23 113 5.0E-15 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS23490 55a1c89ba85d93f48f525ece54df2b8e 219 PRINTS PR01399 Enterobactin synthetase component D signature 73 91 6.0E-22 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM460_RS23490 55a1c89ba85d93f48f525ece54df2b8e 219 PRINTS PR01399 Enterobactin synthetase component D signature 146 162 6.0E-22 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM460_RS23490 55a1c89ba85d93f48f525ece54df2b8e 219 PRINTS PR01399 Enterobactin synthetase component D signature 44 64 6.0E-22 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM460_RS23490 55a1c89ba85d93f48f525ece54df2b8e 219 SUPERFAMILY SSF56214 102 206 3.84E-13 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS02460 aae0183839e1bc31c1c0f4ae1e7130b2 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 2.9E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02460 aae0183839e1bc31c1c0f4ae1e7130b2 349 SUPERFAMILY SSF161098 105 174 1.31E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02460 aae0183839e1bc31c1c0f4ae1e7130b2 349 SUPERFAMILY SSF161098 213 334 1.31E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02460 aae0183839e1bc31c1c0f4ae1e7130b2 349 Gene3D G3DSA:1.10.3720.10 6 338 4.1E-44 T 29-03-2018 AM460_RS07995 8e744d7116c358fb163f8d87ca48cd33 183 Pfam PF10688 Bacterial inner membrane protein 5 163 2.8E-57 T 29-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AM460_RS07995 8e744d7116c358fb163f8d87ca48cd33 183 PIRSF PIRSF011443 1 182 6.1E-70 T 29-03-2018 IPR026267 Inner membrane protein YgjV AM460_RS02825 6888883acf8042d804cb17466def1d87 514 SUPERFAMILY SSF161098 261 503 1.23E-60 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02825 6888883acf8042d804cb17466def1d87 514 SUPERFAMILY SSF160964 15 260 9.15E-90 T 29-03-2018 AM460_RS02825 6888883acf8042d804cb17466def1d87 514 Gene3D G3DSA:1.10.3720.10 270 514 3.5E-43 T 29-03-2018 AM460_RS02825 6888883acf8042d804cb17466def1d87 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 501 4.2E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02825 6888883acf8042d804cb17466def1d87 514 Gene3D G3DSA:1.20.58.370 4 95 2.1E-32 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AM460_RS02825 6888883acf8042d804cb17466def1d87 514 Gene3D G3DSA:2.40.430.10 119 197 9.4E-31 T 29-03-2018 AM460_RS02825 6888883acf8042d804cb17466def1d87 514 Gene3D G3DSA:3.10.650.10 198 269 9.2E-28 T 29-03-2018 AM460_RS02825 6888883acf8042d804cb17466def1d87 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 2.4E-58 T 29-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AM460_RS13140 d7554b3557836606cd6d719af3ee5356 216 PIRSF PIRSF026326 1 216 2.6E-62 T 29-03-2018 IPR027023 Putative lipopolysaccharide kinase InaA AM460_RS13140 d7554b3557836606cd6d719af3ee5356 216 Gene3D G3DSA:1.10.510.10 17 204 7.7E-4 T 29-03-2018 AM460_RS13140 d7554b3557836606cd6d719af3ee5356 216 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 11 213 5.5E-72 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AM460_RS13140 d7554b3557836606cd6d719af3ee5356 216 SUPERFAMILY SSF56112 37 179 3.31E-7 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS27525 18a8f0f2ce0ed27818ba45cf131f1205 127 SUPERFAMILY SSF140581 60 126 2.35E-28 T 29-03-2018 AM460_RS27525 18a8f0f2ce0ed27818ba45cf131f1205 127 Pfam PF05261 TraM protein, DNA-binding 1 126 1.2E-58 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 AM460_RS27525 18a8f0f2ce0ed27818ba45cf131f1205 127 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 126 5.0E-66 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 AM460_RS27525 18a8f0f2ce0ed27818ba45cf131f1205 127 Gene3D G3DSA:1.10.10.450 3 56 1.8E-26 T 29-03-2018 AM460_RS27525 18a8f0f2ce0ed27818ba45cf131f1205 127 SUPERFAMILY SSF47729 2 56 5.18E-23 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM460_RS09985 13fbc3e9b854bf501eabd10aef88724f 107 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 8.4E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS09985 13fbc3e9b854bf501eabd10aef88724f 107 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 9.3E-25 T 29-03-2018 IPR022204 Prepilin peptidase dependent protein C AM460_RS09985 13fbc3e9b854bf501eabd10aef88724f 107 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.4E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS09985 13fbc3e9b854bf501eabd10aef88724f 107 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS05885 e2a5535aad8e45f42693c7c4157bcbd3 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 4.6E-119 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM460_RS05885 e2a5535aad8e45f42693c7c4157bcbd3 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.934 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM460_RS05885 e2a5535aad8e45f42693c7c4157bcbd3 280 SUPERFAMILY SSF53335 9 279 1.94E-100 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS05885 e2a5535aad8e45f42693c7c4157bcbd3 280 Gene3D G3DSA:3.40.50.150 1 280 6.4E-93 T 29-03-2018 AM460_RS05885 e2a5535aad8e45f42693c7c4157bcbd3 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS26045 0651ad3718bd99c4a7e500ea7888f48d 327 Gene3D G3DSA:3.40.190.10 135 275 3.4E-31 T 29-03-2018 AM460_RS26045 0651ad3718bd99c4a7e500ea7888f48d 327 Gene3D G3DSA:3.40.190.10 17 134 2.2E-4 T 29-03-2018 AM460_RS26045 0651ad3718bd99c4a7e500ea7888f48d 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 289 2.7E-17 T 29-03-2018 AM460_RS26045 0651ad3718bd99c4a7e500ea7888f48d 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AM460_RS26045 0651ad3718bd99c4a7e500ea7888f48d 327 SUPERFAMILY SSF53850 22 323 1.97E-63 T 29-03-2018 AM460_RS26045 0651ad3718bd99c4a7e500ea7888f48d 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 9.4E-156 T 29-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 AM460_RS26045 0651ad3718bd99c4a7e500ea7888f48d 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 327 5.4E-193 T 29-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AM460_RS26900 2745b7ae183650e6ca36a1fe90fb28ff 145 SUPERFAMILY SSF51306 21 139 6.54E-31 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS26900 2745b7ae183650e6ca36a1fe90fb28ff 145 Pfam PF00717 Peptidase S24-like 61 108 3.2E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS26900 2745b7ae183650e6ca36a1fe90fb28ff 145 Gene3D G3DSA:2.10.109.10 24 141 1.3E-23 T 29-03-2018 AM460_RS26900 2745b7ae183650e6ca36a1fe90fb28ff 145 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 67 78 4.8E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS26900 2745b7ae183650e6ca36a1fe90fb28ff 145 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 95 107 4.8E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS26900 2745b7ae183650e6ca36a1fe90fb28ff 145 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 56 66 4.8E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM460_RS14100 474c67e2528f0082264c66e856da2b30 321 Pfam PF00535 Glycosyl transferase family 2 15 208 2.5E-16 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS14100 474c67e2528f0082264c66e856da2b30 321 SUPERFAMILY SSF53448 1 288 9.19E-43 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS14100 474c67e2528f0082264c66e856da2b30 321 Gene3D G3DSA:3.90.550.10 1 266 4.7E-37 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS21865 8cc2feb7dd50f76899c363c50b5fd8c7 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 231 3.1E-95 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM460_RS21865 8cc2feb7dd50f76899c363c50b5fd8c7 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 97.147 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM460_RS21865 8cc2feb7dd50f76899c363c50b5fd8c7 234 SUPERFAMILY SSF55729 2 228 5.61E-94 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS21865 8cc2feb7dd50f76899c363c50b5fd8c7 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 1.1E-70 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SUPERFAMILY SSF48008 87 216 4.18E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Gene3D G3DSA:1.10.10.10 1 71 1.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Gene3D G3DSA:1.20.120.530 72 228 1.2E-29 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SUPERFAMILY SSF46785 7 104 7.69E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SMART SM00895 85 209 2.4E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 3.0E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Pfam PF07729 FCD domain 89 208 9.8E-26 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.0E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.0E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS17225 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SMART SM00345 17 75 2.6E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS20670 4b73d1959964b241742a6f0a871a101d 597 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 573 582 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AM460_RS20670 4b73d1959964b241742a6f0a871a101d 597 SUPERFAMILY SSF56762 12 582 8.37E-167 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS20670 4b73d1959964b241742a6f0a871a101d 597 Gene3D G3DSA:1.10.645.10 13 582 2.7E-193 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS20670 4b73d1959964b241742a6f0a871a101d 597 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 54 79 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AM460_RS20670 4b73d1959964b241742a6f0a871a101d 597 Pfam PF00374 Nickel-dependent hydrogenase 54 582 4.6E-220 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AM460_RS10605 1023c3386a27063f58b535146e4814d4 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 8.0E-52 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA AM460_RS10605 1023c3386a27063f58b535146e4814d4 114 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 2.0E-39 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA AM460_RS10045 cfe39cdb865a5338f5a9bf9cb2c4326b 458 Pfam PF12486 Type VI secretion system, EvfB, or VasL 306 448 1.9E-42 T 29-03-2018 IPR021069 ImpA, C-terminal AM460_RS10045 cfe39cdb865a5338f5a9bf9cb2c4326b 458 Pfam PF06812 ImpA, N-terminal, type VI secretion system 25 112 2.6E-12 T 29-03-2018 IPR010657 ImpA, N-terminal AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.5E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF47384 269 347 3.92E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00091 155 221 4.3E-7 T 29-03-2018 IPR000014 PAS domain AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 4.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:3.40.50.2300 514 645 8.1E-31 T 29-03-2018 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:1.20.120.160 646 763 3.6E-16 T 29-03-2018 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00387 394 507 2.0E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF01627 Hpt domain 686 760 1.7E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF00072 Response regulator receiver domain 528 639 5.9E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 PIRSF PIRSF003182 1 778 0.0 T 29-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF55785 140 267 3.49E-20 T 29-03-2018 IPR000014 PAS domain AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF00989 PAS fold 156 266 1.1E-17 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 2.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 2.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 2.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 2.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF52172 526 647 1.99E-27 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:3.30.565.10 342 507 3.6E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00448 526 639 7.9E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:1.10.287.970 3 88 3.1E-39 T 29-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00073 675 772 4.0E-23 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:1.10.287.130 280 341 1.6E-17 T 29-03-2018 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF47226 661 773 2.09E-27 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:3.30.450.20 103 279 3.2E-24 T 29-03-2018 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00388 282 347 5.6E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.5E-13 T 29-03-2018 IPR000014 PAS domain AM460_RS07400 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF55874 336 503 3.41E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.7E-39 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 PIRSF PIRSF000441 75 266 5.7E-61 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 Gene3D G3DSA:2.160.10.10 136 269 1.1E-29 T 29-03-2018 AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 Gene3D G3DSA:1.10.3130.10 1 135 1.6E-39 T 29-03-2018 AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 SMART SM00971 9 113 3.2E-65 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.5E-75 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM460_RS05215 dbf5255db46feff6ef72b63754671791 273 SUPERFAMILY SSF51161 5 260 2.63E-68 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS08195 a4469d97daf4dfb8f1e38609998efdf4 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.781 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM460_RS08195 a4469d97daf4dfb8f1e38609998efdf4 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 3.2E-110 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM460_RS08195 a4469d97daf4dfb8f1e38609998efdf4 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.6E-89 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM460_RS21960 8509567ff56460550a5779280f4c5d2b 337 SUPERFAMILY SSF51735 298 335 7.85E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS21960 8509567ff56460550a5779280f4c5d2b 337 SUPERFAMILY SSF51735 1 270 7.85E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS21960 8509567ff56460550a5779280f4c5d2b 337 Gene3D G3DSA:3.90.25.10 181 335 2.9E-26 T 29-03-2018 AM460_RS21960 8509567ff56460550a5779280f4c5d2b 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 234 1.1E-26 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM460_RS21960 8509567ff56460550a5779280f4c5d2b 337 Gene3D G3DSA:3.40.50.720 1 180 2.9E-26 T 29-03-2018 AM460_RS18505 918c94dd9339a03601da76000acd912b 238 SMART SM00409 154 234 4.8E-5 T 29-03-2018 IPR003599 Immunoglobulin subtype AM460_RS18505 918c94dd9339a03601da76000acd912b 238 Gene3D G3DSA:2.60.40.10 148 202 4.6E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS18505 918c94dd9339a03601da76000acd912b 238 SUPERFAMILY SSF48726 155 233 4.83E-12 T 29-03-2018 IPR007110 Immunoglobulin-like domain AM460_RS18505 918c94dd9339a03601da76000acd912b 238 Pfam PF13927 Immunoglobulin domain 157 215 2.5E-8 T 29-03-2018 AM460_RS18505 918c94dd9339a03601da76000acd912b 238 Gene3D G3DSA:2.60.40.10 203 233 8.0E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS27725 09c671b16f4d5e36c1b5c2fe171a298d 331 Gene3D G3DSA:1.10.1410.20 185 272 0.0048 T 29-03-2018 AM460_RS27725 09c671b16f4d5e36c1b5c2fe171a298d 331 Gene3D G3DSA:3.30.460.10 20 184 5.6E-16 T 29-03-2018 AM460_RS14735 0cd1e0367adeb3db5442ac4cbb06d631 426 SUPERFAMILY SSF103473 4 414 2.22E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS14735 0cd1e0367adeb3db5442ac4cbb06d631 426 Gene3D G3DSA:1.20.1250.20 224 422 8.1E-14 T 29-03-2018 AM460_RS14735 0cd1e0367adeb3db5442ac4cbb06d631 426 Pfam PF07690 Major Facilitator Superfamily 25 365 7.4E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS14735 0cd1e0367adeb3db5442ac4cbb06d631 426 Gene3D G3DSA:1.20.1250.20 9 218 4.3E-8 T 29-03-2018 AM460_RS15325 2e49414598909bf4e6357dd60471c244 524 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 28 508 2.0E-135 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AM460_RS15325 2e49414598909bf4e6357dd60471c244 524 Pfam PF05136 Phage portal protein, lambda family 31 398 9.4E-89 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.941 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.9E-19 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 PIRSF PIRSF000190 1 218 3.1E-87 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 122 5.8E-25 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 Gene3D G3DSA:2.30.110.10 17 218 2.3E-70 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 2.6E-105 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM460_RS16875 703f9b9778717f8100d9df88d0cc741a 218 SUPERFAMILY SSF50475 21 218 3.55E-68 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS23270 4c42f35a6c6981c9f971c85d208e6975 186 Gene3D G3DSA:2.40.160.20 29 186 7.8E-67 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS23270 4c42f35a6c6981c9f971c85d208e6975 186 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 37 183 8.4E-67 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM460_RS23270 4c42f35a6c6981c9f971c85d208e6975 186 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 186 43.38 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM460_RS23270 4c42f35a6c6981c9f971c85d208e6975 186 SUPERFAMILY SSF56925 26 186 7.45E-83 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS23270 4c42f35a6c6981c9f971c85d208e6975 186 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 33 174 1.0E-80 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM460_RS17095 ba3dc74f48fa2edfcfa472ce207310d8 109 SUPERFAMILY SSF103481 12 108 2.09E-17 T 29-03-2018 AM460_RS17095 ba3dc74f48fa2edfcfa472ce207310d8 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 34.9 T 29-03-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 AM460_RS17095 ba3dc74f48fa2edfcfa472ce207310d8 109 Pfam PF00893 Small Multidrug Resistance protein 6 99 4.1E-29 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM460_RS26075 01dc1bdb5eea148f1beb9ca5e0d3ce5e 317 Gene3D G3DSA:3.40.190.10 30 159 0.61 T 29-03-2018 AM460_RS26075 01dc1bdb5eea148f1beb9ca5e0d3ce5e 317 SUPERFAMILY SSF53850 25 274 7.24E-10 T 29-03-2018 AM460_RS26075 01dc1bdb5eea148f1beb9ca5e0d3ce5e 317 Gene3D G3DSA:3.40.190.10 160 292 3.0E-11 T 29-03-2018 AM460_RS26075 01dc1bdb5eea148f1beb9ca5e0d3ce5e 317 PIRSF PIRSF017082 1 317 2.7E-70 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM460_RS26075 01dc1bdb5eea148f1beb9ca5e0d3ce5e 317 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 43 315 6.3E-44 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 26.267 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 SUPERFAMILY SSF52540 214 440 1.8E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 SUPERFAMILY SSF52540 503 601 1.8E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 SMART SM00490 492 589 5.3E-10 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 Gene3D G3DSA:3.40.50.300 196 361 1.9E-27 T 29-03-2018 AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 9.8E-220 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 SMART SM00487 195 391 3.2E-20 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 1.6E-5 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 Pfam PF00270 DEAD/DEAH box helicase 203 362 6.5E-16 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS03400 eab15a8007740a6293eaccc8f5c3848e 732 Gene3D G3DSA:3.40.50.300 396 620 3.1E-22 T 29-03-2018 AM460_RS12680 173e7a05f33e34e22f1201d66fde48fd 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.647 T 29-03-2018 IPR022990 Uncharacterised protein family UPF0115 AM460_RS12680 173e7a05f33e34e22f1201d66fde48fd 183 Pfam PF01713 Smr domain 98 172 1.5E-17 T 29-03-2018 IPR002625 Smr domain AM460_RS12680 173e7a05f33e34e22f1201d66fde48fd 183 SMART SM00463 95 173 7.9E-23 T 29-03-2018 IPR002625 Smr domain AM460_RS12680 173e7a05f33e34e22f1201d66fde48fd 183 SUPERFAMILY SSF160443 96 170 2.22E-9 T 29-03-2018 IPR002625 Smr domain AM460_RS21355 33a82c35fb366cfba2e3bf2bc4af73d9 192 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 72 191 7.1E-37 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS17700 98e97228c8b58fd9ce84838db25fcfbe 653 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM460_RS17700 98e97228c8b58fd9ce84838db25fcfbe 653 Pfam PF01136 Peptidase family U32 79 305 2.3E-71 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM460_RS17700 98e97228c8b58fd9ce84838db25fcfbe 653 Pfam PF12392 Collagenase 391 505 1.6E-18 T 29-03-2018 IPR020988 Peptidase U32, collagenase AM460_RS17700 98e97228c8b58fd9ce84838db25fcfbe 653 Gene3D G3DSA:3.20.20.70 6 171 2.1E-8 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 143 191 4.1E-8 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 323 385 4.7E-19 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 253 293 9.2E-9 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 396 458 5.5E-13 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Gene3D G3DSA:2.160.20.20 184 615 6.4E-33 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 212 244 4.3E-6 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 164 191 6.9E-5 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 249 282 4.8E-10 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 128 162 2.2E-5 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 338 374 1.4E-10 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Pfam PF13018 Extended Signal Peptide of Type V secretion system 6 28 9.9E-8 T 29-03-2018 IPR024973 ESPR domain AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 SMART SM00869 650 935 3.8E-19 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 SUPERFAMILY SSF51126 144 611 2.26E-36 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 SUPERFAMILY SSF103515 621 948 3.14E-26 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Pfam PF03797 Autotransporter beta-domain 655 924 7.0E-45 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS01030 7869480fe75b478c6ee09ccb181afd34 948 Gene3D G3DSA:2.40.128.130 616 948 6.4E-38 T 29-03-2018 AM460_RS08850 4a61a34e5e2f0a759aebcdceb8cde6cb 148 SUPERFAMILY SSF102712 73 114 6.02E-5 T 29-03-2018 AM460_RS08850 4a61a34e5e2f0a759aebcdceb8cde6cb 148 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 148 3.4E-44 T 29-03-2018 IPR001405 RadC protein AM460_RS08850 4a61a34e5e2f0a759aebcdceb8cde6cb 148 Pfam PF04002 RadC-like JAB domain 28 147 5.7E-44 T 29-03-2018 IPR025657 RadC-like JAB domain AM460_RS08850 4a61a34e5e2f0a759aebcdceb8cde6cb 148 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 97 102 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM460_RS08850 4a61a34e5e2f0a759aebcdceb8cde6cb 148 Gene3D G3DSA:3.40.140.10 25 148 1.6E-48 T 29-03-2018 AM460_RS23355 1a3d18fa4a35b13df73e9a69b4707a58 187 Gene3D G3DSA:3.30.1020.10 154 183 1.6E-9 T 29-03-2018 AM460_RS23355 1a3d18fa4a35b13df73e9a69b4707a58 187 PIRSF PIRSF000239 1 187 9.8E-51 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM460_RS23355 1a3d18fa4a35b13df73e9a69b4707a58 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM460_RS23355 1a3d18fa4a35b13df73e9a69b4707a58 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.7E-103 T 29-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM460_RS23355 1a3d18fa4a35b13df73e9a69b4707a58 187 Gene3D G3DSA:3.40.30.10 5 153 7.5E-32 T 29-03-2018 AM460_RS23355 1a3d18fa4a35b13df73e9a69b4707a58 187 SUPERFAMILY SSF52833 1 186 6.41E-54 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS23355 1a3d18fa4a35b13df73e9a69b4707a58 187 Pfam PF00578 AhpC/TSA family 10 133 6.0E-33 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM460_RS15855 b29e83a0809470c95da18c191903ba6a 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 21.638 T 29-03-2018 IPR020907 PhoP/PhoQ regulator MgrB AM460_RS15855 b29e83a0809470c95da18c191903ba6a 47 Pfam PF13998 MgrB protein 19 47 5.9E-18 T 29-03-2018 IPR020907 PhoP/PhoQ regulator MgrB AM460_RS08245 280c434e28697ffffce7b4560bc6de3f 209 Pfam PF07290 Protein of unknown function (DUF1449) 7 202 9.7E-77 T 29-03-2018 IPR010840 Protein of unknown function DUF1449 AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 SMART SM00965 46 94 4.3E-5 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 Pfam PF00263 Bacterial type II and III secretion system protein 250 409 5.0E-45 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 Pfam PF03958 Bacterial type II/III secretion system short domain 120 179 4.3E-9 T 29-03-2018 IPR005644 NolW-like AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 PRINTS PR01032 Gene IV protein signature 230 253 3.8E-8 T 29-03-2018 AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 PRINTS PR01032 Gene IV protein signature 271 294 3.8E-8 T 29-03-2018 AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 PRINTS PR01032 Gene IV protein signature 337 365 3.8E-8 T 29-03-2018 AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 22 409 4.0E-133 T 29-03-2018 IPR013355 Type IV pilus secretin PilQ AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 392 5.2E-12 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 397 411 5.2E-12 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 246 270 5.2E-12 T 29-03-2018 IPR001775 GspD/PilQ family AM460_RS06470 e1887c7116dddc2ec42234aab69eee28 412 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 355 388 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM460_RS20040 198f40eddb0826c8338818e6353d13e3 213 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 212 1.8E-65 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB AM460_RS20040 198f40eddb0826c8338818e6353d13e3 213 Gene3D G3DSA:3.40.50.10070 94 213 6.2E-13 T 29-03-2018 AM460_RS20040 198f40eddb0826c8338818e6353d13e3 213 Pfam PF13036 Peptidoglycan-synthase activator LpoB 73 209 3.3E-37 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB AM460_RS20040 198f40eddb0826c8338818e6353d13e3 213 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 211 34.993 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB AM460_RS27585 267c811b077625d2119ccc92ab531eeb 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 8 77 3.0E-36 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS27585 267c811b077625d2119ccc92ab531eeb 77 Gene3D G3DSA:3.30.160.130 9 77 1.7E-37 T 29-03-2018 AM460_RS27585 267c811b077625d2119ccc92ab531eeb 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 10 76 9.4E-33 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS27585 267c811b077625d2119ccc92ab531eeb 77 SUPERFAMILY SSF54786 14 77 3.1E-27 T 29-03-2018 AM460_RS19360 d3abc3aa651e346116d83b429bc53455 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.803 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB AM460_RS19360 d3abc3aa651e346116d83b429bc53455 176 Gene3D G3DSA:1.20.1550.10 1 176 9.7E-55 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM460_RS19360 d3abc3aa651e346116d83b429bc53455 176 SUPERFAMILY SSF158442 15 160 6.67E-46 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM460_RS19360 d3abc3aa651e346116d83b429bc53455 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 1.9E-45 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM460_RS07470 f9477b20d5bbd30265174e187ea63807 325 Pfam PF01699 Sodium/calcium exchanger protein 175 317 1.5E-26 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM460_RS07470 f9477b20d5bbd30265174e187ea63807 325 Pfam PF01699 Sodium/calcium exchanger protein 4 144 4.2E-28 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM460_RS07470 f9477b20d5bbd30265174e187ea63807 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 1.2E-106 T 29-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AM460_RS13165 561221887590a6d35e9f28a476f5e5d3 240 Gene3D G3DSA:3.40.50.150 2 240 1.4E-46 T 29-03-2018 AM460_RS13165 561221887590a6d35e9f28a476f5e5d3 240 SUPERFAMILY SSF53335 17 224 3.68E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS13165 561221887590a6d35e9f28a476f5e5d3 240 Pfam PF13489 Methyltransferase domain 57 186 7.7E-25 T 29-03-2018 AM460_RS13165 561221887590a6d35e9f28a476f5e5d3 240 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 1.9E-91 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM460_RS13165 561221887590a6d35e9f28a476f5e5d3 240 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.423 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM460_RS15715 2e99040409d03b424c3211e045216756 289 SUPERFAMILY SSF46689 1 80 6.27E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS15715 2e99040409d03b424c3211e045216756 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.2E-32 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM460_RS15715 2e99040409d03b424c3211e045216756 289 Gene3D G3DSA:3.40.50.10490 94 283 3.1E-38 T 29-03-2018 AM460_RS15715 2e99040409d03b424c3211e045216756 289 Gene3D G3DSA:1.10.10.10 1 93 7.1E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15715 2e99040409d03b424c3211e045216756 289 Pfam PF01380 SIS domain 124 252 5.1E-28 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS15715 2e99040409d03b424c3211e045216756 289 SUPERFAMILY SSF53697 94 280 2.23E-43 T 29-03-2018 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 Gene3D G3DSA:1.10.1200.10 210 285 4.9E-9 T 29-03-2018 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 Pfam PF00550 Phosphopantetheine attachment site 217 276 2.0E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 SUPERFAMILY SSF52499 1 209 2.22E-64 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 Gene3D G3DSA:3.40.50.850 1 209 1.0E-48 T 29-03-2018 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 Pfam PF00857 Isochorismatase family 32 205 3.8E-38 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 PRINTS PR01398 Isochorismatase signature 168 186 6.6E-51 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 PRINTS PR01398 Isochorismatase signature 112 134 6.6E-51 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 PRINTS PR01398 Isochorismatase signature 80 99 6.6E-51 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 PRINTS PR01398 Isochorismatase signature 2 14 6.6E-51 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 PRINTS PR01398 Isochorismatase signature 186 203 6.6E-51 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 PRINTS PR01398 Isochorismatase signature 63 80 6.6E-51 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 SUPERFAMILY SSF47336 209 280 3.93E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS23420 496d05d2526e80bd9ea457d12fa887a7 285 PIRSF PIRSF001111 1 285 2.3E-132 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM460_RS26460 fbad3d9215e50bc5761cc39df0aa40a2 145 Pfam PF07419 PilM 13 144 2.9E-31 T 29-03-2018 IPR009987 PilM, inner membrane AM460_RS26895 8907a1cf63daa7b146edbcf320237e1a 82 Pfam PF06183 DinI-like family 19 79 1.6E-17 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM460_RS26895 8907a1cf63daa7b146edbcf320237e1a 82 SUPERFAMILY SSF54857 2 81 7.59E-22 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM460_RS26895 8907a1cf63daa7b146edbcf320237e1a 82 Gene3D G3DSA:3.30.910.10 2 79 3.8E-24 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 Pfam PF00106 short chain dehydrogenase 3 197 8.3E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 Gene3D G3DSA:3.40.50.720 1 259 3.6E-53 T 29-03-2018 AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.8E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.8E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.8E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.8E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.8E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS10745 2aa01043c49bf65364890a349ce1260b 259 SUPERFAMILY SSF51735 2 258 7.13E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS04220 2f622bbf34015348bebf42e8092eec72 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 8.1E-53 T 29-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS04220 2f622bbf34015348bebf42e8092eec72 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 3.2E-82 T 29-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS04220 2f622bbf34015348bebf42e8092eec72 246 Gene3D G3DSA:3.30.1240.10 21 81 0.67 T 29-03-2018 AM460_RS04220 2f622bbf34015348bebf42e8092eec72 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 61.537 T 29-03-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM460_RS17115 a24780517b560dfdcff6096c3084cd60 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS17115 a24780517b560dfdcff6096c3084cd60 417 Gene3D G3DSA:1.20.1250.20 225 414 1.8E-14 T 29-03-2018 AM460_RS17115 a24780517b560dfdcff6096c3084cd60 417 Gene3D G3DSA:1.20.1250.20 34 224 1.6E-34 T 29-03-2018 AM460_RS17115 a24780517b560dfdcff6096c3084cd60 417 SUPERFAMILY SSF103473 25 414 1.83E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17115 a24780517b560dfdcff6096c3084cd60 417 Pfam PF07690 Major Facilitator Superfamily 41 260 3.9E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS24265 e09512ecb988221095766a32650265ec 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM460_RS24265 e09512ecb988221095766a32650265ec 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM460_RS24265 e09512ecb988221095766a32650265ec 299 Gene3D G3DSA:1.10.600.10 1 266 8.5E-83 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM460_RS24265 e09512ecb988221095766a32650265ec 299 Gene3D G3DSA:1.10.600.10 267 299 4.0E-4 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM460_RS24265 e09512ecb988221095766a32650265ec 299 SUPERFAMILY SSF48576 1 279 7.4E-88 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM460_RS24265 e09512ecb988221095766a32650265ec 299 Pfam PF00348 Polyprenyl synthetase 34 270 6.8E-57 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 Gene3D G3DSA:3.90.1150.10 413 592 1.1E-53 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 Gene3D G3DSA:3.40.640.10 101 412 2.4E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 5.2E-47 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 PIRSF PIRSF009393 1 711 1.9E-287 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 9.2E-202 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 93 3.0E-14 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 SUPERFAMILY SSF53383 101 559 5.15E-124 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 Gene3D G3DSA:3.90.100.10 593 711 3.3E-35 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 SUPERFAMILY SSF52172 1 100 5.47E-26 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 Gene3D G3DSA:3.40.50.220 3 100 5.0E-26 T 29-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM460_RS09295 6df2104d7d571c8c5d0e99cd137917d2 711 SUPERFAMILY SSF55904 563 711 3.27E-44 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM460_RS12570 13c4a1de17901995797df829a03dd6da 895 SMART SM00778 32 68 5.0E-16 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM460_RS12570 13c4a1de17901995797df829a03dd6da 895 Pfam PF06048 Domain of unknown function (DUF927) 331 614 4.3E-101 T 29-03-2018 IPR009270 Domain of unknown function DUF927 AM460_RS12570 13c4a1de17901995797df829a03dd6da 895 Gene3D G3DSA:3.40.1360.10 195 321 2.4E-15 T 29-03-2018 AM460_RS12570 13c4a1de17901995797df829a03dd6da 895 Gene3D G3DSA:3.90.580.10 17 98 1.1E-10 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM460_RS12570 13c4a1de17901995797df829a03dd6da 895 SUPERFAMILY SSF57783 31 89 3.06E-7 T 29-03-2018 AM460_RS12570 13c4a1de17901995797df829a03dd6da 895 Pfam PF13362 Toprim domain 210 307 1.3E-11 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS12570 13c4a1de17901995797df829a03dd6da 895 Pfam PF08273 Zinc-binding domain of primase-helicase 33 68 6.1E-16 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 Gene3D G3DSA:2.40.40.20 638 759 5.9E-18 T 29-03-2018 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 12 758 0.0 T 29-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 SUPERFAMILY SSF53706 46 625 1.26E-147 T 29-03-2018 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 SUPERFAMILY SSF50692 641 758 1.42E-12 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 PIRSF PIRSF000144 1 759 0.0 T 29-03-2018 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 Gene3D G3DSA:3.40.50.740 331 600 2.0E-42 T 29-03-2018 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 Gene3D G3DSA:3.40.50.740 109 274 1.6E-35 T 29-03-2018 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 Pfam PF01568 Molydopterin dinucleotide binding domain 642 751 5.0E-6 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM460_RS17410 2cd170af16d3cb0b89bf2e4611e6416c 759 Pfam PF00384 Molybdopterin oxidoreductase 108 423 8.5E-29 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS04740 68e3cc313efe15aa407559401ef9c927 205 SUPERFAMILY SSF51569 2 204 7.33E-59 T 29-03-2018 AM460_RS04740 68e3cc313efe15aa407559401ef9c927 205 Gene3D G3DSA:3.20.20.70 1 205 6.7E-43 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS04740 68e3cc313efe15aa407559401ef9c927 205 Pfam PF01081 KDPG and KHG aldolase 5 183 2.3E-29 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM460_RS25525 f820d44147862f2bcd9e5cf6b9f34043 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 37.123 T 29-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AM460_RS25525 f820d44147862f2bcd9e5cf6b9f34043 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.1E-20 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS25525 f820d44147862f2bcd9e5cf6b9f34043 114 SUPERFAMILY SSF89360 8 103 3.34E-31 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS25525 f820d44147862f2bcd9e5cf6b9f34043 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 113 5.5E-39 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM460_RS25525 f820d44147862f2bcd9e5cf6b9f34043 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM460_RS25525 f820d44147862f2bcd9e5cf6b9f34043 114 Gene3D G3DSA:2.60.300.12 8 114 5.8E-39 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM460_RS00180 15dcc827fad191be3940d62c0e41845a 322 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 112 283 9.3E-26 T 29-03-2018 AM460_RS00180 15dcc827fad191be3940d62c0e41845a 322 Gene3D G3DSA:3.40.50.1000 170 315 1.2E-25 T 29-03-2018 IPR023214 HAD-like domain AM460_RS00180 15dcc827fad191be3940d62c0e41845a 322 Gene3D G3DSA:1.10.150.210 123 169 6.8E-24 T 29-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AM460_RS00180 15dcc827fad191be3940d62c0e41845a 322 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 97 315 4.9E-94 T 29-03-2018 AM460_RS00180 15dcc827fad191be3940d62c0e41845a 322 SUPERFAMILY SSF56784 109 316 4.96E-47 T 29-03-2018 IPR023214 HAD-like domain AM460_RS00180 15dcc827fad191be3940d62c0e41845a 322 Pfam PF12710 haloacid dehalogenase-like hydrolase 145 280 2.0E-17 T 29-03-2018 AM460_RS15015 3ee66204766ce5067aac3c93ef2e04c6 77 SUPERFAMILY SSF64307 2 77 2.75E-24 T 29-03-2018 IPR001455 TusA-like domain AM460_RS15015 3ee66204766ce5067aac3c93ef2e04c6 77 Gene3D G3DSA:3.30.110.40 5 77 6.8E-22 T 29-03-2018 IPR001455 TusA-like domain AM460_RS15015 3ee66204766ce5067aac3c93ef2e04c6 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 29-03-2018 IPR001455 TusA-like domain AM460_RS15015 3ee66204766ce5067aac3c93ef2e04c6 77 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-19 T 29-03-2018 IPR001455 TusA-like domain AM460_RS13625 6b69e7c8249dc2d06ae56274f4d3b67a 336 Gene3D G3DSA:1.10.3470.10 32 331 1.4E-31 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS13625 6b69e7c8249dc2d06ae56274f4d3b67a 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 4.3E-49 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 SUPERFAMILY SSF56042 164 340 2.09E-50 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 Gene3D G3DSA:3.30.1330.10 1 162 5.9E-38 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 SUPERFAMILY SSF55326 7 161 5.38E-41 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.215 T 29-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 PIRSF PIRSF036407 1 346 1.5E-116 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 6.6E-19 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 Gene3D G3DSA:3.90.650.10 164 347 6.6E-43 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 344 5.4E-32 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS16190 63fddb6a720b78b1de8e7e062c61c744 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 6.3E-134 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 5.0E-118 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 PIRSF PIRSF001359 13 359 2.9E-108 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 6.2E-194 T 29-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 1.0E-88 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 SUPERFAMILY SSF51569 4 357 6.23E-132 T 29-03-2018 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 Gene3D G3DSA:3.20.20.70 4 358 9.4E-100 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS09555 2850d15ff93041e80764356a1cb98b51 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 Pfam PF13414 TPR repeat 284 325 1.5E-9 T 29-03-2018 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 Pfam PF13181 Tetratricopeptide repeat 351 379 0.0057 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 Gene3D G3DSA:1.25.40.10 350 397 5.5E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 SMART SM00028 351 384 0.39 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 SMART SM00028 311 344 1.1 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 SMART SM00028 277 310 0.0015 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 Gene3D G3DSA:1.25.40.10 273 320 9.4E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 SUPERFAMILY SSF48452 274 380 2.86E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS22685 38b8a5a1e85f785fd6ba6dcfab2e1476 397 Gene3D G3DSA:1.25.40.10 321 349 2.7E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 Pfam PF07702 UTRA domain 96 235 2.9E-31 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 Gene3D G3DSA:3.40.1410.10 82 241 1.8E-34 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 SMART SM00866 96 236 2.6E-25 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.9E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.9E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 9.2E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 Gene3D G3DSA:1.10.10.10 3 76 2.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 SUPERFAMILY SSF46785 8 79 2.13E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 1.6E-104 T 29-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 SMART SM00345 17 75 1.6E-24 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS02325 10aeecac0d80e12339b238cdb955cc3c 241 SUPERFAMILY SSF64288 63 240 1.37E-37 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 2.8E-48 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 Gene3D G3DSA:1.10.10.60 1 49 3.3E-18 T 29-03-2018 AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 SUPERFAMILY SSF48498 84 202 1.17E-16 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 SUPERFAMILY SSF46689 2 65 1.95E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 Gene3D G3DSA:1.10.10.60 50 182 6.4E-10 T 29-03-2018 AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.8E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.8E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.4E-18 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS07110 9014d090b0d760b65a1dae78c52932a4 220 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM460_RS25505 adadc7037914489216f749f8094cd95b 505 Pfam PF01966 HD domain 66 136 6.2E-9 T 29-03-2018 IPR006674 HD domain AM460_RS25505 adadc7037914489216f749f8094cd95b 505 SMART SM00471 62 282 4.5E-11 T 29-03-2018 IPR003607 HD/PDEase domain AM460_RS25505 adadc7037914489216f749f8094cd95b 505 Gene3D G3DSA:1.10.3210.10 3 262 2.8E-54 T 29-03-2018 AM460_RS25505 adadc7037914489216f749f8094cd95b 505 SUPERFAMILY SSF109604 251 432 9.42E-68 T 29-03-2018 AM460_RS25505 adadc7037914489216f749f8094cd95b 505 SUPERFAMILY SSF109604 31 134 9.42E-68 T 29-03-2018 AM460_RS25505 adadc7037914489216f749f8094cd95b 505 SUPERFAMILY SSF109604 182 215 9.42E-68 T 29-03-2018 AM460_RS25505 adadc7037914489216f749f8094cd95b 505 SUPERFAMILY SSF109604 483 501 9.42E-68 T 29-03-2018 AM460_RS25505 adadc7037914489216f749f8094cd95b 505 Gene3D G3DSA:1.10.3410.10 263 390 7.0E-24 T 29-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AM460_RS25505 adadc7037914489216f749f8094cd95b 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.719 T 29-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 AM460_RS25505 adadc7037914489216f749f8094cd95b 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 1.1E-149 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AM460_RS26270 46ae537abc4319841fe95d19e1a4ca53 121 Pfam PF05656 Protein of unknown function (DUF805) 14 119 5.8E-18 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 3.0E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 3.0E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 3.0E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 3.0E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 SUPERFAMILY SSF47384 227 300 4.12E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 SMART SM00388 237 303 1.6E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 SMART SM00387 345 451 4.6E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 SUPERFAMILY SSF55874 293 449 1.05E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 450 1.2E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 299 5.3E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 SUPERFAMILY SSF103190 34 155 3.92E-13 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 Gene3D G3DSA:1.10.287.130 227 299 9.4E-14 T 29-03-2018 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 Gene3D G3DSA:3.30.450.20 31 226 1.6E-11 T 29-03-2018 AM460_RS03025 f911cab8c9bd59c776f2e5581ba9451f 458 Gene3D G3DSA:3.30.565.10 303 457 4.5E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS08535 01253ca20e74209bc3ba1c7febf7acff 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.7E-70 T 29-03-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 AM460_RS08535 01253ca20e74209bc3ba1c7febf7acff 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 8.9E-31 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM460_RS01975 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 6.5E-47 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS01975 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 3.4E-6 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS01975 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 3.4E-6 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS01975 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Gene3D G3DSA:3.30.930.10 9 324 3.0E-68 T 29-03-2018 AM460_RS01975 fe3f3fe9e9fd4a541905a78c2ba045f0 325 SUPERFAMILY SSF55681 12 320 9.38E-85 T 29-03-2018 AM460_RS01975 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.938 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM460_RS01975 fe3f3fe9e9fd4a541905a78c2ba045f0 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.0E-132 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM460_RS23005 884a1f2ffa4258b2a97a4732ced1b997 266 Gene3D G3DSA:3.40.50.1360 1 266 1.7E-87 T 29-03-2018 AM460_RS23005 884a1f2ffa4258b2a97a4732ced1b997 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.893 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM460_RS23005 884a1f2ffa4258b2a97a4732ced1b997 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.5E-144 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM460_RS23005 884a1f2ffa4258b2a97a4732ced1b997 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 1.5E-21 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM460_RS23005 884a1f2ffa4258b2a97a4732ced1b997 266 SUPERFAMILY SSF100950 1 263 6.7E-105 T 29-03-2018 AM460_RS23005 884a1f2ffa4258b2a97a4732ced1b997 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM460_RS13860 9349b0c023e13e5b28da19a2c598a33c 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 1.7E-19 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM460_RS27855 8151f150de995294abdf38564ca9ee1c 656 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 32 644 5.2E-97 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM460_RS27855 8151f150de995294abdf38564ca9ee1c 656 Pfam PF00593 TonB dependent receptor 263 654 3.4E-37 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS27855 8151f150de995294abdf38564ca9ee1c 656 Gene3D G3DSA:2.170.130.10 23 154 1.3E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS27855 8151f150de995294abdf38564ca9ee1c 656 SUPERFAMILY SSF56935 32 656 6.41E-89 T 29-03-2018 AM460_RS27855 8151f150de995294abdf38564ca9ee1c 656 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 32 656 6.8E-126 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM460_RS27855 8151f150de995294abdf38564ca9ee1c 656 Gene3D G3DSA:2.40.170.20 155 656 3.9E-51 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS27855 8151f150de995294abdf38564ca9ee1c 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 149 8.0E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 Gene3D G3DSA:3.30.360.10 630 787 6.5E-52 T 29-03-2018 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 SUPERFAMILY SSF53633 12 299 1.13E-55 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 SUPERFAMILY SSF51735 457 630 3.55E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 8.5E-27 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 Pfam PF00696 Amino acid kinase family 12 284 3.6E-43 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 Gene3D G3DSA:3.40.1160.10 9 318 1.3E-47 T 29-03-2018 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 Pfam PF00742 Homoserine dehydrogenase 608 803 2.6E-45 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 SUPERFAMILY SSF55347 608 791 2.55E-48 T 29-03-2018 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 PIRSF PIRSF000727 12 810 5.3E-304 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 Gene3D G3DSA:3.40.50.720 455 629 1.7E-24 T 29-03-2018 AM460_RS03375 2f93271a48d262257d36c49233b0c54c 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 5.1E-63 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM460_RS28105 8d337e147c8333678de8ff9fb2e9cec4 210 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 7 202 2.5E-75 T 29-03-2018 IPR014114 Type-F conjugative transfer system protein TraW AM460_RS28105 8d337e147c8333678de8ff9fb2e9cec4 210 Pfam PF12477 Sex factor F TraW protein N terminal 4 30 2.7E-9 T 29-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 Gene3D G3DSA:1.10.10.10 1 68 2.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 SMART SM01134 83 242 2.8E-17 T 29-03-2018 AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 Gene3D G3DSA:3.40.50.1360 83 251 5.8E-12 T 29-03-2018 AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 Pfam PF00455 DeoR C terminal sensor domain 88 218 2.5E-16 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 SMART SM00420 16 68 2.9E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 Pfam PF08220 DeoR-like helix-turn-helix domain 16 67 5.9E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 SUPERFAMILY SSF100950 90 216 6.05E-8 T 29-03-2018 AM460_RS07155 cba13b7984f4868b0164097a5c9ab7fc 276 SUPERFAMILY SSF46785 15 73 5.67E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15510 7f806aa4d5cc9a3a755ef1ace640419b 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 5.0E-47 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM460_RS15510 7f806aa4d5cc9a3a755ef1ace640419b 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 1.3E-40 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM460_RS15510 7f806aa4d5cc9a3a755ef1ace640419b 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.278 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM460_RS15510 7f806aa4d5cc9a3a755ef1ace640419b 116 SUPERFAMILY SSF63592 1 98 1.23E-39 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM460_RS15510 7f806aa4d5cc9a3a755ef1ace640419b 116 Gene3D G3DSA:1.10.4000.10 3 102 2.0E-46 T 29-03-2018 AM460_RS05220 252fd291be7ca9643cd0014f9def70e3 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.452 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM460_RS05220 252fd291be7ca9643cd0014f9def70e3 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 7.5E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM460_RS05220 252fd291be7ca9643cd0014f9def70e3 157 PIRSF PIRSF029256 1 154 2.8E-71 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM460_RS05220 252fd291be7ca9643cd0014f9def70e3 157 Gene3D G3DSA:3.40.1280.10 1 156 4.7E-38 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS05220 252fd291be7ca9643cd0014f9def70e3 157 SUPERFAMILY SSF75217 1 152 4.71E-46 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS05220 252fd291be7ca9643cd0014f9def70e3 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.0E-75 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM460_RS05565 b6abb62de2357e28c4cffa4189ca602d 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 9.7E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS05565 b6abb62de2357e28c4cffa4189ca602d 327 SUPERFAMILY SSF52540 3 253 1.45E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05565 b6abb62de2357e28c4cffa4189ca602d 327 SMART SM00382 32 231 7.2E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS05565 b6abb62de2357e28c4cffa4189ca602d 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 3.6E-28 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS05565 b6abb62de2357e28c4cffa4189ca602d 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS05565 b6abb62de2357e28c4cffa4189ca602d 327 Pfam PF00005 ABC transporter 24 181 1.4E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS05565 b6abb62de2357e28c4cffa4189ca602d 327 Gene3D G3DSA:3.40.50.300 1 324 7.5E-76 T 29-03-2018 AM460_RS21430 cc3cdae62680f4feba21bbb857e48ecd 247 Pfam PF05944 Phage small terminase subunit 35 164 5.7E-45 T 29-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AM460_RS21430 cc3cdae62680f4feba21bbb857e48ecd 247 Gene3D G3DSA:1.25.40.10 66 239 1.6E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS14655 b20dce3e230c17d19b299f1decbff630 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 60.145 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM460_RS14655 b20dce3e230c17d19b299f1decbff630 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 167 6.7E-53 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM460_RS14655 b20dce3e230c17d19b299f1decbff630 484 Pfam PF01048 Phosphorylase superfamily 267 431 1.4E-18 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS14655 b20dce3e230c17d19b299f1decbff630 484 SUPERFAMILY SSF53167 9 484 7.33E-161 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM460_RS14655 b20dce3e230c17d19b299f1decbff630 484 Gene3D G3DSA:3.40.50.1580 174 467 1.3E-69 T 29-03-2018 AM460_RS14655 b20dce3e230c17d19b299f1decbff630 484 Gene3D G3DSA:3.30.1730.10 6 170 5.4E-53 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM460_RS14655 b20dce3e230c17d19b299f1decbff630 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 484 2.3E-252 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM460_RS12880 0e01e7407839f231f73069c784a315cb 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 5.0E-48 T 29-03-2018 AM460_RS12880 0e01e7407839f231f73069c784a315cb 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 43.906 T 29-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AM460_RS12880 0e01e7407839f231f73069c784a315cb 199 Gene3D G3DSA:1.10.3210.10 1 199 2.6E-53 T 29-03-2018 AM460_RS12880 0e01e7407839f231f73069c784a315cb 199 Pfam PF13023 HD domain 11 160 6.9E-17 T 29-03-2018 IPR006674 HD domain AM460_RS12880 0e01e7407839f231f73069c784a315cb 199 SMART SM00471 26 151 1.8E-7 T 29-03-2018 IPR003607 HD/PDEase domain AM460_RS12880 0e01e7407839f231f73069c784a315cb 199 SUPERFAMILY SSF109604 2 193 3.43E-45 T 29-03-2018 AM460_RS17310 75f4b0f9be308b63fe5c7c7c78e4968c 462 Gene3D G3DSA:3.40.605.10 3 251 2.7E-71 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS17310 75f4b0f9be308b63fe5c7c7c78e4968c 462 SUPERFAMILY SSF53720 9 460 7.2E-143 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS17310 75f4b0f9be308b63fe5c7c7c78e4968c 462 Gene3D G3DSA:3.40.309.10 252 443 2.2E-68 T 29-03-2018 AM460_RS17310 75f4b0f9be308b63fe5c7c7c78e4968c 462 Pfam PF00171 Aldehyde dehydrogenase family 10 457 7.4E-141 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS17310 75f4b0f9be308b63fe5c7c7c78e4968c 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 261 272 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM460_RS12995 3b051afa5edaa3118caa3bd2a57afb2f 431 Gene3D G3DSA:3.60.120.10 1 431 2.9E-95 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS12995 3b051afa5edaa3118caa3bd2a57afb2f 431 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 427 1.0E-107 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM460_RS12995 3b051afa5edaa3118caa3bd2a57afb2f 431 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 430 30.362 T 29-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM460_RS12995 3b051afa5edaa3118caa3bd2a57afb2f 431 Pfam PF00425 chorismate binding enzyme 170 420 1.2E-61 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM460_RS12995 3b051afa5edaa3118caa3bd2a57afb2f 431 SUPERFAMILY SSF56322 12 428 8.11E-104 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS15780 c90bba77bd7bf5ab5690049d7b11b265 290 Pfam PF05425 Copper resistance protein D 185 284 5.5E-25 T 29-03-2018 IPR008457 Copper resistance protein D GO:0016021 AM460_RS03430 09de6da6b58575e022e59620ac8a4c4e 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.916 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM460_RS03430 09de6da6b58575e022e59620ac8a4c4e 161 Pfam PF03737 Aldolase/RraA 5 152 1.9E-36 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM460_RS03430 09de6da6b58575e022e59620ac8a4c4e 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.0E-62 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AM460_RS03430 09de6da6b58575e022e59620ac8a4c4e 161 Gene3D G3DSA:3.50.30.40 1 159 6.2E-37 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM460_RS03430 09de6da6b58575e022e59620ac8a4c4e 161 SUPERFAMILY SSF89562 2 158 7.06E-45 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM460_RS03430 09de6da6b58575e022e59620ac8a4c4e 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 6.6E-90 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM460_RS06915 389919749e70ffc67e9bf46e53468622 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.9E-51 T 29-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06915 389919749e70ffc67e9bf46e53468622 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.7E-32 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P AM460_RS06915 389919749e70ffc67e9bf46e53468622 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 29-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06915 389919749e70ffc67e9bf46e53468622 144 Gene3D G3DSA:3.100.10.10 42 144 9.4E-25 T 29-03-2018 AM460_RS06915 389919749e70ffc67e9bf46e53468622 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P AM460_RS06915 389919749e70ffc67e9bf46e53468622 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.536 T 29-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AM460_RS21195 5058006f1551156ad54d0cc44e39d93f 983 Pfam PF10145 Phage-related minor tail protein 160 371 4.1E-19 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS21195 5058006f1551156ad54d0cc44e39d93f 983 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 119 493 2.0E-16 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS21195 5058006f1551156ad54d0cc44e39d93f 983 Gene3D G3DSA:1.20.5.1230 15 880 3.7E-11 T 29-03-2018 AM460_RS26890 6bcc983689d48691904e1d90a41190a4 89 PIRSF PIRSF003278 1 89 1.7E-62 T 29-03-2018 IPR016388 Putative partitioning protein SopC AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 69 124 6.6E-8 T 29-03-2018 IPR000644 CBS domain AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 141 189 6.2E-5 T 29-03-2018 IPR000644 CBS domain AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.30.465.10 200 281 3.3E-27 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF03471 Transporter associated domain 206 281 2.2E-23 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM01091 205 283 1.1E-31 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.10.580.10 50 199 5.4E-35 T 29-03-2018 AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF56176 204 289 2.73E-24 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF54631 66 202 4.67E-32 T 29-03-2018 AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 78 127 4.2 T 29-03-2018 IPR000644 CBS domain AM460_RS23095 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 141 189 1.6 T 29-03-2018 IPR000644 CBS domain AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 Pfam PF00817 impB/mucB/samB family 6 149 1.9E-36 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 353 1.1E-16 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 Gene3D G3DSA:3.30.70.270 37 115 4.6E-19 T 29-03-2018 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 Gene3D G3DSA:3.30.70.270 116 172 9.4E-10 T 29-03-2018 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 Pfam PF13438 Domain of unknown function (DUF4113) 372 419 1.1E-20 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 SUPERFAMILY SSF100879 247 341 7.59E-7 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 Gene3D G3DSA:1.10.150.20 173 247 3.6E-16 T 29-03-2018 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 Gene3D G3DSA:3.30.1490.100 248 363 6.8E-25 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM460_RS26905 7650208a426b3b29d9c8596ef236b88b 424 SUPERFAMILY SSF56672 1 238 1.87E-67 T 29-03-2018 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 26 36 2.0E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 262 272 2.0E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 352 373 2.0E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 375 387 2.0E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 109 128 2.0E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 Pfam PF00083 Sugar (and other) transporter 18 450 2.0E-141 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 Gene3D G3DSA:1.20.1250.20 3 231 2.8E-37 T 29-03-2018 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 Gene3D G3DSA:1.20.1250.20 232 463 1.9E-41 T 29-03-2018 AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 SUPERFAMILY SSF103473 13 448 1.57E-77 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS09425 fbf57f1403d47a941868a613ff5fdbf7 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 1.4E-152 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 152 9.0E-44 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 PRINTS PR00969 Pili chaperone signature 172 187 3.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 PRINTS PR00969 Pili chaperone signature 76 97 3.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 PRINTS PR00969 Pili chaperone signature 27 36 3.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 PRINTS PR00969 Pili chaperone signature 105 122 3.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 PRINTS PR00969 Pili chaperone signature 133 148 3.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 Gene3D G3DSA:2.60.40.10 26 152 1.6E-39 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 Gene3D G3DSA:2.60.40.10 155 246 8.0E-23 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 SUPERFAMILY SSF49584 155 243 9.16E-19 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 SUPERFAMILY SSF49354 21 151 6.8E-42 T 29-03-2018 IPR008962 PapD-like AM460_RS25625 8ae8c03351846821a8c36f96d373b428 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 239 5.4E-18 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS18305 b570bd8b39aa0632ccd9b20d4c62b7b6 349 SUPERFAMILY SSF52096 100 209 2.62E-33 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS18305 b570bd8b39aa0632ccd9b20d4c62b7b6 349 SUPERFAMILY SSF52096 240 299 2.62E-33 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS18305 b570bd8b39aa0632ccd9b20d4c62b7b6 349 Gene3D G3DSA:3.90.226.10 33 307 2.0E-33 T 29-03-2018 AM460_RS18305 b570bd8b39aa0632ccd9b20d4c62b7b6 349 Pfam PF01343 Peptidase family S49 161 310 5.6E-51 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM460_RS18305 b570bd8b39aa0632ccd9b20d4c62b7b6 349 Pfam PF08496 Peptidase family S49 N-terminal 2 158 2.8E-62 T 29-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 PRINTS PR00990 Ribokinase signature 185 200 1.5E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 PRINTS PR00990 Ribokinase signature 36 55 1.5E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 PRINTS PR00990 Ribokinase signature 224 235 1.5E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 SUPERFAMILY SSF53613 1 300 3.59E-69 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 Gene3D G3DSA:3.40.1190.20 1 315 3.2E-64 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 41 65 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS16135 0008b24796596c9d7443d12f49af9f2b 315 Pfam PF00294 pfkB family carbohydrate kinase 5 300 4.2E-70 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS22145 88483c2c8b2c1010da3bfd7c65b91dee 408 SMART SM00267 285 407 3.2E-14 T 29-03-2018 IPR000160 GGDEF domain AM460_RS22145 88483c2c8b2c1010da3bfd7c65b91dee 408 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 388 7.8E-19 T 29-03-2018 IPR000160 GGDEF domain AM460_RS22145 88483c2c8b2c1010da3bfd7c65b91dee 408 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 393 1.4E-19 T 29-03-2018 IPR000160 GGDEF domain AM460_RS22145 88483c2c8b2c1010da3bfd7c65b91dee 408 SUPERFAMILY SSF55073 300 406 6.98E-21 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS22145 88483c2c8b2c1010da3bfd7c65b91dee 408 Pfam PF17156 Gammaproteobacterial periplasmic sensor domain 26 229 5.4E-140 T 29-03-2018 IPR033422 Gammaproteobacterial periplasmic sensor domain GAPES2 AM460_RS22145 88483c2c8b2c1010da3bfd7c65b91dee 408 Gene3D G3DSA:3.30.70.270 286 407 6.6E-24 T 29-03-2018 AM460_RS16245 da1b378e32852e73288151cd92c4bf7f 235 Pfam PF09335 SNARE associated Golgi protein 80 197 1.8E-24 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS08650 36531f931d02a3dcf310c1d70db0d6c2 186 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 184 8.4E-65 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM460_RS08650 36531f931d02a3dcf310c1d70db0d6c2 186 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 182 5.4E-59 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM460_RS10295 b149efe21b9aa1e715c4f7a2b8051d58 454 SUPERFAMILY SSF102405 118 330 6.56E-42 T 29-03-2018 AM460_RS10295 b149efe21b9aa1e715c4f7a2b8051d58 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 2.0E-55 T 29-03-2018 IPR021826 Domain of unknown function DUF3412 AM460_RS10295 b149efe21b9aa1e715c4f7a2b8051d58 454 Gene3D G3DSA:3.30.1850.10 3 111 7.1E-48 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 AM460_RS10295 b149efe21b9aa1e715c4f7a2b8051d58 454 Gene3D G3DSA:3.40.50.450 124 452 5.4E-102 T 29-03-2018 AM460_RS10295 b149efe21b9aa1e715c4f7a2b8051d58 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 2.2E-46 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 AM460_RS10295 b149efe21b9aa1e715c4f7a2b8051d58 454 Pfam PF03641 Possible lysine decarboxylase 190 329 1.5E-33 T 29-03-2018 IPR031100 LOG family AM460_RS18935 a0b2da53f49701b5a83386d556ba8ddd 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 1.9E-128 T 29-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS18935 a0b2da53f49701b5a83386d556ba8ddd 225 Gene3D G3DSA:1.20.950.20 1 216 2.5E-43 T 29-03-2018 AM460_RS18935 a0b2da53f49701b5a83386d556ba8ddd 225 SUPERFAMILY SSF103501 1 224 3.66E-71 T 29-03-2018 IPR023234 NarG-like domain AM460_RS18935 a0b2da53f49701b5a83386d556ba8ddd 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 7.1E-80 T 29-03-2018 IPR023234 NarG-like domain AM460_RS25755 4e4c1ca5e1913ffa502a80a431142690 587 Pfam PF11737 Protein of unknown function (DUF3300) 75 335 4.9E-81 T 29-03-2018 IPR021728 Protein of unknown function DUF3300 AM460_RS19310 b1fcc16a3efca12b8c332876bd3ae1fb 244 Pfam PF07317 Flagellar regulator YcgR 8 109 1.8E-26 T 29-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AM460_RS19310 b1fcc16a3efca12b8c332876bd3ae1fb 244 Gene3D G3DSA:2.40.10.220 111 244 3.4E-19 T 29-03-2018 AM460_RS19310 b1fcc16a3efca12b8c332876bd3ae1fb 244 Pfam PF07238 PilZ domain 112 230 3.4E-12 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM460_RS19310 b1fcc16a3efca12b8c332876bd3ae1fb 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 29.491 T 29-03-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 AM460_RS19310 b1fcc16a3efca12b8c332876bd3ae1fb 244 Gene3D G3DSA:2.30.110.10 9 110 1.5E-23 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS18555 e27b60143d1bf8bebd38be2666ecc0cb 121 Pfam PF01844 HNH endonuclease 49 94 2.5E-7 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM460_RS18555 e27b60143d1bf8bebd38be2666ecc0cb 121 Gene3D G3DSA:3.40.1800.10 28 100 2.7E-16 T 29-03-2018 AM460_RS21390 061934495a5c183982a525c58485b00e 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 1.9E-45 T 29-03-2018 IPR009678 Bacteriophage tail completion protein R AM460_RS22330 812a3947e9471ac6bdd60bd86d2c5cd0 101 Pfam PF08719 Domain of unknown function (DUF1768) 34 97 1.4E-17 T 29-03-2018 IPR012816 NADAR AM460_RS22330 812a3947e9471ac6bdd60bd86d2c5cd0 101 SUPERFAMILY SSF143990 35 100 4.58E-24 T 29-03-2018 AM460_RS05395 a602045be6602b08e6009d7fd91a4d7a 417 SUPERFAMILY SSF53383 26 411 1.93E-58 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS05395 a602045be6602b08e6009d7fd91a4d7a 417 Gene3D G3DSA:3.90.1150.10 293 413 5.0E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS05395 a602045be6602b08e6009d7fd91a4d7a 417 Pfam PF00155 Aminotransferase class I and II 165 391 3.7E-21 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS05395 a602045be6602b08e6009d7fd91a4d7a 417 Gene3D G3DSA:3.40.640.10 69 292 8.8E-37 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS23830 6c4a7ed879967413822c75d9d5fba33a 219 Pfam PF11153 Protein of unknown function (DUF2931) 8 217 1.3E-41 T 29-03-2018 IPR021326 Protein of unknown function DUF2931 AM460_RS15930 461c0dabb3596c9c538a153882ca692a 532 Pfam PF00563 EAL domain 272 501 1.8E-58 T 29-03-2018 IPR001633 EAL domain AM460_RS15930 461c0dabb3596c9c538a153882ca692a 532 Gene3D G3DSA:3.20.20.450 261 517 1.2E-72 T 29-03-2018 IPR001633 EAL domain AM460_RS15930 461c0dabb3596c9c538a153882ca692a 532 Pfam PF12792 CSS motif domain associated with EAL 43 239 2.4E-38 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM460_RS15930 461c0dabb3596c9c538a153882ca692a 532 SUPERFAMILY SSF141868 272 515 1.15E-71 T 29-03-2018 IPR001633 EAL domain AM460_RS15930 461c0dabb3596c9c538a153882ca692a 532 SMART SM00052 265 506 1.7E-112 T 29-03-2018 IPR001633 EAL domain AM460_RS02365 1f339af648420a731745f795194e7e6d 185 SUPERFAMILY SSF52540 3 178 5.52E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02365 1f339af648420a731745f795194e7e6d 185 Gene3D G3DSA:3.40.50.300 1 183 1.8E-26 T 29-03-2018 AM460_RS02365 1f339af648420a731745f795194e7e6d 185 Pfam PF13238 AAA domain 6 139 2.1E-10 T 29-03-2018 AM460_RS02365 1f339af648420a731745f795194e7e6d 185 SMART SM00072 2 179 8.4E-37 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM460_RS02365 1f339af648420a731745f795194e7e6d 185 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 176 34.716 T 29-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS02365 1f339af648420a731745f795194e7e6d 185 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 1.9E-74 T 29-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS22155 1f13038718846f35edbd5e67ee271f03 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 78 4.7E-15 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM460_RS22155 1f13038718846f35edbd5e67ee271f03 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 9.7E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22155 1f13038718846f35edbd5e67ee271f03 303 SUPERFAMILY SSF161098 96 283 8.37E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22155 1f13038718846f35edbd5e67ee271f03 303 Gene3D G3DSA:1.10.3720.10 27 291 8.7E-46 T 29-03-2018 AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 SMART SM00671 136 171 3.4E-7 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 SMART SM00671 63 99 6.8E-9 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 SMART SM00671 100 135 2.2E-12 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 Pfam PF08238 Sel1 repeat 136 169 1.7E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 Pfam PF08238 Sel1 repeat 64 98 1.6E-9 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 Pfam PF08238 Sel1 repeat 100 135 9.3E-11 T 29-03-2018 IPR006597 Sel1-like repeat AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 SUPERFAMILY SSF81901 59 179 9.02E-32 T 29-03-2018 AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 Gene3D G3DSA:2.60.40.1180 114 183 2.9E-22 T 29-03-2018 AM460_RS23150 99f370224c62963a8b288eb2fdf38618 184 Gene3D G3DSA:2.60.40.1180 24 113 1.6E-20 T 29-03-2018 AM460_RS01615 76ce23c1cda75ca129242c0b792833a0 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 2.8E-75 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM460_RS01615 76ce23c1cda75ca129242c0b792833a0 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 1.5E-92 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM460_RS01615 76ce23c1cda75ca129242c0b792833a0 185 Gene3D G3DSA:3.40.30.10 20 182 1.3E-5 T 29-03-2018 AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 408 4.3E-44 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 SMART SM00267 242 410 1.1E-66 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 SMART SM00091 129 198 0.0039 T 29-03-2018 IPR000014 PAS domain AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 SMART SM00091 3 70 5.5 T 29-03-2018 IPR000014 PAS domain AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 Gene3D G3DSA:3.30.70.270 262 410 5.7E-49 T 29-03-2018 AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.1E-45 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 Gene3D G3DSA:3.30.450.20 123 261 2.4E-18 T 29-03-2018 AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 SUPERFAMILY SSF55785 148 250 5.76E-15 T 29-03-2018 IPR000014 PAS domain AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 249 1.6E-12 T 29-03-2018 IPR000014 PAS domain AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 SUPERFAMILY SSF55073 258 408 3.3E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS17925 41e98e3259b567226b49ae929d6e112a 410 Pfam PF08448 PAS fold 142 244 3.5E-8 T 29-03-2018 IPR013656 PAS fold-4 AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 PIRSF PIRSF002599 1 70 4.1E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 Gene3D G3DSA:2.40.50.140 2 70 2.1E-28 T 29-03-2018 AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 SMART SM00357 6 70 2.5E-31 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 7 22 5.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 28 37 5.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 43 61 5.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 SUPERFAMILY SSF50249 4 69 3.94E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS05480 40785a8282413070fe126dfd41e458ff 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.9E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS21870 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 72 7.1E-36 T 29-03-2018 AM460_RS21870 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM460_RS21870 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS21870 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 9.2E-28 T 29-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AM460_RS21870 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM460_RS21870 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 Gene3D G3DSA:3.30.70.20 92 149 3.1E-9 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 Gene3D G3DSA:3.30.70.20 20 53 6.4E-9 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 Gene3D G3DSA:3.30.70.20 66 91 1.2E-15 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 Gene3D G3DSA:3.30.70.20 1 19 0.021 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 SUPERFAMILY SSF54862 136 182 5.14E-42 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 SUPERFAMILY SSF54862 2 101 5.14E-42 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 Gene3D G3DSA:3.30.70.20 54 65 0.19 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 Gene3D G3DSA:3.30.70.20 150 180 0.014 T 29-03-2018 AM460_RS10650 8e101d1b35547d0333362e1aef59e47a 203 Pfam PF13247 4Fe-4S dicluster domain 47 97 6.5E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.904 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 SUPERFAMILY SSF64158 79 310 8.11E-86 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 Pfam PF01676 Metalloenzyme superfamily 6 500 1.9E-84 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 Gene3D G3DSA:3.40.720.10 301 513 1.2E-35 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 1.8E-83 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 SUPERFAMILY SSF53649 311 510 1.83E-74 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 SUPERFAMILY SSF53649 5 79 1.83E-74 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 Gene3D G3DSA:3.40.1450.10 79 300 8.5E-97 T 29-03-2018 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 Gene3D G3DSA:3.20.20.370 1 51 0.15 T 29-03-2018 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 1.3E-246 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS05185 331ed97c427ebc1c50a741d867324cec 514 PIRSF PIRSF001492 1 514 4.7E-206 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS07415 6aa8c3f6bc3d4c9b66bfec303e76f0f9 210 Pfam PF10707 PhoP regulatory network protein YrbL 2 185 6.2E-63 T 29-03-2018 IPR019647 PhoP regulatory network protein YrbL AM460_RS07415 6aa8c3f6bc3d4c9b66bfec303e76f0f9 210 SUPERFAMILY SSF56112 13 152 9.09E-9 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS07415 6aa8c3f6bc3d4c9b66bfec303e76f0f9 210 Gene3D G3DSA:1.10.510.10 2 187 2.9E-6 T 29-03-2018 AM460_RS16805 fdfcd1672ba4f7a6521fa0cdc4637a5d 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 117.916 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM460_RS16805 fdfcd1672ba4f7a6521fa0cdc4637a5d 215 SUPERFAMILY SSF53098 13 207 1.3E-56 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS16805 fdfcd1672ba4f7a6521fa0cdc4637a5d 215 SMART SM00479 18 203 6.0E-42 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS16805 fdfcd1672ba4f7a6521fa0cdc4637a5d 215 Gene3D G3DSA:3.30.420.10 9 214 1.3E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS16805 fdfcd1672ba4f7a6521fa0cdc4637a5d 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 8.6E-116 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM460_RS16805 fdfcd1672ba4f7a6521fa0cdc4637a5d 215 Pfam PF00929 Exonuclease 20 194 3.8E-39 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS25490 4c44df88a80089b30eecda93d026d61f 385 Pfam PF05651 Putative sugar diacid recognition 6 138 4.9E-49 T 29-03-2018 IPR008599 Putative sugar diacid recognition AM460_RS25490 4c44df88a80089b30eecda93d026d61f 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 380 3.4E-22 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM460_RS25490 4c44df88a80089b30eecda93d026d61f 385 Gene3D G3DSA:1.10.10.60 308 359 1.2E-5 T 29-03-2018 AM460_RS07080 a03d1b3117510b8cf1e78513a0256681 341 Gene3D G3DSA:3.40.190.10 26 141 4.6E-20 T 29-03-2018 AM460_RS07080 a03d1b3117510b8cf1e78513a0256681 341 SMART SM00062 36 265 2.3E-61 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS07080 a03d1b3117510b8cf1e78513a0256681 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 1.6E-32 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM460_RS07080 a03d1b3117510b8cf1e78513a0256681 341 SUPERFAMILY SSF53850 27 256 7.61E-49 T 29-03-2018 AM460_RS07080 a03d1b3117510b8cf1e78513a0256681 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM460_RS07080 a03d1b3117510b8cf1e78513a0256681 341 Gene3D G3DSA:3.40.190.10 142 223 9.4E-13 T 29-03-2018 AM460_RS27085 1e3379df10f19172476ccc71a138ad9e 103 Pfam PF07178 TraL protein 11 102 8.2E-32 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM460_RS27085 1e3379df10f19172476ccc71a138ad9e 103 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 9 102 5.6E-22 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM460_RS27085 1e3379df10f19172476ccc71a138ad9e 103 PIRSF PIRSF003259 1 103 2.3E-52 T 29-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 AM460_RS02905 3f0444b4d3969134a61ae9e5a192d6ec 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.5E-51 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS02905 3f0444b4d3969134a61ae9e5a192d6ec 164 SUPERFAMILY SSF52728 1 159 2.35E-53 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS02905 3f0444b4d3969134a61ae9e5a192d6ec 164 Gene3D G3DSA:3.40.35.10 2 158 3.1E-57 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS02905 3f0444b4d3969134a61ae9e5a192d6ec 164 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 151 4.1E-67 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM460_RS16380 b20f9fa6b0015e4f2125d104fd59a94d 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 2.0E-100 T 29-03-2018 AM460_RS16380 b20f9fa6b0015e4f2125d104fd59a94d 178 Pfam PF14002 YniB-like protein 15 177 4.1E-77 T 29-03-2018 IPR025229 YniB-like protein AM460_RS26185 08bd2ff6662e2996d3b840b2bf00c967 443 Gene3D G3DSA:1.20.1250.20 221 442 4.0E-32 T 29-03-2018 AM460_RS26185 08bd2ff6662e2996d3b840b2bf00c967 443 Pfam PF00083 Sugar (and other) transporter 32 433 2.0E-52 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS26185 08bd2ff6662e2996d3b840b2bf00c967 443 SUPERFAMILY SSF103473 8 429 9.55E-77 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS26185 08bd2ff6662e2996d3b840b2bf00c967 443 Gene3D G3DSA:1.20.1250.20 12 210 2.4E-33 T 29-03-2018 AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 SUPERFAMILY SSF81296 423 537 1.89E-27 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 SUPERFAMILY SSF74650 45 421 4.08E-146 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 8.8E-181 T 29-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 Gene3D G3DSA:2.70.98.10 45 419 1.8E-155 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 PIRSF PIRSF006281 1 538 1.3E-207 T 29-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 32 9.0E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 Gene3D G3DSA:2.60.40.10 423 538 3.4E-27 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS17750 fbc1de8b830a80c635200a254074595f 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 61.141 T 29-03-2018 IPR023724 Glucan biosynthesis, MdoD AM460_RS26030 ec594552cfa3990942f3b1fb09b5584c 201 SUPERFAMILY SSF52016 4 193 1.24E-59 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS26030 ec594552cfa3990942f3b1fb09b5584c 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.705 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM460_RS26030 ec594552cfa3990942f3b1fb09b5584c 201 Pfam PF00694 Aconitase C-terminal domain 3 126 5.3E-40 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM460_RS26030 ec594552cfa3990942f3b1fb09b5584c 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 5.9E-104 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM460_RS26030 ec594552cfa3990942f3b1fb09b5584c 201 Gene3D G3DSA:3.20.19.10 1 177 3.4E-51 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 SUPERFAMILY SSF75217 185 343 6.8E-36 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 110 181 1.0E-12 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 PIRSF PIRSF006280 1 345 4.3E-176 T 29-03-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 Pfam PF00588 SpoU rRNA Methylase family 199 336 7.1E-28 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 Gene3D G3DSA:3.40.1280.10 186 345 4.0E-34 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 Gene3D G3DSA:3.30.1330.30 97 179 7.8E-9 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 SMART SM00967 109 184 7.4E-9 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM460_RS11485 6f197dd92e06becfa647ec9a7eb1bc1c 345 SUPERFAMILY SSF55315 103 179 3.3E-10 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AM460_RS00535 216280dede431b487c7529739f3d3669 148 Gene3D G3DSA:3.40.630.30 1 148 5.7E-34 T 29-03-2018 AM460_RS00535 216280dede431b487c7529739f3d3669 148 SUPERFAMILY SSF55729 3 146 2.66E-34 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS00535 216280dede431b487c7529739f3d3669 148 Pfam PF00583 Acetyltransferase (GNAT) family 17 120 9.6E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS00535 216280dede431b487c7529739f3d3669 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 5.2E-48 T 29-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 Hamap MF_00970 Ribonuclease E [rne]. 1 1047 40.998 T 29-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 Gene3D G3DSA:2.40.50.140 33 124 2.8E-31 T 29-03-2018 AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 Gene3D G3DSA:2.10.110.10 386 739 0.15 T 29-03-2018 AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 SUPERFAMILY SSF50249 40 124 1.82E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 Pfam PF10150 Ribonuclease E/G family 121 391 3.0E-93 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 Pfam PF00575 S1 RNA binding domain 36 118 3.6E-16 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 SMART SM00316 37 119 9.5E-12 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1022 1058 1.9E-16 T 29-03-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal AM460_RS20145 c3bd3d5265712993cd3f734a353b3374 1061 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 6.2E-172 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM460_RS22020 7c2d96e30d3d8da3971959f7c5f71b7a 314 SUPERFAMILY SSF161098 24 305 7.48E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22020 7c2d96e30d3d8da3971959f7c5f71b7a 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 308 6.6E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22020 7c2d96e30d3d8da3971959f7c5f71b7a 314 Gene3D G3DSA:1.10.3720.10 27 308 5.0E-42 T 29-03-2018 AM460_RS15960 a3a31d17671eca9f3cc6674aea4faab9 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 29-03-2018 IPR019897 RidA, conserved site AM460_RS15960 a3a31d17671eca9f3cc6674aea4faab9 114 SUPERFAMILY SSF55298 5 114 2.67E-27 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS15960 a3a31d17671eca9f3cc6674aea4faab9 114 Pfam PF01042 Endoribonuclease L-PSP 4 114 1.6E-28 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM460_RS15960 a3a31d17671eca9f3cc6674aea4faab9 114 Gene3D G3DSA:3.30.1330.40 2 114 1.6E-21 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS20435 48c27b40135ba25dde22d8d59b40aea4 672 Gene3D G3DSA:3.20.20.370 69 491 2.5E-45 T 29-03-2018 AM460_RS20435 48c27b40135ba25dde22d8d59b40aea4 672 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 665 1.6E-270 T 29-03-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 AM460_RS20435 48c27b40135ba25dde22d8d59b40aea4 672 SUPERFAMILY SSF88713 224 348 7.79E-36 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS20435 48c27b40135ba25dde22d8d59b40aea4 672 SUPERFAMILY SSF88713 65 196 7.79E-36 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS20435 48c27b40135ba25dde22d8d59b40aea4 672 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 645 6.1E-144 T 29-03-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AM460_RS20435 48c27b40135ba25dde22d8d59b40aea4 672 Pfam PF01522 Polysaccharide deacetylase 102 270 2.5E-30 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM460_RS20005 2683bebb39c3c639a11acccae6f73705 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.8E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS20005 2683bebb39c3c639a11acccae6f73705 210 SUPERFAMILY SSF46689 11 83 9.23E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS20005 2683bebb39c3c639a11acccae6f73705 210 SUPERFAMILY SSF48498 92 206 6.53E-27 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS20005 2683bebb39c3c639a11acccae6f73705 210 Gene3D G3DSA:1.10.10.60 9 70 7.5E-20 T 29-03-2018 AM460_RS20005 2683bebb39c3c639a11acccae6f73705 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 3.9E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS20005 2683bebb39c3c639a11acccae6f73705 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 3.9E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS20005 2683bebb39c3c639a11acccae6f73705 210 Gene3D G3DSA:1.10.357.10 71 204 2.5E-21 T 29-03-2018 AM460_RS16585 b46ced53e13575ed67d3fb8bd80beebc 404 Pfam PF07690 Major Facilitator Superfamily 13 289 3.6E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS16585 b46ced53e13575ed67d3fb8bd80beebc 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS16585 b46ced53e13575ed67d3fb8bd80beebc 404 Gene3D G3DSA:1.20.1250.20 209 401 2.9E-18 T 29-03-2018 AM460_RS16585 b46ced53e13575ed67d3fb8bd80beebc 404 Gene3D G3DSA:1.20.1250.20 2 208 3.3E-22 T 29-03-2018 AM460_RS16585 b46ced53e13575ed67d3fb8bd80beebc 404 SUPERFAMILY SSF103473 6 397 2.22E-44 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS18820 37bfc108960179714ca5be537ab44297 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 1.2E-27 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS18820 37bfc108960179714ca5be537ab44297 334 Gene3D G3DSA:3.40.50.300 8 331 1.9E-79 T 29-03-2018 AM460_RS18820 37bfc108960179714ca5be537ab44297 334 Pfam PF00005 ABC transporter 41 192 5.9E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS18820 37bfc108960179714ca5be537ab44297 334 SUPERFAMILY SSF52540 22 264 3.04E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18820 37bfc108960179714ca5be537ab44297 334 SMART SM00382 49 242 5.5E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS18820 37bfc108960179714ca5be537ab44297 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 9.9E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS18820 37bfc108960179714ca5be537ab44297 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS07530 66467dd515a8ec1579ad2689f8543f63 321 SUPERFAMILY SSF103481 41 143 2.62E-12 T 29-03-2018 AM460_RS07530 66467dd515a8ec1579ad2689f8543f63 321 Pfam PF00892 EamA-like transporter family 7 142 1.1E-28 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS07530 66467dd515a8ec1579ad2689f8543f63 321 Pfam PF00892 EamA-like transporter family 159 291 8.9E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 SUPERFAMILY SSF51735 317 652 2.74E-76 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 3.2E-18 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.2E-46 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 Gene3D G3DSA:3.10.25.10 203 305 1.3E-22 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 66.887 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 PIRSF PIRSF036506 1 660 0.0 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 SUPERFAMILY SSF53328 1 202 3.14E-54 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 Pfam PF00551 Formyl transferase 53 175 4.3E-24 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 SUPERFAMILY SSF50486 204 304 2.2E-24 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 Gene3D G3DSA:3.40.50.720 314 658 9.5E-48 T 29-03-2018 AM460_RS13050 b387e221cbbe758f0c60f4aecea200ec 660 Gene3D G3DSA:3.40.50.170 1 201 6.1E-46 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM460_RS27495 3c5b64fe6653c5b88a4ac47594aeceda 223 Pfam PF06586 TraK protein 8 215 3.7E-43 T 29-03-2018 IPR010563 Pilus assembly TraK AM460_RS27495 3c5b64fe6653c5b88a4ac47594aeceda 223 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 3 218 1.7E-71 T 29-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK AM460_RS20580 a25e42c3067fde633731d827a7237dd0 390 SUPERFAMILY SSF48695 8 185 5.06E-52 T 29-03-2018 IPR011031 Multihaem cytochrome AM460_RS20580 a25e42c3067fde633731d827a7237dd0 390 PIRSF PIRSF000014 1 383 1.3E-183 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AM460_RS20580 a25e42c3067fde633731d827a7237dd0 390 Gene3D G3DSA:1.10.1130.10 278 385 0.21 T 29-03-2018 AM460_RS20580 a25e42c3067fde633731d827a7237dd0 390 Gene3D G3DSA:1.10.468.10 39 203 3.9E-30 T 29-03-2018 AM460_RS20580 a25e42c3067fde633731d827a7237dd0 390 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 184 3.3E-68 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AM460_RS20580 a25e42c3067fde633731d827a7237dd0 390 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 2 383 1.7E-198 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 SUPERFAMILY SSF49584 152 231 2.62E-17 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 Gene3D G3DSA:2.60.40.10 23 142 4.3E-32 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 PRINTS PR00969 Pili chaperone signature 70 91 1.4E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 PRINTS PR00969 Pili chaperone signature 100 117 1.4E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 PRINTS PR00969 Pili chaperone signature 123 138 1.4E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 PRINTS PR00969 Pili chaperone signature 160 175 1.4E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 PRINTS PR00969 Pili chaperone signature 24 33 1.4E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 Gene3D G3DSA:2.60.40.10 147 237 9.6E-15 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 8.0E-35 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 SUPERFAMILY SSF49354 24 141 8.9E-36 T 29-03-2018 IPR008962 PapD-like AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site AM460_RS08270 1105d5141e16642e3455fe7ea3fa5630 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 222 6.0E-9 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 Gene3D G3DSA:3.40.50.450 212 307 1.5E-8 T 29-03-2018 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.102 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 29-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.9E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 PIRSF PIRSF000532 1 320 2.2E-131 T 29-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.9E-124 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 Pfam PF00365 Phosphofructokinase 4 276 2.9E-107 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 SUPERFAMILY SSF53784 3 309 5.23E-114 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM460_RS03495 9f6606c2e93c6ac75fdc60dff2f54955 320 Gene3D G3DSA:3.40.50.450 1 211 3.7E-83 T 29-03-2018 AM460_RS26070 9cb8f7fc93dfe075dc962e5a9bf6c78c 145 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 9 140 3.9E-18 T 29-03-2018 IPR009936 Protein of unknown function DUF1468 AM460_RS09580 6af1c916338086663360c2fc643b9571 103 SUPERFAMILY SSF53850 9 88 8.87E-6 T 29-03-2018 AM460_RS09580 6af1c916338086663360c2fc643b9571 103 Gene3D G3DSA:3.40.190.10 1 74 6.3E-5 T 29-03-2018 AM460_RS23515 ee420585ce88629fed08cc0db7319559 311 Gene3D G3DSA:3.40.50.2300 20 141 1.1E-25 T 29-03-2018 AM460_RS23515 ee420585ce88629fed08cc0db7319559 311 Pfam PF13407 Periplasmic binding protein domain 29 279 5.5E-49 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS23515 ee420585ce88629fed08cc0db7319559 311 SUPERFAMILY SSF53822 25 304 2.02E-68 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS23515 ee420585ce88629fed08cc0db7319559 311 Gene3D G3DSA:3.40.50.2300 142 306 4.6E-29 T 29-03-2018 AM460_RS00520 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 SMART SM00749 60 123 2.9E-13 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM460_RS00520 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 SMART SM00749 139 201 1.0E-10 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM460_RS00520 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 Pfam PF04972 BON domain 135 199 1.0E-19 T 29-03-2018 IPR007055 BON domain AM460_RS00520 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 Pfam PF04972 BON domain 55 122 4.7E-20 T 29-03-2018 IPR007055 BON domain AM460_RS16635 c561c444207e579bc13e6e55ba1b8f1a 423 SUPERFAMILY SSF101960 11 420 5.1E-115 T 29-03-2018 AM460_RS16635 c561c444207e579bc13e6e55ba1b8f1a 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 393 4.2E-69 T 29-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM460_RS16635 c561c444207e579bc13e6e55ba1b8f1a 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 409 1.5E-89 T 29-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 PIRSF PIRSF000398 2 254 1.5E-47 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 SUPERFAMILY SSF53335 7 254 6.8E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 TIGRFAM TIGR00571 dam: DNA adenine methylase 6 246 2.8E-34 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 229 6.1E-27 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 Gene3D G3DSA:3.40.50.150 2 254 4.4E-37 T 29-03-2018 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 173 185 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS00410 af8cdbd2dff7481a8637c0d92ef5112a 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 32 46 2.0E-14 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM460_RS00515 982763d7babe3466d3373b9965d13659 59 PIRSF PIRSF036466 7 59 1.5E-20 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM460_RS00515 982763d7babe3466d3373b9965d13659 59 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 7 58 19.041 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM460_RS00515 982763d7babe3466d3373b9965d13659 59 Pfam PF07043 Protein of unknown function (DUF1328) 12 50 2.7E-13 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM460_RS05790 e25a18e4e2d0e0dd36fe4d411dcce164 215 Pfam PF02308 MgtC family 9 136 1.2E-36 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM460_RS05790 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 65 87 5.2E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM460_RS05790 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 12 31 5.2E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM460_RS05790 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 31 49 5.2E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM460_RS05790 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 92 116 5.2E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 29-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 6.6E-84 T 29-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 44.219 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 SUPERFAMILY SSF51246 329 424 7.85E-34 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 SMART SM01209 103 296 1.4E-143 T 29-03-2018 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 SUPERFAMILY SSF56059 104 325 2.12E-70 T 29-03-2018 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.2E-36 T 29-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Gene3D G3DSA:3.40.50.20 2 95 8.9E-38 T 29-03-2018 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Gene3D G3DSA:3.30.470.20 191 329 8.0E-63 T 29-03-2018 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 6.7E-191 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 SUPERFAMILY SSF52440 1 103 1.73E-37 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Gene3D G3DSA:3.30.1490.20 135 189 5.9E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Gene3D G3DSA:3.90.600.10 330 425 3.9E-35 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 3.5E-30 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS03015 b483c555729eaa419b7c95082a6ae80c 429 SMART SM01210 330 424 1.7E-57 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS23480 a1f47d03f3c4765386d7d02e5a88b4dc 400 Gene3D G3DSA:3.40.50.1820 145 400 2.6E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS23480 a1f47d03f3c4765386d7d02e5a88b4dc 400 Gene3D G3DSA:2.60.40.10 3 142 1.4E-46 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS23480 a1f47d03f3c4765386d7d02e5a88b4dc 400 SUPERFAMILY SSF81296 5 150 3.22E-53 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS23480 a1f47d03f3c4765386d7d02e5a88b4dc 400 Pfam PF11806 Domain of unknown function (DUF3327) 29 155 3.6E-45 T 29-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 AM460_RS23480 a1f47d03f3c4765386d7d02e5a88b4dc 400 Pfam PF00756 Putative esterase 172 391 3.3E-46 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM460_RS23480 a1f47d03f3c4765386d7d02e5a88b4dc 400 SUPERFAMILY SSF53474 155 393 1.19E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS14460 fbe8b640d601832d612c66640b6913cb 117 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 63 108 1.0E-5 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM460_RS14460 fbe8b640d601832d612c66640b6913cb 117 Gene3D G3DSA:1.10.10.10 66 117 5.0E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05735 2b4f5dc375d165b36bcd059ce2986a5b 466 SUPERFAMILY SSF53383 6 451 1.16E-132 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS05735 2b4f5dc375d165b36bcd059ce2986a5b 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 29-03-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 AM460_RS05735 2b4f5dc375d165b36bcd059ce2986a5b 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 1.5E-114 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM460_RS05735 2b4f5dc375d165b36bcd059ce2986a5b 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 448 2.8E-209 T 29-03-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 AM460_RS05735 2b4f5dc375d165b36bcd059ce2986a5b 466 Gene3D G3DSA:3.40.640.10 68 329 8.6E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS05735 2b4f5dc375d165b36bcd059ce2986a5b 466 Gene3D G3DSA:3.90.1150.10 330 449 3.3E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS08385 4f802faced0a42acbf9f0bdaa8270424 295 Gene3D G3DSA:3.40.50.10490 134 268 8.5E-23 T 29-03-2018 AM460_RS08385 4f802faced0a42acbf9f0bdaa8270424 295 SUPERFAMILY SSF53697 127 268 8.68E-24 T 29-03-2018 AM460_RS08385 4f802faced0a42acbf9f0bdaa8270424 295 Gene3D G3DSA:1.10.10.10 10 133 4.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08385 4f802faced0a42acbf9f0bdaa8270424 295 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 81 1.3E-9 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM460_RS08385 4f802faced0a42acbf9f0bdaa8270424 295 Pfam PF01380 SIS domain 137 246 5.4E-13 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS08385 4f802faced0a42acbf9f0bdaa8270424 295 SUPERFAMILY SSF46689 14 84 1.65E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS26545 0777eb9711f93b3f718895b2f8319619 384 Pfam PF00589 Phage integrase family 122 275 3.3E-23 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS26545 0777eb9711f93b3f718895b2f8319619 384 Gene3D G3DSA:1.10.443.10 124 293 1.9E-30 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS26545 0777eb9711f93b3f718895b2f8319619 384 SUPERFAMILY SSF56349 9 279 1.67E-54 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS26545 0777eb9711f93b3f718895b2f8319619 384 Gene3D G3DSA:1.10.150.130 6 123 4.1E-13 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS26545 0777eb9711f93b3f718895b2f8319619 384 SUPERFAMILY SSF143100 304 363 7.32E-5 T 29-03-2018 IPR035069 TTHA1013/TTHA0281-like AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 Gene3D G3DSA:3.40.1190.20 101 409 8.1E-75 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 PRINTS PR00990 Ribokinase signature 272 287 2.7E-31 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 PRINTS PR00990 Ribokinase signature 204 217 2.7E-31 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 PRINTS PR00990 Ribokinase signature 132 151 2.7E-31 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 PRINTS PR00990 Ribokinase signature 316 327 2.7E-31 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 PRINTS PR00990 Ribokinase signature 105 126 2.7E-31 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.9E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 Pfam PF00294 pfkB family carbohydrate kinase 102 389 1.5E-65 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 SUPERFAMILY SSF53613 103 389 1.87E-73 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 SMART SM00420 6 58 8.6E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 Hamap MF_01987 Ribokinase [rbsK]. 101 400 21.868 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 SUPERFAMILY SSF46785 4 61 1.43E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 345 358 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.8E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.8E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS26085 9e5be6d99bfd19c45345a6ffea82ee0e 410 Gene3D G3DSA:1.10.10.10 1 73 7.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS11215 03c3b10343e5b1d4d760555d80d7311c 1021 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 656 981 2.8E-86 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM460_RS11215 03c3b10343e5b1d4d760555d80d7311c 1021 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 379 691 0.006 T 29-03-2018 AM460_RS11215 03c3b10343e5b1d4d760555d80d7311c 1021 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 811 885 1.6E-21 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM460_RS11215 03c3b10343e5b1d4d760555d80d7311c 1021 Pfam PF06791 Prophage tail length tape measure protein 228 426 4.4E-51 T 29-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 450 2.0E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 Gene3D G3DSA:3.30.565.10 307 452 1.6E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 449 9.7E-95 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 SUPERFAMILY SSF47384 218 302 8.44E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.9E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.9E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 2.9E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 SUPERFAMILY SSF55874 290 449 2.33E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 SMART SM00388 235 301 2.1E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 SMART SM00387 344 452 2.1E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 299 1.4E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM460_RS14800 5a7674b3c1d89c1c21dd21b81a00fc4f 452 Gene3D G3DSA:1.10.287.130 225 297 6.7E-10 T 29-03-2018 AM460_RS03185 fdb0d509fcabda888f4573fac395de0b 316 SUPERFAMILY SSF52540 10 315 1.49E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03185 fdb0d509fcabda888f4573fac395de0b 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 191.287 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM460_RS03185 fdb0d509fcabda888f4573fac395de0b 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 2.8E-14 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AM460_RS03185 fdb0d509fcabda888f4573fac395de0b 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 3.3E-183 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM460_RS03185 fdb0d509fcabda888f4573fac395de0b 316 PIRSF PIRSF000545 1 316 8.1E-150 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM460_RS03185 fdb0d509fcabda888f4573fac395de0b 316 Gene3D G3DSA:3.40.50.300 9 316 4.5E-55 T 29-03-2018 AM460_RS21150 c2072754c0c3502ab5c3d6b2bb25bad6 112 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 30 107 1.8E-5 T 29-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 AM460_RS00330 c2072754c0c3502ab5c3d6b2bb25bad6 112 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 30 107 1.8E-5 T 29-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 AM460_RS16305 bf4f21b9bc81151d4030bd0ff606345f 295 Gene3D G3DSA:3.40.1440.10 20 115 6.9E-18 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS16305 bf4f21b9bc81151d4030bd0ff606345f 295 SUPERFAMILY SSF82771 34 111 1.44E-10 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS16305 bf4f21b9bc81151d4030bd0ff606345f 295 SMART SM00465 34 112 9.3E-16 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 PIRSF PIRSF001619 1 319 9.5E-141 T 29-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.81 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 Gene3D G3DSA:3.20.20.70 4 315 2.2E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 SUPERFAMILY SSF102114 6 313 2.62E-95 T 29-03-2018 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 SMART SM00876 220 312 6.8E-49 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.1E-20 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 2.3E-125 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 SMART SM00729 43 255 4.3E-43 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS22445 ecbf75df6acdc7918e9a9eed66c72b8d 346 Pfam PF04055 Radical SAM superfamily 50 203 6.4E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS08375 4c76c9a4cd7bac5ad347c663c0fe315b 349 Pfam PF01032 FecCD transport family 37 343 5.6E-78 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS08375 4c76c9a4cd7bac5ad347c663c0fe315b 349 SUPERFAMILY SSF81345 19 344 1.57E-68 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS08375 4c76c9a4cd7bac5ad347c663c0fe315b 349 Gene3D G3DSA:1.10.3470.10 20 349 5.2E-57 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS25430 2a8417f05aa2add8d8a5078865f1ec6c 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 29-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AM460_RS25430 2a8417f05aa2add8d8a5078865f1ec6c 285 Pfam PF01148 Cytidylyltransferase family 4 278 5.5E-71 T 29-03-2018 AM460_RS06670 d846b3446c74769630da84764ee91886 196 Gene3D G3DSA:3.10.50.40 1 164 4.3E-30 T 29-03-2018 AM460_RS06670 d846b3446c74769630da84764ee91886 196 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.6E-9 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM460_RS06670 d846b3446c74769630da84764ee91886 196 SUPERFAMILY SSF54534 2 140 2.75E-33 T 29-03-2018 AM460_RS18115 a61da65b9540e17272a37fb721d41fbf 222 Pfam PF04012 PspA/IM30 family 2 216 1.8E-47 T 29-03-2018 IPR007157 PspA/IM30 AM460_RS18115 a61da65b9540e17272a37fb721d41fbf 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.4E-91 T 29-03-2018 IPR014319 Phage shock protein, PspA AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 1.4E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 Gene3D G3DSA:3.40.30.10 1 101 3.2E-15 T 29-03-2018 AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 SUPERFAMILY SSF47616 76 215 7.14E-49 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 Gene3D G3DSA:1.20.1050.10 102 215 6.1E-33 T 29-03-2018 AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 7.2E-104 T 29-03-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 1.1E-48 T 29-03-2018 IPR007494 Glutaredoxin 2, C-terminal AM460_RS20245 c7aa224648b2c0d69c21c2f6fed97c1d 215 SUPERFAMILY SSF52833 1 78 1.1E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS10060 61ce91ecdcfdc8a8f69bfda9ac325ab2 359 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 318 5.6E-78 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM460_RS10060 61ce91ecdcfdc8a8f69bfda9ac325ab2 359 Pfam PF06996 Type VI secretion, TssG 21 318 7.2E-76 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM460_RS18785 d0d66d52285f391f577d433514627156 132 Gene3D G3DSA:3.10.129.10 1 131 1.3E-32 T 29-03-2018 AM460_RS18785 d0d66d52285f391f577d433514627156 132 Pfam PF03061 Thioesterase superfamily 26 97 7.4E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM460_RS18785 d0d66d52285f391f577d433514627156 132 SUPERFAMILY SSF54637 7 130 2.9E-36 T 29-03-2018 IPR029069 HotDog domain AM460_RS05135 3f6b8e9406e13e58c374f16eadfd6b83 357 Gene3D G3DSA:3.40.50.2000 33 190 1.2E-14 T 29-03-2018 AM460_RS05135 3f6b8e9406e13e58c374f16eadfd6b83 357 Gene3D G3DSA:3.40.50.2000 198 353 2.9E-14 T 29-03-2018 AM460_RS05135 3f6b8e9406e13e58c374f16eadfd6b83 357 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 274 329 1.2E-6 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM460_RS05135 3f6b8e9406e13e58c374f16eadfd6b83 357 SUPERFAMILY SSF53756 45 351 3.77E-35 T 29-03-2018 AM460_RS22205 a4b786f9169f4628d72efb53875174cf 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 1.8E-21 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS22205 a4b786f9169f4628d72efb53875174cf 271 Gene3D G3DSA:3.40.50.1000 1 268 2.7E-35 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22205 a4b786f9169f4628d72efb53875174cf 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.5E-52 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22205 a4b786f9169f4628d72efb53875174cf 271 SUPERFAMILY SSF56784 1 263 6.53E-63 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22205 a4b786f9169f4628d72efb53875174cf 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 7.4E-66 T 29-03-2018 IPR000150 Cof family GO:0016787 AM460_RS22205 a4b786f9169f4628d72efb53875174cf 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 29-03-2018 AM460_RS23325 d45d04ea020297cbde6fca9c035c2ad2 487 PIRSF PIRSF002457 1 487 5.2E-163 T 29-03-2018 IPR030676 Citrate carrier CitT-related AM460_RS23325 d45d04ea020297cbde6fca9c035c2ad2 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 486 4.2E-186 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS23325 d45d04ea020297cbde6fca9c035c2ad2 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 6.7E-173 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 164 1.1E-21 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 Pfam PF08281 Sigma-70, region 4 112 164 6.2E-15 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 SUPERFAMILY SSF88946 12 78 1.41E-13 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 SUPERFAMILY SSF88659 88 164 1.2E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 Gene3D G3DSA:1.10.10.10 92 164 3.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 Pfam PF04542 Sigma-70 region 2 16 81 4.6E-12 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 Gene3D G3DSA:1.10.1740.10 1 85 4.0E-15 T 29-03-2018 AM460_RS01145 950bf3a1043701a72038bd6628bf2e3a 173 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 38 68 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 SMART SM00072 3 187 3.6E-89 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 Pfam PF00625 Guanylate kinase 5 186 1.2E-71 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.30.63.10 49 83 1.6E-28 T 29-03-2018 AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 84 187 1.5E-35 T 29-03-2018 AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 29-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.554 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 SUPERFAMILY SSF52540 3 189 4.01E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 9.6E-77 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM460_RS05010 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 3 48 0.0011 T 29-03-2018 AM460_RS26720 345122f9890e9ea45904b2f30722d545 763 Gene3D G3DSA:3.40.50.300 89 586 3.5E-13 T 29-03-2018 AM460_RS26720 345122f9890e9ea45904b2f30722d545 763 SUPERFAMILY SSF52540 125 584 2.23E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02715 cf9499f77037cff40f71e36130649765 344 Gene3D G3DSA:1.10.10.60 4 22 0.001 T 29-03-2018 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 SUPERFAMILY SSF47413 9 68 7.51E-19 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 Gene3D G3DSA:3.40.50.2300 187 322 1.5E-37 T 29-03-2018 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 SUPERFAMILY SSF53822 70 340 3.62E-69 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS02715 cf9499f77037cff40f71e36130649765 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 29-03-2018 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 Gene3D G3DSA:3.40.50.2300 65 186 4.9E-33 T 29-03-2018 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 6.2E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 2.2E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 2.2E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 Pfam PF13377 Periplasmic binding protein-like domain 180 339 2.6E-34 T 29-03-2018 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 Gene3D G3DSA:1.10.260.40 23 64 1.8E-22 T 29-03-2018 AM460_RS02715 cf9499f77037cff40f71e36130649765 344 SMART SM00354 10 80 1.8E-29 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM460_RS00390 533f0ef8635af723e55bfd0d0571dad5 116 Pfam PF13272 Putative 2/3 transmembrane domain holin 16 116 8.7E-40 T 29-03-2018 IPR025140 Putative 2/3 transmembrane domain holin AM460_RS20275 e8a7f3a1191b80e840fc13ba4a5b87ef 46 ProDom PD049682 YCEO INNER MEMBRANE STY1197 10 46 4.0E-13 T 29-03-2018 IPR024494 Protein of unknown function DUF2770 AM460_RS20275 e8a7f3a1191b80e840fc13ba4a5b87ef 46 Pfam PF10968 Protein of unknown function (DUF2770) 10 45 4.2E-20 T 29-03-2018 IPR024494 Protein of unknown function DUF2770 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Gene3D G3DSA:3.40.47.10 265 389 2.7E-34 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 PIRSF PIRSF000429 1 393 2.4E-131 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Pfam PF02803 Thiolase, C-terminal domain 270 391 3.1E-52 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Pfam PF00108 Thiolase, N-terminal domain 4 261 8.7E-103 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Gene3D G3DSA:3.40.47.10 1 264 1.9E-58 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.0E-142 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 SUPERFAMILY SSF53901 271 391 1.04E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS09880 8aa52037f0d9dcfa9e55ff98916f9d1f 393 SUPERFAMILY SSF53901 3 269 3.29E-84 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS11335 1b64f96e17b3232b18d4f8cfe5373512 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.165 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11335 1b64f96e17b3232b18d4f8cfe5373512 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 29-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS11335 1b64f96e17b3232b18d4f8cfe5373512 82 Gene3D G3DSA:3.30.1320.10 1 79 4.6E-33 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11335 1b64f96e17b3232b18d4f8cfe5373512 82 SUPERFAMILY SSF54565 1 76 5.89E-29 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11335 1b64f96e17b3232b18d4f8cfe5373512 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.3E-28 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11335 1b64f96e17b3232b18d4f8cfe5373512 82 Pfam PF00886 Ribosomal protein S16 8 68 2.5E-24 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS15685 418a9ff86531ee4703f6667318bc4d73 261 Gene3D G3DSA:1.10.3470.10 2 261 5.1E-27 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS15685 418a9ff86531ee4703f6667318bc4d73 261 Pfam PF00950 ABC 3 transport family 1 257 6.8E-90 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM460_RS15685 418a9ff86531ee4703f6667318bc4d73 261 SUPERFAMILY SSF81345 3 257 7.19E-42 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS03540 653860f5850df5e96b887764a592736f 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 1.6E-114 T 29-03-2018 AM460_RS03540 653860f5850df5e96b887764a592736f 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 343 6.8E-218 T 29-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 AM460_RS03540 653860f5850df5e96b887764a592736f 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 46.512 T 29-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 AM460_RS12155 64e922bc798c99b361b60f719a6c1d2a 350 Pfam PF12833 Helix-turn-helix domain 262 342 6.0E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS12155 64e922bc798c99b361b60f719a6c1d2a 350 Gene3D G3DSA:1.10.10.60 292 349 1.3E-4 T 29-03-2018 AM460_RS12155 64e922bc798c99b361b60f719a6c1d2a 350 SUPERFAMILY SSF46689 240 290 4.3E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS12155 64e922bc798c99b361b60f719a6c1d2a 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS12155 64e922bc798c99b361b60f719a6c1d2a 350 SMART SM00342 256 342 2.9E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS12155 64e922bc798c99b361b60f719a6c1d2a 350 Gene3D G3DSA:1.10.10.60 235 291 4.8E-12 T 29-03-2018 AM460_RS13705 bd4a08d67c52714fec8b4e9aec6326ef 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 1.9E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS13705 bd4a08d67c52714fec8b4e9aec6326ef 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 1.9E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS13705 bd4a08d67c52714fec8b4e9aec6326ef 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 1.9E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM460_RS13705 bd4a08d67c52714fec8b4e9aec6326ef 310 SUPERFAMILY SSF56601 3 277 1.1E-61 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS13705 bd4a08d67c52714fec8b4e9aec6326ef 310 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 261 2.8E-89 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM460_RS13705 bd4a08d67c52714fec8b4e9aec6326ef 310 Gene3D G3DSA:3.40.710.10 16 310 1.3E-44 T 29-03-2018 AM460_RS20115 4c0da28cfac3276414ddb92eade91f86 356 Pfam PF02504 Fatty acid synthesis protein 5 331 7.5E-130 T 29-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AM460_RS20115 4c0da28cfac3276414ddb92eade91f86 356 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 345 8.9E-149 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM460_RS20115 4c0da28cfac3276414ddb92eade91f86 356 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 142.289 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM460_RS20115 4c0da28cfac3276414ddb92eade91f86 356 Gene3D G3DSA:3.40.718.10 1 340 2.4E-116 T 29-03-2018 AM460_RS20115 4c0da28cfac3276414ddb92eade91f86 356 SUPERFAMILY SSF53659 4 340 1.03E-103 T 29-03-2018 AM460_RS20115 4c0da28cfac3276414ddb92eade91f86 356 PIRSF PIRSF002465 2 343 2.8E-128 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM460_RS02455 288203c277ca690fe20a0076fbdc3cd1 522 Gene3D G3DSA:3.10.105.10 291 493 3.7E-35 T 29-03-2018 AM460_RS02455 288203c277ca690fe20a0076fbdc3cd1 522 SUPERFAMILY SSF53850 21 513 4.21E-96 T 29-03-2018 AM460_RS02455 288203c277ca690fe20a0076fbdc3cd1 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 1.6E-65 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS02455 288203c277ca690fe20a0076fbdc3cd1 522 PIRSF PIRSF002741 11 519 6.4E-61 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM460_RS02455 288203c277ca690fe20a0076fbdc3cd1 522 Gene3D G3DSA:3.90.76.10 36 191 1.4E-22 T 29-03-2018 AM460_RS02455 288203c277ca690fe20a0076fbdc3cd1 522 Gene3D G3DSA:3.40.190.10 194 290 6.6E-17 T 29-03-2018 AM460_RS25185 99472ffcb58487c5aaf42e057c101ab1 246 Pfam PF03734 L,D-transpeptidase catalytic domain 45 159 2.5E-6 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM460_RS25185 99472ffcb58487c5aaf42e057c101ab1 246 SUPERFAMILY SSF141523 42 159 1.83E-10 T 29-03-2018 AM460_RS25185 99472ffcb58487c5aaf42e057c101ab1 246 Gene3D G3DSA:2.40.440.10 39 174 3.9E-8 T 29-03-2018 AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 SUPERFAMILY SSF51735 4 243 1.14E-87 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 Gene3D G3DSA:3.40.50.720 1 50 1.2E-11 T 29-03-2018 AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 Gene3D G3DSA:3.40.50.720 51 244 9.3E-67 T 29-03-2018 AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.2E-102 T 29-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.2E-68 T 29-03-2018 AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.1E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.1E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.1E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.1E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.1E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS20100 c22a193608c9d8f2f5ee499e05b45f4b 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 9.2E-6 T 29-03-2018 AM460_RS08630 7ff8fc71f67de5c0dc815ff423f4447a 237 Gene3D G3DSA:3.40.50.300 3 30 6.9E-5 T 29-03-2018 AM460_RS08630 7ff8fc71f67de5c0dc815ff423f4447a 237 Gene3D G3DSA:3.40.50.300 31 235 3.9E-10 T 29-03-2018 AM460_RS08630 7ff8fc71f67de5c0dc815ff423f4447a 237 SUPERFAMILY SSF52540 14 127 1.16E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.9E-11 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.9E-11 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 1.9E-11 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.9E-11 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 2.7E-99 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 2.9E-239 T 29-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.9E-23 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 3.6E-55 T 29-03-2018 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 3.6E-55 T 29-03-2018 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 3.6E-55 T 29-03-2018 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 3.6E-55 T 29-03-2018 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 3.6E-55 T 29-03-2018 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 3.6E-55 T 29-03-2018 AM460_RS12950 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 3.6E-55 T 29-03-2018 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 Gene3D G3DSA:3.20.20.60 1 417 2.4E-154 T 29-03-2018 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 6.2E-94 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 3.7E-124 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 SUPERFAMILY SSF51621 4 417 7.18E-157 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 Pfam PF00463 Isocitrate lyase family 8 255 6.2E-61 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 Pfam PF00463 Isocitrate lyase family 256 434 2.0E-49 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AM460_RS02960 f995a4b2b1deaa2b2ef3164261dcedc9 434 PIRSF PIRSF001362 1 434 7.8E-229 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM460_RS05815 dd621377f9013e5a6e9310b2b2f06ce9 445 Gene3D G3DSA:3.20.20.70 36 375 2.9E-39 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS05815 dd621377f9013e5a6e9310b2b2f06ce9 445 SMART SM00729 57 279 3.1E-52 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS05815 dd621377f9013e5a6e9310b2b2f06ce9 445 SUPERFAMILY SSF102114 44 428 2.62E-89 T 29-03-2018 AM460_RS05815 dd621377f9013e5a6e9310b2b2f06ce9 445 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 19 432 9.5E-172 T 29-03-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW AM460_RS05815 dd621377f9013e5a6e9310b2b2f06ce9 445 Pfam PF04055 Radical SAM superfamily 63 230 6.7E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS07355 8e3bdd32ca395aecd3d400cf127443f6 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 442 1.5E-192 T 29-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 AM460_RS07355 8e3bdd32ca395aecd3d400cf127443f6 496 Pfam PF07690 Major Facilitator Superfamily 26 287 1.6E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS07355 8e3bdd32ca395aecd3d400cf127443f6 496 SUPERFAMILY SSF103473 267 452 1.57E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS07355 8e3bdd32ca395aecd3d400cf127443f6 496 SUPERFAMILY SSF103473 8 203 1.57E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS07355 8e3bdd32ca395aecd3d400cf127443f6 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 55.855 T 29-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 AM460_RS07355 8e3bdd32ca395aecd3d400cf127443f6 496 Gene3D G3DSA:1.20.1250.20 267 468 6.8E-19 T 29-03-2018 AM460_RS07355 8e3bdd32ca395aecd3d400cf127443f6 496 Gene3D G3DSA:1.20.1250.20 11 208 1.6E-34 T 29-03-2018 AM460_RS11455 c82ff1128c64505031ea36a232065522 107 PIRSF PIRSF034456 1 106 1.4E-59 T 29-03-2018 IPR017028 Uncharacterised conserved protein UCP034456 AM460_RS11455 c82ff1128c64505031ea36a232065522 107 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 99 7.7E-10 T 29-03-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein AM460_RS01065 d0ea1eb3d4ee6a54756a46724c3593f3 86 Gene3D G3DSA:1.10.10.10 36 86 1.4E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01065 d0ea1eb3d4ee6a54756a46724c3593f3 86 Pfam PF12728 Helix-turn-helix domain 41 80 1.5E-7 T 29-03-2018 AM460_RS02355 5c580f8adcea5572930ab1e0dd7387d9 226 SMART SM00382 33 226 1.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02355 5c580f8adcea5572930ab1e0dd7387d9 226 Pfam PF00005 ABC transporter 24 178 3.8E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02355 5c580f8adcea5572930ab1e0dd7387d9 226 SUPERFAMILY SSF52540 2 222 7.51E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02355 5c580f8adcea5572930ab1e0dd7387d9 226 Gene3D G3DSA:3.40.50.300 1 223 9.0E-45 T 29-03-2018 AM460_RS02355 5c580f8adcea5572930ab1e0dd7387d9 226 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02355 5c580f8adcea5572930ab1e0dd7387d9 226 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 218 3.7E-112 T 29-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS12715 00d6b082b1021fdcd98c3994000e09a1 668 SUPERFAMILY SSF51905 267 544 1.47E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS12715 00d6b082b1021fdcd98c3994000e09a1 668 Pfam PF01266 FAD dependent oxidoreductase 267 632 2.0E-47 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM460_RS12715 00d6b082b1021fdcd98c3994000e09a1 668 Gene3D G3DSA:3.40.50.150 9 249 1.2E-85 T 29-03-2018 AM460_RS12715 00d6b082b1021fdcd98c3994000e09a1 668 Gene3D G3DSA:3.50.50.60 254 668 2.2E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS12715 00d6b082b1021fdcd98c3994000e09a1 668 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 4.8E-51 T 29-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AM460_RS12715 00d6b082b1021fdcd98c3994000e09a1 668 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 657 28.5 T 29-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AM460_RS12715 00d6b082b1021fdcd98c3994000e09a1 668 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 662 9.5E-156 T 29-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 AM460_RS03960 a30cac3a8a96d9eef89cbc3cc12cd1e5 269 Gene3D G3DSA:3.40.50.1820 26 265 1.1E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS03960 a30cac3a8a96d9eef89cbc3cc12cd1e5 269 Pfam PF01738 Dienelactone hydrolase family 42 265 1.6E-78 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM460_RS03960 a30cac3a8a96d9eef89cbc3cc12cd1e5 269 SUPERFAMILY SSF53474 33 264 2.06E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24290 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 3.1E-45 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 AM460_RS24290 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 SUPERFAMILY SSF48013 3 134 2.35E-42 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM460_RS24290 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Pfam PF01029 NusB family 7 131 5.1E-35 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM460_RS24290 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Gene3D G3DSA:1.10.940.10 1 138 1.4E-42 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM460_RS24290 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.572 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 Gene3D G3DSA:3.40.1160.10 1 315 1.3E-45 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 SUPERFAMILY SSF53633 3 313 2.88E-72 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PIRSF PIRSF000723 1 315 4.2E-131 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PRINTS PR01469 Bacterial carbamate kinase signature 77 95 3.5E-60 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PRINTS PR01469 Bacterial carbamate kinase signature 215 230 3.5E-60 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 3.5E-60 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PRINTS PR01469 Bacterial carbamate kinase signature 270 285 3.5E-60 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 3.5E-60 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 3.5E-60 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 3.5E-60 T 29-03-2018 AM460_RS24695 5d6aa0a660d6c6d44762f86828cc030b 316 Pfam PF00696 Amino acid kinase family 4 296 1.0E-24 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS09980 848a01fcabd581659d2cda5cd595ba4e 135 Pfam PF10713 Protein of unknown function (DUF2509) 15 132 1.1E-32 T 29-03-2018 IPR019652 Protein of unknown function DUF2509 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 16 300 41.885 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 19 284 2.3E-47 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 SUPERFAMILY SSF52374 16 296 9.29E-89 T 29-03-2018 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 31 6.8E-14 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 6.8E-14 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 44 6.8E-14 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 61 6.8E-14 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 6.8E-14 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 Gene3D G3DSA:3.40.50.620 11 149 1.5E-33 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 Gene3D G3DSA:3.40.50.620 150 308 1.2E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS25605 177ee802c47130a2d1fb6b91636efe65 308 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 16 281 5.5E-114 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 SMART SM01134 73 233 8.1E-68 T 29-03-2018 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 SUPERFAMILY SSF100950 76 235 3.87E-28 T 29-03-2018 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 Pfam PF00455 DeoR C terminal sensor domain 76 231 5.2E-51 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 Gene3D G3DSA:1.10.10.10 3 67 2.0E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 SUPERFAMILY SSF46785 5 58 5.94E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 SMART SM00420 6 58 2.9E-25 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.2E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 Gene3D G3DSA:3.40.50.1360 68 230 1.4E-34 T 29-03-2018 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.8E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS10590 7234ca7aa70841a9cbdd07be25f5dc03 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.8E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM460_RS09420 33a6fa1739cc291954fc833a373be06f 165 Pfam PF10263 SprT-like family 20 118 2.1E-17 T 29-03-2018 IPR006640 SprT-like AM460_RS09420 33a6fa1739cc291954fc833a373be06f 165 SMART SM00731 16 165 2.1E-62 T 29-03-2018 IPR006640 SprT-like AM460_RS09420 33a6fa1739cc291954fc833a373be06f 165 Pfam PF17283 SprT-like zinc ribbon domain 126 163 1.3E-9 T 29-03-2018 IPR035240 SprT-like, zinc ribbon domain AM460_RS09420 33a6fa1739cc291954fc833a373be06f 165 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.483 T 29-03-2018 IPR023483 Uncharacterised protein family SprT AM460_RS12665 d0e96e06ef313f486e7a2763d8c9cd86 159 Pfam PF00419 Fimbrial protein 23 159 1.1E-14 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12665 d0e96e06ef313f486e7a2763d8c9cd86 159 Gene3D G3DSA:2.60.40.1090 21 159 1.1E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12665 d0e96e06ef313f486e7a2763d8c9cd86 159 SUPERFAMILY SSF49401 32 159 3.28E-24 T 29-03-2018 IPR008966 Adhesion domain AM460_RS00415 a18326bcf54f00c6ded811173adf673f 112 SMART SM00530 5 59 5.2E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS00415 a18326bcf54f00c6ded811173adf673f 112 Gene3D G3DSA:1.10.260.40 1 101 2.0E-16 T 29-03-2018 AM460_RS00415 a18326bcf54f00c6ded811173adf673f 112 Pfam PF01381 Helix-turn-helix 6 51 6.8E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS00415 a18326bcf54f00c6ded811173adf673f 112 SUPERFAMILY SSF47413 1 62 6.14E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 Gene3D G3DSA:3.90.1240.10 126 298 7.5E-28 T 29-03-2018 AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 SUPERFAMILY SSF51182 21 94 7.12E-10 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 SUPERFAMILY SSF46689 232 284 2.55E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 Pfam PF12833 Helix-turn-helix domain 202 281 1.5E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 SMART SM00342 196 279 1.2E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 Gene3D G3DSA:2.60.120.10 6 125 5.4E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 Pfam PF02311 AraC-like ligand binding domain 27 157 4.7E-12 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS16555 9fbd7e45b112c0669de5a6d3732b46a6 303 SUPERFAMILY SSF46689 179 230 3.9E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS11180 c78c9f9ef2c59f32bbbb33b307314982 122 PIRSF PIRSF030771 16 122 2.9E-62 T 29-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 AM460_RS11180 c78c9f9ef2c59f32bbbb33b307314982 122 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 18 120 1.6E-27 T 29-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 527 6.6E-283 T 29-03-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 Gene3D G3DSA:3.40.50.980 27 190 1.4E-25 T 29-03-2018 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 Gene3D G3DSA:3.30.300.30 432 536 4.0E-23 T 29-03-2018 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 Gene3D G3DSA:2.30.38.10 356 431 2.3E-20 T 29-03-2018 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 Gene3D G3DSA:3.40.50.980 191 355 4.0E-30 T 29-03-2018 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 SUPERFAMILY SSF56801 5 532 6.93E-125 T 29-03-2018 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 Pfam PF00501 AMP-binding enzyme 37 437 2.2E-76 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM460_RS23425 91734dd98e745746fbb4b6683562bfd0 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 520 3.4E-12 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 29-03-2018 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 29-03-2018 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.5E-150 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 8 172 4.3E-42 T 29-03-2018 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 256 321 1.8E-8 T 29-03-2018 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 190 255 8.8E-28 T 29-03-2018 AM460_RS07225 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM460_RS11635 b125e08e13a7e5b04a2ec52c549fd067 237 Pfam PF13942 YfhG lipoprotein 45 217 7.6E-77 T 29-03-2018 IPR025262 Quorum-sensing regulator protein G AM460_RS11635 b125e08e13a7e5b04a2ec52c549fd067 237 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 27 218 1.0E-92 T 29-03-2018 AM460_RS27990 adaf0082c81a1ab5bddbca6dc1a67607 248 Pfam PF05857 TraX protein 32 246 2.3E-55 T 29-03-2018 IPR008875 TraX AM460_RS27990 adaf0082c81a1ab5bddbca6dc1a67607 248 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 25 247 3.7E-126 T 29-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX AM460_RS23015 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 73 209 1.3E-21 T 29-03-2018 AM460_RS23015 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 210 402 4.4E-46 T 29-03-2018 AM460_RS23015 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF46785 14 79 5.25E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS23015 958ba29334f789f470d07397b634d739 406 Pfam PF00480 ROK family 89 392 2.4E-102 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS23015 958ba29334f789f470d07397b634d739 406 Pfam PF01047 MarR family 25 63 5.6E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS23015 958ba29334f789f470d07397b634d739 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS23015 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF53067 88 394 8.64E-56 T 29-03-2018 AM460_RS23015 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:1.10.10.10 13 72 1.5E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 SUPERFAMILY SSF53720 4 482 1.11E-171 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 Gene3D G3DSA:3.40.309.10 268 465 5.5E-70 T 29-03-2018 AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 Gene3D G3DSA:3.40.605.10 1 267 9.2E-106 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 Pfam PF00171 Aldehyde dehydrogenase family 17 479 5.4E-178 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.661 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 5.6E-246 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM460_RS24770 a13298b6569c8b61ca4cb07b3691449e 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 SUPERFAMILY SSF52218 60 208 8.57E-44 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00369 Flavodoxin signature 169 188 5.0E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00369 Flavodoxin signature 113 124 5.0E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00369 Flavodoxin signature 145 155 5.0E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00369 Flavodoxin signature 65 78 5.0E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 SUPERFAMILY SSF52343 444 599 2.23E-52 T 29-03-2018 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 SUPERFAMILY SSF63380 227 446 4.16E-64 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 Gene3D G3DSA:2.40.30.10 221 438 1.4E-46 T 29-03-2018 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PIRSF PIRSF000207 1 599 1.1E-283 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 Pfam PF00667 FAD binding domain 230 424 1.0E-25 T 29-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 Gene3D G3DSA:3.40.50.80 442 598 1.1E-36 T 29-03-2018 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 4.1E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 9.7E-290 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 Gene3D G3DSA:3.40.50.360 47 220 3.9E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 6.1E-22 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 Pfam PF00258 Flavodoxin 66 196 4.2E-32 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM460_RS10465 64c1125379dec6224f5c5f40b11c7c65 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 53.041 T 29-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM460_RS08420 08a9b1348813752b10bb807c80c4b69b 130 Gene3D G3DSA:2.40.50.200 22 130 1.7E-41 T 29-03-2018 AM460_RS08420 08a9b1348813752b10bb807c80c4b69b 130 SUPERFAMILY SSF101756 31 127 1.57E-36 T 29-03-2018 IPR005220 Bacterial OB-fold AM460_RS08420 08a9b1348813752b10bb807c80c4b69b 130 Pfam PF04076 Bacterial OB fold (BOF) protein 25 127 1.8E-47 T 29-03-2018 IPR005220 Bacterial OB-fold AM460_RS08420 08a9b1348813752b10bb807c80c4b69b 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 2.2E-66 T 29-03-2018 IPR016052 Bacteriophage 933W, L0136 AM460_RS12290 02045c8860c0255d9d2188a3e78911c0 254 Gene3D G3DSA:2.40.230.20 23 246 2.2E-24 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS12290 02045c8860c0255d9d2188a3e78911c0 254 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 254 4.9E-39 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS12290 02045c8860c0255d9d2188a3e78911c0 254 SUPERFAMILY SSF111364 26 254 3.79E-43 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 PIRSF PIRSF000114 1 336 2.2E-101 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.955 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF48179 184 335 8.16E-58 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:1.10.1040.10 193 339 5.2E-54 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.7E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.7E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.7E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.7E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.7E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.7E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF51735 8 182 4.4E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 5.1E-53 T 29-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:3.40.50.720 1 181 1.1E-39 T 29-03-2018 AM460_RS05210 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 2.9E-50 T 29-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM460_RS11160 ba09defc8f59c6f14cc250d66b13579d 700 Pfam PF05876 Phage terminase large subunit (GpA) 34 644 4.3E-176 T 29-03-2018 IPR008866 Bacteriophage lambda, GpA AM460_RS12135 88cbdea71ebba929ed91a276a20d6a80 453 Gene3D G3DSA:1.10.220.70 56 140 3.0E-30 T 29-03-2018 AM460_RS12135 88cbdea71ebba929ed91a276a20d6a80 453 Gene3D G3DSA:2.30.170.30 1 53 2.0E-26 T 29-03-2018 AM460_RS12135 88cbdea71ebba929ed91a276a20d6a80 453 PIRSF PIRSF018788 1 453 1.0E-232 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM460_RS12135 88cbdea71ebba929ed91a276a20d6a80 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 2.4E-202 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM460_RS12135 88cbdea71ebba929ed91a276a20d6a80 453 Gene3D G3DSA:3.20.20.70 143 449 1.4E-152 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS17140 3a809d5e5d4e1ef96508538f7b3639ad 204 Gene3D G3DSA:1.10.3480.10 1 204 1.0E-56 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS17140 3a809d5e5d4e1ef96508538f7b3639ad 204 PIRSF PIRSF004690 2 204 8.9E-63 T 29-03-2018 IPR026269 Tat proofreading chaperone DmsD-type AM460_RS17140 3a809d5e5d4e1ef96508538f7b3639ad 204 SUPERFAMILY SSF89155 3 200 1.07E-56 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS17140 3a809d5e5d4e1ef96508538f7b3639ad 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 5 204 41.473 T 29-03-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 AM460_RS17140 3a809d5e5d4e1ef96508538f7b3639ad 204 Pfam PF02613 Nitrate reductase delta subunit 52 163 2.5E-19 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 Pfam PF03466 LysR substrate binding domain 92 293 5.0E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 Gene3D G3DSA:1.10.10.10 4 95 7.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 Gene3D G3DSA:3.40.190.10 184 266 2.9E-22 T 29-03-2018 AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 Gene3D G3DSA:3.40.190.10 96 183 2.6E-22 T 29-03-2018 AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 SUPERFAMILY SSF46785 4 114 2.81E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09905 f41308d630a1856fc245c85cd236fcee 311 SUPERFAMILY SSF53850 93 294 9.77E-44 T 29-03-2018 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 7.9E-99 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 SUPERFAMILY SSF55604 454 525 2.35E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 Gene3D G3DSA:3.30.1360.60 451 525 1.5E-26 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 3.1E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 2.3E-16 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 524 3.0E-257 T 29-03-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.208|MetaCyc: PWY-6619 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 2.1E-87 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS16975 0db732e926fed65d4ee9a7155e43199c 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS21190 1077f46ff94ee210a2d376ce2ad83763 52 Pfam PF06528 Phage P2 GpE 14 46 3.1E-5 T 29-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 AM460_RS00290 1077f46ff94ee210a2d376ce2ad83763 52 Pfam PF06528 Phage P2 GpE 14 46 3.1E-5 T 29-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 AM460_RS23390 95856758bc910f75b955633a0b386897 65 Pfam PF04328 Selenoprotein, putative 5 65 1.5E-30 T 29-03-2018 IPR007423 Selenoprotein, putative AM460_RS17320 0f1c9124ccd94dddf7b6bf66c8897711 119 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 114 5.0E-53 T 29-03-2018 IPR020378 Protein of unknown function DUF4186 AM460_RS17320 0f1c9124ccd94dddf7b6bf66c8897711 119 Pfam PF13811 Domain of unknown function (DUF4186) 7 112 2.2E-51 T 29-03-2018 IPR020378 Protein of unknown function DUF4186 AM460_RS15560 308c2c704e7f4631f2bcb6223796b8cb 129 Gene3D G3DSA:3.40.50.2300 1 129 1.0E-35 T 29-03-2018 AM460_RS15560 308c2c704e7f4631f2bcb6223796b8cb 129 SMART SM00448 6 120 8.9E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS15560 308c2c704e7f4631f2bcb6223796b8cb 129 SUPERFAMILY SSF52172 5 125 1.85E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS15560 308c2c704e7f4631f2bcb6223796b8cb 129 Pfam PF00072 Response regulator receiver domain 9 120 6.2E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS00435 8fa5917e8c04380dfefaf49d3edd9a65 589 Pfam PF00665 Integrase core domain 152 298 1.0E-13 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS00435 8fa5917e8c04380dfefaf49d3edd9a65 589 SUPERFAMILY SSF53098 193 335 7.81E-15 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS00435 8fa5917e8c04380dfefaf49d3edd9a65 589 SUPERFAMILY SSF53098 149 163 7.81E-15 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS00435 8fa5917e8c04380dfefaf49d3edd9a65 589 Gene3D G3DSA:3.30.420.10 146 355 5.4E-29 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS00435 8fa5917e8c04380dfefaf49d3edd9a65 589 Gene3D G3DSA:1.10.10.60 3 50 6.0E-4 T 29-03-2018 AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 3.1E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 SUPERFAMILY SSF55594 1 87 8.5E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.0E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.0E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.0E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 7.3E-30 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS05965 5f81585b8ee7a4529f45faa1eb6b4afb 89 Gene3D G3DSA:3.30.1340.10 1 87 1.2E-30 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM460_RS03610 ed29993cf859e7bc56aba9437df4de6f 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 3.4E-22 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM460_RS03610 ed29993cf859e7bc56aba9437df4de6f 211 SUPERFAMILY SSF81342 4 205 9.28E-55 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM460_RS03610 ed29993cf859e7bc56aba9437df4de6f 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 3.5E-66 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AM460_RS03610 ed29993cf859e7bc56aba9437df4de6f 211 Gene3D G3DSA:1.20.950.20 1 211 2.0E-53 T 29-03-2018 AM460_RS04560 35bab65849b37f27d224829abaa874fa 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 304 1.9E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS04560 35bab65849b37f27d224829abaa874fa 319 SUPERFAMILY SSF161098 27 303 1.3E-32 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS04560 35bab65849b37f27d224829abaa874fa 319 Gene3D G3DSA:1.10.3720.10 12 306 1.3E-31 T 29-03-2018 AM460_RS04560 35bab65849b37f27d224829abaa874fa 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.2E-92 T 29-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 3.6E-64 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 29-03-2018 AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 29-03-2018 AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 Gene3D G3DSA:3.40.50.1000 1 115 4.9E-19 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 2.5E-21 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 SUPERFAMILY SSF56784 1 271 1.63E-63 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 Gene3D G3DSA:3.40.50.1000 138 271 1.5E-20 T 29-03-2018 IPR023214 HAD-like domain AM460_RS22490 0d48b3bfa820e52cc2de5f51e0cfc1eb 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 8.4E-73 T 29-03-2018 IPR000150 Cof family GO:0016787 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 SMART SM00562 3 140 5.3E-86 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 Gene3D G3DSA:3.30.70.141 2 142 6.3E-53 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.5E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.5E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.5E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.5E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.5E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 29-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 6.8E-54 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.662 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS11805 73cf79dad8bc21fd8c65de28036a0ca3 143 SUPERFAMILY SSF54919 1 141 3.8E-58 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS19885 307e4dafc622b419abd71db1a90ceebe 153 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS19885 307e4dafc622b419abd71db1a90ceebe 153 SUPERFAMILY SSF55811 5 152 1.14E-30 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS19885 307e4dafc622b419abd71db1a90ceebe 153 Gene3D G3DSA:3.90.79.10 1 146 2.3E-31 T 29-03-2018 AM460_RS19885 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 31 45 8.1E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS19885 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 45 60 8.1E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM460_RS19885 307e4dafc622b419abd71db1a90ceebe 153 Pfam PF00293 NUDIX domain 4 114 8.2E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS14870 e370165aaa254b4e58cdf83b6cc0b351 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 1.4E-43 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS14870 e370165aaa254b4e58cdf83b6cc0b351 271 Gene3D G3DSA:3.30.980.20 94 183 8.5E-34 T 29-03-2018 AM460_RS14870 e370165aaa254b4e58cdf83b6cc0b351 271 TIGRFAM TIGR02463 MPGP_rel: mannosyl-3-phosphoglycerate phosphatase homolog 9 232 5.4E-98 T 29-03-2018 AM460_RS14870 e370165aaa254b4e58cdf83b6cc0b351 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 232 4.5E-12 T 29-03-2018 IPR023214 HAD-like domain AM460_RS14870 e370165aaa254b4e58cdf83b6cc0b351 271 Hamap MF_00617 Mannosyl-3-phosphoglycerate phosphatase [mngB]. 6 253 40.514 T 29-03-2018 IPR012815 Mannosyl-3-phosphoglycerate phosphatase GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 AM460_RS14870 e370165aaa254b4e58cdf83b6cc0b351 271 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 268 4.9E-100 T 29-03-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 AM460_RS14870 e370165aaa254b4e58cdf83b6cc0b351 271 SUPERFAMILY SSF56784 6 232 9.45E-47 T 29-03-2018 IPR023214 HAD-like domain AM460_RS10905 cbccb961afca93e638e9cce11513f3c7 319 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 1.7E-84 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10905 cbccb961afca93e638e9cce11513f3c7 319 PIRSF PIRSF000355 2 316 1.0E-78 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10905 cbccb961afca93e638e9cce11513f3c7 319 SUPERFAMILY SSF47240 6 319 2.03E-102 T 29-03-2018 IPR009078 Ferritin-like superfamily AM460_RS10905 cbccb961afca93e638e9cce11513f3c7 319 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM460_RS10905 cbccb961afca93e638e9cce11513f3c7 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 7 319 1.3E-143 T 29-03-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM460_RS10905 cbccb961afca93e638e9cce11513f3c7 319 Gene3D G3DSA:1.10.620.20 2 287 7.0E-75 T 29-03-2018 AM460_RS24700 8129a4ac3a0d168837767255c022cdae 472 Gene3D G3DSA:3.90.1700.10 305 466 2.0E-70 T 29-03-2018 AM460_RS24700 8129a4ac3a0d168837767255c022cdae 472 Pfam PF06545 Protein of unknown function (DUF1116) 143 357 6.7E-88 T 29-03-2018 IPR009499 Protein of unknown function DUF1116 AM460_RS24700 8129a4ac3a0d168837767255c022cdae 472 Gene3D G3DSA:3.90.1710.10 161 302 2.8E-58 T 29-03-2018 AM460_RS24700 8129a4ac3a0d168837767255c022cdae 472 Gene3D G3DSA:1.10.10.660 96 160 7.7E-33 T 29-03-2018 IPR024033 Uncharacterised domain, YlbE AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 SUPERFAMILY SSF52540 19 257 2.73E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 Gene3D G3DSA:2.40.50.140 304 365 1.6E-6 T 29-03-2018 AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 Gene3D G3DSA:3.40.50.300 16 303 1.8E-77 T 29-03-2018 AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 4.9E-155 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 Pfam PF00005 ABC transporter 36 177 8.9E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 SUPERFAMILY SSF50331 252 375 6.46E-17 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 SMART SM00382 44 227 3.6E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22025 41503093d1ec64b9a75bc715250c7308 377 Pfam PF08402 TOBE domain 295 375 3.2E-19 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM460_RS25160 5b26dba3b6baf496bc8899869747774b 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 18 249 1.4E-52 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AM460_RS25160 5b26dba3b6baf496bc8899869747774b 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 3.0E-20 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS25160 5b26dba3b6baf496bc8899869747774b 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.0E-20 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS25160 5b26dba3b6baf496bc8899869747774b 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 3.0E-20 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS25160 5b26dba3b6baf496bc8899869747774b 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 3.0E-20 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS25160 5b26dba3b6baf496bc8899869747774b 260 Pfam PF01311 Bacterial export proteins, family 1 16 244 8.1E-58 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM460_RS07945 e90a52c8c6e637fa4aa5c62101847e91 99 Pfam PF13997 YqjK-like protein 14 86 1.5E-26 T 29-03-2018 IPR025612 YqjK-like protein AM460_RS12165 c0103b782706c133ae4bf7e776ae772e 289 SUPERFAMILY SSF53187 200 277 7.85E-55 T 29-03-2018 AM460_RS12165 c0103b782706c133ae4bf7e776ae772e 289 SUPERFAMILY SSF53187 57 152 7.85E-55 T 29-03-2018 AM460_RS12165 c0103b782706c133ae4bf7e776ae772e 289 SMART SM00646 118 273 4.0E-66 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM460_RS12165 c0103b782706c133ae4bf7e776ae772e 289 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 59 273 1.9E-51 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM460_RS12165 c0103b782706c133ae4bf7e776ae772e 289 Gene3D G3DSA:3.40.630.40 54 280 4.6E-57 T 29-03-2018 AM460_RS24250 9d2b85052cd5354fb8f45d2e5fe171ee 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 7.0E-67 T 29-03-2018 IPR006287 Protein DJ-1 AM460_RS24250 9d2b85052cd5354fb8f45d2e5fe171ee 196 Pfam PF01965 DJ-1/PfpI family 4 170 5.3E-48 T 29-03-2018 IPR002818 DJ-1/PfpI AM460_RS24250 9d2b85052cd5354fb8f45d2e5fe171ee 196 Gene3D G3DSA:3.40.50.880 1 190 1.1E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS24250 9d2b85052cd5354fb8f45d2e5fe171ee 196 SUPERFAMILY SSF52317 5 188 2.55E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.1E-27 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.1E-27 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.1E-27 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.1E-27 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.1E-27 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.1E-27 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 SUPERFAMILY SSF118215 29 443 2.48E-98 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 3.5E-105 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS16365 df6e0d39c5c781cb7c97fbc63282b482 463 Gene3D G3DSA:1.10.3860.10 19 450 1.3E-98 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM460_RS23460 05b0514fca91b17a16cd2d7894683586 377 SUPERFAMILY SSF160355 64 330 3.79E-83 T 29-03-2018 AM460_RS23460 05b0514fca91b17a16cd2d7894683586 377 Gene3D G3DSA:1.10.287.210 215 313 3.0E-27 T 29-03-2018 AM460_RS23460 05b0514fca91b17a16cd2d7894683586 377 Gene3D G3DSA:3.30.1890.10 52 214 1.0E-41 T 29-03-2018 AM460_RS23460 05b0514fca91b17a16cd2d7894683586 377 Pfam PF02706 Chain length determinant protein 25 122 1.1E-23 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM460_RS25785 e86b22c5f59d20da88da6e72f5221159 96 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 93 7.9E-27 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25785 e86b22c5f59d20da88da6e72f5221159 96 SUPERFAMILY SSF47345 3 94 2.49E-31 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25785 e86b22c5f59d20da88da6e72f5221159 96 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 10 93 6.0E-44 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25785 e86b22c5f59d20da88da6e72f5221159 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 5 23 1.1E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25785 e86b22c5f59d20da88da6e72f5221159 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 72 93 1.1E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25785 e86b22c5f59d20da88da6e72f5221159 96 Gene3D G3DSA:1.10.1200.20 2 94 1.3E-29 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS05405 569cf1feac98281f8232aeb1a75b1cc6 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 267 2.3E-16 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM460_RS05405 569cf1feac98281f8232aeb1a75b1cc6 274 SMART SM00047 127 256 9.6E-42 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM460_RS05405 569cf1feac98281f8232aeb1a75b1cc6 274 Gene3D G3DSA:1.10.530.10 69 272 3.4E-24 T 29-03-2018 AM460_RS14010 f785a04309b733519b9a09d3d4471a07 253 SUPERFAMILY SSF81606 10 147 1.11E-6 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM460_RS14010 f785a04309b733519b9a09d3d4471a07 253 Pfam PF13672 Protein phosphatase 2C 11 220 2.7E-45 T 29-03-2018 AM460_RS14010 f785a04309b733519b9a09d3d4471a07 253 Gene3D G3DSA:3.60.40.10 4 248 1.7E-4 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM460_RS15765 7d8379e5fea42581c55b512668789d47 218 Pfam PF00795 Carbon-nitrogen hydrolase 5 112 1.9E-15 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS15765 7d8379e5fea42581c55b512668789d47 218 Gene3D G3DSA:3.60.110.10 1 148 4.9E-13 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS15765 7d8379e5fea42581c55b512668789d47 218 SUPERFAMILY SSF56317 4 196 3.14E-18 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS24400 bb01225004d8ec7e4feda786edfaf27c 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 5.1E-128 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM460_RS24400 bb01225004d8ec7e4feda786edfaf27c 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 44.348 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 SUPERFAMILY SSF53187 397 482 3.01E-66 T 29-03-2018 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 SUPERFAMILY SSF53187 10 182 3.01E-66 T 29-03-2018 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.7E-103 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 Gene3D G3DSA:3.40.630.10 5 484 1.3E-52 T 29-03-2018 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 6.1E-21 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 Pfam PF07687 Peptidase dimerisation domain 209 293 7.1E-8 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 PIRSF PIRSF016599 1 485 1.0E-214 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS25095 1083fd6f239dbbb54c01004de18825c7 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 7.8E-186 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM460_RS23130 bcd97e3bc00223ec2a54bbc26c2099c7 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 82.647 T 29-03-2018 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 AM460_RS23130 bcd97e3bc00223ec2a54bbc26c2099c7 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AM460_RS23130 bcd97e3bc00223ec2a54bbc26c2099c7 311 SUPERFAMILY SSF53590 4 308 8.11E-108 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS23130 bcd97e3bc00223ec2a54bbc26c2099c7 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 1.9E-92 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS23130 bcd97e3bc00223ec2a54bbc26c2099c7 311 Gene3D G3DSA:3.90.245.10 2 311 2.3E-116 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM460_RS24560 a334794492d9150d4492f0062e19f558 277 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 274 4.4E-120 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AM460_RS24560 a334794492d9150d4492f0062e19f558 277 Gene3D G3DSA:3.40.50.1820 1 275 3.0E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS24560 a334794492d9150d4492f0062e19f558 277 Pfam PF00756 Putative esterase 21 268 1.5E-76 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM460_RS24560 a334794492d9150d4492f0062e19f558 277 SUPERFAMILY SSF53474 1 275 4.32E-83 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS12835 a5672449f447917ba669556cc4c0e10a 184 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 170 2.9E-52 T 29-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AM460_RS12835 a5672449f447917ba669556cc4c0e10a 184 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 29-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site AM460_RS12835 a5672449f447917ba669556cc4c0e10a 184 SUPERFAMILY SSF56300 2 164 1.19E-39 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS12835 a5672449f447917ba669556cc4c0e10a 184 Gene3D G3DSA:3.60.21.10 1 184 4.1E-32 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS12835 a5672449f447917ba669556cc4c0e10a 184 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 1.4E-25 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AM460_RS07455 e7b335ee1a6eca37cc7ce70d47aeab74 191 Gene3D G3DSA:2.60.450.10 25 149 6.8E-6 T 29-03-2018 AM460_RS07455 e7b335ee1a6eca37cc7ce70d47aeab74 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 8.6E-53 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM460_RS07455 e7b335ee1a6eca37cc7ce70d47aeab74 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.9E-54 T 29-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AM460_RS07455 e7b335ee1a6eca37cc7ce70d47aeab74 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.913 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM460_RS07455 e7b335ee1a6eca37cc7ce70d47aeab74 191 PIRSF PIRSF028513 1 186 3.4E-41 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM460_RS05570 095d9a8a6c9420c6061d50c277686b40 334 Gene3D G3DSA:3.40.50.300 9 334 7.6E-78 T 29-03-2018 AM460_RS05570 095d9a8a6c9420c6061d50c277686b40 334 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS05570 095d9a8a6c9420c6061d50c277686b40 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 8.6E-25 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS05570 095d9a8a6c9420c6061d50c277686b40 334 Pfam PF00005 ABC transporter 38 189 7.6E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS05570 095d9a8a6c9420c6061d50c277686b40 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 6.7E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS05570 095d9a8a6c9420c6061d50c277686b40 334 SUPERFAMILY SSF52540 13 261 5.09E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05570 095d9a8a6c9420c6061d50c277686b40 334 SMART SM00382 47 239 3.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS05170 8ad3270f83dfb37d8f527b65d1b4a933 344 SUPERFAMILY SSF53448 7 224 7.59E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS05170 8ad3270f83dfb37d8f527b65d1b4a933 344 Pfam PF00535 Glycosyl transferase family 2 9 137 6.0E-34 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS05170 8ad3270f83dfb37d8f527b65d1b4a933 344 Gene3D G3DSA:3.90.550.10 3 289 1.7E-48 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS19515 b999266a9806300a248bc50de4979ba7 403 Pfam PF00563 EAL domain 171 388 4.9E-49 T 29-03-2018 IPR001633 EAL domain AM460_RS19515 b999266a9806300a248bc50de4979ba7 403 SUPERFAMILY SSF141868 173 389 7.06E-43 T 29-03-2018 IPR001633 EAL domain AM460_RS19515 b999266a9806300a248bc50de4979ba7 403 Gene3D G3DSA:3.20.20.450 166 392 1.1E-45 T 29-03-2018 IPR001633 EAL domain AM460_RS19515 b999266a9806300a248bc50de4979ba7 403 SUPERFAMILY SSF54975 1 132 1.28E-35 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS19515 b999266a9806300a248bc50de4979ba7 403 Pfam PF04940 Sensors of blue-light using FAD 2 92 2.2E-24 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AM460_RS19515 b999266a9806300a248bc50de4979ba7 403 SMART SM01034 2 94 9.2E-38 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AM460_RS19515 b999266a9806300a248bc50de4979ba7 403 SMART SM00052 145 394 8.1E-58 T 29-03-2018 IPR001633 EAL domain AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 Gene3D G3DSA:2.40.50.140 979 1074 2.0E-16 T 29-03-2018 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 1.7E-8 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 Gene3D G3DSA:3.20.20.140 1 247 1.3E-38 T 29-03-2018 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 2.3E-25 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 SMART SM00481 7 74 1.5E-26 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 4.5E-179 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 Gene3D G3DSA:1.10.150.280 780 894 1.1E-8 T 29-03-2018 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 Pfam PF02811 PHP domain 8 171 7.8E-40 T 29-03-2018 IPR004013 PHP domain GO:0003824 AM460_RS25385 b4dc81144367e174c23b4e8fb294c9d2 1160 SUPERFAMILY SSF89550 6 263 8.44E-18 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM460_RS06045 88ff15d91aa45e3ce29c2f43434c6a78 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 3.7E-69 T 29-03-2018 IPR003744 Queuosine precursor transporter AM460_RS06045 88ff15d91aa45e3ce29c2f43434c6a78 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.0E-37 T 29-03-2018 IPR003744 Queuosine precursor transporter AM460_RS14125 f0e9f4396f312c06c37b578bebdb73d1 263 Gene3D G3DSA:3.90.550.10 1 263 9.2E-25 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS14125 f0e9f4396f312c06c37b578bebdb73d1 263 SUPERFAMILY SSF53448 2 252 5.09E-29 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS14125 f0e9f4396f312c06c37b578bebdb73d1 263 Pfam PF00535 Glycosyl transferase family 2 4 133 2.0E-6 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS06900 56aa23d4e137982cf428a6ee5372d2cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.7E-44 T 29-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06900 56aa23d4e137982cf428a6ee5372d2cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.9E-47 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06900 56aa23d4e137982cf428a6ee5372d2cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.115 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06900 56aa23d4e137982cf428a6ee5372d2cc 117 SUPERFAMILY SSF53137 3 115 5.45E-54 T 29-03-2018 AM460_RS06900 56aa23d4e137982cf428a6ee5372d2cc 117 Gene3D G3DSA:3.30.420.100 1 117 1.5E-39 T 29-03-2018 AM460_RS01620 e30d4794bd724a9a49164d3423b2dde9 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM460_RS01620 e30d4794bd724a9a49164d3423b2dde9 246 Gene3D G3DSA:3.40.190.80 149 245 3.7E-35 T 29-03-2018 AM460_RS01620 e30d4794bd724a9a49164d3423b2dde9 246 Pfam PF00459 Inositol monophosphatase family 5 233 4.6E-49 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM460_RS01620 e30d4794bd724a9a49164d3423b2dde9 246 Gene3D G3DSA:3.30.540.10 1 148 2.3E-40 T 29-03-2018 AM460_RS01620 e30d4794bd724a9a49164d3423b2dde9 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 5.1E-114 T 29-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AM460_RS01620 e30d4794bd724a9a49164d3423b2dde9 246 SUPERFAMILY SSF56655 1 243 2.36E-76 T 29-03-2018 AM460_RS01620 e30d4794bd724a9a49164d3423b2dde9 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 Gene3D G3DSA:1.10.3090.10 119 408 4.6E-60 T 29-03-2018 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.559 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 Pfam PF01743 Poly A polymerase head domain 3 122 1.3E-18 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 2.1E-15 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 Gene3D G3DSA:3.30.460.10 1 118 1.3E-30 T 29-03-2018 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.914 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 PIRSF PIRSF000813 1 408 1.1E-206 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 SUPERFAMILY SSF81891 120 402 1.15E-54 T 29-03-2018 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 SUPERFAMILY SSF81301 2 119 3.05E-32 T 29-03-2018 AM460_RS08200 d711dbf2460dceec05c7587dc26313e4 412 Pfam PF01966 HD domain 229 328 3.2E-12 T 29-03-2018 IPR006674 HD domain AM460_RS20730 c72ccfd5cce3382ae775701ab1be4741 148 PIRSF PIRSF028777 1 139 1.0E-54 T 29-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 AM460_RS20730 c72ccfd5cce3382ae775701ab1be4741 148 Pfam PF03733 Inner membrane component domain 77 127 5.4E-17 T 29-03-2018 IPR005185 Inner membrane component domain AM460_RS20730 c72ccfd5cce3382ae775701ab1be4741 148 Pfam PF03733 Inner membrane component domain 4 53 2.6E-9 T 29-03-2018 IPR005185 Inner membrane component domain AM460_RS11855 90b2f19ecb31318aed02d760ae3ca4f1 724 PRINTS PR01369 Intimin signature 188 203 3.5E-8 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS11855 90b2f19ecb31318aed02d760ae3ca4f1 724 PRINTS PR01369 Intimin signature 216 235 3.5E-8 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS11855 90b2f19ecb31318aed02d760ae3ca4f1 724 PRINTS PR01369 Intimin signature 284 303 3.5E-8 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM460_RS11855 90b2f19ecb31318aed02d760ae3ca4f1 724 Pfam PF11924 Inverse autotransporter, beta-domain 62 336 9.5E-106 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain AM460_RS19835 d11ef2152bc756a97c5753d021caccdb 60 Pfam PF07026 Protein of unknown function (DUF1317) 1 60 2.5E-39 T 29-03-2018 IPR009750 Protein of unknown function DUF1317 AM460_RS10250 05793d33afddf98c3a809ef19fa95319 140 Pfam PF05025 RbsD / FucU transport protein family 3 139 1.3E-34 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM460_RS10250 05793d33afddf98c3a809ef19fa95319 140 Gene3D G3DSA:3.40.1650.10 1 140 6.8E-47 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM460_RS10250 05793d33afddf98c3a809ef19fa95319 140 SUPERFAMILY SSF102546 1 139 1.96E-38 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM460_RS10250 05793d33afddf98c3a809ef19fa95319 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 48.785 T 29-03-2018 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 AM460_RS02965 66477c2cf894b04b293219c2611f9a60 533 PIRSF PIRSF001363 2 533 2.7E-252 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS02965 66477c2cf894b04b293219c2611f9a60 533 Pfam PF01274 Malate synthase 12 532 2.3E-217 T 29-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS02965 66477c2cf894b04b293219c2611f9a60 533 Gene3D G3DSA:1.20.1220.12 415 532 1.1E-47 T 29-03-2018 AM460_RS02965 66477c2cf894b04b293219c2611f9a60 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 7.9E-251 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS02965 66477c2cf894b04b293219c2611f9a60 533 SUPERFAMILY SSF51645 11 532 5.1E-191 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS02965 66477c2cf894b04b293219c2611f9a60 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 29-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM460_RS02965 66477c2cf894b04b293219c2611f9a60 533 Gene3D G3DSA:3.20.20.360 79 414 5.8E-109 T 29-03-2018 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 297 313 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 247 267 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 135 152 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 313 332 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 83 109 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 213 239 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 162 184 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 277 297 5.1E-72 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 421 563 2.3E-37 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 320 424 8.7E-23 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 376 388 2.2E-40 T 29-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 321 336 2.2E-40 T 29-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 559 572 2.2E-40 T 29-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 446 465 2.2E-40 T 29-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 342 360 2.2E-40 T 29-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 56 414 4.0E-184 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS02505 de38fd0288b13b11f5209750ac49d244 572 Pfam PF01578 Cytochrome C assembly protein 92 299 1.0E-49 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 SUPERFAMILY SSF54292 221 321 5.64E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 5.7E-6 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 5.7E-6 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 5.7E-6 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 Gene3D G3DSA:2.40.30.10 8 104 4.7E-18 T 29-03-2018 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 210 4.8E-7 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 Gene3D G3DSA:3.10.20.30 220 322 4.8E-22 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 315 4.8E-14 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 SUPERFAMILY SSF52343 95 220 1.17E-24 T 29-03-2018 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 Gene3D G3DSA:3.40.50.80 105 219 2.2E-18 T 29-03-2018 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 SUPERFAMILY SSF63380 9 105 3.11E-21 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS21940 bbcff16c77169dc0332f518e6bd9728a 322 Pfam PF00970 Oxidoreductase FAD-binding domain 35 104 5.3E-7 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM460_RS04925 eeb7380209115e3bf07b2f160efd31ce 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 2.8E-156 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM460_RS04925 eeb7380209115e3bf07b2f160efd31ce 460 Gene3D G3DSA:1.20.1250.20 15 212 6.5E-14 T 29-03-2018 AM460_RS04925 eeb7380209115e3bf07b2f160efd31ce 460 Gene3D G3DSA:1.20.1250.20 213 452 1.8E-11 T 29-03-2018 AM460_RS04925 eeb7380209115e3bf07b2f160efd31ce 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 29-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AM460_RS04925 eeb7380209115e3bf07b2f160efd31ce 460 SUPERFAMILY SSF103473 13 426 4.05E-30 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04925 eeb7380209115e3bf07b2f160efd31ce 460 Pfam PF13347 MFS/sugar transport protein 13 431 2.0E-102 T 29-03-2018 AM460_RS02925 a025b55838ce293ae4b5d07476c609cd 229 Pfam PF03575 Peptidase family S51 3 205 4.3E-62 T 29-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AM460_RS02925 a025b55838ce293ae4b5d07476c609cd 229 SUPERFAMILY SSF52317 1 220 1.19E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS02925 a025b55838ce293ae4b5d07476c609cd 229 Gene3D G3DSA:3.40.50.880 1 229 4.0E-48 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS02925 a025b55838ce293ae4b5d07476c609cd 229 Hamap MF_00510 Peptidase E [pepE]. 1 215 48.763 T 29-03-2018 IPR023172 Peptidase S51, dipeptidase E GO:0016805 AM460_RS09160 3c00f1e262b4484ec38a8ae7ce65e1db 315 Pfam PF13523 Acetyltransferase (GNAT) domain 149 294 3.5E-51 T 29-03-2018 AM460_RS09160 3c00f1e262b4484ec38a8ae7ce65e1db 315 Gene3D G3DSA:3.40.630.30 106 311 2.0E-22 T 29-03-2018 AM460_RS09160 3c00f1e262b4484ec38a8ae7ce65e1db 315 SUPERFAMILY SSF55729 116 306 1.7E-57 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS09160 3c00f1e262b4484ec38a8ae7ce65e1db 315 SMART SM01006 146 193 2.5E-17 T 29-03-2018 IPR019432 Siderophore biosynthesis protein, conserved domain AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 Gene3D G3DSA:2.30.30.60 946 996 3.8E-13 T 29-03-2018 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 959 993 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 Gene3D G3DSA:3.40.50.300 25 798 7.7E-4 T 29-03-2018 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 Gene3D G3DSA:3.30.70.100 997 1091 2.9E-20 T 29-03-2018 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 SUPERFAMILY SSF50182 930 995 6.87E-17 T 29-03-2018 IPR010920 LSM domain AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 Pfam PF12795 Mechanosensitive ion channel porin domain 50 289 1.9E-64 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 SUPERFAMILY SSF82861 845 928 1.22E-8 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 Pfam PF00924 Mechanosensitive ion channel 887 1086 2.6E-61 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 SUPERFAMILY SSF81665 683 770 7.45E-6 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 SUPERFAMILY SSF81665 844 900 7.45E-6 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 SUPERFAMILY SSF81665 504 594 7.45E-6 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 509 826 6.0E-96 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM460_RS24035 52b80709f8257af24c9a409ad8d09569 1120 SUPERFAMILY SSF82689 998 1097 4.71E-26 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM460_RS04465 1d51805b823a2bf863435326e50de86b 483 Pfam PF05762 VWA domain containing CoxE-like protein 307 458 1.7E-10 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like AM460_RS04465 1d51805b823a2bf863435326e50de86b 483 Gene3D G3DSA:3.40.50.410 299 464 1.9E-19 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS04465 1d51805b823a2bf863435326e50de86b 483 SUPERFAMILY SSF53300 318 459 4.79E-19 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS04465 1d51805b823a2bf863435326e50de86b 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 60.42 T 29-03-2018 IPR023481 Uncharacterised protein family ViaA AM460_RS04465 1d51805b823a2bf863435326e50de86b 483 SMART SM00327 319 483 2.1E-13 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS17080 6916987669a45e098150ebab9efb4ecc 344 Pfam PF01594 AI-2E family transporter 14 328 9.8E-77 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AM460_RS23740 e6d73c1c7d04a08c6365d7b215028a2d 419 Gene3D G3DSA:1.10.10.660 40 104 3.2E-34 T 29-03-2018 IPR024033 Uncharacterised domain, YlbE AM460_RS23740 e6d73c1c7d04a08c6365d7b215028a2d 419 Gene3D G3DSA:3.90.1700.10 250 413 6.8E-73 T 29-03-2018 AM460_RS23740 e6d73c1c7d04a08c6365d7b215028a2d 419 Gene3D G3DSA:3.90.1710.10 105 247 2.2E-61 T 29-03-2018 AM460_RS23740 e6d73c1c7d04a08c6365d7b215028a2d 419 Pfam PF06545 Protein of unknown function (DUF1116) 87 302 1.1E-98 T 29-03-2018 IPR009499 Protein of unknown function DUF1116 AM460_RS15495 898363cdbf5567c0bc3148fd9f4487fb 266 Gene3D G3DSA:3.40.50.1000 14 260 1.4E-22 T 29-03-2018 IPR023214 HAD-like domain AM460_RS15495 898363cdbf5567c0bc3148fd9f4487fb 266 SUPERFAMILY SSF56784 17 243 8.48E-40 T 29-03-2018 IPR023214 HAD-like domain AM460_RS15495 898363cdbf5567c0bc3148fd9f4487fb 266 Pfam PF02358 Trehalose-phosphatase 18 229 4.6E-56 T 29-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AM460_RS15495 898363cdbf5567c0bc3148fd9f4487fb 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 213 1.7E-21 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS15495 898363cdbf5567c0bc3148fd9f4487fb 266 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 12 244 1.5E-91 T 29-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AM460_RS16590 ff2958a400f6f0c14c4b1b3850690cab 118 Gene3D G3DSA:1.10.3100.10 1 118 1.6E-15 T 29-03-2018 IPR027910 YdiL-like domain AM460_RS16590 ff2958a400f6f0c14c4b1b3850690cab 118 Pfam PF08965 Domain of unknown function (DUF1870) 1 118 7.8E-57 T 29-03-2018 IPR015060 Protein of unknown function DUF1870 AM460_RS16590 ff2958a400f6f0c14c4b1b3850690cab 118 SUPERFAMILY SSF47413 1 118 7.31E-49 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 Pfam PF00294 pfkB family carbohydrate kinase 19 306 1.4E-53 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 PRINTS PR00990 Ribokinase signature 21 42 2.4E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 PRINTS PR00990 Ribokinase signature 48 67 2.4E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 PRINTS PR00990 Ribokinase signature 234 245 2.4E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 PRINTS PR00990 Ribokinase signature 191 206 2.4E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 Gene3D G3DSA:3.40.1190.20 15 320 1.6E-47 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS13885 6fb210d256bc23b9b59215d6f3ab2d0d 321 SUPERFAMILY SSF53613 18 312 4.37E-53 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS15595 2defb4a614a4db11e4f0fd0d2564db90 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 39.171 T 29-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM460_RS15595 2defb4a614a4db11e4f0fd0d2564db90 248 Pfam PF03932 CutC family 3 200 2.2E-85 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM460_RS15595 2defb4a614a4db11e4f0fd0d2564db90 248 SUPERFAMILY SSF110395 3 245 1.44E-77 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM460_RS15595 2defb4a614a4db11e4f0fd0d2564db90 248 Gene3D G3DSA:3.20.20.380 1 248 1.7E-92 T 29-03-2018 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 9.9E-169 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 PIRSF PIRSF000164 11 336 2.7E-97 T 29-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.162 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 4.8E-93 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 Gene3D G3DSA:3.20.20.70 1 336 5.8E-77 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS20815 fc4bfcd5717b5bcdf20671a95eeae1db 336 SUPERFAMILY SSF51395 1 334 3.44E-104 T 29-03-2018 AM460_RS12365 7ef397182a8bc6505c911d9ccddd495e 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 1.4E-146 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AM460_RS12365 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF07670 Nucleoside recognition 92 189 5.3E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM460_RS12365 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 5.0E-21 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM460_RS12365 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 1.1E-58 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM460_RS18760 a1449069c225bbca0def49d3ec47cec4 376 Gene3D G3DSA:1.10.150.130 81 193 9.2E-9 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS18760 a1449069c225bbca0def49d3ec47cec4 376 Gene3D G3DSA:1.10.443.10 194 376 2.1E-18 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS18760 a1449069c225bbca0def49d3ec47cec4 376 Gene3D G3DSA:3.30.160.60 1 62 4.7E-17 T 29-03-2018 AM460_RS18760 a1449069c225bbca0def49d3ec47cec4 376 Pfam PF00589 Phage integrase family 193 366 8.4E-15 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS18760 a1449069c225bbca0def49d3ec47cec4 376 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 2 72 7.1E-24 T 29-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 AM460_RS18760 a1449069c225bbca0def49d3ec47cec4 376 SUPERFAMILY SSF56349 97 374 3.53E-46 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS26475 52b4439e0f263538655b6c1f2e105677 150 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 27 143 3.0E-35 T 29-03-2018 IPR022753 Type IV pilus biogenesis PilP AM460_RS18780 8c585b7649d7ec529b4626aae11e8bee 179 Pfam PF04279 Intracellular septation protein A 1 175 1.8E-72 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM460_RS18780 8c585b7649d7ec529b4626aae11e8bee 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 4.3E-75 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM460_RS18780 8c585b7649d7ec529b4626aae11e8bee 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.524 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM460_RS16005 6b2a44725c222898af8834d81fe2c51f 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 5.5E-32 T 29-03-2018 IPR015051 Protein YoaG AM460_RS16005 6b2a44725c222898af8834d81fe2c51f 60 SUPERFAMILY SSF103063 1 60 3.01E-32 T 29-03-2018 IPR015051 Protein YoaG AM460_RS16005 6b2a44725c222898af8834d81fe2c51f 60 Gene3D G3DSA:3.30.160.220 3 55 2.8E-28 T 29-03-2018 IPR015051 Protein YoaG AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 248 1.2E-64 T 29-03-2018 AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 SUPERFAMILY SSF51735 10 248 1.63E-81 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 Gene3D G3DSA:3.40.50.10090 4 52 3.1E-10 T 29-03-2018 AM460_RS16985 dbffdd5c7ade8784ad7ca83bdfd2271b 255 Gene3D G3DSA:3.40.50.720 53 252 4.2E-60 T 29-03-2018 AM460_RS16830 ed0b7f74ce1434c6923864f1ef2399fe 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 6.0E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16830 ed0b7f74ce1434c6923864f1ef2399fe 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 6.0E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16830 ed0b7f74ce1434c6923864f1ef2399fe 298 Pfam PF00248 Aldo/keto reductase family 18 291 2.4E-57 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS16830 ed0b7f74ce1434c6923864f1ef2399fe 298 SUPERFAMILY SSF51430 4 295 4.06E-71 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS16830 ed0b7f74ce1434c6923864f1ef2399fe 298 Gene3D G3DSA:3.20.20.100 1 298 1.4E-60 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS22195 fc2a1e87154185d8972a98189448a118 299 SUPERFAMILY SSF102114 105 267 1.65E-14 T 29-03-2018 AM460_RS22195 fc2a1e87154185d8972a98189448a118 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM460_RS22195 fc2a1e87154185d8972a98189448a118 299 Pfam PF13353 4Fe-4S single cluster domain 12 154 5.9E-10 T 29-03-2018 AM460_RS22195 fc2a1e87154185d8972a98189448a118 299 Pfam PF04055 Radical SAM superfamily 19 229 1.4E-32 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS22195 fc2a1e87154185d8972a98189448a118 299 PIRSF PIRSF000371 1 298 5.4E-92 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM460_RS22195 fc2a1e87154185d8972a98189448a118 299 Gene3D G3DSA:3.80.30.10 121 299 1.5E-29 T 29-03-2018 AM460_RS22195 fc2a1e87154185d8972a98189448a118 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 292 6.9E-111 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM460_RS27615 329d72a45f26ab08de857b6bb00ae5bf 453 Pfam PF12083 Domain of unknown function (DUF3560) 89 208 1.5E-37 T 29-03-2018 IPR021944 Protein of unknown function DUF3560 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 SUPERFAMILY SSF101790 271 361 3.11E-26 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 SUPERFAMILY SSF103025 3 277 1.04E-89 T 29-03-2018 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:3.30.1360.120 136 231 2.4E-23 T 29-03-2018 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 1.1E-18 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:2.40.30.110 277 364 4.0E-19 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:4.10.1250.10 232 276 5.9E-16 T 29-03-2018 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.666 T 29-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:3.30.1360.120 2 135 6.2E-33 T 29-03-2018 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 4.1E-82 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 PIRSF PIRSF006487 1 363 5.4E-79 T 29-03-2018 AM460_RS09660 f77238b6e588e105602f698c7189ce8b 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 9.2E-170 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM460_RS17505 671156edcd90ee10164e3513a834d157 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 3.9E-29 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS17505 671156edcd90ee10164e3513a834d157 336 Gene3D G3DSA:3.40.50.720 165 282 1.0E-23 T 29-03-2018 AM460_RS17505 671156edcd90ee10164e3513a834d157 336 SUPERFAMILY SSF50129 1 169 4.26E-47 T 29-03-2018 IPR011032 GroES-like AM460_RS17505 671156edcd90ee10164e3513a834d157 336 Gene3D G3DSA:3.90.180.10 1 164 2.6E-51 T 29-03-2018 AM460_RS17505 671156edcd90ee10164e3513a834d157 336 SUPERFAMILY SSF51735 135 302 2.58E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17505 671156edcd90ee10164e3513a834d157 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS17505 671156edcd90ee10164e3513a834d157 336 SMART SM00829 8 332 1.5E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS17505 671156edcd90ee10164e3513a834d157 336 Pfam PF00107 Zinc-binding dehydrogenase 172 298 6.4E-28 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS10945 5908b6f720285b949c956029c9906c30 174 SMART SM00450 6 102 3.6E-15 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS10945 5908b6f720285b949c956029c9906c30 174 Gene3D G3DSA:3.40.250.10 2 121 1.4E-18 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS10945 5908b6f720285b949c956029c9906c30 174 Pfam PF00581 Rhodanese-like domain 7 99 4.1E-10 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS10945 5908b6f720285b949c956029c9906c30 174 SUPERFAMILY SSF52821 2 153 1.83E-24 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS10945 5908b6f720285b949c956029c9906c30 174 Pfam PF11127 Protein of unknown function (DUF2892) 115 171 2.2E-10 T 29-03-2018 IPR021309 Protein of unknown function DUF2892 AM460_RS19575 ea40546ff5fa239ccd6a8c629b7c4bf7 285 SUPERFAMILY SSF81345 6 261 8.76E-35 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS19575 ea40546ff5fa239ccd6a8c629b7c4bf7 285 Pfam PF00950 ABC 3 transport family 10 265 2.9E-76 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM460_RS19575 ea40546ff5fa239ccd6a8c629b7c4bf7 285 Gene3D G3DSA:1.10.3470.10 5 277 2.3E-24 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS18075 1fb0c878ff38e3d35965a2abbf36ae6f 280 Gene3D G3DSA:1.10.3720.10 1 267 6.4E-47 T 29-03-2018 AM460_RS18075 1fb0c878ff38e3d35965a2abbf36ae6f 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 267 2.9E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18075 1fb0c878ff38e3d35965a2abbf36ae6f 280 SUPERFAMILY SSF161098 5 280 5.79E-71 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS10040 cca708c817abd301c9eb12eecd029946 315 Gene3D G3DSA:3.40.50.720 113 286 1.2E-45 T 29-03-2018 AM460_RS10040 cca708c817abd301c9eb12eecd029946 315 Gene3D G3DSA:3.40.50.720 1 112 6.1E-20 T 29-03-2018 AM460_RS10040 cca708c817abd301c9eb12eecd029946 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 314 1.9E-21 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM460_RS10040 cca708c817abd301c9eb12eecd029946 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 284 4.3E-46 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM460_RS10040 cca708c817abd301c9eb12eecd029946 315 SUPERFAMILY SSF52283 19 137 4.91E-22 T 29-03-2018 AM460_RS10040 cca708c817abd301c9eb12eecd029946 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM460_RS10040 cca708c817abd301c9eb12eecd029946 315 SUPERFAMILY SSF51735 103 285 8.78E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07115 105503ec0a857ae7f390413c9c7c874c 59 ProDom PD052549 YHDU TRANSMEMBRANE MEMBRANE PERIPLASMIC 1 53 6.0E-14 T 29-03-2018 IPR022540 Protein of unknown function DUF2556 AM460_RS07115 105503ec0a857ae7f390413c9c7c874c 59 Pfam PF10831 Protein of unknown function (DUF2556) 1 53 1.4E-35 T 29-03-2018 IPR022540 Protein of unknown function DUF2556 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 Gene3D G3DSA:2.40.50.140 1 124 1.5E-63 T 29-03-2018 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 PIRSF PIRSF002133 1 124 9.5E-54 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 SUPERFAMILY SSF50249 3 123 1.63E-51 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.634 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.6E-70 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06705 29495e0d2573e3eb61572cc610d4e48b 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 5.1E-43 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 Pfam PF00581 Rhodanese-like domain 179 263 9.7E-12 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 Pfam PF00581 Rhodanese-like domain 297 418 6.9E-12 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 Pfam PF00581 Rhodanese-like domain 34 128 2.2E-4 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 Gene3D G3DSA:3.40.250.10 22 133 9.2E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 SUPERFAMILY SSF52821 288 428 1.44E-31 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 ProSitePatterns PS00380 Rhodanese signature 1. 181 192 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 SUPERFAMILY SSF52821 33 128 9.69E-9 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 ProSitePatterns PS00683 Rhodanese C-terminal signature. 406 416 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 SUPERFAMILY SSF52821 141 275 3.27E-27 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 SMART SM00450 26 139 6.5E-5 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 SMART SM00450 146 267 4.8E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 SMART SM00450 294 422 1.8E-15 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 Gene3D G3DSA:3.40.250.10 284 435 1.3E-26 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS16220 47ece4ebf32db9e370c7c8d049f3003a 435 Gene3D G3DSA:3.40.250.10 139 283 4.8E-28 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS03360 383e03bf261f561890bf9f669c300536 296 SUPERFAMILY SSF51730 22 294 1.55E-96 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM460_RS03360 383e03bf261f561890bf9f669c300536 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 9.7E-106 T 29-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AM460_RS03360 383e03bf261f561890bf9f669c300536 296 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 7.2E-108 T 29-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM460_RS03360 383e03bf261f561890bf9f669c300536 296 Gene3D G3DSA:3.20.20.220 1 296 1.7E-100 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM460_RS00500 503796e46042eac518052211143c7a7e 287 Pfam PF13353 4Fe-4S single cluster domain 17 169 2.0E-7 T 29-03-2018 AM460_RS00500 503796e46042eac518052211143c7a7e 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS00500 503796e46042eac518052211143c7a7e 287 SUPERFAMILY SSF102114 79 263 7.85E-13 T 29-03-2018 AM460_RS00500 503796e46042eac518052211143c7a7e 287 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 282 2.5E-118 T 29-03-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW AM460_RS00500 503796e46042eac518052211143c7a7e 287 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM460_RS00500 503796e46042eac518052211143c7a7e 287 Pfam PF04055 Radical SAM superfamily 27 232 3.5E-24 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS00500 503796e46042eac518052211143c7a7e 287 Gene3D G3DSA:3.30.70.20 16 55 0.0019 T 29-03-2018 AM460_RS00500 503796e46042eac518052211143c7a7e 287 Gene3D G3DSA:3.80.30.10 114 281 1.2E-24 T 29-03-2018 AM460_RS00500 503796e46042eac518052211143c7a7e 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS00500 503796e46042eac518052211143c7a7e 287 SUPERFAMILY SSF54862 43 123 6.52E-15 T 29-03-2018 AM460_RS00500 503796e46042eac518052211143c7a7e 287 Gene3D G3DSA:3.30.70.20 80 113 0.044 T 29-03-2018 AM460_RS00500 503796e46042eac518052211143c7a7e 287 PIRSF PIRSF000371 1 287 1.2E-95 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM460_RS00500 503796e46042eac518052211143c7a7e 287 Gene3D G3DSA:3.30.70.20 56 79 2.5E-9 T 29-03-2018 AM460_RS07495 cf5447b7d727e4f0b5b24588733c5d75 97 Gene3D G3DSA:3.30.750.24 14 96 5.4E-7 T 29-03-2018 IPR002645 STAS domain AM460_RS07495 cf5447b7d727e4f0b5b24588733c5d75 97 Pfam PF13466 STAS domain 14 90 6.1E-17 T 29-03-2018 IPR002645 STAS domain AM460_RS07495 cf5447b7d727e4f0b5b24588733c5d75 97 SUPERFAMILY SSF52091 6 91 5.49E-14 T 29-03-2018 IPR002645 STAS domain AM460_RS04270 e9082e11aab08a8bf59da09531267d01 348 Pfam PF02706 Chain length determinant protein 15 85 1.0E-14 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM460_RS04270 e9082e11aab08a8bf59da09531267d01 348 Gene3D G3DSA:3.30.1890.10 42 202 6.8E-56 T 29-03-2018 AM460_RS04270 e9082e11aab08a8bf59da09531267d01 348 Gene3D G3DSA:1.10.287.210 203 294 9.8E-22 T 29-03-2018 AM460_RS04270 e9082e11aab08a8bf59da09531267d01 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 57.659 T 29-03-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 AM460_RS04270 e9082e11aab08a8bf59da09531267d01 348 SUPERFAMILY SSF160355 54 318 1.06E-87 T 29-03-2018 AM460_RS04980 3ff4cae3eab8617935adc1d51c352d85 463 Pfam PF00860 Permease family 34 426 1.9E-112 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS04980 3ff4cae3eab8617935adc1d51c352d85 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 7.3E-143 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS04980 3ff4cae3eab8617935adc1d51c352d85 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS04460 7459c4a5d879d50a6652bc6419387ba8 498 SMART SM00382 38 187 1.6E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS04460 7459c4a5d879d50a6652bc6419387ba8 498 Gene3D G3DSA:3.40.50.300 6 223 4.9E-18 T 29-03-2018 AM460_RS04460 7459c4a5d879d50a6652bc6419387ba8 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 2.2E-24 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM460_RS04460 7459c4a5d879d50a6652bc6419387ba8 498 Hamap MF_01625 ATPase RavA [ravA]. 1 498 58.993 T 29-03-2018 IPR023671 ATPase RavA GO:0005737|GO:0016887 AM460_RS04460 7459c4a5d879d50a6652bc6419387ba8 498 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 2.5E-22 T 29-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 AM460_RS04460 7459c4a5d879d50a6652bc6419387ba8 498 SUPERFAMILY SSF52540 12 264 3.18E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00945 6385f119619bb09a193bdd495b880cb1 428 Pfam PF10117 McrBC 5-methylcytosine restriction system component 59 383 1.8E-94 T 29-03-2018 IPR019292 5-methylcytosine restriction system component AM460_RS00765 e1be2efdebafdb2189690c233440a7a5 227 Pfam PF07670 Nucleoside recognition 85 178 4.3E-6 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM460_RS23550 62eb3de9aef5a0f213e6e86136e99a2a 50 Pfam PF01848 Hok/gef family 5 46 8.9E-17 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS23550 62eb3de9aef5a0f213e6e86136e99a2a 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS23550 62eb3de9aef5a0f213e6e86136e99a2a 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 6.7E-11 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS23550 62eb3de9aef5a0f213e6e86136e99a2a 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 6.7E-11 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS23550 62eb3de9aef5a0f213e6e86136e99a2a 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 5.0E-21 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PIRSF PIRSF019574 1 348 5.5E-135 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 Gene3D G3DSA:3.40.190.10 146 300 4.2E-41 T 29-03-2018 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 Pfam PF13416 Bacterial extracellular solute-binding protein 42 313 4.7E-39 T 29-03-2018 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 Gene3D G3DSA:3.40.190.10 24 145 2.9E-17 T 29-03-2018 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 5.3E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM460_RS19945 deb60b2fe7540a73ca34fe874e1d1a20 348 SUPERFAMILY SSF53850 27 345 4.98E-98 T 29-03-2018 AM460_RS02900 7df0036d5cfce21f69cb9c2c46e371ad 135 Gene3D G3DSA:3.40.50.510 1 134 4.6E-27 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS02900 7df0036d5cfce21f69cb9c2c46e371ad 135 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 1.7E-43 T 29-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 AM460_RS02900 7df0036d5cfce21f69cb9c2c46e371ad 135 Pfam PF03610 PTS system fructose IIA component 7 113 2.6E-17 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS02900 7df0036d5cfce21f69cb9c2c46e371ad 135 SUPERFAMILY SSF53062 1 125 2.75E-30 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS07665 acd4980b2719804b600214ab7468b687 292 Pfam PF01136 Peptidase family U32 92 198 3.5E-11 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM460_RS11285 521ad86301e1f08cd3c4c4a32548a8e6 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 4.2E-32 T 29-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AM460_RS11285 521ad86301e1f08cd3c4c4a32548a8e6 158 SUPERFAMILY SSF55961 14 157 1.04E-34 T 29-03-2018 AM460_RS11285 521ad86301e1f08cd3c4c4a32548a8e6 158 Gene3D G3DSA:3.30.530.20 14 157 8.5E-33 T 29-03-2018 IPR023393 START-like domain AM460_RS02180 bf740c06f6535220444f315b83401497 90 SUPERFAMILY SSF55729 2 88 1.76E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS02180 bf740c06f6535220444f315b83401497 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 6.7E-22 T 29-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AM460_RS02180 bf740c06f6535220444f315b83401497 90 Gene3D G3DSA:3.40.630.30 1 90 3.8E-15 T 29-03-2018 AM460_RS17330 ef62a653a56f596ff64ca241f44d6c4d 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 306 6.3E-39 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17330 ef62a653a56f596ff64ca241f44d6c4d 315 Gene3D G3DSA:3.30.70.270 139 313 4.8E-44 T 29-03-2018 AM460_RS17330 ef62a653a56f596ff64ca241f44d6c4d 315 SMART SM00267 135 308 7.3E-58 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17330 ef62a653a56f596ff64ca241f44d6c4d 315 SUPERFAMILY SSF55073 151 306 2.75E-38 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS17330 ef62a653a56f596ff64ca241f44d6c4d 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 304 5.9E-43 T 29-03-2018 IPR000160 GGDEF domain AM460_RS01170 03fd2fd6554d81b0570793a9cb8e8277 318 SUPERFAMILY SSF81345 3 316 1.44E-79 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS01170 03fd2fd6554d81b0570793a9cb8e8277 318 Gene3D G3DSA:1.10.3470.10 1 318 2.1E-68 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS01170 03fd2fd6554d81b0570793a9cb8e8277 318 Pfam PF01032 FecCD transport family 14 316 1.9E-93 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS16390 3503f46ecbe2c4a9c6d3bca31aad9579 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 96 1.0E-49 T 29-03-2018 IPR020499 Uncharacterised protein family YdiZ AM460_RS16390 3503f46ecbe2c4a9c6d3bca31aad9579 96 Pfam PF11080 Endoribonuclease GhoS 1 93 4.2E-41 T 29-03-2018 IPR022597 Endoribonuclease GhoS GO:0004521 AM460_RS14480 3b12393819fcaaf34529fb734a58cb57 46 SUPERFAMILY SSF68989 2 31 4.45E-7 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS14480 3b12393819fcaaf34529fb734a58cb57 46 Pfam PF05321 Haemolysin expression modulating protein 2 31 1.5E-6 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS14480 3b12393819fcaaf34529fb734a58cb57 46 Gene3D G3DSA:1.20.1280.40 1 36 3.9E-7 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 324 349 - T 29-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 Pfam PF00703 Glycosyl hydrolases family 2 184 272 8.9E-7 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 SUPERFAMILY SSF51445 274 590 5.8E-85 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 Gene3D G3DSA:2.60.40.10 181 273 7.1E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 Gene3D G3DSA:3.20.20.80 274 592 1.4E-61 T 29-03-2018 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 Gene3D G3DSA:2.60.120.260 1 180 3.1E-42 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 SUPERFAMILY SSF49303 182 273 3.74E-20 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 91 106 1.3E-17 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 314 332 1.3E-17 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 399 414 1.3E-17 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 283 297 1.3E-17 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 498 513 1.3E-17 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 274 593 2.7E-111 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 SUPERFAMILY SSF49785 1 180 4.39E-58 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 399 413 - T 29-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM460_RS16995 c38c32cbc6a66abd724f5d3efe20f545 603 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 12 180 1.3E-65 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 Gene3D G3DSA:3.20.20.100 1 263 8.0E-83 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.5E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.5E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 1.5E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 1.5E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 1.5E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 PIRSF PIRSF000097 1 265 1.5E-66 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 SUPERFAMILY SSF51430 2 257 1.57E-80 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS25265 3ebcbaaf362f7071d66dd6616eb06090 267 Pfam PF00248 Aldo/keto reductase family 9 250 1.5E-48 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS18880 68e4c980d517808ca80ec4f367260864 301 Pfam PF01734 Patatin-like phospholipase 8 165 7.4E-24 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM460_RS18880 68e4c980d517808ca80ec4f367260864 301 Gene3D G3DSA:3.40.1090.10 2 291 1.6E-39 T 29-03-2018 AM460_RS18880 68e4c980d517808ca80ec4f367260864 301 SUPERFAMILY SSF52151 1 295 2.79E-57 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS18880 68e4c980d517808ca80ec4f367260864 301 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 29-03-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 Gene3D G3DSA:1.50.10.10 22 360 8.0E-99 T 29-03-2018 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 114 132 1.4E-21 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 331 345 1.4E-21 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 215 226 1.4E-21 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 240 249 1.4E-21 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 1.4E-21 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 179 196 1.4E-21 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 Pfam PF01270 Glycosyl hydrolases family 8 1 346 9.0E-149 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 114 132 - T 29-03-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM460_RS05650 be16adf29332d9301b0b4357bf99b51e 368 SUPERFAMILY SSF48208 9 350 3.06E-104 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM460_RS12710 fe55c426377d9d25b7954aaf7fc8c402 92 Pfam PF08891 YfcL protein 4 87 8.0E-35 T 29-03-2018 IPR014987 Uncharacterised protein family YfcL AM460_RS12710 fe55c426377d9d25b7954aaf7fc8c402 92 Gene3D G3DSA:1.10.357.10 2 92 4.9E-4 T 29-03-2018 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 7.3E-49 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 5.7E-49 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 Gene3D G3DSA:1.10.1200.70 332 418 1.1E-22 T 29-03-2018 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 SUPERFAMILY SSF69742 1 158 3.27E-47 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 4.0E-170 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 PIRSF PIRSF000445 1 418 1.1E-154 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.807 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 Gene3D G3DSA:3.40.50.720 161 314 6.5E-23 T 29-03-2018 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 SUPERFAMILY SSF51735 162 315 3.84E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 29-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 1.1E-23 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS19030 4e58cd9e46017289a947dcded203d626 418 SUPERFAMILY SSF69075 317 417 5.89E-27 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM460_RS06750 5c52587a669631c641865d22291d3a86 153 Pfam PF04612 Type II secretion system (T2SS), protein M 2 150 5.2E-31 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AM460_RS06750 5c52587a669631c641865d22291d3a86 153 SUPERFAMILY SSF103054 76 138 4.18E-5 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AM460_RS06750 5c52587a669631c641865d22291d3a86 153 Gene3D G3DSA:3.30.1360.100 77 150 0.0012 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 SMART SM00895 96 227 1.8E-20 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.6E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.6E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 1.3E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 Pfam PF07729 FCD domain 96 226 5.3E-22 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 Gene3D G3DSA:1.20.120.530 82 242 5.7E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 SMART SM00345 12 71 5.2E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 Gene3D G3DSA:1.10.10.10 1 73 1.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 SUPERFAMILY SSF48008 93 233 8.63E-24 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS08690 f42ef79cf92ca8459b1f4b5c87775a82 254 SUPERFAMILY SSF46785 4 75 6.82E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07460 471f78badf345b30ef2b3edd9adabdfa 188 SUPERFAMILY SSF56784 22 181 1.97E-41 T 29-03-2018 IPR023214 HAD-like domain AM460_RS07460 471f78badf345b30ef2b3edd9adabdfa 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 9.3E-78 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS07460 471f78badf345b30ef2b3edd9adabdfa 188 Gene3D G3DSA:3.40.50.1000 3 188 2.6E-26 T 29-03-2018 IPR023214 HAD-like domain AM460_RS07460 471f78badf345b30ef2b3edd9adabdfa 188 PIRSF PIRSF006118 13 188 6.8E-75 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS07460 471f78badf345b30ef2b3edd9adabdfa 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 158 4.1E-11 T 29-03-2018 IPR023214 HAD-like domain AM460_RS07365 0c90b59e7db2e049c66c0c4e89a20af8 291 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 49.196 T 29-03-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 AM460_RS07365 0c90b59e7db2e049c66c0c4e89a20af8 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS07365 0c90b59e7db2e049c66c0c4e89a20af8 291 Gene3D G3DSA:3.30.420.40 2 118 1.8E-23 T 29-03-2018 AM460_RS07365 0c90b59e7db2e049c66c0c4e89a20af8 291 Pfam PF00480 ROK family 4 288 1.3E-92 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS07365 0c90b59e7db2e049c66c0c4e89a20af8 291 Gene3D G3DSA:3.30.420.40 119 291 5.8E-46 T 29-03-2018 AM460_RS07365 0c90b59e7db2e049c66c0c4e89a20af8 291 SUPERFAMILY SSF53067 1 287 4.58E-55 T 29-03-2018 AM460_RS03060 b620eef83f26a505c8ad08cdec30c90b 354 Gene3D G3DSA:3.20.20.210 1 354 4.7E-111 T 29-03-2018 AM460_RS03060 b620eef83f26a505c8ad08cdec30c90b 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 3.0E-137 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM460_RS03060 b620eef83f26a505c8ad08cdec30c90b 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.739 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM460_RS03060 b620eef83f26a505c8ad08cdec30c90b 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM460_RS03060 b620eef83f26a505c8ad08cdec30c90b 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM460_RS03060 b620eef83f26a505c8ad08cdec30c90b 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 1.0E-142 T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM460_RS03060 b620eef83f26a505c8ad08cdec30c90b 354 SUPERFAMILY SSF51726 1 352 8.37E-123 T 29-03-2018 AM460_RS19460 82813558a155e8b0843b8fd810f35932 195 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 68 195 6.2E-23 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS19460 82813558a155e8b0843b8fd810f35932 195 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2 68 8.3E-7 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM460_RS19460 82813558a155e8b0843b8fd810f35932 195 SUPERFAMILY SSF103515 8 195 2.48E-13 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS19460 82813558a155e8b0843b8fd810f35932 195 Pfam PF03797 Autotransporter beta-domain 67 173 1.0E-10 T 29-03-2018 IPR005546 Autotransporter beta-domain AM460_RS19460 82813558a155e8b0843b8fd810f35932 195 Gene3D G3DSA:2.40.128.130 1 66 2.4E-5 T 29-03-2018 AM460_RS19460 82813558a155e8b0843b8fd810f35932 195 Gene3D G3DSA:2.40.128.130 67 195 3.7E-14 T 29-03-2018 AM460_RS24730 1de5afd5939717ab0ba3efa6a8672483 310 Pfam PF03466 LysR substrate binding domain 91 280 1.4E-19 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS24730 1de5afd5939717ab0ba3efa6a8672483 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 4.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS24730 1de5afd5939717ab0ba3efa6a8672483 310 SUPERFAMILY SSF46785 8 91 6.24E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24730 1de5afd5939717ab0ba3efa6a8672483 310 SUPERFAMILY SSF53850 91 293 3.44E-19 T 29-03-2018 AM460_RS24730 1de5afd5939717ab0ba3efa6a8672483 310 Gene3D G3DSA:3.40.190.10 184 270 2.0E-5 T 29-03-2018 AM460_RS24730 1de5afd5939717ab0ba3efa6a8672483 310 Gene3D G3DSA:3.40.190.10 92 183 4.5E-7 T 29-03-2018 AM460_RS24730 1de5afd5939717ab0ba3efa6a8672483 310 Gene3D G3DSA:1.10.10.10 2 87 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24415 2803dfeb0ae7ed649845703d52f5fbb8 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.3E-33 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AM460_RS24415 2803dfeb0ae7ed649845703d52f5fbb8 94 Gene3D G3DSA:2.60.120.10 3 93 1.5E-35 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS24415 2803dfeb0ae7ed649845703d52f5fbb8 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.868 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AM460_RS24415 2803dfeb0ae7ed649845703d52f5fbb8 94 SUPERFAMILY SSF51182 1 94 6.85E-33 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS26390 c6262d9a55e58b3ca578502ee27a2ff0 343 Pfam PF02387 IncFII RepA protein family 58 333 1.2E-43 T 29-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 AM460_RS20175 d5bb5ca9c52fff494b56f4dc20ba61ee 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM460_RS20175 d5bb5ca9c52fff494b56f4dc20ba61ee 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM460_RS20175 d5bb5ca9c52fff494b56f4dc20ba61ee 260 SUPERFAMILY SSF117143 93 222 9.94E-35 T 29-03-2018 AM460_RS20175 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 4.5E-117 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AM460_RS20175 d5bb5ca9c52fff494b56f4dc20ba61ee 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.2E-26 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM460_RS20175 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 2.4E-29 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM460_RS20175 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 9.5E-49 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM460_RS13745 33282d6ef85bb718cd9e7e41804839d9 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS13745 33282d6ef85bb718cd9e7e41804839d9 243 SUPERFAMILY SSF46955 3 90 1.74E-19 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS13745 33282d6ef85bb718cd9e7e41804839d9 243 Gene3D G3DSA:1.10.1660.10 1 236 2.2E-25 T 29-03-2018 AM460_RS13745 33282d6ef85bb718cd9e7e41804839d9 243 SMART SM00422 4 73 5.2E-29 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS13745 33282d6ef85bb718cd9e7e41804839d9 243 Pfam PF13411 MerR HTH family regulatory protein 4 72 2.3E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS21970 f07736405e77d34a5b38d7f3018c699a 107 Gene3D G3DSA:3.30.110.70 1 105 2.9E-37 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 AM460_RS21970 f07736405e77d34a5b38d7f3018c699a 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.701 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AM460_RS21970 f07736405e77d34a5b38d7f3018c699a 107 SUPERFAMILY SSF117782 1 106 9.16E-39 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AM460_RS21970 f07736405e77d34a5b38d7f3018c699a 107 Pfam PF01906 Putative heavy-metal-binding 1 104 2.7E-40 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AM460_RS10520 3112361c36b3e51d2697ad92e4e5b30d 236 Gene3D G3DSA:3.90.550.10 1 236 8.9E-54 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS10520 3112361c36b3e51d2697ad92e4e5b30d 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 4.4E-95 T 29-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM460_RS10520 3112361c36b3e51d2697ad92e4e5b30d 236 SUPERFAMILY SSF53448 8 227 5.85E-62 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS10520 3112361c36b3e51d2697ad92e4e5b30d 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 227 44.959 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM460_RS10520 3112361c36b3e51d2697ad92e4e5b30d 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 29-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM460_RS10520 3112361c36b3e51d2697ad92e4e5b30d 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 4.7E-81 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM460_RS06145 ae7cf50898cb3daa219085b1302c231f 438 Gene3D G3DSA:3.40.190.10 141 434 4.3E-46 T 29-03-2018 AM460_RS06145 ae7cf50898cb3daa219085b1302c231f 438 SUPERFAMILY SSF53850 25 425 1.86E-77 T 29-03-2018 AM460_RS06145 ae7cf50898cb3daa219085b1302c231f 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 9.9E-46 T 29-03-2018 AM460_RS06145 ae7cf50898cb3daa219085b1302c231f 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AM460_RS06220 73bfa8bbf314399ad71bb3a101db6340 400 SUPERFAMILY SSF102405 98 290 7.02E-28 T 29-03-2018 AM460_RS06220 73bfa8bbf314399ad71bb3a101db6340 400 Gene3D G3DSA:1.10.10.10 317 400 0.0077 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06220 73bfa8bbf314399ad71bb3a101db6340 400 Gene3D G3DSA:3.40.50.450 125 299 6.7E-24 T 29-03-2018 AM460_RS06220 73bfa8bbf314399ad71bb3a101db6340 400 Pfam PF02481 DNA recombination-mediator protein A 89 292 7.5E-46 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM460_RS08240 0317904f208a368a4fceec503dcc5489 553 SMART SM00244 30 199 7.1E-25 T 29-03-2018 IPR001107 Band 7 domain AM460_RS08240 0317904f208a368a4fceec503dcc5489 553 SUPERFAMILY SSF117892 61 202 2.62E-23 T 29-03-2018 IPR001107 Band 7 domain AM460_RS08240 0317904f208a368a4fceec503dcc5489 553 Pfam PF15975 Flotillin 406 530 3.7E-37 T 29-03-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 AM460_RS08240 0317904f208a368a4fceec503dcc5489 553 Pfam PF01145 SPFH domain / Band 7 family 44 215 5.5E-18 T 29-03-2018 IPR001107 Band 7 domain AM460_RS24260 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 17.147 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS24260 0f0feee8b183ef8c8fdd4ac0df27ae16 80 PIRSF PIRSF006488 1 80 1.1E-24 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS24260 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Pfam PF02609 Exonuclease VII small subunit 11 62 7.7E-22 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS24260 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Gene3D G3DSA:1.10.287.1040 8 75 6.1E-27 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS24260 0f0feee8b183ef8c8fdd4ac0df27ae16 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-24 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS24260 0f0feee8b183ef8c8fdd4ac0df27ae16 80 SUPERFAMILY SSF116842 3 73 4.45E-23 T 29-03-2018 AM460_RS24260 0f0feee8b183ef8c8fdd4ac0df27ae16 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 1.0E-21 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 Gene3D G3DSA:3.20.20.140 78 325 3.0E-116 T 29-03-2018 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 PIRSF PIRSF001238 8 389 1.8E-158 T 29-03-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 SUPERFAMILY SSF51338 346 388 8.64E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 SUPERFAMILY SSF51556 63 346 3.63E-72 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 Gene3D G3DSA:2.30.40.10 326 373 5.9E-4 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 Gene3D G3DSA:2.30.40.10 9 77 4.6E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 SUPERFAMILY SSF51338 3 77 2.54E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 Pfam PF01979 Amidohydrolase family 264 374 4.0E-6 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS00775 a7b0c029bd22f743a35c131f9888e2b8 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 9 388 4.7E-188 T 29-03-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 AM460_RS10990 5f79c6976cb4d5332bd8403dc40a2a0a 325 Gene3D G3DSA:3.60.130.10 15 325 1.3E-62 T 29-03-2018 AM460_RS10990 5f79c6976cb4d5332bd8403dc40a2a0a 325 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 16 314 1.0E-158 T 29-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 AM460_RS10990 5f79c6976cb4d5332bd8403dc40a2a0a 325 Hamap MF_01083 Protein CsiD [csiD]. 1 325 77.143 T 29-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 AM460_RS10990 5f79c6976cb4d5332bd8403dc40a2a0a 325 Pfam PF08943 CsiD 21 314 3.9E-149 T 29-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 AM460_RS10990 5f79c6976cb4d5332bd8403dc40a2a0a 325 SUPERFAMILY SSF51197 17 323 1.65E-93 T 29-03-2018 AM460_RS26815 d3e11be11b12f8e50920ca9de4e07e71 77 Gene3D G3DSA:3.30.160.130 9 77 1.2E-39 T 29-03-2018 AM460_RS26815 d3e11be11b12f8e50920ca9de4e07e71 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 10 76 3.7E-35 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS26815 d3e11be11b12f8e50920ca9de4e07e71 77 SUPERFAMILY SSF54786 14 77 5.89E-29 T 29-03-2018 AM460_RS26815 d3e11be11b12f8e50920ca9de4e07e71 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 8 77 5.0E-34 T 29-03-2018 IPR009253 Protein of unknown function DUF905 AM460_RS25695 b33785388ed7fee27027fd1c6f05e055 256 Pfam PF01061 ABC-2 type transporter 9 218 2.4E-39 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM460_RS25695 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS25695 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS25695 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS25695 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS25695 b33785388ed7fee27027fd1c6f05e055 256 PIRSF PIRSF006648 11 252 1.6E-22 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 Gene3D G3DSA:2.40.160.20 22 171 1.0E-20 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 SUPERFAMILY SSF56925 27 171 2.62E-34 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 163 171 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 132 153 1.7E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 159 170 1.7E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 1.7E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 1.7E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM460_RS22245 1f42062652e327a66a7fccdab455504e 171 Pfam PF13505 Outer membrane protein beta-barrel domain 9 171 4.3E-23 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AM460_RS19670 e0e80df82b862e55e405d8688d9932fb 439 SUPERFAMILY SSF52096 73 197 6.5E-32 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS19670 e0e80df82b862e55e405d8688d9932fb 439 SUPERFAMILY SSF52096 228 287 6.5E-32 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS19670 e0e80df82b862e55e405d8688d9932fb 439 Pfam PF01343 Peptidase family S49 150 297 2.4E-43 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM460_RS19670 e0e80df82b862e55e405d8688d9932fb 439 Gene3D G3DSA:3.90.226.10 74 356 1.8E-27 T 29-03-2018 AM460_RS05285 ba21d2f6cb0e1c17a9887b4c4107e5eb 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 18 367 2.1E-13 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS05285 ba21d2f6cb0e1c17a9887b4c4107e5eb 378 SUPERFAMILY SSF111369 167 267 1.28E-5 T 29-03-2018 AM460_RS05285 ba21d2f6cb0e1c17a9887b4c4107e5eb 378 SUPERFAMILY SSF111369 60 133 1.31E-10 T 29-03-2018 AM460_RS05285 ba21d2f6cb0e1c17a9887b4c4107e5eb 378 Gene3D G3DSA:2.40.50.100 212 354 1.8E-4 T 29-03-2018 AM460_RS05285 ba21d2f6cb0e1c17a9887b4c4107e5eb 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 301 3.1E-9 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS05285 ba21d2f6cb0e1c17a9887b4c4107e5eb 378 Gene3D G3DSA:2.40.50.100 63 136 6.8E-12 T 29-03-2018 AM460_RS17995 9f8b93af1f3bc89fc8d38fece45ca20c 306 SUPERFAMILY SSF53474 9 143 7.8E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS17995 9f8b93af1f3bc89fc8d38fece45ca20c 306 SUPERFAMILY SSF53474 194 306 7.8E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS17995 9f8b93af1f3bc89fc8d38fece45ca20c 306 Gene3D G3DSA:3.40.50.1820 3 306 8.6E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS17995 9f8b93af1f3bc89fc8d38fece45ca20c 306 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 163 2.9E-9 T 29-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AM460_RS15075 5620801d9d7a8c0067fcde3b72cad860 328 Gene3D G3DSA:3.40.50.1100 146 328 6.5E-25 T 29-03-2018 AM460_RS15075 5620801d9d7a8c0067fcde3b72cad860 328 Gene3D G3DSA:3.40.50.1100 50 145 9.1E-30 T 29-03-2018 AM460_RS15075 5620801d9d7a8c0067fcde3b72cad860 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 80.065 T 29-03-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 AM460_RS15075 5620801d9d7a8c0067fcde3b72cad860 328 PIRSF PIRSF006278 2 328 2.8E-93 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AM460_RS15075 5620801d9d7a8c0067fcde3b72cad860 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 316 1.9E-53 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS15075 5620801d9d7a8c0067fcde3b72cad860 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 1.9E-145 T 29-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 AM460_RS15075 5620801d9d7a8c0067fcde3b72cad860 328 SUPERFAMILY SSF53686 7 326 9.95E-87 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS17580 20ed865c60a47990b9a04bf3cd2a25bf 378 Pfam PF01609 Transposase DDE domain 102 343 4.4E-30 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM460_RS17580 20ed865c60a47990b9a04bf3cd2a25bf 378 Gene3D G3DSA:3.90.350.10 100 308 2.2E-6 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AM460_RS17580 20ed865c60a47990b9a04bf3cd2a25bf 378 Pfam PF13808 DDE_Tnp_1-associated 7 94 1.0E-32 T 29-03-2018 IPR032806 H repeat-associated protein, N-terminal AM460_RS06350 0089d40d675f68dce7bf51cc4b18ad20 78 Gene3D G3DSA:1.10.10.10 1 76 1.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06350 0089d40d675f68dce7bf51cc4b18ad20 78 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 24.331 T 29-03-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor AM460_RS06350 0089d40d675f68dce7bf51cc4b18ad20 78 Pfam PF09012 FeoC like transcriptional regulator 3 71 1.2E-15 T 29-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AM460_RS06350 0089d40d675f68dce7bf51cc4b18ad20 78 SUPERFAMILY SSF46785 1 76 9.93E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 Gene3D G3DSA:3.40.50.150 193 473 6.3E-63 T 29-03-2018 AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 501 6.9E-195 T 29-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 Pfam PF12161 HsdM N-terminal domain 10 157 7.0E-16 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 Pfam PF02384 N-6 DNA Methylase 171 479 1.3E-115 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 356 2.7E-21 T 29-03-2018 AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 2.7E-21 T 29-03-2018 AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 2.7E-21 T 29-03-2018 AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 221 235 2.7E-21 T 29-03-2018 AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 SUPERFAMILY SSF53335 9 47 1.18E-124 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 SUPERFAMILY SSF53335 80 512 1.18E-124 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS27755 d0cdc628d94011fe65e6b9394b863247 518 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 297 303 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS09270 89d7c000a52e163711955812cfd02dba 357 SUPERFAMILY SSF48452 69 280 2.8E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS09270 89d7c000a52e163711955812cfd02dba 357 Gene3D G3DSA:1.25.40.10 36 173 4.5E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS09270 89d7c000a52e163711955812cfd02dba 357 SMART SM00028 125 158 39.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS09270 89d7c000a52e163711955812cfd02dba 357 SMART SM00028 72 105 96.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS09270 89d7c000a52e163711955812cfd02dba 357 SMART SM00028 191 224 22.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM460_RS09270 89d7c000a52e163711955812cfd02dba 357 Gene3D G3DSA:1.25.40.10 174 335 1.2E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 SUPERFAMILY SSF53335 7 283 6.61E-89 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 29-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 Pfam PF01564 Spermine/spermidine synthase domain 60 239 8.5E-68 T 29-03-2018 AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 Gene3D G3DSA:3.40.50.150 57 288 2.0E-44 T 29-03-2018 AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 2.6E-125 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.156 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 5.8E-21 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM460_RS25730 4fc1f159199ab6fff0594d5a308ddcdd 288 Gene3D G3DSA:2.30.140.10 1 54 2.3E-17 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 Gene3D G3DSA:2.40.50.140 5 82 2.9E-35 T 29-03-2018 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 29-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 SUPERFAMILY SSF50249 5 82 7.28E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 4.8E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 4.8E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 4.8E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 Pfam PF00366 Ribosomal protein S17 10 76 1.5E-34 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.238 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06865 269efc68924760e54d96bb26e1d8210a 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.0E-38 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS04685 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS04685 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 29-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS04685 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS04685 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS04685 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS17275 3151776eac2cda0732b43be213c3b8ec 72 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 1 72 3.0E-28 T 29-03-2018 IPR025732 MarB protein AM460_RS17275 3151776eac2cda0732b43be213c3b8ec 72 Pfam PF13999 MarB protein 6 70 9.9E-34 T 29-03-2018 IPR025732 MarB protein AM460_RS17255 8d95c82cbb764a317c493eac731af25a 296 Gene3D G3DSA:3.30.70.270 126 295 4.9E-47 T 29-03-2018 AM460_RS17255 8d95c82cbb764a317c493eac731af25a 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 127 285 6.5E-39 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17255 8d95c82cbb764a317c493eac731af25a 296 SMART SM00267 118 287 1.4E-61 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17255 8d95c82cbb764a317c493eac731af25a 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 283 4.8E-45 T 29-03-2018 IPR000160 GGDEF domain AM460_RS17255 8d95c82cbb764a317c493eac731af25a 296 SUPERFAMILY SSF55073 134 289 2.04E-41 T 29-03-2018 IPR029787 Nucleotide cyclase AM460_RS22225 7b71740b12a1db903033d68260a33d5b 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 1.1E-10 T 29-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 AM460_RS22225 7b71740b12a1db903033d68260a33d5b 155 SUPERFAMILY SSF46785 48 117 1.89E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS22225 7b71740b12a1db903033d68260a33d5b 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 149 1.2E-14 T 29-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AM460_RS22225 7b71740b12a1db903033d68260a33d5b 155 SUPERFAMILY SSF47979 95 150 4.84E-15 T 29-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AM460_RS22225 7b71740b12a1db903033d68260a33d5b 155 Gene3D G3DSA:1.10.60.10 95 149 1.9E-21 T 29-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AM460_RS22225 7b71740b12a1db903033d68260a33d5b 155 SMART SM00529 56 155 1.6E-44 T 29-03-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 AM460_RS22225 7b71740b12a1db903033d68260a33d5b 155 Gene3D G3DSA:1.10.10.10 24 94 6.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 Gene3D G3DSA:3.40.50.300 3 234 1.1E-50 T 29-03-2018 AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.9E-28 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 2.1E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 SUPERFAMILY SSF52540 84 363 4.68E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 SMART SM00487 28 234 1.4E-52 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.868 T 29-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 Gene3D G3DSA:3.40.50.300 235 420 9.4E-44 T 29-03-2018 AM460_RS04295 9e62102c3fed86ead29103fc484a13af 421 SMART SM00490 270 351 8.2E-31 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 Gene3D G3DSA:1.10.8.10 241 270 5.0E-9 T 29-03-2018 AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 Gene3D G3DSA:1.10.8.10 272 297 0.0077 T 29-03-2018 AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 29-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 SUPERFAMILY SSF53697 6 249 1.62E-65 T 29-03-2018 AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 Gene3D G3DSA:3.40.50.10490 10 240 1.1E-49 T 29-03-2018 AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 Pfam PF01380 SIS domain 129 208 1.3E-7 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 296 6.2E-154 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM460_RS12195 0f6ed5a8982ae27778523ca7f5359157 298 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 42.217 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM460_RS13145 953a383e057175bf1bc9183454c0f221 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM460_RS13145 953a383e057175bf1bc9183454c0f221 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 1.4E-10 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS13145 953a383e057175bf1bc9183454c0f221 84 SUPERFAMILY SSF54292 3 83 1.84E-21 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS13145 953a383e057175bf1bc9183454c0f221 84 Gene3D G3DSA:3.10.20.30 1 84 2.1E-15 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS11595 ee3a02eae40f131acbf9a4d779967ba7 86 Gene3D G3DSA:3.30.70.20 2 84 8.5E-16 T 29-03-2018 AM460_RS11595 ee3a02eae40f131acbf9a4d779967ba7 86 SUPERFAMILY SSF54862 5 63 1.93E-17 T 29-03-2018 AM460_RS11595 ee3a02eae40f131acbf9a4d779967ba7 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.0E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS11595 ee3a02eae40f131acbf9a4d779967ba7 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS20565 0114f6ae7e1075852c5a91092266417a 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 1.5E-27 T 29-03-2018 AM460_RS20565 0114f6ae7e1075852c5a91092266417a 101 Hamap MF_01155 Chaperone modulatory protein CbpM [cbpM]. 1 97 24.819 T 29-03-2018 IPR022835 Chaperone modulatory protein CbpM AM460_RS20565 0114f6ae7e1075852c5a91092266417a 101 Gene3D G3DSA:1.10.1660.10 5 77 5.2E-4 T 29-03-2018 AM460_RS20565 0114f6ae7e1075852c5a91092266417a 101 Gene3D G3DSA:1.20.5.490 78 92 0.0012 T 29-03-2018 AM460_RS21605 d84e5a199013f0f4711459c3ce98c364 88 SUPERFAMILY SSF46785 2 53 2.47E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS21605 d84e5a199013f0f4711459c3ce98c364 88 Gene3D G3DSA:1.10.10.10 1 64 1.7E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS16580 6e73be14c49ac83abdaa1e997516daed 421 Gene3D G3DSA:1.20.1250.20 3 188 1.5E-22 T 29-03-2018 AM460_RS16580 6e73be14c49ac83abdaa1e997516daed 421 Gene3D G3DSA:1.20.1250.20 198 393 2.2E-14 T 29-03-2018 AM460_RS16580 6e73be14c49ac83abdaa1e997516daed 421 SUPERFAMILY SSF103473 8 391 7.32E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS16580 6e73be14c49ac83abdaa1e997516daed 421 Pfam PF07690 Major Facilitator Superfamily 18 356 1.3E-29 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS06515 7c1e0bda976ccc7d1fcdd10eed598c54 301 Gene3D G3DSA:1.10.10.10 11 79 3.1E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06515 7c1e0bda976ccc7d1fcdd10eed598c54 301 Pfam PF14503 YhfZ C-terminal domain 75 301 1.0E-84 T 29-03-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain AM460_RS06515 7c1e0bda976ccc7d1fcdd10eed598c54 301 Gene3D G3DSA:3.40.190.10 200 300 1.0E-16 T 29-03-2018 AM460_RS06515 7c1e0bda976ccc7d1fcdd10eed598c54 301 Gene3D G3DSA:3.40.190.10 80 199 1.2E-38 T 29-03-2018 AM460_RS06515 7c1e0bda976ccc7d1fcdd10eed598c54 301 SUPERFAMILY SSF53850 74 301 3.33E-82 T 29-03-2018 AM460_RS06515 7c1e0bda976ccc7d1fcdd10eed598c54 301 Pfam PF14502 Helix-turn-helix domain 24 71 5.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 Gene3D G3DSA:3.90.1170.20 10 156 2.3E-42 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 Gene3D G3DSA:3.20.20.70 157 286 3.6E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 SUPERFAMILY SSF54675 14 130 1.39E-32 T 29-03-2018 AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 4.2E-63 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 3.8E-24 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 PIRSF PIRSF006250 17 297 2.4E-115 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 8.0E-105 T 29-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AM460_RS25840 ce1316cdd95daf446802bb8bd7d429ff 297 SUPERFAMILY SSF51690 131 296 9.81E-60 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM460_RS15370 9bda2a9275d2ff5ef6a2848fd6511ac0 113 SUPERFAMILY SSF160719 9 106 5.89E-28 T 29-03-2018 AM460_RS15370 9bda2a9275d2ff5ef6a2848fd6511ac0 113 Pfam PF04965 Gene 25-like lysozyme 14 82 1.4E-16 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM460_RS15370 9bda2a9275d2ff5ef6a2848fd6511ac0 113 Gene3D G3DSA:3.10.450.40 2 108 1.0E-25 T 29-03-2018 AM460_RS06195 0a85665a4e885ac907bb5bb8ec7dcb02 231 Gene3D G3DSA:2.60.120.10 11 131 1.5E-48 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS06195 0a85665a4e885ac907bb5bb8ec7dcb02 231 Gene3D G3DSA:2.60.120.10 132 231 1.6E-24 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS06195 0a85665a4e885ac907bb5bb8ec7dcb02 231 Pfam PF02678 Pirin 7 119 1.0E-37 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM460_RS06195 0a85665a4e885ac907bb5bb8ec7dcb02 231 PIRSF PIRSF006232 1 230 3.1E-57 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM460_RS06195 0a85665a4e885ac907bb5bb8ec7dcb02 231 SUPERFAMILY SSF51182 1 231 3.89E-80 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 152 5.2E-75 T 29-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 SUPERFAMILY SSF46955 12 134 5.13E-28 T 29-03-2018 IPR009061 Putative DNA-binding domain AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 Gene3D G3DSA:1.10.1660.10 8 66 8.5E-19 T 29-03-2018 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 5.9E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 5.9E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 5.9E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 SMART SM00422 12 80 3.7E-23 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 Pfam PF09278 MerR, DNA binding 54 119 1.1E-15 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 Pfam PF00376 MerR family regulatory protein 13 49 1.4E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM460_RS02595 95bf264d2f7098adb5f377ea39f2c7ac 154 Gene3D G3DSA:1.10.1660.10 67 142 6.3E-11 T 29-03-2018 AM460_RS16215 783480ea6f4e81fa65834be0d701c02b 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.5E-9 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM460_RS16215 783480ea6f4e81fa65834be0d701c02b 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM460_RS16225 bf4ac5a34a37350d30a35509dee5d4a9 217 Gene3D G3DSA:3.40.50.300 1 201 5.4E-46 T 29-03-2018 AM460_RS16225 bf4ac5a34a37350d30a35509dee5d4a9 217 SMART SM00382 26 214 1.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS16225 bf4ac5a34a37350d30a35509dee5d4a9 217 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS16225 bf4ac5a34a37350d30a35509dee5d4a9 217 Pfam PF00005 ABC transporter 17 161 7.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS16225 bf4ac5a34a37350d30a35509dee5d4a9 217 SUPERFAMILY SSF52540 1 197 1.3E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 SUPERFAMILY SSF53335 16 257 1.5E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 237 257 2.5E-39 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 68 88 2.5E-39 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 195 212 2.5E-39 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 214 232 2.5E-39 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 2.5E-39 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 Gene3D G3DSA:3.40.50.150 11 290 2.5E-62 T 29-03-2018 AM460_RS07120 1b62938192205ec2fa6880625e1a05df 294 Pfam PF01555 DNA methylase 34 250 1.9E-53 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 PIRSF PIRSF000097 118 285 3.9E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 PIRSF PIRSF000097 5 122 4.5E-36 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 Gene3D G3DSA:3.20.20.100 5 281 1.5E-83 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 PRINTS PR00069 Aldo-keto reductase signature 101 119 7.0E-39 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 PRINTS PR00069 Aldo-keto reductase signature 130 147 7.0E-39 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 PRINTS PR00069 Aldo-keto reductase signature 40 64 7.0E-39 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 PRINTS PR00069 Aldo-keto reductase signature 164 193 7.0E-39 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 PRINTS PR00069 Aldo-keto reductase signature 203 227 7.0E-39 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 SUPERFAMILY SSF51430 10 270 4.58E-81 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 Pfam PF00248 Aldo/keto reductase family 23 267 8.5E-40 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 236 251 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS24865 57b72a54200aeb7de1326cbe56b4f10e 294 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS11055 46023d40f377302321676b525790b90e 224 Gene3D G3DSA:2.10.109.10 96 217 6.2E-19 T 29-03-2018 AM460_RS11055 46023d40f377302321676b525790b90e 224 Pfam PF00717 Peptidase S24-like 133 200 7.6E-16 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS11055 46023d40f377302321676b525790b90e 224 SUPERFAMILY SSF51306 90 214 1.96E-28 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 3.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 SUPERFAMILY SSF81442 43 560 3.4E-180 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 29-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 Gene3D G3DSA:1.20.210.10 43 561 1.9E-186 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 Gene3D G3DSA:1.10.287.70 573 640 3.9E-18 T 29-03-2018 AM460_RS24215 1beadb0d2dba113a9f7df7b60a9e8249 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 4.2E-135 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS08995 37b708ebf8b5a39144e72b7bc67f5fee 502 Gene3D G3DSA:1.20.1250.20 290 467 4.4E-19 T 29-03-2018 AM460_RS08995 37b708ebf8b5a39144e72b7bc67f5fee 502 Gene3D G3DSA:1.20.1250.20 23 224 6.1E-36 T 29-03-2018 AM460_RS08995 37b708ebf8b5a39144e72b7bc67f5fee 502 Pfam PF07690 Major Facilitator Superfamily 39 302 9.2E-26 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS08995 37b708ebf8b5a39144e72b7bc67f5fee 502 ProSitePatterns PS00216 Sugar transport proteins signature 1. 88 104 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS08995 37b708ebf8b5a39144e72b7bc67f5fee 502 Hamap MF_01238 Putative sialic acid transporter [nanT]. 14 501 56.257 T 29-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 AM460_RS08995 37b708ebf8b5a39144e72b7bc67f5fee 502 SUPERFAMILY SSF103473 284 465 2.35E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS08995 37b708ebf8b5a39144e72b7bc67f5fee 502 SUPERFAMILY SSF103473 22 220 2.35E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS21245 f075c44eb3d0c19c259be76db461b86a 204 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 79 199 2.1E-23 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Gene3D G3DSA:3.30.870.10 502 688 4.0E-31 T 29-03-2018 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Gene3D G3DSA:1.20.58.310 9 108 2.5E-34 T 29-03-2018 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF56024 320 499 1.48E-56 T 29-03-2018 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 4.2E-143 T 29-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF56024 503 685 2.92E-68 T 29-03-2018 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.1E-31 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 PIRSF PIRSF015589 1 688 7.7E-240 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF143724 107 313 1.43E-59 T 29-03-2018 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 679 3.5E-257 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 683 27.268 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF140356 3 105 8.11E-34 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Gene3D G3DSA:3.30.1840.10 109 307 5.9E-52 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Pfam PF02503 Polyphosphate kinase middle domain 119 319 8.7E-42 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM460_RS11920 fef7d61148ba4ef64a1d1417e8547f3c 688 Gene3D G3DSA:3.30.870.10 316 501 2.3E-26 T 29-03-2018 AM460_RS21435 11ab989768b91ba2e5a297eb84e6bce3 357 Pfam PF05125 Phage major capsid protein, P2 family 8 340 3.0E-145 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM460_RS21435 11ab989768b91ba2e5a297eb84e6bce3 357 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 342 1.2E-93 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM460_RS15065 870c3066df4a05a83106a3973268971e 183 Gene3D G3DSA:1.10.150.130 84 175 2.0E-4 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS15065 870c3066df4a05a83106a3973268971e 183 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 167 9.1E-92 T 29-03-2018 IPR022523 Flagellar regulator, FliZ AM460_RS15065 870c3066df4a05a83106a3973268971e 183 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 164 1.6E-13 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM460_RS01840 33638e82fbad95adecb1715481bbd041 133 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 2 131 2.9E-42 T 29-03-2018 IPR019231 Protein of unknown function DUF2170 AM460_RS21225 4843e4410f3fdbfd43aab3be75923209 367 PIRSF PIRSF020481 1 366 2.2E-99 T 29-03-2018 IPR014507 Baseplate assembly protein J, predicted AM460_RS21225 4843e4410f3fdbfd43aab3be75923209 367 Pfam PF04865 Baseplate J-like protein 70 327 9.2E-74 T 29-03-2018 IPR006949 Baseplate protein J-like AM460_RS04235 5e48f84aa5ae7f1793eb12dc593c0fcd 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 1.1E-8 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM460_RS04235 5e48f84aa5ae7f1793eb12dc593c0fcd 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.967 T 29-03-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 AM460_RS12175 52763e221e549331e25fae0a4a8009fd 149 Pfam PF11143 Protein of unknown function (DUF2919) 6 145 1.5E-48 T 29-03-2018 IPR021318 Protein of unknown function DUF2919 AM460_RS25710 83e24d1b011dea566c31f593927c9702 178 Gene3D G3DSA:3.40.50.2020 1 174 2.2E-41 T 29-03-2018 AM460_RS25710 83e24d1b011dea566c31f593927c9702 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 3.6E-23 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM460_RS25710 83e24d1b011dea566c31f593927c9702 178 SUPERFAMILY SSF53271 3 173 1.97E-53 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS25710 83e24d1b011dea566c31f593927c9702 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 1.3E-73 T 29-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AM460_RS01800 aa7e9378acc372795492f11cc4ea8059 91 Gene3D G3DSA:3.30.1660.10 32 90 4.4E-19 T 29-03-2018 IPR025543 Dodecin-like AM460_RS01800 aa7e9378acc372795492f11cc4ea8059 91 SUPERFAMILY SSF159871 11 90 1.44E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS01800 aa7e9378acc372795492f11cc4ea8059 91 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 1.1E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS17075 e06fd2eba550ce651a91259cd20ba306 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 2.7E-203 T 29-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM460_RS17075 e06fd2eba550ce651a91259cd20ba306 462 SUPERFAMILY SSF52467 289 462 1.54E-78 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS17075 e06fd2eba550ce651a91259cd20ba306 462 PIRSF PIRSF000204 1 462 8.0E-239 T 29-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AM460_RS17075 e06fd2eba550ce651a91259cd20ba306 462 Gene3D G3DSA:3.40.50.1220 289 462 2.7E-91 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS04455 a2ea77af70193144cfef5c74f92f70d7 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 8.0E-202 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM460_RS04455 a2ea77af70193144cfef5c74f92f70d7 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.363 T 29-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup AM460_RS04455 a2ea77af70193144cfef5c74f92f70d7 622 Pfam PF02705 K+ potassium transporter 14 544 1.0E-205 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM460_RS23380 115ef7c584d948510b537fbdd38c5833 386 SUPERFAMILY SSF53383 10 386 7.8E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS23380 115ef7c584d948510b537fbdd38c5833 386 Pfam PF00155 Aminotransferase class I and II 32 383 3.4E-57 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS23380 115ef7c584d948510b537fbdd38c5833 386 Gene3D G3DSA:3.40.640.10 45 271 6.7E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS23380 115ef7c584d948510b537fbdd38c5833 386 Gene3D G3DSA:3.90.1150.10 272 386 3.3E-28 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS17365 293a60f924f3b340881f8bdd738b3df7 440 Pfam PF07804 HipA-like C-terminal domain 149 402 1.1E-51 T 29-03-2018 IPR012893 HipA-like, C-terminal AM460_RS17365 293a60f924f3b340881f8bdd738b3df7 440 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 2.0E-30 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AM460_RS17365 293a60f924f3b340881f8bdd738b3df7 440 Pfam PF13657 HipA N-terminal domain 7 103 2.1E-24 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AM460_RS17270 7a26d7775b37bb730a06d191cde9c324 299 SUPERFAMILY SSF103481 206 287 1.02E-7 T 29-03-2018 AM460_RS17270 7a26d7775b37bb730a06d191cde9c324 299 SUPERFAMILY SSF103481 42 132 7.98E-11 T 29-03-2018 AM460_RS17270 7a26d7775b37bb730a06d191cde9c324 299 Pfam PF00892 EamA-like transporter family 7 130 1.5E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS17270 7a26d7775b37bb730a06d191cde9c324 299 Pfam PF00892 EamA-like transporter family 143 286 3.9E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS11680 d303164ae6e62895458d38ab86b6ced9 332 Gene3D G3DSA:1.10.3470.10 47 329 2.1E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS11680 d303164ae6e62895458d38ab86b6ced9 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 317 1.4E-41 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS20445 3fa937354b1924c4d1ca0f33678a5db0 137 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 136 3.0E-49 T 29-03-2018 AM460_RS20445 3fa937354b1924c4d1ca0f33678a5db0 137 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 3 126 1.4E-15 T 29-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 AM460_RS20445 3fa937354b1924c4d1ca0f33678a5db0 137 Pfam PF13994 PgaD-like protein 4 125 2.3E-16 T 29-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 AM460_RS21315 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 20 245 4.8E-18 T 29-03-2018 AM460_RS21315 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 8.0E-8 T 29-03-2018 IPR013690 IstB-like ATP binding N-terminal AM460_RS21315 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 52 228 8.3E-58 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS21315 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 4.3E-68 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS21315 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21315 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS18450 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 20 245 4.8E-18 T 29-03-2018 AM460_RS18450 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 8.0E-8 T 29-03-2018 IPR013690 IstB-like ATP binding N-terminal AM460_RS18450 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 52 228 8.3E-58 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS18450 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 4.3E-68 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS18450 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS18450 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS10095 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 20 245 4.8E-18 T 29-03-2018 AM460_RS10095 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 8.0E-8 T 29-03-2018 IPR013690 IstB-like ATP binding N-terminal AM460_RS10095 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 52 228 8.3E-58 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS10095 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 4.3E-68 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS10095 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10095 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS14350 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 20 245 4.8E-18 T 29-03-2018 AM460_RS14350 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 8.0E-8 T 29-03-2018 IPR013690 IstB-like ATP binding N-terminal AM460_RS14350 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 52 228 8.3E-58 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS14350 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 4.3E-68 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS14350 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14350 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS00215 9b90291244a6893c80b1298e3e5413e7 259 SUPERFAMILY SSF51569 6 246 2.2E-82 T 29-03-2018 AM460_RS00215 9b90291244a6893c80b1298e3e5413e7 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 6.5E-54 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS00215 9b90291244a6893c80b1298e3e5413e7 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 55.255 T 29-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM460_RS00215 9b90291244a6893c80b1298e3e5413e7 259 PIRSF PIRSF001357 5 255 3.2E-78 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS00215 9b90291244a6893c80b1298e3e5413e7 259 SMART SM01133 10 246 6.8E-81 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS00215 9b90291244a6893c80b1298e3e5413e7 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 8.8E-89 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM460_RS00215 9b90291244a6893c80b1298e3e5413e7 259 Gene3D G3DSA:3.20.20.70 1 258 1.1E-81 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 Gene3D G3DSA:3.30.70.600 3 102 3.0E-34 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 SMART SM01403 7 101 8.9E-55 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 29-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.5E-34 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.5E-17 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.5E-17 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.5E-17 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06815 9d6129626f9f807a8ce60eb3fa40b527 103 SUPERFAMILY SSF54999 5 101 1.02E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 Pfam PF01380 SIS domain 39 169 4.5E-29 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 Pfam PF00571 CBS domain 199 256 7.5E-4 T 29-03-2018 IPR000644 CBS domain AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 Pfam PF00571 CBS domain 282 315 4.1E-4 T 29-03-2018 IPR000644 CBS domain AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 PIRSF PIRSF004692 1 321 1.4E-122 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 Gene3D G3DSA:3.10.580.10 267 319 5.3E-8 T 29-03-2018 AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 Gene3D G3DSA:3.10.580.10 198 266 3.2E-7 T 29-03-2018 AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 SUPERFAMILY SSF53697 10 255 8.45E-53 T 29-03-2018 AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 SUPERFAMILY SSF54631 261 317 1.34E-8 T 29-03-2018 AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 Gene3D G3DSA:3.40.50.10490 2 197 2.2E-45 T 29-03-2018 AM460_RS10730 fbcc913a64cd492481cfcaa6463c1258 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 3.2E-134 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM460_RS11145 c5048959423e7ef8d107ec9d16b60034 155 Pfam PF03245 Bacteriophage Rz lysis protein 30 153 7.8E-47 T 29-03-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 AM460_RS11145 c5048959423e7ef8d107ec9d16b60034 155 Gene3D G3DSA:1.20.5.170 20 153 3.8E-4 T 29-03-2018 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.4E-242 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 SUPERFAMILY SSF53901 262 386 1.5E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 PIRSF PIRSF000429 1 387 9.5E-132 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 Gene3D G3DSA:3.40.47.10 256 384 1.7E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.344 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 SUPERFAMILY SSF53901 1 259 1.92E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 3.1E-87 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 2.5E-49 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 Gene3D G3DSA:3.40.47.10 1 255 1.3E-55 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS03865 05131b15357becb9c88ea54edd33ef4c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.3E-145 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM460_RS25145 ea43b640bd5addafcc5a0508b84e6547 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 2.9E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS25145 ea43b640bd5addafcc5a0508b84e6547 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 2.9E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS25145 ea43b640bd5addafcc5a0508b84e6547 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 2.9E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS25145 ea43b640bd5addafcc5a0508b84e6547 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 2.9E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM460_RS25145 ea43b640bd5addafcc5a0508b84e6547 123 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 113 1.3E-18 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS25145 ea43b640bd5addafcc5a0508b84e6547 123 Gene3D G3DSA:2.30.330.10 32 120 9.7E-19 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS25145 ea43b640bd5addafcc5a0508b84e6547 123 SUPERFAMILY SSF101801 41 116 1.31E-18 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM460_RS17190 54660bbf25f0bf133109f2ee28f1c11c 108 SUPERFAMILY SSF103481 8 105 1.06E-5 T 29-03-2018 AM460_RS17190 54660bbf25f0bf133109f2ee28f1c11c 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.345 T 29-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM460_RS17190 54660bbf25f0bf133109f2ee28f1c11c 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 5.7E-49 T 29-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM460_RS21560 5eaebf421db874bbdccfe85e19b0f188 113 Pfam PF01381 Helix-turn-helix 12 57 4.8E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS21560 5eaebf421db874bbdccfe85e19b0f188 113 SMART SM00530 11 68 5.0E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS21560 5eaebf421db874bbdccfe85e19b0f188 113 Gene3D G3DSA:1.10.260.40 8 96 9.7E-14 T 29-03-2018 AM460_RS21560 5eaebf421db874bbdccfe85e19b0f188 113 SUPERFAMILY SSF47413 4 58 4.61E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS16285 175637082e739bfcd5f2390f3d160e27 447 Gene3D G3DSA:3.75.10.20 2 441 3.3E-220 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM460_RS16285 175637082e739bfcd5f2390f3d160e27 447 SUPERFAMILY SSF55909 3 441 5.1E-205 T 29-03-2018 AM460_RS16285 175637082e739bfcd5f2390f3d160e27 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 59.015 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM460_RS16285 175637082e739bfcd5f2390f3d160e27 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 440 2.6E-243 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM460_RS16285 175637082e739bfcd5f2390f3d160e27 447 Pfam PF04996 Succinylarginine dihydrolase 3 440 8.7E-214 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 SUPERFAMILY SSF52833 126 162 2.57E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 SUPERFAMILY SSF52833 42 99 2.57E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 PIRSF PIRSF015753 5 324 1.0E-133 T 29-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 SUPERFAMILY SSF47616 177 324 1.18E-35 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 257 6.3E-13 T 29-03-2018 AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 Gene3D G3DSA:3.40.30.10 42 188 2.6E-36 T 29-03-2018 AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 5.3E-23 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS07935 41f1f466a1dd6cb08042a92b6487025e 328 Gene3D G3DSA:1.20.1050.10 189 326 5.1E-42 T 29-03-2018 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.6E-262 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.4E-73 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:1.20.150.20 384 510 1.3E-46 T 29-03-2018 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-45 T 29-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:2.40.30.20 3 82 2.3E-27 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.882 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF47917 383 511 4.19E-46 T 29-03-2018 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.2E-12 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:3.40.50.300 83 375 4.3E-112 T 29-03-2018 AM460_RS04520 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF52540 96 381 9.43E-95 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS11290 ac673753aa9c4d9445293634b5eae8a4 96 SUPERFAMILY SSF54285 4 79 2.35E-26 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM460_RS11290 ac673753aa9c4d9445293634b5eae8a4 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.889 T 29-03-2018 IPR005346 RnfH protein AM460_RS11290 ac673753aa9c4d9445293634b5eae8a4 96 Pfam PF03658 RnfH family Ubiquitin 5 87 2.0E-34 T 29-03-2018 IPR005346 RnfH protein AM460_RS11290 ac673753aa9c4d9445293634b5eae8a4 96 Gene3D G3DSA:3.10.20.280 2 88 6.3E-34 T 29-03-2018 IPR005346 RnfH protein AM460_RS10160 4dc54474d7b0b75ba30ca57dd4690fbe 550 PRINTS PR01021 OMPA domain signature 483 499 5.5E-6 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS10160 4dc54474d7b0b75ba30ca57dd4690fbe 550 PRINTS PR01021 OMPA domain signature 468 483 5.5E-6 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS10160 4dc54474d7b0b75ba30ca57dd4690fbe 550 SUPERFAMILY SSF103088 414 538 4.84E-31 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS10160 4dc54474d7b0b75ba30ca57dd4690fbe 550 Pfam PF00691 OmpA family 437 533 3.7E-17 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS10160 4dc54474d7b0b75ba30ca57dd4690fbe 550 Gene3D G3DSA:3.30.1330.60 398 550 1.4E-33 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS15080 ccfb4a7497fbd98dafee3c38a9c78618 222 Gene3D G3DSA:1.10.3720.10 9 217 1.4E-46 T 29-03-2018 AM460_RS15080 ccfb4a7497fbd98dafee3c38a9c78618 222 SUPERFAMILY SSF161098 13 203 1.31E-52 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS15080 ccfb4a7497fbd98dafee3c38a9c78618 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.7E-34 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS15080 ccfb4a7497fbd98dafee3c38a9c78618 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 4.0E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18085 a766ef2d95078c2680caa2fcdaedad6e 430 Pfam PF01547 Bacterial extracellular solute-binding protein 43 325 3.0E-38 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AM460_RS18085 a766ef2d95078c2680caa2fcdaedad6e 430 SUPERFAMILY SSF53850 20 426 2.28E-58 T 29-03-2018 AM460_RS18085 a766ef2d95078c2680caa2fcdaedad6e 430 Gene3D G3DSA:3.40.190.10 20 196 2.1E-30 T 29-03-2018 AM460_RS18085 a766ef2d95078c2680caa2fcdaedad6e 430 Gene3D G3DSA:3.40.190.10 227 368 1.6E-5 T 29-03-2018 AM460_RS18655 fc6c4ccaa05c1e2d80b3eba61cbe9292 126 Gene3D G3DSA:3.30.1330.70 2 121 1.7E-26 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS18655 fc6c4ccaa05c1e2d80b3eba61cbe9292 126 SUPERFAMILY SSF103084 4 116 1.83E-31 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS18655 fc6c4ccaa05c1e2d80b3eba61cbe9292 126 Pfam PF05866 Endodeoxyribonuclease RusA 10 115 1.1E-16 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM460_RS18655 fc6c4ccaa05c1e2d80b3eba61cbe9292 126 PIRSF PIRSF001007 2 122 1.4E-52 T 29-03-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:3.40.50.2300 4 131 1.1E-34 T 29-03-2018 AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00072 Response regulator receiver domain 13 121 1.1E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:1.10.10.10 132 239 5.4E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF52172 6 138 9.96E-40 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF46894 142 234 3.97E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 1.6E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00862 156 232 2.2E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS13965 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00448 11 121 6.2E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS25660 a90a42b2b664a504d2aaed31aea5569c 283 Gene3D G3DSA:3.30.1300.10 180 283 6.3E-31 T 29-03-2018 AM460_RS25660 a90a42b2b664a504d2aaed31aea5569c 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 7.0E-104 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM460_RS25660 a90a42b2b664a504d2aaed31aea5569c 283 SUPERFAMILY SSF52374 3 281 1.69E-107 T 29-03-2018 AM460_RS25660 a90a42b2b664a504d2aaed31aea5569c 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 7.6E-131 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM460_RS25660 a90a42b2b664a504d2aaed31aea5569c 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.572 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM460_RS25660 a90a42b2b664a504d2aaed31aea5569c 283 Gene3D G3DSA:3.40.50.620 1 176 1.5E-77 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS25660 a90a42b2b664a504d2aaed31aea5569c 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 68 1.1E-7 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 9.7E-66 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 Gene3D G3DSA:3.40.50.150 492 702 3.1E-42 T 29-03-2018 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 Pfam PF02926 THUMP domain 23 153 4.4E-20 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.749 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 SUPERFAMILY SSF53335 258 373 9.43E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 SUPERFAMILY SSF53335 144 217 9.43E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 4.8E-5 T 29-03-2018 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 4.8E-5 T 29-03-2018 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 475 658 7.8E-20 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 Gene3D G3DSA:3.30.750.80 391 491 2.1E-8 T 29-03-2018 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 PIRSF PIRSF037618 1 702 7.9E-296 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 Gene3D G3DSA:3.40.50.150 169 390 2.0E-32 T 29-03-2018 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 SUPERFAMILY SSF53335 396 698 1.1E-69 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS20800 776a49bafe32a6c05db77fd4d88795d5 702 SMART SM00981 56 154 9.4E-20 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM460_RS04600 6b050f06e0dafc6e96e089f53890c27e 389 SUPERFAMILY SSF53474 137 389 1.49E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS04600 6b050f06e0dafc6e96e089f53890c27e 389 Pfam PF00756 Putative esterase 150 309 3.7E-18 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM460_RS04600 6b050f06e0dafc6e96e089f53890c27e 389 Gene3D G3DSA:3.40.50.1820 132 389 2.0E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS04600 6b050f06e0dafc6e96e089f53890c27e 389 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 44 103 4.6E-8 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM460_RS04600 6b050f06e0dafc6e96e089f53890c27e 389 Gene3D G3DSA:2.60.40.10 35 131 9.8E-15 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS04600 6b050f06e0dafc6e96e089f53890c27e 389 SUPERFAMILY SSF81296 45 109 4.37E-10 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS02445 7bdbf268a0718b5639ed805db6c6cd3a 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 478 6.7E-82 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM460_RS02445 7bdbf268a0718b5639ed805db6c6cd3a 488 Pfam PF02321 Outer membrane efflux protein 69 268 1.9E-9 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS02445 7bdbf268a0718b5639ed805db6c6cd3a 488 Pfam PF02321 Outer membrane efflux protein 295 476 1.3E-10 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS02445 7bdbf268a0718b5639ed805db6c6cd3a 488 SUPERFAMILY SSF56954 7 481 1.83E-71 T 29-03-2018 AM460_RS02445 7bdbf268a0718b5639ed805db6c6cd3a 488 Gene3D G3DSA:1.20.1600.10 25 484 4.1E-62 T 29-03-2018 AM460_RS16940 f1079bd913a36096dbb5a8246f6118d8 146 Pfam PF10754 Protein of unknown function (DUF2569) 6 144 4.0E-40 T 29-03-2018 IPR019690 Protein of unknown function DUF2569 AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 Gene3D G3DSA:2.40.50.140 259 325 1.2E-6 T 29-03-2018 AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 SUPERFAMILY SSF50331 239 329 9.07E-10 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 SMART SM00382 29 212 4.0E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 Gene3D G3DSA:3.40.50.300 1 240 1.4E-69 T 29-03-2018 AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 Pfam PF08402 TOBE domain 257 333 3.3E-17 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 SUPERFAMILY SSF52540 5 241 6.97E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS17675 2cce104b6c23ad6aa237923e9c4a1d25 337 Pfam PF00005 ABC transporter 21 162 8.7E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS20315 4e81499f5956ca060abee67787a397a7 847 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 64 745 52.448 T 29-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 AM460_RS20315 4e81499f5956ca060abee67787a397a7 847 SUPERFAMILY SSF53448 244 532 1.13E-25 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS20315 4e81499f5956ca060abee67787a397a7 847 Gene3D G3DSA:3.90.550.10 223 503 1.0E-18 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS20315 4e81499f5956ca060abee67787a397a7 847 Pfam PF00535 Glycosyl transferase family 2 246 428 3.8E-23 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS06690 060672dfd68b7a38af4aeef0f0890c4c 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 4.8E-55 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM460_RS06690 060672dfd68b7a38af4aeef0f0890c4c 128 Gene3D G3DSA:3.40.1260.10 1 128 3.9E-32 T 29-03-2018 AM460_RS06690 060672dfd68b7a38af4aeef0f0890c4c 128 Pfam PF02635 DsrE/DsrF-like family 1 128 1.0E-29 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM460_RS06690 060672dfd68b7a38af4aeef0f0890c4c 128 SUPERFAMILY SSF75169 1 128 7.65E-39 T 29-03-2018 IPR027396 DsrEFH-like AM460_RS06690 060672dfd68b7a38af4aeef0f0890c4c 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 41.225 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 SMART SM00448 7 120 1.2E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.7E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.7E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.7E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 Gene3D G3DSA:3.40.50.2300 6 131 2.2E-36 T 29-03-2018 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 1.6E-24 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 SUPERFAMILY SSF46894 137 210 7.48E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 SUPERFAMILY SSF52172 7 137 3.7E-34 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 Pfam PF00072 Response regulator receiver domain 9 121 2.6E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 SMART SM00421 151 208 3.4E-24 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS13370 642df7d8daa212b1a8c03ad6543354bb 215 Gene3D G3DSA:1.10.10.10 132 214 3.9E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20975 f42eb65764693bf0f21706ee45678197 260 Pfam PF01435 Peptidase family M48 83 255 5.2E-27 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM460_RS20975 f42eb65764693bf0f21706ee45678197 260 Gene3D G3DSA:3.30.2010.10 69 158 2.4E-18 T 29-03-2018 AM460_RS01575 51dcac77b3730d98af907e16a9b8d2bf 83 SMART SM00966 6 51 5.0E-7 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AM460_RS01575 51dcac77b3730d98af907e16a9b8d2bf 83 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 49 3.2E-9 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AM460_RS01575 51dcac77b3730d98af907e16a9b8d2bf 83 Gene3D G3DSA:2.10.260.10 1 83 7.5E-19 T 29-03-2018 AM460_RS01575 51dcac77b3730d98af907e16a9b8d2bf 83 SUPERFAMILY SSF89447 1 64 9.07E-15 T 29-03-2018 AM460_RS17575 51fb157dfff8f385568df418abb8759d 189 Pfam PF01613 Flavin reductase like domain 19 152 2.5E-14 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM460_RS17575 51fb157dfff8f385568df418abb8759d 189 Gene3D G3DSA:2.30.110.10 8 188 3.1E-35 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS17575 51fb157dfff8f385568df418abb8759d 189 SUPERFAMILY SSF50475 7 186 1.86E-37 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS17575 51fb157dfff8f385568df418abb8759d 189 SMART SM00903 14 158 5.1E-13 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM460_RS25945 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25945 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25945 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25945 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.847 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25945 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 6.4E-163 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM460_RS25945 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 Pfam PF00953 Glycosyl transferase family 4 99 284 8.2E-34 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM460_RS07865 e45a6199eb9ec98b0ea0d64bdf3b9719 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 438 3.0E-8 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM460_RS07865 e45a6199eb9ec98b0ea0d64bdf3b9719 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 5.2E-173 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS07865 e45a6199eb9ec98b0ea0d64bdf3b9719 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 55.738 T 29-03-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 AM460_RS03900 ac2c9754009c0175b55045aa01e09970 89 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 25.479 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM460_RS03900 ac2c9754009c0175b55045aa01e09970 89 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.8E-21 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM460_RS03900 ac2c9754009c0175b55045aa01e09970 89 Pfam PF02416 mttA/Hcf106 family 4 55 2.1E-15 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM460_RS15565 7050380a66a6a641d39cdf2de96472d1 214 PIRSF PIRSF002884 2 214 2.3E-87 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM460_RS15565 7050380a66a6a641d39cdf2de96472d1 214 SUPERFAMILY SSF75708 11 213 7.32E-66 T 29-03-2018 AM460_RS15565 7050380a66a6a641d39cdf2de96472d1 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 214 7.3E-76 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM460_RS15565 7050380a66a6a641d39cdf2de96472d1 214 Gene3D G3DSA:1.20.5.590 7 34 1.1E-16 T 29-03-2018 AM460_RS15565 7050380a66a6a641d39cdf2de96472d1 214 Gene3D G3DSA:1.10.287.500 36 168 3.0E-21 T 29-03-2018 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 Gene3D G3DSA:1.10.3080.10 16 461 1.8E-104 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 SUPERFAMILY SSF81340 15 453 1.96E-111 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 47.995 T 29-03-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 Pfam PF00654 Voltage gated chloride channel 89 437 5.6E-89 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 387 403 3.1E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 183 202 3.1E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 102 119 3.1E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 405 424 3.1E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS25530 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 352 372 3.1E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS16685 99130cb3839bbdd6f15a884373b5ac84 222 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS16685 99130cb3839bbdd6f15a884373b5ac84 222 Gene3D G3DSA:3.30.70.20 144 212 1.9E-14 T 29-03-2018 AM460_RS16685 99130cb3839bbdd6f15a884373b5ac84 222 Gene3D G3DSA:3.30.70.20 22 48 8.1E-4 T 29-03-2018 AM460_RS16685 99130cb3839bbdd6f15a884373b5ac84 222 Pfam PF13247 4Fe-4S dicluster domain 84 180 2.2E-21 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS16685 99130cb3839bbdd6f15a884373b5ac84 222 Gene3D G3DSA:3.30.70.20 109 143 9.7E-19 T 29-03-2018 AM460_RS16685 99130cb3839bbdd6f15a884373b5ac84 222 Gene3D G3DSA:3.30.70.20 49 108 5.7E-14 T 29-03-2018 AM460_RS16685 99130cb3839bbdd6f15a884373b5ac84 222 SUPERFAMILY SSF54862 34 219 3.77E-51 T 29-03-2018 AM460_RS04975 871bba712b41464f66a9b55f41b2bc23 569 Pfam PF05170 AsmA family 1 522 7.5E-25 T 29-03-2018 IPR007844 AsmA AM460_RS15785 641701ca2a971165e2b7e15b2a9cbea7 113 Pfam PF10709 Protein of unknown function (DUF2511) 26 113 3.5E-44 T 29-03-2018 IPR019648 Protein of unknown function DUF2511 AM460_RS14610 d5e3d7a720d0cedb73e68c71e92457d2 310 Gene3D G3DSA:2.40.440.10 91 232 1.5E-31 T 29-03-2018 AM460_RS14610 d5e3d7a720d0cedb73e68c71e92457d2 310 Gene3D G3DSA:3.10.350.10 35 86 4.5E-4 T 29-03-2018 AM460_RS14610 d5e3d7a720d0cedb73e68c71e92457d2 310 Pfam PF03734 L,D-transpeptidase catalytic domain 96 230 4.7E-20 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM460_RS14610 d5e3d7a720d0cedb73e68c71e92457d2 310 SUPERFAMILY SSF141523 174 231 1.11E-28 T 29-03-2018 AM460_RS14610 d5e3d7a720d0cedb73e68c71e92457d2 310 SUPERFAMILY SSF141523 95 146 1.11E-28 T 29-03-2018 AM460_RS22220 877a002638d6d03c0161fd42fef723ea 372 Pfam PF03600 Citrate transporter 30 304 1.2E-26 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM460_RS07805 10b5668980808f63c3f5f2330727d08c 154 Gene3D G3DSA:3.30.2310.20 10 135 6.0E-6 T 29-03-2018 AM460_RS07805 10b5668980808f63c3f5f2330727d08c 154 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 12 150 7.8E-55 T 29-03-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 Pfam PF00581 Rhodanese-like domain 165 270 2.2E-13 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 Pfam PF00581 Rhodanese-like domain 9 128 5.4E-18 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 SUPERFAMILY SSF52821 165 278 4.19E-33 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 Gene3D G3DSA:3.40.250.10 1 154 4.8E-32 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 SUPERFAMILY SSF52821 1 152 2.88E-41 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 Gene3D G3DSA:3.40.250.10 156 281 1.7E-27 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 SMART SM00450 155 275 2.0E-24 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS11790 06051d3794677be8fdf731bfaca0d0e0 281 SMART SM00450 7 132 1.3E-27 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS21000 517e4e0efda8196df99fa26a7c527ae8 227 PIRSF PIRSF028111 1 227 3.0E-91 T 29-03-2018 IPR016868 Bacteriophage B3, Orf5 AM460_RS21000 517e4e0efda8196df99fa26a7c527ae8 227 Pfam PF10979 Protein of unknown function (DUF2786) 8 44 2.0E-11 T 29-03-2018 IPR024498 Domain of unknown function DUF2786 AM460_RS05325 d3561f3bff04483f682a43def23d43cc 466 Pfam PF13347 MFS/sugar transport protein 27 448 1.5E-81 T 29-03-2018 AM460_RS05325 d3561f3bff04483f682a43def23d43cc 466 Gene3D G3DSA:1.20.1250.20 229 446 3.9E-8 T 29-03-2018 AM460_RS05325 d3561f3bff04483f682a43def23d43cc 466 SUPERFAMILY SSF103473 29 406 1.83E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS05325 d3561f3bff04483f682a43def23d43cc 466 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 25 462 3.9E-100 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM460_RS05325 d3561f3bff04483f682a43def23d43cc 466 Gene3D G3DSA:1.20.1250.20 26 228 1.9E-17 T 29-03-2018 AM460_RS18650 632145d63ad24c9fc3bea2476a92366f 273 Gene3D G3DSA:2.10.230.10 186 224 0.051 T 29-03-2018 AM460_RS18650 632145d63ad24c9fc3bea2476a92366f 273 Gene3D G3DSA:2.10.230.10 104 185 5.1E-10 T 29-03-2018 AM460_RS18650 632145d63ad24c9fc3bea2476a92366f 273 Pfam PF03589 Antitermination protein 24 111 1.1E-25 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM460_RS18650 632145d63ad24c9fc3bea2476a92366f 273 Pfam PF03589 Antitermination protein 178 265 2.8E-22 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM460_RS18650 632145d63ad24c9fc3bea2476a92366f 273 SUPERFAMILY SSF57938 169 220 7.32E-7 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM460_RS23955 7239087e5d36b9bbcc76092ec02d9aa8 406 Gene3D G3DSA:1.20.1250.20 208 406 7.2E-26 T 29-03-2018 AM460_RS23955 7239087e5d36b9bbcc76092ec02d9aa8 406 Gene3D G3DSA:1.20.1250.20 17 207 1.2E-20 T 29-03-2018 AM460_RS23955 7239087e5d36b9bbcc76092ec02d9aa8 406 Pfam PF07690 Major Facilitator Superfamily 31 264 9.7E-25 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS23955 7239087e5d36b9bbcc76092ec02d9aa8 406 SUPERFAMILY SSF103473 20 401 2.49E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 146 173 1.8E-7 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 58 78 1.8E-7 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 21 247 1.3E-84 T 29-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 20 248 57.557 T 29-03-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 Gene3D G3DSA:1.10.8.60 182 248 1.4E-14 T 29-03-2018 AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 Gene3D G3DSA:3.40.50.300 28 179 6.9E-10 T 29-03-2018 AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 Pfam PF00308 Bacterial dnaA protein 31 227 1.6E-16 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AM460_RS11950 4c7f0457fb24b05f357b7c0347237f04 248 SUPERFAMILY SSF52540 33 226 8.05E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02070 2a0aa537b76cdffcf3f95666d621742b 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 2.8E-145 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM460_RS02070 2a0aa537b76cdffcf3f95666d621742b 433 PIRSF PIRSF004539 1 433 2.4E-181 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM460_RS02070 2a0aa537b76cdffcf3f95666d621742b 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.2E-210 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 SUPERFAMILY SSF47823 4 100 8.04E-36 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 6.3E-120 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 58.806 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 Pfam PF00589 Phage integrase family 113 284 2.7E-56 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 SUPERFAMILY SSF56349 106 296 5.0E-60 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 Gene3D G3DSA:1.10.150.130 3 100 6.5E-20 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 4.8E-25 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 66.874 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM460_RS09710 a1b221e930a1b909bc57d6057389959d 298 Gene3D G3DSA:1.10.443.10 111 292 5.6E-51 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.307 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 Pfam PF01256 Carbohydrate kinase 258 496 4.6E-81 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 17 220 7.6E-72 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 SUPERFAMILY SSF53613 233 498 4.04E-75 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 Gene3D G3DSA:3.40.50.10260 2 234 2.2E-64 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 29-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 23.396 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 PIRSF PIRSF017184 15 506 9.3E-176 T 29-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 Gene3D G3DSA:3.40.1190.20 235 500 5.9E-49 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 Pfam PF03853 YjeF-related protein N-terminus 40 199 3.6E-44 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 SUPERFAMILY SSF64153 17 256 4.71E-64 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 499 3.3E-98 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM460_RS01915 d86774c65d548d4e5fba035adeb501fe 515 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 323 333 - T 29-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AM460_RS01425 c1ce4550f2fd26228902b5e45090e656 138 Pfam PF06877 Regulator of ribonuclease activity B 12 113 2.2E-34 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM460_RS01425 c1ce4550f2fd26228902b5e45090e656 138 SUPERFAMILY SSF89946 2 122 7.45E-43 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM460_RS01425 c1ce4550f2fd26228902b5e45090e656 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.689 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B AM460_RS01425 c1ce4550f2fd26228902b5e45090e656 138 Gene3D G3DSA:3.30.70.970 3 116 2.4E-42 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM460_RS01425 c1ce4550f2fd26228902b5e45090e656 138 PIRSF PIRSF018193 1 138 1.7E-67 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B AM460_RS25815 58b3a5448b992f1bc46a6a0fc703d6c0 94 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 91 3.0E-43 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25815 58b3a5448b992f1bc46a6a0fc703d6c0 94 SUPERFAMILY SSF47345 2 92 4.97E-33 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25815 58b3a5448b992f1bc46a6a0fc703d6c0 94 Gene3D G3DSA:1.10.1200.20 1 92 4.3E-30 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25815 58b3a5448b992f1bc46a6a0fc703d6c0 94 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 2 91 1.3E-29 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25815 58b3a5448b992f1bc46a6a0fc703d6c0 94 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 6.0E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25815 58b3a5448b992f1bc46a6a0fc703d6c0 94 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 70 91 6.0E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS24440 2990862072e39b1733ed4503093023ad 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.325 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 AM460_RS24440 2990862072e39b1733ed4503093023ad 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 143 5.0E-49 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 AM460_RS04680 344f447b7988c3072dc40e0fc1b81a54 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.951 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM460_RS04680 344f447b7988c3072dc40e0fc1b81a54 119 SUPERFAMILY SSF54211 5 115 2.48E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS04680 344f447b7988c3072dc40e0fc1b81a54 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 29-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AM460_RS04680 344f447b7988c3072dc40e0fc1b81a54 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 105 3.0E-45 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM460_RS04680 344f447b7988c3072dc40e0fc1b81a54 119 Pfam PF00825 Ribonuclease P 6 111 1.8E-32 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM460_RS04680 344f447b7988c3072dc40e0fc1b81a54 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 7.5E-38 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM460_RS04680 344f447b7988c3072dc40e0fc1b81a54 119 Gene3D G3DSA:3.30.230.10 1 119 3.7E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS16535 3f276f43ce067a6bdeeb531cfb058310 429 Gene3D G3DSA:3.50.50.60 1 364 3.5E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS16535 3f276f43ce067a6bdeeb531cfb058310 429 SUPERFAMILY SSF51905 2 179 4.22E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS16535 3f276f43ce067a6bdeeb531cfb058310 429 SUPERFAMILY SSF51905 283 392 4.22E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS16535 3f276f43ce067a6bdeeb531cfb058310 429 Pfam PF01494 FAD binding domain 6 188 3.8E-13 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM460_RS16535 3f276f43ce067a6bdeeb531cfb058310 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 5.9E-6 T 29-03-2018 AM460_RS16535 3f276f43ce067a6bdeeb531cfb058310 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 5.9E-6 T 29-03-2018 AM460_RS16535 3f276f43ce067a6bdeeb531cfb058310 429 SUPERFAMILY SSF54373 180 283 1.57E-24 T 29-03-2018 AM460_RS10565 17354aaf91792a8793675122d78a42f6 454 PIRSF PIRSF002746 1 454 3.1E-152 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS10565 17354aaf91792a8793675122d78a42f6 454 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 454 8.4E-104 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS10565 17354aaf91792a8793675122d78a42f6 454 Pfam PF02447 GntP family permease 5 451 1.3E-155 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS02175 77df78ce0c27cd131c7c13ef5c1a5ded 845 SUPERFAMILY SSF141729 36 156 9.42E-23 T 29-03-2018 AM460_RS02175 77df78ce0c27cd131c7c13ef5c1a5ded 845 Pfam PF13954 PapC N-terminal domain 37 182 3.5E-34 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS02175 77df78ce0c27cd131c7c13ef5c1a5ded 845 Pfam PF13953 PapC C-terminal domain 766 831 2.3E-21 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS02175 77df78ce0c27cd131c7c13ef5c1a5ded 845 Pfam PF00577 Outer membrane usher protein 197 756 2.6E-161 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS15410 12f4e773fdfcc212e304357f33834f43 546 Gene3D G3DSA:1.20.1170.10 19 281 2.3E-5 T 29-03-2018 AM460_RS05810 fde4df801c9080e508a33099a04bfa66 164 PIRSF PIRSF030840 1 162 2.8E-84 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like AM460_RS05810 fde4df801c9080e508a33099a04bfa66 164 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 6 156 4.7E-63 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like AM460_RS05810 fde4df801c9080e508a33099a04bfa66 164 Gene3D G3DSA:3.40.1570.10 3 164 5.8E-35 T 29-03-2018 AM460_RS05810 fde4df801c9080e508a33099a04bfa66 164 Pfam PF06228 Haem utilisation ChuX/HutX 22 156 8.5E-31 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like AM460_RS05810 fde4df801c9080e508a33099a04bfa66 164 SUPERFAMILY SSF144064 6 159 7.32E-46 T 29-03-2018 AM460_RS23545 e5704c505cde9a2250532866f3724f28 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS23545 e5704c505cde9a2250532866f3724f28 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 2.0E-20 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS23545 e5704c505cde9a2250532866f3724f28 50 Pfam PF01848 Hok/gef family 5 46 4.2E-17 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS23545 e5704c505cde9a2250532866f3724f28 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 3.0E-11 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS23545 e5704c505cde9a2250532866f3724f28 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 3.0E-11 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS22460 36746094b1de5e999ec9c5306e70df5c 427 SUPERFAMILY SSF51126 407 420 4.49E-37 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS22460 36746094b1de5e999ec9c5306e70df5c 427 SUPERFAMILY SSF51126 75 155 4.49E-37 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS22460 36746094b1de5e999ec9c5306e70df5c 427 SUPERFAMILY SSF51126 192 376 4.49E-37 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS22460 36746094b1de5e999ec9c5306e70df5c 427 Gene3D G3DSA:2.160.20.10 74 427 1.6E-49 T 29-03-2018 IPR012334 Pectin lyase fold AM460_RS22460 36746094b1de5e999ec9c5306e70df5c 427 ProSitePatterns PS00503 Pectinesterase signature 2. 280 289 - T 29-03-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AM460_RS22460 36746094b1de5e999ec9c5306e70df5c 427 Pfam PF01095 Pectinesterase 194 339 4.3E-11 T 29-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AM460_RS05150 b97b5b23e039d433080a01450a0c0bb0 348 Gene3D G3DSA:3.40.50.2000 163 348 3.5E-45 T 29-03-2018 AM460_RS05150 b97b5b23e039d433080a01450a0c0bb0 348 Gene3D G3DSA:3.40.50.2000 1 152 6.0E-34 T 29-03-2018 AM460_RS05150 b97b5b23e039d433080a01450a0c0bb0 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 2.9E-91 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM460_RS05150 b97b5b23e039d433080a01450a0c0bb0 348 SUPERFAMILY SSF53756 1 343 6.28E-102 T 29-03-2018 AM460_RS05150 b97b5b23e039d433080a01450a0c0bb0 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 9.7E-172 T 29-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AM460_RS27850 ca910758b542966dfa2844dcd3ad0a9d 263 Pfam PF10670 Domain of unknown function (DUF4198) 20 239 2.3E-24 T 29-03-2018 IPR019613 Protein of unknown function DUF4198 AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 Gene3D G3DSA:3.40.50.720 2 262 3.1E-52 T 29-03-2018 AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 259 1.9E-43 T 29-03-2018 AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 SUPERFAMILY SSF51735 5 261 2.89E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.9E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.9E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.9E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS01675 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.9E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18190 bcc9307daa5369a2780b2b4d52ab9316 262 Gene3D G3DSA:3.40.50.720 3 261 5.2E-43 T 29-03-2018 AM460_RS18190 bcc9307daa5369a2780b2b4d52ab9316 262 PIRSF PIRSF000094 1 260 4.5E-125 T 29-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM460_RS18190 bcc9307daa5369a2780b2b4d52ab9316 262 SUPERFAMILY SSF51735 6 253 3.72E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18190 bcc9307daa5369a2780b2b4d52ab9316 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 8.3E-85 T 29-03-2018 AM460_RS18190 bcc9307daa5369a2780b2b4d52ab9316 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18190 bcc9307daa5369a2780b2b4d52ab9316 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.0E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18190 bcc9307daa5369a2780b2b4d52ab9316 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.0E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS18835 fb1b9639248c5e7e67eb5002d66c86e0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.4E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18835 fb1b9639248c5e7e67eb5002d66c86e0 306 SUPERFAMILY SSF161098 89 291 2.62E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18835 fb1b9639248c5e7e67eb5002d66c86e0 306 Gene3D G3DSA:1.10.3720.10 2 294 8.2E-41 T 29-03-2018 AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 SUPERFAMILY SSF51182 11 215 1.09E-15 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:1.10.10.60 215 271 9.1E-10 T 29-03-2018 AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 SUPERFAMILY SSF46689 215 261 6.81E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 SMART SM00342 174 256 1.0E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:1.10.10.60 161 214 2.3E-10 T 29-03-2018 AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 Pfam PF02311 AraC-like ligand binding domain 27 80 2.8E-7 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:2.60.120.10 3 160 8.0E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS17945 ad0c7bcb30f33dda8df400ed8ed1b668 271 Pfam PF12833 Helix-turn-helix domain 180 258 1.9E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS26380 a590bd9530bb308ee4076d5e5252f963 89 Gene3D G3DSA:1.10.1220.10 2 48 6.5E-7 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS14975 2fad9504b2434c668ff57c0847dd5445 265 SUPERFAMILY SSF46689 213 262 2.56E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS14975 2fad9504b2434c668ff57c0847dd5445 265 Pfam PF12833 Helix-turn-helix domain 184 261 7.6E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS14975 2fad9504b2434c668ff57c0847dd5445 265 Gene3D G3DSA:1.10.10.60 205 265 2.2E-8 T 29-03-2018 AM460_RS14975 2fad9504b2434c668ff57c0847dd5445 265 SMART SM00342 178 260 1.3E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS14975 2fad9504b2434c668ff57c0847dd5445 265 Gene3D G3DSA:1.10.10.60 155 204 8.1E-4 T 29-03-2018 AM460_RS17595 a487ce5055c284151d1d1d534cebab3c 353 Gene3D G3DSA:2.130.10.10 31 353 2.1E-53 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM460_RS17595 a487ce5055c284151d1d1d534cebab3c 353 SUPERFAMILY SSF51004 37 337 1.7E-40 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM460_RS24195 a3aebedd25ddedfe1ade83d1e8475627 105 SUPERFAMILY SSF82657 1 89 7.85E-31 T 29-03-2018 IPR002634 BolA protein AM460_RS24195 a3aebedd25ddedfe1ade83d1e8475627 105 Pfam PF01722 BolA-like protein 11 84 7.0E-29 T 29-03-2018 IPR002634 BolA protein AM460_RS24195 a3aebedd25ddedfe1ade83d1e8475627 105 PIRSF PIRSF003113 1 100 1.2E-33 T 29-03-2018 IPR002634 BolA protein AM460_RS24195 a3aebedd25ddedfe1ade83d1e8475627 105 Gene3D G3DSA:3.30.300.90 1 91 4.7E-28 T 29-03-2018 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 Pfam PF06445 GyrI-like small molecule binding domain 138 294 2.2E-11 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 SMART SM00871 137 294 6.2E-10 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 Gene3D G3DSA:1.10.10.60 69 127 4.9E-13 T 29-03-2018 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 Gene3D G3DSA:1.10.10.60 9 68 2.7E-12 T 29-03-2018 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 SUPERFAMILY SSF46689 16 66 5.56E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 SUPERFAMILY SSF46689 68 121 7.17E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 SMART SM00342 32 115 9.6E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 SUPERFAMILY SSF55136 138 294 6.8E-36 T 29-03-2018 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 99 115 1.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 84 99 1.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 Gene3D G3DSA:3.20.80.10 128 294 2.5E-12 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AM460_RS24870 6981ac59b2230e3f9e538cd9dd53a096 296 Pfam PF12833 Helix-turn-helix domain 38 117 3.2E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS23410 e9b407cd402ef39d77772a144291a64a 137 SUPERFAMILY SSF54637 1 136 2.86E-31 T 29-03-2018 IPR029069 HotDog domain AM460_RS23410 e9b407cd402ef39d77772a144291a64a 137 Pfam PF03061 Thioesterase superfamily 50 127 6.6E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM460_RS23410 e9b407cd402ef39d77772a144291a64a 137 Gene3D G3DSA:3.10.129.10 1 136 7.9E-28 T 29-03-2018 AM460_RS23410 e9b407cd402ef39d77772a144291a64a 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 53.774 T 29-03-2018 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 AM460_RS23410 e9b407cd402ef39d77772a144291a64a 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 1.3E-47 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM460_RS13320 c2016f296eb42227d9dfe25bc81b90e6 149 SUPERFAMILY SSF48695 48 145 2.26E-40 T 29-03-2018 IPR011031 Multihaem cytochrome AM460_RS13320 c2016f296eb42227d9dfe25bc81b90e6 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 142 1.8E-43 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AM460_RS13320 c2016f296eb42227d9dfe25bc81b90e6 149 Gene3D G3DSA:1.10.1130.10 62 128 2.0E-29 T 29-03-2018 AM460_RS13320 c2016f296eb42227d9dfe25bc81b90e6 149 PIRSF PIRSF006105 3 149 3.9E-54 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AM460_RS00055 2c1d4421ac9f882f8ab79287db34100d 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AM460_RS00055 2c1d4421ac9f882f8ab79287db34100d 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 177 2.6E-41 T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AM460_RS26370 37763c2541b3fa2280bc5711b2fe086d 402 Pfam PF14319 Transposase zinc-binding domain 21 124 2.6E-28 T 29-03-2018 IPR026889 Transposase zinc-binding domain AM460_RS26370 37763c2541b3fa2280bc5711b2fe086d 402 Pfam PF04986 Putative transposase 147 325 4.3E-51 T 29-03-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 AM460_RS26355 37763c2541b3fa2280bc5711b2fe086d 402 Pfam PF14319 Transposase zinc-binding domain 21 124 2.6E-28 T 29-03-2018 IPR026889 Transposase zinc-binding domain AM460_RS26355 37763c2541b3fa2280bc5711b2fe086d 402 Pfam PF04986 Putative transposase 147 325 4.3E-51 T 29-03-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 AM460_RS03040 5146d0aa22bbef4a00024409d1be99e1 231 PIRSF PIRSF006993 1 231 7.0E-117 T 29-03-2018 IPR016500 Uncharacterised conserved protein UCP006993 AM460_RS03040 5146d0aa22bbef4a00024409d1be99e1 231 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 1.0E-8 T 29-03-2018 IPR012640 Membrane lipoprotein, lipid attachment site AM460_RS03040 5146d0aa22bbef4a00024409d1be99e1 231 Pfam PF07356 Protein of unknown function (DUF1481) 42 227 2.9E-69 T 29-03-2018 IPR010858 Protein of unknown function DUF1481 AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 SMART SM00487 20 223 9.1E-64 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 449 52.385 T 29-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 Gene3D G3DSA:3.40.50.300 224 453 4.0E-48 T 29-03-2018 AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 Pfam PF00270 DEAD/DEAH box helicase 25 196 4.0E-51 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 Pfam PF00271 Helicase conserved C-terminal domain 240 339 2.7E-26 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 SMART SM00490 259 340 7.6E-32 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 SUPERFAMILY SSF52540 75 361 4.7E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22335 1a321fec30d7241dace1bfc0e9a1b2d9 453 Gene3D G3DSA:3.40.50.300 7 223 1.9E-61 T 29-03-2018 AM460_RS20440 3c7e3d9c7909eb7ae7c8658a097fa98d 441 SUPERFAMILY SSF53448 61 338 3.0E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS20440 3c7e3d9c7909eb7ae7c8658a097fa98d 441 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 437 1.0E-194 T 29-03-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 AM460_RS20440 3c7e3d9c7909eb7ae7c8658a097fa98d 441 Gene3D G3DSA:3.90.550.10 53 331 2.8E-60 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS20440 3c7e3d9c7909eb7ae7c8658a097fa98d 441 Pfam PF00535 Glycosyl transferase family 2 78 245 1.4E-38 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS14560 664b2bcd4126fcd4e977ccad283881ba 407 Gene3D G3DSA:3.40.50.620 11 235 2.7E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS14560 664b2bcd4126fcd4e977ccad283881ba 407 SUPERFAMILY SSF52402 12 234 5.33E-40 T 29-03-2018 AM460_RS14560 664b2bcd4126fcd4e977ccad283881ba 407 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 32 84 1.7E-6 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM460_RS14560 664b2bcd4126fcd4e977ccad283881ba 407 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 162 237 2.2E-7 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM460_RS14560 664b2bcd4126fcd4e977ccad283881ba 407 Pfam PF11922 Domain of unknown function (DUF3440) 356 387 1.0E-7 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 AM460_RS14560 664b2bcd4126fcd4e977ccad283881ba 407 Pfam PF11922 Domain of unknown function (DUF3440) 239 342 2.6E-28 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 SUPERFAMILY SSF56784 4 212 2.67E-45 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 183 7.6E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 1.5E-22 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 3.0E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.0E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.0E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 Gene3D G3DSA:1.10.150.240 19 76 6.8E-15 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM460_RS04620 ec4a382c9a78802e8c350df87efdd092 221 Gene3D G3DSA:3.40.50.1000 77 216 1.7E-19 T 29-03-2018 IPR023214 HAD-like domain AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 Gene3D G3DSA:3.30.1050.10 532 660 1.2E-22 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 SUPERFAMILY SSF55718 541 660 8.01E-30 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 Pfam PF14864 Alkyl sulfatase C-terminal 539 660 2.1E-33 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 SUPERFAMILY SSF56281 33 533 2.1E-149 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 Gene3D G3DSA:3.60.15.10 96 396 1.7E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 SMART SM00849 133 355 1.1E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 Pfam PF14863 Alkyl sulfatase dimerisation 392 530 5.7E-55 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AM460_RS02425 c7c8d500eed050b8328f30af21e49593 661 Pfam PF00753 Metallo-beta-lactamase superfamily 129 355 5.4E-50 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS08035 29c05b8702cd93fa00920db899d0db99 104 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 92 1.6E-21 T 29-03-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 AM460_RS18560 1828be1c2a882c76276ca176f4afbf95 66 Pfam PF13132 Domain of unknown function (DUF3950) 22 50 4.9E-18 T 29-03-2018 IPR025030 Domain of unknown function DUF3950 AM460_RS12405 013f3768af577a6c6778d10efae3e393 345 SUPERFAMILY SSF101821 67 166 1.07E-19 T 29-03-2018 AM460_RS12405 013f3768af577a6c6778d10efae3e393 345 Pfam PF05343 M42 glutamyl aminopeptidase 43 325 2.8E-84 T 29-03-2018 IPR008007 Peptidase M42 AM460_RS12405 013f3768af577a6c6778d10efae3e393 345 SUPERFAMILY SSF53187 3 77 5.03E-63 T 29-03-2018 AM460_RS12405 013f3768af577a6c6778d10efae3e393 345 SUPERFAMILY SSF53187 158 340 5.03E-63 T 29-03-2018 AM460_RS12405 013f3768af577a6c6778d10efae3e393 345 PIRSF PIRSF001123 1 344 1.7E-119 T 29-03-2018 IPR008007 Peptidase M42 AM460_RS12405 013f3768af577a6c6778d10efae3e393 345 Gene3D G3DSA:3.40.630.10 147 343 6.0E-35 T 29-03-2018 AM460_RS12405 013f3768af577a6c6778d10efae3e393 345 Gene3D G3DSA:2.40.30.40 67 146 5.5E-16 T 29-03-2018 IPR023367 Peptidase M42, domain 2 AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 PRINTS PR00969 Pili chaperone signature 81 102 2.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 PRINTS PR00969 Pili chaperone signature 171 186 2.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 PRINTS PR00969 Pili chaperone signature 136 151 2.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 PRINTS PR00969 Pili chaperone signature 110 127 2.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 PRINTS PR00969 Pili chaperone signature 36 45 2.0E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 SUPERFAMILY SSF49354 36 154 5.49E-40 T 29-03-2018 IPR008962 PapD-like AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 Gene3D G3DSA:2.60.40.10 156 239 4.5E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 Gene3D G3DSA:2.60.40.10 36 152 6.0E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 178 231 2.3E-11 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 SUPERFAMILY SSF49584 149 234 7.85E-21 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM460_RS17385 c7a4d22e4e849bf7cb6ddd8a61a4d5c3 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 154 1.3E-39 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM460_RS01820 dcf3153530509979bafc0eb2b087f48d 212 Pfam PF06693 Protein of unknown function (DUF1190) 67 211 1.2E-19 T 29-03-2018 IPR009576 Biofilm formation YgiB AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 SMART SM00345 16 75 7.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 5.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 Gene3D G3DSA:1.10.10.10 1 74 3.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 6.9E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 6.9E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 Pfam PF07702 UTRA domain 98 236 9.0E-26 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 SMART SM00866 97 237 2.0E-24 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 SUPERFAMILY SSF46785 6 79 3.98E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 SUPERFAMILY SSF64288 63 244 1.73E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS05990 6d79f84e03a0ea5322ab6ab02f7b02bf 248 Gene3D G3DSA:3.40.1410.10 75 245 1.7E-31 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM460_RS25860 87596e5d9af47d3ab15c326ece379f7b 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM460_RS25860 87596e5d9af47d3ab15c326ece379f7b 400 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 5.9E-29 T 29-03-2018 IPR018076 Type II secretion system F domain AM460_RS25860 87596e5d9af47d3ab15c326ece379f7b 400 Pfam PF00482 Type II secretion system (T2SS), protein F 270 388 5.9E-24 T 29-03-2018 IPR018076 Type II secretion system F domain AM460_RS25860 87596e5d9af47d3ab15c326ece379f7b 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 2.6E-14 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS25860 87596e5d9af47d3ab15c326ece379f7b 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 2.6E-14 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS25860 87596e5d9af47d3ab15c326ece379f7b 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 2.6E-14 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS25860 87596e5d9af47d3ab15c326ece379f7b 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 2.6E-14 T 29-03-2018 IPR003004 GspF/PilC family AM460_RS12640 1c054bcc555c42390055e6ab1a0b39f8 161 Gene3D G3DSA:3.40.50.1240 1 161 6.0E-21 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS12640 1c054bcc555c42390055e6ab1a0b39f8 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 71 1.6E-7 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS12640 1c054bcc555c42390055e6ab1a0b39f8 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 7.7E-65 T 29-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 AM460_RS12640 1c054bcc555c42390055e6ab1a0b39f8 161 SUPERFAMILY SSF53254 1 143 1.76E-18 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS01310 d7a145fe3eeceeac339247c6f2332585 414 Gene3D G3DSA:1.20.1250.20 213 413 5.9E-26 T 29-03-2018 AM460_RS01310 d7a145fe3eeceeac339247c6f2332585 414 Pfam PF07690 Major Facilitator Superfamily 16 374 1.7E-55 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS01310 d7a145fe3eeceeac339247c6f2332585 414 SUPERFAMILY SSF103473 5 411 1.83E-83 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS01310 d7a145fe3eeceeac339247c6f2332585 414 Gene3D G3DSA:1.20.1250.20 3 202 2.4E-41 T 29-03-2018 AM460_RS06550 32740e207f143d0dcb334ca86f48b31d 361 Gene3D G3DSA:3.40.640.10 6 242 2.1E-28 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS06550 32740e207f143d0dcb334ca86f48b31d 361 Pfam PF00155 Aminotransferase class I and II 54 232 2.0E-8 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS06550 32740e207f143d0dcb334ca86f48b31d 361 SUPERFAMILY SSF53383 38 343 1.48E-29 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS23810 298568cf1083f43216823ad3cd292700 308 Gene3D G3DSA:3.40.190.10 95 184 1.5E-6 T 29-03-2018 AM460_RS23810 298568cf1083f43216823ad3cd292700 308 Gene3D G3DSA:1.10.10.10 2 94 1.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS23810 298568cf1083f43216823ad3cd292700 308 Pfam PF03466 LysR substrate binding domain 91 290 1.5E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS23810 298568cf1083f43216823ad3cd292700 308 Gene3D G3DSA:3.40.190.10 185 264 1.9E-9 T 29-03-2018 AM460_RS23810 298568cf1083f43216823ad3cd292700 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.4E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS23810 298568cf1083f43216823ad3cd292700 308 SUPERFAMILY SSF53850 105 292 3.26E-21 T 29-03-2018 AM460_RS23810 298568cf1083f43216823ad3cd292700 308 SUPERFAMILY SSF46785 3 88 1.09E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05555 5564ce4abd1598e41a94c30ac6f888ed 339 SUPERFAMILY SSF161098 89 160 1.49E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS05555 5564ce4abd1598e41a94c30ac6f888ed 339 SUPERFAMILY SSF161098 200 322 1.49E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS05555 5564ce4abd1598e41a94c30ac6f888ed 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 2.2E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS05555 5564ce4abd1598e41a94c30ac6f888ed 339 Gene3D G3DSA:1.10.3720.10 3 325 3.9E-47 T 29-03-2018 AM460_RS23580 b10b042d2ea4f1fba9ed5e66554ba1f3 217 Gene3D G3DSA:3.40.109.10 1 217 2.5E-39 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS23580 b10b042d2ea4f1fba9ed5e66554ba1f3 217 Pfam PF00881 Nitroreductase family 8 193 6.4E-35 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM460_RS23580 b10b042d2ea4f1fba9ed5e66554ba1f3 217 SUPERFAMILY SSF55469 1 216 2.75E-64 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS14905 716955ca26e4db07621099402452816d 121 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 25 93 3.3E-23 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM460_RS14905 716955ca26e4db07621099402452816d 121 Pfam PF04347 Flagellar biosynthesis protein, FliO 37 116 1.8E-19 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM460_RS01560 60fd77b76fba061cc678c830f21a5169 318 Pfam PF13407 Periplasmic binding protein domain 26 274 8.7E-45 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS01560 60fd77b76fba061cc678c830f21a5169 318 SUPERFAMILY SSF53822 23 310 4.21E-72 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS01560 60fd77b76fba061cc678c830f21a5169 318 Gene3D G3DSA:3.40.50.2300 141 301 3.7E-31 T 29-03-2018 AM460_RS01560 60fd77b76fba061cc678c830f21a5169 318 Gene3D G3DSA:3.40.50.2300 22 140 2.0E-21 T 29-03-2018 AM460_RS16330 9fe9e7dc7d38213722999837f6e40370 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 1.3E-177 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM460_RS16330 9fe9e7dc7d38213722999837f6e40370 452 PIRSF PIRSF006351 1 448 6.2E-135 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM460_RS16330 9fe9e7dc7d38213722999837f6e40370 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 5.2E-47 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS16330 9fe9e7dc7d38213722999837f6e40370 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 1.3E-177 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM460_RS16610 fc74a0cc14b51abaaa306917f8e3ada6 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 2.5E-47 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM460_RS16610 fc74a0cc14b51abaaa306917f8e3ada6 136 Pfam PF03061 Thioesterase superfamily 50 127 1.2E-16 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM460_RS16610 fc74a0cc14b51abaaa306917f8e3ada6 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 48.703 T 29-03-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 AM460_RS16610 fc74a0cc14b51abaaa306917f8e3ada6 136 Gene3D G3DSA:3.10.129.10 1 136 4.3E-29 T 29-03-2018 AM460_RS16610 fc74a0cc14b51abaaa306917f8e3ada6 136 SUPERFAMILY SSF54637 1 133 1.52E-29 T 29-03-2018 IPR029069 HotDog domain AM460_RS05920 c2a2a507453813d4db15fd2112a4401d 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.999 T 29-03-2018 IPR019598 Universal stress protein B AM460_RS05920 c2a2a507453813d4db15fd2112a4401d 111 Pfam PF10625 Universal stress protein B (UspB) 1 107 1.4E-54 T 29-03-2018 IPR019598 Universal stress protein B AM460_RS23600 0e43fbd298f54d0e83ba53356c3740de 407 Pfam PF00529 HlyD membrane-fusion protein of T1SS 216 378 1.5E-9 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS23600 0e43fbd298f54d0e83ba53356c3740de 407 SUPERFAMILY SSF111369 118 318 9.81E-11 T 29-03-2018 AM460_RS23600 0e43fbd298f54d0e83ba53356c3740de 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 203 391 2.8E-30 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS23600 0e43fbd298f54d0e83ba53356c3740de 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 313 1.6E-58 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS23600 0e43fbd298f54d0e83ba53356c3740de 407 Gene3D G3DSA:2.40.50.100 114 239 1.7E-9 T 29-03-2018 AM460_RS22960 14f2fe605630eb043511cc5563860356 411 Pfam PF07005 Putative sugar-binding N-terminal domain 10 220 5.2E-51 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM460_RS22960 14f2fe605630eb043511cc5563860356 411 SUPERFAMILY SSF142764 10 405 1.18E-90 T 29-03-2018 AM460_RS22960 14f2fe605630eb043511cc5563860356 411 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 234 398 1.6E-31 T 29-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AM460_RS22960 14f2fe605630eb043511cc5563860356 411 Gene3D G3DSA:3.40.50.10840 9 227 1.3E-55 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM460_RS02845 a63086b42d500d9928b5856e51f0491d 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 691 7.9E-271 T 29-03-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH AM460_RS19070 3789c6aa94e829171ed62d836dd8c97b 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 188 4.5E-53 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM460_RS19070 3789c6aa94e829171ed62d836dd8c97b 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM460_RS19070 3789c6aa94e829171ed62d836dd8c97b 194 SUPERFAMILY SSF53178 3 192 3.27E-70 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM460_RS19070 3789c6aa94e829171ed62d836dd8c97b 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 35.918 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM460_RS19070 3789c6aa94e829171ed62d836dd8c97b 194 Gene3D G3DSA:3.40.50.1470 1 194 4.7E-69 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM460_RS19070 3789c6aa94e829171ed62d836dd8c97b 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 7.4E-74 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM460_RS19070 3789c6aa94e829171ed62d836dd8c97b 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 SUPERFAMILY SSF50249 1 66 8.57E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 PIRSF PIRSF002599 1 74 3.6E-23 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 Gene3D G3DSA:2.40.50.140 1 67 3.0E-26 T 29-03-2018 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 SMART SM00357 3 67 6.1E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 29-03-2018 IPR019844 Cold-shock conserved site AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.1E-43 T 29-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 AM460_RS21890 2af9790425e583c73e4c4e65cf6a70d1 74 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.6E-29 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 Pfam PF07729 FCD domain 96 219 2.5E-18 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 SUPERFAMILY SSF48008 94 222 9.94E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.2E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.2E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 SMART SM00345 13 72 9.2E-26 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 Gene3D G3DSA:1.20.120.530 80 229 9.9E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 SUPERFAMILY SSF46785 2 76 2.37E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 Gene3D G3DSA:1.10.10.10 1 74 2.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 SMART SM00895 96 220 9.1E-16 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS07975 753e682a32a9f28345a8bdc63d9c8479 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.6E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 Gene3D G3DSA:3.20.20.150 1 173 9.7E-66 T 29-03-2018 AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 Gene3D G3DSA:3.20.20.150 174 391 3.0E-47 T 29-03-2018 AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 1.1E-239 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.3E-167 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 PIRSF PIRSF016049 1 392 1.6E-184 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 SUPERFAMILY SSF51658 1 133 1.52E-79 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 SUPERFAMILY SSF51658 163 383 1.52E-79 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS00815 cd306fc3684b624f211e58583483d9a1 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 226.291 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 Pfam PF00005 ABC transporter 22 169 1.3E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 Pfam PF00005 ABC transporter 269 423 1.3E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 SUPERFAMILY SSF52540 249 483 7.81E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 Gene3D G3DSA:3.40.50.300 265 492 1.1E-41 T 29-03-2018 AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 Gene3D G3DSA:3.40.50.300 1 252 1.8E-49 T 29-03-2018 AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 SUPERFAMILY SSF52540 4 231 7.59E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 SMART SM00382 277 472 2.6E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS04445 7a9bf2b8a646f86f5bd138cdf1836e79 501 SMART SM00382 29 219 1.9E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22815 8091f23bb05e0512949998ebbdc6166b 244 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.255 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM460_RS22815 8091f23bb05e0512949998ebbdc6166b 244 Gene3D G3DSA:3.20.20.370 2 244 2.4E-97 T 29-03-2018 AM460_RS22815 8091f23bb05e0512949998ebbdc6166b 244 Pfam PF03746 LamB/YcsF family 3 235 9.3E-93 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM460_RS22815 8091f23bb05e0512949998ebbdc6166b 244 SUPERFAMILY SSF88713 1 242 3.48E-91 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS16965 ebdb890e6545d0f463c010dc7e0d5555 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.9E-110 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AM460_RS16965 ebdb890e6545d0f463c010dc7e0d5555 333 Gene3D G3DSA:3.20.20.140 2 333 2.8E-75 T 29-03-2018 AM460_RS16965 ebdb890e6545d0f463c010dc7e0d5555 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 55.012 T 29-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AM460_RS16965 ebdb890e6545d0f463c010dc7e0d5555 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 29-03-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 AM460_RS16965 ebdb890e6545d0f463c010dc7e0d5555 333 SUPERFAMILY SSF51556 5 326 3.71E-78 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS16965 ebdb890e6545d0f463c010dc7e0d5555 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.5E-108 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AM460_RS25870 a298a24b75c6cca43bd5aa7079e218e8 206 SUPERFAMILY SSF52540 1 190 3.79E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS25870 a298a24b75c6cca43bd5aa7079e218e8 206 Pfam PF01121 Dephospho-CoA kinase 3 177 1.5E-77 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM460_RS25870 a298a24b75c6cca43bd5aa7079e218e8 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.855 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM460_RS25870 a298a24b75c6cca43bd5aa7079e218e8 206 Gene3D G3DSA:3.40.50.300 1 206 2.4E-49 T 29-03-2018 AM460_RS25870 a298a24b75c6cca43bd5aa7079e218e8 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 1.5E-72 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM460_RS10535 0856dc608b1d4b7dbbc35dee969c97f8 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.359 T 29-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM460_RS10535 0856dc608b1d4b7dbbc35dee969c97f8 253 SUPERFAMILY SSF64167 1 246 3.4E-83 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM460_RS10535 0856dc608b1d4b7dbbc35dee969c97f8 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.3E-80 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM460_RS10535 0856dc608b1d4b7dbbc35dee969c97f8 253 Pfam PF01975 Survival protein SurE 3 180 2.2E-57 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM460_RS10535 0856dc608b1d4b7dbbc35dee969c97f8 253 Gene3D G3DSA:3.40.1210.10 1 247 2.0E-82 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 Gene3D G3DSA:3.40.190.10 26 154 8.2E-12 T 29-03-2018 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 Gene3D G3DSA:3.40.190.10 155 396 6.3E-42 T 29-03-2018 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 344 5.5E-42 T 29-03-2018 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 SUPERFAMILY SSF53850 29 395 1.28E-98 T 29-03-2018 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 357 376 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 130 149 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 233 252 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 70 88 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 299 320 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 151 170 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 171 190 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 PRINTS PR00181 Maltose binding protein signature 36 54 9.4E-101 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM460_RS02820 9358e1fd683b8f59f23d406eefbd0573 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AM460_RS23590 9be4418f572ab1374dee094f8217ad80 460 PIRSF PIRSF006060 4 458 1.2E-77 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS23590 9be4418f572ab1374dee094f8217ad80 460 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS23590 9be4418f572ab1374dee094f8217ad80 460 Pfam PF00324 Amino acid permease 27 452 7.8E-119 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 551 3.9E-236 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 PRINTS PR01009 Flagellar M-ring protein signature 263 281 9.3E-46 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 PRINTS PR01009 Flagellar M-ring protein signature 119 137 9.3E-46 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 PRINTS PR01009 Flagellar M-ring protein signature 151 165 9.3E-46 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 PRINTS PR01009 Flagellar M-ring protein signature 357 381 9.3E-46 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 PRINTS PR01009 Flagellar M-ring protein signature 194 212 9.3E-46 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 Gene3D G3DSA:3.30.70.1530 50 113 2.8E-9 T 29-03-2018 AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 Pfam PF08345 Flagellar M-ring protein C-terminal 250 429 4.1E-53 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 Pfam PF01514 Secretory protein of YscJ/FliF family 30 218 2.0E-74 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF AM460_RS14950 799cc2c68b1cc25e63da261f0df0cf86 552 PIRSF PIRSF004862 1 552 5.0E-187 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM460_RS26420 1522cb8d8e690bfa412732b1992fe8c7 177 Pfam PF02357 Transcription termination factor nusG 10 105 5.5E-6 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS26420 1522cb8d8e690bfa412732b1992fe8c7 177 SMART SM00738 8 112 1.3E-8 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS26420 1522cb8d8e690bfa412732b1992fe8c7 177 Gene3D G3DSA:3.30.70.940 2 112 3.3E-8 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS26420 1522cb8d8e690bfa412732b1992fe8c7 177 SUPERFAMILY SSF82679 8 112 6.54E-13 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM460_RS08320 1e5087778c85c4bd82c5db4cfe1124f6 223 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 223 36.617 T 29-03-2018 IPR009576 Biofilm formation YgiB AM460_RS08320 1e5087778c85c4bd82c5db4cfe1124f6 223 Pfam PF06693 Protein of unknown function (DUF1190) 41 210 3.0E-57 T 29-03-2018 IPR009576 Biofilm formation YgiB AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 TIGRFAM TIGR02649 true_RNase_BN: ribonuclease BN 2 304 4.8E-203 T 29-03-2018 IPR013469 Ribonuclease BN GO:0016891|GO:0042779 AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 SMART SM00849 18 212 0.0083 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 1.7E-104 T 29-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 Pfam PF12706 Beta-lactamase superfamily domain 36 154 1.4E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 Pfam PF12706 Beta-lactamase superfamily domain 203 270 1.2E-7 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 SUPERFAMILY SSF56281 1 304 4.72E-89 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 40.512 T 29-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AM460_RS12980 b1be432c9c5738b3c0afb0990a26ee65 305 Gene3D G3DSA:3.60.15.10 1 305 5.7E-63 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM460_RS11995 79de25710027b9941b278a537a881745 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 283 5.7E-143 T 29-03-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AM460_RS13915 df7d309e90b2cf2ff989da80784478ae 420 Hamap MF_01296 D-tagatose-1,6-bisphosphate aldolase subunit GatZ [gatZ]. 1 420 89.538 T 29-03-2018 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ GO:0019402 AM460_RS13915 df7d309e90b2cf2ff989da80784478ae 420 PIRSF PIRSF009264 1 420 3.6E-200 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM460_RS13915 df7d309e90b2cf2ff989da80784478ae 420 Gene3D G3DSA:3.20.20.70 1 289 2.7E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS13915 df7d309e90b2cf2ff989da80784478ae 420 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 3 418 4.3E-211 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM460_RS13915 df7d309e90b2cf2ff989da80784478ae 420 Gene3D G3DSA:1.10.400.20 290 403 2.5E-42 T 29-03-2018 AM460_RS13915 df7d309e90b2cf2ff989da80784478ae 420 Pfam PF08013 Tagatose 6 phosphate kinase 1 418 1.8E-191 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM460_RS13915 df7d309e90b2cf2ff989da80784478ae 420 SUPERFAMILY SSF51569 1 418 2.01E-167 T 29-03-2018 AM460_RS25225 1eb753b0d5670888fc7dcbb0a0441ec5 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 6.8E-100 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS25225 1eb753b0d5670888fc7dcbb0a0441ec5 243 Gene3D G3DSA:3.30.420.10 1 191 4.7E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS25225 1eb753b0d5670888fc7dcbb0a0441ec5 243 SUPERFAMILY SSF53098 7 184 1.48E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS25225 1eb753b0d5670888fc7dcbb0a0441ec5 243 SMART SM00479 7 184 1.9E-51 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS25225 1eb753b0d5670888fc7dcbb0a0441ec5 243 Pfam PF00929 Exonuclease 9 175 3.9E-42 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS25225 1eb753b0d5670888fc7dcbb0a0441ec5 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 3.3E-96 T 29-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS25735 e0e5e8822d7c301c52d28fa60b350cc7 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 175.192 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM460_RS25735 e0e5e8822d7c301c52d28fa60b350cc7 264 Gene3D G3DSA:3.60.90.10 32 189 1.3E-45 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM460_RS25735 e0e5e8822d7c301c52d28fa60b350cc7 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 2.3E-30 T 29-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM460_RS25735 e0e5e8822d7c301c52d28fa60b350cc7 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 1.6E-148 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM460_RS25735 e0e5e8822d7c301c52d28fa60b350cc7 264 SUPERFAMILY SSF56276 112 173 5.1E-23 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM460_RS25735 e0e5e8822d7c301c52d28fa60b350cc7 264 SUPERFAMILY SSF56276 41 84 5.1E-23 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM460_RS25735 e0e5e8822d7c301c52d28fa60b350cc7 264 PIRSF PIRSF001356 1 263 5.3E-156 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM460_RS09495 d35fb41afff7f0a3eed6a27041ea5a65 425 SUPERFAMILY SSF50129 3 188 5.35E-25 T 29-03-2018 IPR011032 GroES-like AM460_RS09495 d35fb41afff7f0a3eed6a27041ea5a65 425 Gene3D G3DSA:3.40.50.720 156 343 4.4E-18 T 29-03-2018 AM460_RS09495 d35fb41afff7f0a3eed6a27041ea5a65 425 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 97 6.6E-7 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS09495 d35fb41afff7f0a3eed6a27041ea5a65 425 Gene3D G3DSA:3.90.180.10 1 155 1.7E-19 T 29-03-2018 AM460_RS09495 d35fb41afff7f0a3eed6a27041ea5a65 425 SUPERFAMILY SSF51735 157 336 1.36E-19 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS09495 d35fb41afff7f0a3eed6a27041ea5a65 425 Pfam PF00107 Zinc-binding dehydrogenase 186 329 5.5E-19 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS25415 00a782218a942c1a99d326d5dc7f41eb 161 SUPERFAMILY SSF111384 20 160 6.41E-32 T 29-03-2018 IPR024930 Skp domain AM460_RS25415 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 10 86 1.0E-9 T 29-03-2018 AM460_RS25415 00a782218a942c1a99d326d5dc7f41eb 161 SMART SM00935 10 161 2.4E-39 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM460_RS25415 00a782218a942c1a99d326d5dc7f41eb 161 Pfam PF03938 Outer membrane protein (OmpH-like) 9 159 2.2E-29 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM460_RS25415 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 87 161 3.4E-13 T 29-03-2018 AM460_RS25415 00a782218a942c1a99d326d5dc7f41eb 161 PIRSF PIRSF002094 1 161 3.7E-52 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 1.4E-126 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 3.3E-99 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.3E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.3E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.3E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.3E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.3E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS12370 c2e754c9a91b75c862fef2772e28db8c 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 39.192 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS26235 517055c71c73f9e72d57cbc58fea5d16 196 Gene3D G3DSA:2.160.10.10 4 175 2.8E-37 T 29-03-2018 AM460_RS26235 517055c71c73f9e72d57cbc58fea5d16 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.2E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS26235 517055c71c73f9e72d57cbc58fea5d16 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 41 2.6E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS26235 517055c71c73f9e72d57cbc58fea5d16 196 Hamap MF_01525 Carnitine operon protein CaiE [caiE]. 1 196 65.845 T 29-03-2018 IPR023446 Carnitine operon protein CaiE AM460_RS26235 517055c71c73f9e72d57cbc58fea5d16 196 SUPERFAMILY SSF51161 3 166 2.77E-40 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS10165 632a6c729840881b5115eeeee9e9118b 221 Pfam PF09850 Type VI secretion system protein DotU 9 207 2.3E-47 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM460_RS10165 632a6c729840881b5115eeeee9e9118b 221 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 9 211 3.0E-52 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM460_RS10635 8661b27e6c644be13f4028a3476702ef 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 1.1E-34 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM460_RS10635 8661b27e6c644be13f4028a3476702ef 290 SUPERFAMILY SSF52540 88 286 1.59E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS10635 8661b27e6c644be13f4028a3476702ef 290 Gene3D G3DSA:3.40.50.300 104 260 5.7E-21 T 29-03-2018 AM460_RS10635 8661b27e6c644be13f4028a3476702ef 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 1.6E-100 T 29-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 AM460_RS10635 8661b27e6c644be13f4028a3476702ef 290 PIRSF PIRSF005624 70 290 6.3E-94 T 29-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AM460_RS19065 6a0f28f7a21cfc27f20df0b8b89ec6ec 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 2.5E-47 T 29-03-2018 IPR019698 Protein of unknown function DUF2583 AM460_RS07690 d28ed1555987eee3fe928db57f6fd045 147 Gene3D G3DSA:2.30.110.10 1 145 2.2E-11 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS07690 d28ed1555987eee3fe928db57f6fd045 147 SUPERFAMILY SSF50475 4 139 2.88E-13 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM460_RS07690 d28ed1555987eee3fe928db57f6fd045 147 PIRSF PIRSF009554 1 145 3.1E-62 T 29-03-2018 IPR011194 Uncharacterised protein family UPF0306 AM460_RS07690 d28ed1555987eee3fe928db57f6fd045 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 36.074 T 29-03-2018 IPR011194 Uncharacterised protein family UPF0306 AM460_RS05845 ba567efc37a122d5441c11d83799896e 176 SUPERFAMILY SSF46894 97 170 3.06E-10 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS05845 ba567efc37a122d5441c11d83799896e 176 Gene3D G3DSA:1.10.10.10 13 175 1.2E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05845 ba567efc37a122d5441c11d83799896e 176 Pfam PF00196 Bacterial regulatory proteins, luxR family 115 168 5.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS05845 ba567efc37a122d5441c11d83799896e 176 SMART SM00421 113 170 2.4E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS27005 b08427821527863cec5598a547ef6959 330 Pfam PF06834 TraU protein 28 329 2.0E-115 T 29-03-2018 IPR009649 TraU AM460_RS27840 215d296a366b4d68a30eabc4e955c9e5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 2.4E-72 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS27840 215d296a366b4d68a30eabc4e955c9e5 260 PIRSF PIRSF003073 2 258 5.4E-93 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS27840 215d296a366b4d68a30eabc4e955c9e5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS27840 215d296a366b4d68a30eabc4e955c9e5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM460_RS27840 215d296a366b4d68a30eabc4e955c9e5 260 SMART SM00382 102 236 8.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS27840 215d296a366b4d68a30eabc4e955c9e5 260 Gene3D G3DSA:3.40.50.300 49 239 1.9E-17 T 29-03-2018 AM460_RS27840 215d296a366b4d68a30eabc4e955c9e5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 Gene3D G3DSA:3.40.50.300 9 305 9.1E-68 T 29-03-2018 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 Gene3D G3DSA:3.40.50.300 310 599 1.5E-73 T 29-03-2018 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 SUPERFAMILY SSF52540 314 563 6.41E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 Pfam PF00005 ABC transporter 341 491 8.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 Pfam PF00005 ABC transporter 33 196 1.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 543 575 4.5E-8 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 280 1.0E-7 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 SUPERFAMILY SSF52540 12 268 5.9E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 SMART SM00382 41 246 4.5E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22170 5c9652a1a8261a237f350a9bf05eda3b 623 SMART SM00382 349 549 1.9E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11235 e6d55a2e473aad81e3bc7edfdeafb201 215 Pfam PF06805 Bacteriophage lambda tail assembly protein I 14 97 7.9E-28 T 29-03-2018 IPR010654 Bacteriophage lambda tail assembly I AM460_RS25260 0fb97767dde727e765973c52029669a1 304 Gene3D G3DSA:3.40.190.10 93 178 3.7E-17 T 29-03-2018 AM460_RS25260 0fb97767dde727e765973c52029669a1 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.6E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS25260 0fb97767dde727e765973c52029669a1 304 Gene3D G3DSA:1.10.10.10 2 85 9.5E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25260 0fb97767dde727e765973c52029669a1 304 SUPERFAMILY SSF46785 6 113 7.57E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25260 0fb97767dde727e765973c52029669a1 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS25260 0fb97767dde727e765973c52029669a1 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS25260 0fb97767dde727e765973c52029669a1 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS25260 0fb97767dde727e765973c52029669a1 304 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-44 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS25260 0fb97767dde727e765973c52029669a1 304 SUPERFAMILY SSF53850 90 296 1.19E-45 T 29-03-2018 AM460_RS25260 0fb97767dde727e765973c52029669a1 304 Gene3D G3DSA:3.40.190.10 179 262 2.3E-22 T 29-03-2018 AM460_RS27700 41a8de179a4938df328bf0d049914737 388 Gene3D G3DSA:1.10.1660.10 36 102 2.8E-5 T 29-03-2018 AM460_RS27700 41a8de179a4938df328bf0d049914737 388 Gene3D G3DSA:3.40.50.300 106 377 1.0E-35 T 29-03-2018 AM460_RS27700 41a8de179a4938df328bf0d049914737 388 SUPERFAMILY SSF52540 106 374 4.72E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27700 41a8de179a4938df328bf0d049914737 388 Pfam PF13614 AAA domain 108 286 1.0E-28 T 29-03-2018 IPR025669 AAA domain AM460_RS18795 ee7c5c3da6a6c1524cfddad9735288b9 98 Pfam PF03795 YCII-related domain 2 95 1.6E-29 T 29-03-2018 IPR005545 YCII-related AM460_RS18795 ee7c5c3da6a6c1524cfddad9735288b9 98 SUPERFAMILY SSF54909 2 98 3.58E-32 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS18795 ee7c5c3da6a6c1524cfddad9735288b9 98 Gene3D G3DSA:3.30.70.1060 1 98 1.1E-29 T 29-03-2018 AM460_RS04145 361a48ee9873e2216b08d9cc6b57f9e9 106 Gene3D G3DSA:3.30.920.10 1 106 1.2E-34 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS04145 361a48ee9873e2216b08d9cc6b57f9e9 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.262 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS04145 361a48ee9873e2216b08d9cc6b57f9e9 106 SUPERFAMILY SSF55387 1 105 1.29E-40 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS04145 361a48ee9873e2216b08d9cc6b57f9e9 106 SMART SM01219 1 106 1.7E-57 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS04145 361a48ee9873e2216b08d9cc6b57f9e9 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 29-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS04145 361a48ee9873e2216b08d9cc6b57f9e9 106 Pfam PF01491 Frataxin-like domain 1 102 2.4E-30 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS04145 361a48ee9873e2216b08d9cc6b57f9e9 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 4.7E-44 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS10670 29461e349d298b7bdfa6478109141d70 180 SUPERFAMILY SSF54862 18 116 7.11E-23 T 29-03-2018 AM460_RS10670 29461e349d298b7bdfa6478109141d70 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS10670 29461e349d298b7bdfa6478109141d70 180 Gene3D G3DSA:3.30.70.20 8 45 3.5E-7 T 29-03-2018 AM460_RS10670 29461e349d298b7bdfa6478109141d70 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS10670 29461e349d298b7bdfa6478109141d70 180 Gene3D G3DSA:3.30.70.20 46 81 7.9E-17 T 29-03-2018 AM460_RS10670 29461e349d298b7bdfa6478109141d70 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 7.1E-13 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS10670 29461e349d298b7bdfa6478109141d70 180 Gene3D G3DSA:3.30.70.20 82 174 3.4E-5 T 29-03-2018 AM460_RS23440 e86310dd0453ecc7f55e406029f53942 416 Pfam PF05977 Transmembrane secretion effector 16 405 4.9E-21 T 29-03-2018 IPR010290 Transmembrane secretion effector AM460_RS23440 e86310dd0453ecc7f55e406029f53942 416 SUPERFAMILY SSF103473 16 403 4.97E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS23440 e86310dd0453ecc7f55e406029f53942 416 Gene3D G3DSA:1.20.1250.20 211 414 2.8E-13 T 29-03-2018 AM460_RS23440 e86310dd0453ecc7f55e406029f53942 416 Hamap MF_01436 Enterobactin exporter EntS [entS]. 1 414 43.506 T 29-03-2018 IPR023722 Enterobactin exporter, EntS GO:0005886|GO:0042930|GO:0042931 AM460_RS23440 e86310dd0453ecc7f55e406029f53942 416 Gene3D G3DSA:1.20.1250.20 9 210 1.8E-23 T 29-03-2018 AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 SUPERFAMILY SSF51735 161 333 6.83E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.1E-224 T 29-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 6.4E-21 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 SUPERFAMILY SSF50129 1 185 3.5E-71 T 29-03-2018 IPR011032 GroES-like AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 SUPERFAMILY SSF50129 318 369 4.71E-12 T 29-03-2018 IPR011032 GroES-like AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 SMART SM00829 12 367 5.4E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 6.6E-27 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 Gene3D G3DSA:3.90.180.10 1 188 3.0E-59 T 29-03-2018 AM460_RS24555 dbaa6f89b460872200e97dc7cdb3cd10 369 Gene3D G3DSA:3.40.50.720 189 312 2.4E-23 T 29-03-2018 AM460_RS17010 ffa134784dcb53aff5d416fbc1951af5 502 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 1.1E-137 T 29-03-2018 IPR010352 Protein of unknown function DUF945 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.9E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.9E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.9E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.9E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.9E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.9E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 1.9E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 0.0 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 6.2E-123 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.5E-96 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13355 7b66d9b73068f855e2ee7ab644677fd6 647 Pfam PF01578 Cytochrome C assembly protein 89 296 7.2E-55 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM460_RS09365 3f925d3503cb24cc3d9ca43e60096aa8 378 Pfam PF04055 Radical SAM superfamily 11 177 1.6E-19 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS09365 3f925d3503cb24cc3d9ca43e60096aa8 378 Gene3D G3DSA:3.20.20.70 4 316 2.9E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS09365 3f925d3503cb24cc3d9ca43e60096aa8 378 SUPERFAMILY SSF102114 5 376 4.58E-108 T 29-03-2018 AM460_RS09365 3f925d3503cb24cc3d9ca43e60096aa8 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 4.4E-142 T 29-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM460_RS09365 3f925d3503cb24cc3d9ca43e60096aa8 378 SMART SM00729 6 223 7.8E-57 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS09365 3f925d3503cb24cc3d9ca43e60096aa8 378 Pfam PF06969 HemN C-terminal domain 304 364 2.7E-7 T 29-03-2018 IPR010723 HemN, C-terminal AM460_RS18245 e2428e0fabe85c619beeb2d4570ddc6e 102 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 3.1E-21 T 29-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AM460_RS18245 e2428e0fabe85c619beeb2d4570ddc6e 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.915 T 29-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AM460_RS14440 e66e369b00e9c85203a5720350b54f38 231 SUPERFAMILY SSF52540 71 221 1.68E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14440 e66e369b00e9c85203a5720350b54f38 231 Pfam PF01695 IstB-like ATP binding protein 57 180 1.3E-43 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM460_RS14440 e66e369b00e9c85203a5720350b54f38 231 Gene3D G3DSA:3.40.50.300 49 210 9.1E-15 T 29-03-2018 AM460_RS14440 e66e369b00e9c85203a5720350b54f38 231 PIRSF PIRSF003073 177 229 3.1E-11 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS14440 e66e369b00e9c85203a5720350b54f38 231 PIRSF PIRSF003073 2 184 7.5E-63 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM460_RS14440 e66e369b00e9c85203a5720350b54f38 231 SMART SM00382 102 210 1.1E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS11175 4e59a9f58b0fbb47adf93b0806138865 675 PRINTS PR00127 Clp protease catalytic subunit P signature 62 82 1.2E-8 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS11175 4e59a9f58b0fbb47adf93b0806138865 675 PRINTS PR00127 Clp protease catalytic subunit P signature 93 110 1.2E-8 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS11175 4e59a9f58b0fbb47adf93b0806138865 675 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 1.2E-8 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS11175 4e59a9f58b0fbb47adf93b0806138865 675 SUPERFAMILY SSF52096 17 198 1.18E-48 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS11175 4e59a9f58b0fbb47adf93b0806138865 675 Gene3D G3DSA:3.90.226.10 12 208 3.7E-29 T 29-03-2018 AM460_RS11175 4e59a9f58b0fbb47adf93b0806138865 675 Pfam PF00574 Clp protease 31 191 5.9E-37 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM460_RS11175 4e59a9f58b0fbb47adf93b0806138865 675 Pfam PF10124 Mu-like prophage major head subunit gpT 534 607 1.0E-4 T 29-03-2018 IPR018774 Bacteriophage Mu, GpT AM460_RS19355 3672d8a44e26d6daa5e105671eb6fac2 513 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 0.0 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM460_RS19355 3672d8a44e26d6daa5e105671eb6fac2 513 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 0.0 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM460_RS19355 3672d8a44e26d6daa5e105671eb6fac2 513 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 513 366.182 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM460_RS01520 3e21294ba2d2a82f8ec9e70ef8650a05 128 SUPERFAMILY SSF47175 23 128 1.96E-35 T 29-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AM460_RS01520 3e21294ba2d2a82f8ec9e70ef8650a05 128 Gene3D G3DSA:1.20.120.10 24 128 2.2E-22 T 29-03-2018 AM460_RS01520 3e21294ba2d2a82f8ec9e70ef8650a05 128 PIRSF PIRSF000029 1 128 6.9E-64 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AM460_RS01520 3e21294ba2d2a82f8ec9e70ef8650a05 128 Pfam PF07361 Cytochrome b562 24 128 5.8E-32 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AM460_RS13060 16a828a23722d414ba87eb81b7a61bb2 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 373 3.4E-137 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM460_RS13060 16a828a23722d414ba87eb81b7a61bb2 379 SUPERFAMILY SSF53383 4 376 2.39E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS13060 16a828a23722d414ba87eb81b7a61bb2 379 PIRSF PIRSF000390 1 379 5.9E-115 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM460_RS13060 16a828a23722d414ba87eb81b7a61bb2 379 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 69.617 T 29-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 AM460_RS13060 16a828a23722d414ba87eb81b7a61bb2 379 Gene3D G3DSA:3.90.1150.10 245 379 5.3E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS13060 16a828a23722d414ba87eb81b7a61bb2 379 Gene3D G3DSA:3.40.640.10 14 244 1.8E-49 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 Gene3D G3DSA:3.40.640.10 135 282 1.1E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 Pfam PF00155 Aminotransferase class I and II 40 380 2.5E-68 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 51.087 T 29-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 Gene3D G3DSA:3.90.1150.10 283 383 3.5E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 Gene3D G3DSA:3.90.1150.10 1 134 9.2E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 SUPERFAMILY SSF53383 3 380 3.76E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS22440 9c9aa25b01533d69ccd72475260c09f6 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 8.0E-149 T 29-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM460_RS21035 8a6f938b4d89ff8ef8a4d8242e166abe 388 SMART SM00382 143 300 0.0014 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS21035 8a6f938b4d89ff8ef8a4d8242e166abe 388 Gene3D G3DSA:1.10.260.40 2 67 0.0024 T 29-03-2018 AM460_RS21035 8a6f938b4d89ff8ef8a4d8242e166abe 388 Gene3D G3DSA:3.40.50.300 112 377 5.4E-10 T 29-03-2018 AM460_RS21035 8a6f938b4d89ff8ef8a4d8242e166abe 388 SUPERFAMILY SSF52540 128 341 1.86E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21035 8a6f938b4d89ff8ef8a4d8242e166abe 388 Pfam PF13401 AAA domain 142 284 7.5E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS03350 ee33b1f96fbb9fc32c120416e947a427 301 Pfam PF00892 EamA-like transporter family 152 289 6.7E-26 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS03350 ee33b1f96fbb9fc32c120416e947a427 301 Pfam PF00892 EamA-like transporter family 13 141 1.1E-22 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS03350 ee33b1f96fbb9fc32c120416e947a427 301 SUPERFAMILY SSF103481 189 292 1.7E-16 T 29-03-2018 AM460_RS03350 ee33b1f96fbb9fc32c120416e947a427 301 SUPERFAMILY SSF103481 44 144 3.53E-14 T 29-03-2018 AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 151 333 1.8E-40 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 150 166 1.2E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 309 322 1.2E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 263 277 1.2E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 Pfam PF00145 C-5 cytosine-specific DNA methylase 34 143 2.4E-15 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 Pfam PF00145 C-5 cytosine-specific DNA methylase 152 389 1.3E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 SUPERFAMILY SSF53335 151 375 2.8E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 SUPERFAMILY SSF53335 9 141 4.65E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 123 141 - T 29-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 Gene3D G3DSA:3.40.50.150 150 392 4.7E-53 T 29-03-2018 AM460_RS00955 62dc7a6a41ec569e89b9e5c481e6beed 396 Gene3D G3DSA:3.90.120.10 5 130 1.5E-16 T 29-03-2018 AM460_RS07165 b3ca8047b22b764e762e1adc0f979a1d 296 SUPERFAMILY SSF53822 9 294 1.11E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS07165 b3ca8047b22b764e762e1adc0f979a1d 296 Gene3D G3DSA:3.40.50.2300 20 142 1.6E-24 T 29-03-2018 AM460_RS07165 b3ca8047b22b764e762e1adc0f979a1d 296 Pfam PF13407 Periplasmic binding protein domain 31 280 6.5E-52 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS07165 b3ca8047b22b764e762e1adc0f979a1d 296 Gene3D G3DSA:3.40.50.2300 143 287 3.5E-30 T 29-03-2018 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 Pfam PF00186 Dihydrofolate reductase 1 158 3.5E-58 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 SUPERFAMILY SSF53597 1 159 1.07E-55 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 Gene3D G3DSA:3.40.430.10 1 159 1.2E-52 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 8.5E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 8.5E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 8.5E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 8.5E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 29-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AM460_RS26170 ce7c49af8b85e648e2e76cb6d1771f09 159 PIRSF PIRSF000194 1 159 7.0E-57 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 Pfam PF13604 AAA domain 968 1156 1.9E-34 T 29-03-2018 AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 SUPERFAMILY SSF52540 1089 1147 1.19E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 SUPERFAMILY SSF52540 1333 1458 1.19E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 SUPERFAMILY SSF52540 1223 1255 1.19E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 SUPERFAMILY SSF55464 1 304 1.97E-105 T 29-03-2018 AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 SUPERFAMILY SSF52540 937 1111 4.93E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 Gene3D G3DSA:3.40.50.300 903 1141 5.1E-16 T 29-03-2018 AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 1.8E-116 T 29-03-2018 IPR014059 Conjugative relaxase, N-terminal AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1466 0.0 T 29-03-2018 IPR014129 Conjugative transfer relaxase protein TraI AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 Gene3D G3DSA:3.40.50.300 1142 1473 6.4E-5 T 29-03-2018 AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 Pfam PF08751 TrwC relaxase 10 283 4.3E-75 T 29-03-2018 IPR014862 TrwC relaxase AM460_RS27995 1dbbdd4f8d482e95bbcc83746787ffac 1756 Pfam PF07057 DNA helicase TraI 1434 1552 1.6E-55 T 29-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 AM460_RS19965 b46150ecc1062aaecf44d64382e7b4b9 303 Gene3D G3DSA:3.30.420.40 1 112 9.8E-26 T 29-03-2018 AM460_RS19965 b46150ecc1062aaecf44d64382e7b4b9 303 SUPERFAMILY SSF53067 1 300 2.71E-62 T 29-03-2018 AM460_RS19965 b46150ecc1062aaecf44d64382e7b4b9 303 Pfam PF00480 ROK family 2 300 2.2E-70 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS19965 b46150ecc1062aaecf44d64382e7b4b9 303 Gene3D G3DSA:3.30.420.40 113 303 2.7E-50 T 29-03-2018 AM460_RS19965 b46150ecc1062aaecf44d64382e7b4b9 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 66.917 T 29-03-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 AM460_RS19965 b46150ecc1062aaecf44d64382e7b4b9 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS22050 f1746f3f2aa85f1e31caaafa5b00ba1e 240 Pfam PF00881 Nitroreductase family 11 159 3.8E-17 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM460_RS22050 f1746f3f2aa85f1e31caaafa5b00ba1e 240 PIRSF PIRSF005426 1 240 8.5E-83 T 29-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 AM460_RS22050 f1746f3f2aa85f1e31caaafa5b00ba1e 240 SUPERFAMILY SSF55469 1 239 3.53E-74 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS22050 f1746f3f2aa85f1e31caaafa5b00ba1e 240 Gene3D G3DSA:3.40.109.10 1 240 2.1E-57 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS12985 c1128b0ec3de53892191f41ca308e4be 153 Gene3D G3DSA:3.40.630.30 1 153 2.0E-30 T 29-03-2018 AM460_RS12985 c1128b0ec3de53892191f41ca308e4be 153 Pfam PF13673 Acetyltransferase (GNAT) domain 43 149 8.8E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS12985 c1128b0ec3de53892191f41ca308e4be 153 SUPERFAMILY SSF55729 1 150 2.96E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS21705 19a908c698c2bb5121d7fc83ea348a6e 131 Pfam PF10828 Protein of unknown function (DUF2570) 10 95 6.2E-7 T 29-03-2018 IPR022538 Protein of unknown function DUF2570 AM460_RS22795 6ba70115308dfa8cfee0c11f15e1da62 228 SUPERFAMILY SSF89562 17 195 7.59E-33 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM460_RS22795 6ba70115308dfa8cfee0c11f15e1da62 228 Gene3D G3DSA:3.50.30.40 14 205 7.4E-46 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM460_RS22795 6ba70115308dfa8cfee0c11f15e1da62 228 Pfam PF03737 Aldolase/RraA 19 184 1.8E-30 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM460_RS11060 5a38e54295740e7a88998156022717e8 66 Gene3D G3DSA:1.10.260.40 8 63 2.8E-4 T 29-03-2018 AM460_RS11060 5a38e54295740e7a88998156022717e8 66 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 13 64 5.2E-10 T 29-03-2018 IPR031856 Putative bacterial antitoxin YdaS AM460_RS12215 ded884cbdc1ad9162fd1f7548b7f6267 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 4.2E-112 T 29-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AM460_RS12215 ded884cbdc1ad9162fd1f7548b7f6267 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 7.3E-116 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM460_RS12215 ded884cbdc1ad9162fd1f7548b7f6267 291 SUPERFAMILY SSF161098 16 268 3.92E-52 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS12215 ded884cbdc1ad9162fd1f7548b7f6267 291 Gene3D G3DSA:1.10.3720.10 18 282 4.1E-40 T 29-03-2018 AM460_RS12215 ded884cbdc1ad9162fd1f7548b7f6267 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 2.0E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS03035 ea63a534005a2b2a3fd703edb9d247ad 139 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 1 119 2.0E-56 T 29-03-2018 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 AM460_RS03035 ea63a534005a2b2a3fd703edb9d247ad 139 Pfam PF13801 Heavy-metal resistance 9 120 1.9E-21 T 29-03-2018 IPR025961 Heavy-metal resistance protein AM460_RS25800 9530c890ce78a25b2b341abaaca9d1fe 62 SUPERFAMILY SSF54060 1 62 8.24E-10 T 29-03-2018 AM460_RS25800 9530c890ce78a25b2b341abaaca9d1fe 62 Gene3D G3DSA:3.90.540.10 1 62 9.2E-10 T 29-03-2018 AM460_RS14200 68cb946bbb95ef0a9daa472d133f680e 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 56 1.4E-13 T 29-03-2018 AM460_RS14200 68cb946bbb95ef0a9daa472d133f680e 83 Gene3D G3DSA:3.40.1620.10 1 52 1.2E-19 T 29-03-2018 AM460_RS14200 68cb946bbb95ef0a9daa472d133f680e 83 SUPERFAMILY SSF143120 1 81 3.53E-26 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM460_RS14200 68cb946bbb95ef0a9daa472d133f680e 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 4.2E-25 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM460_RS27985 e70d562eb42072704f5aabee324721f3 186 Pfam PF04352 ProQ/FINO family 74 176 1.4E-24 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS27985 e70d562eb42072704f5aabee324721f3 186 Pfam PF12602 Fertility inhibition protein N terminal 1 62 1.7E-34 T 29-03-2018 IPR021065 Fertility inhibition protein FinO, N-terminal AM460_RS27985 e70d562eb42072704f5aabee324721f3 186 Gene3D G3DSA:1.10.1710.10 33 184 1.6E-37 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS27985 e70d562eb42072704f5aabee324721f3 186 SMART SM00945 68 182 6.9E-36 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS27985 e70d562eb42072704f5aabee324721f3 186 SUPERFAMILY SSF48657 33 182 2.49E-45 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS06165 0443229b5604c5f3dbc81d2ce71f2ea7 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 2.9E-43 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM460_RS06165 0443229b5604c5f3dbc81d2ce71f2ea7 247 Gene3D G3DSA:3.20.20.190 2 243 3.0E-60 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM460_RS06165 0443229b5604c5f3dbc81d2ce71f2ea7 247 SUPERFAMILY SSF51695 5 239 1.23E-64 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 SUPERFAMILY SSF53335 9 189 4.82E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 SUPERFAMILY SSF53335 267 345 4.82E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 Pfam PF01555 DNA methylase 29 341 3.9E-42 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 1.2E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 63 83 1.2E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 302 320 1.2E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 325 345 1.2E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 283 300 1.2E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM460_RS11130 55000a31231f47e22da3fbdaa54011a6 350 Gene3D G3DSA:3.40.50.150 10 349 8.1E-56 T 29-03-2018 AM460_RS19800 0acfdc992a20f1816b64d778ed8dd597 76 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 5 68 1.8E-21 T 29-03-2018 IPR031856 Putative bacterial antitoxin YdaS AM460_RS19800 0acfdc992a20f1816b64d778ed8dd597 76 SUPERFAMILY SSF47413 5 64 6.22E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS19800 0acfdc992a20f1816b64d778ed8dd597 76 Gene3D G3DSA:3.30.240.10 1 76 1.2E-17 T 29-03-2018 AM460_RS21815 aa42b8349016d26e0199ddb11ab356cc 46 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 44 0.009 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS21815 aa42b8349016d26e0199ddb11ab356cc 46 Pfam PF01848 Hok/gef family 9 44 4.8E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS06060 5f7576ae25377f28389d220901852c51 208 Pfam PF07947 YhhN family 26 206 2.5E-42 T 29-03-2018 IPR012506 YhhN-like GO:0016021 AM460_RS21385 1b9b1f750daa552590d9013931932e39 150 Pfam PF05069 Phage virion morphogenesis family 3 149 1.4E-42 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS21385 1b9b1f750daa552590d9013931932e39 150 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 148 1.8E-34 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS21010 a94c016b63bc6606c56c183dc4d347ca 98 SUPERFAMILY SSF101386 17 64 3.55E-5 T 29-03-2018 AM460_RS21010 a94c016b63bc6606c56c183dc4d347ca 98 Gene3D G3DSA:1.10.287.1080 5 73 4.4E-4 T 29-03-2018 AM460_RS18540 788cf7e541750fb55331a081cbb9dc13 645 Pfam PF05065 Phage capsid family 387 635 1.1E-17 T 29-03-2018 IPR024455 Phage capsid AM460_RS18540 788cf7e541750fb55331a081cbb9dc13 645 SUPERFAMILY SSF56563 352 636 1.15E-29 T 29-03-2018 AM460_RS18540 788cf7e541750fb55331a081cbb9dc13 645 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 204 584 2.3E-22 T 29-03-2018 IPR024455 Phage capsid AM460_RS18540 788cf7e541750fb55331a081cbb9dc13 645 Gene3D G3DSA:3.30.2400.10 382 602 2.1E-16 T 29-03-2018 AM460_RS18540 788cf7e541750fb55331a081cbb9dc13 645 Pfam PF04586 Caudovirus prohead serine protease 48 152 1.2E-8 T 29-03-2018 IPR006433 Prohead protease AM460_RS18540 788cf7e541750fb55331a081cbb9dc13 645 Gene3D G3DSA:3.20.16.10 16 260 7.4E-28 T 29-03-2018 IPR035443 Herpesvirus/Caudovirus protease domain AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 5.6E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 5.6E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 5.6E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 5.6E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 5.6E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 2.0E-177 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 Gene3D G3DSA:3.40.710.10 20 477 9.4E-39 T 29-03-2018 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 46 447 1.4E-185 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM460_RS07540 ee16dba1dd4c61bf5926edada2c48943 477 SUPERFAMILY SSF56601 23 473 2.62E-100 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.287 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 SUPERFAMILY SSF51735 3 159 6.93E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.4E-24 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 Gene3D G3DSA:1.10.3730.10 160 269 5.6E-44 T 29-03-2018 AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 2.0E-38 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 PIRSF PIRSF000193 2 269 2.5E-99 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 SUPERFAMILY SSF48179 162 268 2.55E-37 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 4.2E-93 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM460_RS24445 1f8cc7f07a47da587d439c0eb77ef85b 269 Gene3D G3DSA:3.40.50.720 1 159 2.3E-34 T 29-03-2018 AM460_RS05895 bd5e418ea3eb759ee925367c199528ce 250 SUPERFAMILY SSF53335 10 246 5.32E-74 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS05895 bd5e418ea3eb759ee925367c199528ce 250 Gene3D G3DSA:3.40.50.150 57 249 1.4E-30 T 29-03-2018 AM460_RS05895 bd5e418ea3eb759ee925367c199528ce 250 Gene3D G3DSA:3.40.1630.10 3 56 2.2E-23 T 29-03-2018 AM460_RS05895 bd5e418ea3eb759ee925367c199528ce 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 4.0E-105 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM460_RS05895 bd5e418ea3eb759ee925367c199528ce 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.945 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM460_RS11345 7d6939038c4b04e9629b3b7bb4ee9578 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 121.696 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM460_RS11345 7d6939038c4b04e9629b3b7bb4ee9578 255 Gene3D G3DSA:3.40.1280.10 1 169 6.7E-73 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS11345 7d6939038c4b04e9629b3b7bb4ee9578 255 Gene3D G3DSA:1.10.1270.20 170 254 2.1E-36 T 29-03-2018 AM460_RS11345 7d6939038c4b04e9629b3b7bb4ee9578 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 5.4E-73 T 29-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM460_RS11345 7d6939038c4b04e9629b3b7bb4ee9578 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.2E-112 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM460_RS11345 7d6939038c4b04e9629b3b7bb4ee9578 255 SUPERFAMILY SSF75217 1 247 6.15E-103 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS11345 7d6939038c4b04e9629b3b7bb4ee9578 255 PIRSF PIRSF000386 1 253 3.2E-105 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.12 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 SUPERFAMILY SSF52540 4 170 1.46E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 43.126 T 29-03-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 Pfam PF01202 Shikimate kinase 11 168 5.3E-48 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 29 42 1.4E-25 T 29-03-2018 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 57 65 1.4E-25 T 29-03-2018 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 95 112 1.4E-25 T 29-03-2018 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 5 20 1.4E-25 T 29-03-2018 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 74 83 1.4E-25 T 29-03-2018 AM460_RS24435 35629e2fbd76b27ac71366f4d32bce1b 174 Gene3D G3DSA:3.40.50.300 1 173 3.3E-28 T 29-03-2018 AM460_RS06320 fc45ab32822cf6d6aa81bfa278b69369 438 PIRSF PIRSF002746 1 438 6.1E-160 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS06320 fc45ab32822cf6d6aa81bfa278b69369 438 Pfam PF02447 GntP family permease 1 437 3.3E-188 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS06320 fc45ab32822cf6d6aa81bfa278b69369 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 7.4E-204 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM460_RS00020 ed9f76d4079b8cc1f63bee430da3a497 253 Gene3D G3DSA:2.40.230.20 104 244 2.5E-7 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS00020 ed9f76d4079b8cc1f63bee430da3a497 253 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 120 253 6.3E-11 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS00020 ed9f76d4079b8cc1f63bee430da3a497 253 SUPERFAMILY SSF111364 30 253 8.37E-32 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 Pfam PF00248 Aldo/keto reductase family 15 257 9.0E-47 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 SUPERFAMILY SSF51430 3 262 1.44E-89 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 PIRSF PIRSF000097 111 271 6.9E-41 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 PIRSF PIRSF000097 1 115 8.3E-38 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 Gene3D G3DSA:3.20.20.100 1 273 7.1E-95 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 3.5E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 3.5E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 3.5E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.5E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS24885 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 3.5E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS05400 669266500dfc6f593f8c55bb5f22448d 676 PIRSF PIRSF036917 1 676 0.0 T 29-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AM460_RS05400 669266500dfc6f593f8c55bb5f22448d 676 SUPERFAMILY SSF51445 374 643 1.47E-72 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS05400 669266500dfc6f593f8c55bb5f22448d 676 SUPERFAMILY SSF51445 179 318 1.47E-72 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS05400 669266500dfc6f593f8c55bb5f22448d 676 Gene3D G3DSA:2.60.40.1180 643 673 0.32 T 29-03-2018 AM460_RS05400 669266500dfc6f593f8c55bb5f22448d 676 SMART SM00642 193 637 7.9E-84 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS05400 669266500dfc6f593f8c55bb5f22448d 676 Gene3D G3DSA:3.20.20.80 184 642 1.7E-75 T 29-03-2018 AM460_RS05400 669266500dfc6f593f8c55bb5f22448d 676 Pfam PF00128 Alpha amylase, catalytic domain 226 595 4.4E-36 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM460_RS08545 ea52332cb2bb7fff6c16aee08c7f9baf 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.0E-35 T 29-03-2018 IPR005134 Uncharacterised protein family UPF0114 AM460_RS08545 ea52332cb2bb7fff6c16aee08c7f9baf 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 5.0E-81 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM460_RS08545 ea52332cb2bb7fff6c16aee08c7f9baf 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.813 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM460_RS19665 86391b6c5008546f5f46beb79c1b5d3a 110 Pfam PF02924 Bacteriophage lambda head decoration protein D 4 106 4.8E-16 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 AM460_RS19665 86391b6c5008546f5f46beb79c1b5d3a 110 Gene3D G3DSA:2.40.300.10 16 109 1.3E-24 T 29-03-2018 AM460_RS19665 86391b6c5008546f5f46beb79c1b5d3a 110 SUPERFAMILY SSF51274 16 109 6.54E-44 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 AM460_RS19665 86391b6c5008546f5f46beb79c1b5d3a 110 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 24 110 1.0E-43 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 AM460_RS19500 519426c6cb4729f38c892ad1502527ab 88 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 30 88 6.0E-5 T 29-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 AM460_RS19500 519426c6cb4729f38c892ad1502527ab 88 Pfam PF10798 Biofilm development protein YmgB/AriR 29 87 6.2E-24 T 29-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 AM460_RS02340 456ecd0d0556e67d5ac36dfa63011465 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 2.3E-152 T 29-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM460_RS02340 456ecd0d0556e67d5ac36dfa63011465 354 PIRSF PIRSF007313 1 354 4.5E-157 T 29-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM460_RS25805 cbb1d7f0d60fa20c20d8fa6476c4b934 96 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 10 93 9.0E-44 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25805 cbb1d7f0d60fa20c20d8fa6476c4b934 96 SUPERFAMILY SSF47345 3 94 5.49E-32 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25805 cbb1d7f0d60fa20c20d8fa6476c4b934 96 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 93 4.8E-27 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25805 cbb1d7f0d60fa20c20d8fa6476c4b934 96 Gene3D G3DSA:1.10.1200.20 2 94 1.3E-29 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25805 cbb1d7f0d60fa20c20d8fa6476c4b934 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 5 23 1.1E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25805 cbb1d7f0d60fa20c20d8fa6476c4b934 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 72 93 1.1E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 Gene3D G3DSA:3.30.1330.10 31 161 1.3E-52 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 2.5E-155 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 SUPERFAMILY SSF56042 171 342 9.72E-65 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 7.0E-40 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 Gene3D G3DSA:3.90.650.10 171 345 1.5E-62 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 SUPERFAMILY SSF55326 7 170 1.11E-52 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 2.6E-15 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM460_RS11930 db9c2cd7cef60c8f74569b62ef98ceb1 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.006 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM460_RS00285 d2500097a1bd528bf8802a36b0d98bf5 1070 Pfam PF10145 Phage-related minor tail protein 160 371 4.1E-19 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS00285 d2500097a1bd528bf8802a36b0d98bf5 1070 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 119 493 2.0E-16 T 29-03-2018 IPR010090 Phage tail tape measure protein AM460_RS00285 d2500097a1bd528bf8802a36b0d98bf5 1070 Gene3D G3DSA:1.20.5.1230 730 967 6.6E-12 T 29-03-2018 AM460_RS00285 d2500097a1bd528bf8802a36b0d98bf5 1070 Gene3D G3DSA:1.20.5.1230 15 717 2.4E-9 T 29-03-2018 AM460_RS22990 d9a100e4d10907066f5b3a1a76cdf19b 156 Gene3D G3DSA:2.60.120.370 1 154 5.1E-33 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS22990 d9a100e4d10907066f5b3a1a76cdf19b 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.0E-27 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS22990 d9a100e4d10907066f5b3a1a76cdf19b 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 1.1E-27 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS22990 d9a100e4d10907066f5b3a1a76cdf19b 156 SUPERFAMILY SSF51197 1 154 7.14E-30 T 29-03-2018 AM460_RS16735 6427017f4729b4a19be366c55b8ebc01 457 PIRSF PIRSF006603 4 453 4.4E-59 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS16735 6427017f4729b4a19be366c55b8ebc01 457 Pfam PF01554 MatE 244 405 2.5E-38 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS16735 6427017f4729b4a19be366c55b8ebc01 457 Pfam PF01554 MatE 17 177 2.0E-41 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS16735 6427017f4729b4a19be366c55b8ebc01 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 7.2E-127 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM460_RS16735 6427017f4729b4a19be366c55b8ebc01 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 54.69 T 29-03-2018 IPR022913 Multidrug resistance protein MdtK AM460_RS14755 da1b16c516ace7632b287e85627f70de 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 16 243 6.2E-62 T 29-03-2018 IPR010384 MtfA family AM460_RS14755 da1b16c516ace7632b287e85627f70de 265 SUPERFAMILY SSF55486 33 245 4.32E-40 T 29-03-2018 AM460_RS14755 da1b16c516ace7632b287e85627f70de 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 63.312 T 29-03-2018 IPR010384 MtfA family AM460_RS14755 da1b16c516ace7632b287e85627f70de 265 Gene3D G3DSA:3.40.390.10 81 245 7.2E-22 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM460_RS05180 491ee9c08d1322f34f03dd1594892495 427 Pfam PF01551 Peptidase family M23 328 421 5.7E-26 T 29-03-2018 IPR016047 Peptidase M23 AM460_RS05180 491ee9c08d1322f34f03dd1594892495 427 Gene3D G3DSA:2.70.70.10 286 427 9.3E-33 T 29-03-2018 AM460_RS05180 491ee9c08d1322f34f03dd1594892495 427 SUPERFAMILY SSF51261 226 425 3.45E-47 T 29-03-2018 IPR011055 Duplicated hybrid motif AM460_RS05180 491ee9c08d1322f34f03dd1594892495 427 Gene3D G3DSA:1.20.5.50 138 268 0.023 T 29-03-2018 AM460_RS05180 491ee9c08d1322f34f03dd1594892495 427 Gene3D G3DSA:1.20.5.730 44 128 1.6E-5 T 29-03-2018 AM460_RS14605 6992c5e449dd9674528da9efc970b6e0 359 SUPERFAMILY SSF52733 6 344 2.88E-111 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS14605 6992c5e449dd9674528da9efc970b6e0 359 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 349 33.818 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS14605 6992c5e449dd9674528da9efc970b6e0 359 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 346 8.0E-117 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS14605 6992c5e449dd9674528da9efc970b6e0 359 Gene3D G3DSA:1.10.1610.10 5 72 9.1E-28 T 29-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS14605 6992c5e449dd9674528da9efc970b6e0 359 Gene3D G3DSA:3.40.50.10210 73 330 1.6E-94 T 29-03-2018 AM460_RS14605 6992c5e449dd9674528da9efc970b6e0 359 Pfam PF02277 Phosphoribosyltransferase 11 345 1.1E-117 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS06820 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:4.10.960.10 57 165 6.9E-35 T 29-03-2018 AM460_RS06820 4c31ca787dff2e8979a12d5731b91705 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.756 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06820 4c31ca787dff2e8979a12d5731b91705 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.2E-92 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06820 4c31ca787dff2e8979a12d5731b91705 209 Pfam PF00297 Ribosomal protein L3 27 182 1.0E-14 T 29-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06820 4c31ca787dff2e8979a12d5731b91705 209 SUPERFAMILY SSF50447 1 208 8.65E-81 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM460_RS06820 4c31ca787dff2e8979a12d5731b91705 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 29-03-2018 IPR019926 Ribosomal protein L3, conserved site AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 32.088 T 29-03-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 PRINTS PR00112 Acylphosphatase signature 26 51 1.3E-8 T 29-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 PRINTS PR00112 Acylphosphatase signature 5 20 1.3E-8 T 29-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 PRINTS PR00112 Acylphosphatase signature 61 81 1.3E-8 T 29-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 SUPERFAMILY SSF54975 2 92 6.76E-31 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 Gene3D G3DSA:3.30.70.100 2 92 1.1E-30 T 29-03-2018 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 Pfam PF00708 Acylphosphatase 8 91 2.8E-27 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS20695 6ef24d51a923547339435267a845d3c2 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM460_RS22125 9dbf9ce8120b14c0c53088d087bd7f43 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 127 6.0E-61 T 29-03-2018 IPR020359 Biofilm regulator BssR AM460_RS22125 9dbf9ce8120b14c0c53088d087bd7f43 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 126 1.1E-75 T 29-03-2018 IPR020359 Biofilm regulator BssR AM460_RS08300 94a679f6726826ab2cce8c8d720a11a5 223 Gene3D G3DSA:1.20.1550.10 14 223 2.2E-45 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM460_RS08300 94a679f6726826ab2cce8c8d720a11a5 223 SUPERFAMILY SSF158442 187 212 2.88E-31 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM460_RS08300 94a679f6726826ab2cce8c8d720a11a5 223 SUPERFAMILY SSF158442 28 157 2.88E-31 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM460_RS08300 94a679f6726826ab2cce8c8d720a11a5 223 Pfam PF02600 Disulfide bond formation protein DsbB 24 212 3.1E-40 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM460_RS08300 94a679f6726826ab2cce8c8d720a11a5 223 Hamap MF_01311 Protein-disulfide oxidoreductase DsbI [dsbI]. 6 223 60.735 T 29-03-2018 IPR023792 Protein-disulfide oxidoreductase DsbI AM460_RS23085 bf23401583b410850baf2635b1fd0b12 359 Gene3D G3DSA:3.40.50.300 127 334 1.6E-28 T 29-03-2018 AM460_RS23085 bf23401583b410850baf2635b1fd0b12 359 Pfam PF02562 PhoH-like protein 131 334 8.1E-96 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 AM460_RS23085 bf23401583b410850baf2635b1fd0b12 359 SUPERFAMILY SSF52540 130 331 2.67E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05310 38a0b603b04683c00be2e0ac44b4b8aa 431 Gene3D G3DSA:1.10.10.10 362 423 3.6E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05310 38a0b603b04683c00be2e0ac44b4b8aa 431 Pfam PF02661 Fic/DOC family 177 282 4.5E-22 T 29-03-2018 IPR003812 Fido domain AM460_RS05310 38a0b603b04683c00be2e0ac44b4b8aa 431 SUPERFAMILY SSF140931 156 347 9.16E-32 T 29-03-2018 IPR003812 Fido domain AM460_RS05310 38a0b603b04683c00be2e0ac44b4b8aa 431 Gene3D G3DSA:1.10.3290.10 90 354 4.9E-48 T 29-03-2018 IPR003812 Fido domain AM460_RS24960 197f5d62ecbb69177074a499ace1198b 222 Gene3D G3DSA:2.60.40.10 21 146 6.4E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS24960 197f5d62ecbb69177074a499ace1198b 222 SUPERFAMILY SSF49354 20 114 5.49E-5 T 29-03-2018 IPR008962 PapD-like AM460_RS15400 9493710e898b3889330dacccefc3a145 170 Pfam PF04985 Phage tail tube protein FII 8 164 7.4E-20 T 29-03-2018 IPR006498 Tail tube protein AM460_RS17560 85d7d681b97f3d781f7caa7227e46b6d 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 226 3.2E-125 T 29-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AM460_RS17560 85d7d681b97f3d781f7caa7227e46b6d 226 SUPERFAMILY SSF103501 3 225 4.32E-71 T 29-03-2018 IPR023234 NarG-like domain AM460_RS17560 85d7d681b97f3d781f7caa7227e46b6d 226 Pfam PF02665 Nitrate reductase gamma subunit 6 225 3.0E-78 T 29-03-2018 IPR023234 NarG-like domain AM460_RS17560 85d7d681b97f3d781f7caa7227e46b6d 226 Gene3D G3DSA:1.20.950.20 2 217 2.9E-43 T 29-03-2018 AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 Pfam PF13558 Putative exonuclease SbcCD, C subunit 930 1001 2.9E-15 T 29-03-2018 AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1039 0.0 T 29-03-2018 IPR004592 Nuclease SbcC, gammaproteobacteria type AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 SUPERFAMILY SSF52540 1 58 4.78E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 SUPERFAMILY SSF52540 248 403 4.78E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 SUPERFAMILY SSF52540 1 270 2.11E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 SUPERFAMILY SSF52540 822 1019 1.52E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 Gene3D G3DSA:3.40.50.300 774 1044 1.1E-19 T 29-03-2018 AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 Gene3D G3DSA:3.40.50.300 1 213 2.4E-33 T 29-03-2018 AM460_RS24385 c01d8671a099df22de9b90b43ee8b174 1047 Pfam PF13476 AAA domain 5 264 1.4E-27 T 29-03-2018 AM460_RS05440 47beff18562307003a618acb0786ca43 113 Pfam PF05360 yiaA/B two helix domain 6 50 2.8E-8 T 29-03-2018 IPR008024 YiaAB two helix AM460_RS23640 0c6b12a29072b1b600ba936f567c7a4d 296 Pfam PF14488 Domain of unknown function (DUF4434) 21 186 1.2E-32 T 29-03-2018 IPR027849 Protein of unknown function DUF4434 AM460_RS24105 96967c73a75f08b228882d0fb05f6fc5 286 SUPERFAMILY SSF54637 5 114 2.75E-42 T 29-03-2018 IPR029069 HotDog domain AM460_RS24105 96967c73a75f08b228882d0fb05f6fc5 286 Gene3D G3DSA:3.10.129.10 131 286 6.0E-53 T 29-03-2018 AM460_RS24105 96967c73a75f08b228882d0fb05f6fc5 286 Gene3D G3DSA:3.10.129.10 2 116 2.3E-43 T 29-03-2018 AM460_RS24105 96967c73a75f08b228882d0fb05f6fc5 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.7E-58 T 29-03-2018 AM460_RS24105 96967c73a75f08b228882d0fb05f6fc5 286 SUPERFAMILY SSF54637 116 284 1.22E-58 T 29-03-2018 IPR029069 HotDog domain AM460_RS24105 96967c73a75f08b228882d0fb05f6fc5 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.0E-105 T 29-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 AM460_RS03615 1264a4ca7dfe5c5b9c309cdb14bf44f7 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.178 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM460_RS03615 1264a4ca7dfe5c5b9c309cdb14bf44f7 309 SUPERFAMILY SSF144020 24 306 1.57E-99 T 29-03-2018 IPR024064 FdhE-like AM460_RS03615 1264a4ca7dfe5c5b9c309cdb14bf44f7 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 4.3E-157 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM460_RS03615 1264a4ca7dfe5c5b9c309cdb14bf44f7 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 8.5E-117 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM460_RS03615 1264a4ca7dfe5c5b9c309cdb14bf44f7 309 Gene3D G3DSA:3.90.1670.10 24 308 4.5E-102 T 29-03-2018 IPR024064 FdhE-like AM460_RS03615 1264a4ca7dfe5c5b9c309cdb14bf44f7 309 PIRSF PIRSF018296 1 309 4.7E-136 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM460_RS02420 3672f3fcc74f6a38cb4960cac1082670 309 Hamap MF_00988 D-allose kinase [alsK]. 1 301 69.367 T 29-03-2018 IPR030883 D-allose kinase GO:0019200|GO:0019316 KEGG: 00051+2.7.1.55 AM460_RS02420 3672f3fcc74f6a38cb4960cac1082670 309 Gene3D G3DSA:3.30.420.40 119 309 3.8E-40 T 29-03-2018 AM460_RS02420 3672f3fcc74f6a38cb4960cac1082670 309 ProSitePatterns PS01125 ROK family signature. 139 166 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS02420 3672f3fcc74f6a38cb4960cac1082670 309 Gene3D G3DSA:3.30.420.40 1 118 1.4E-16 T 29-03-2018 AM460_RS02420 3672f3fcc74f6a38cb4960cac1082670 309 Pfam PF00480 ROK family 9 298 1.0E-94 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS02420 3672f3fcc74f6a38cb4960cac1082670 309 SUPERFAMILY SSF53067 8 301 4.94E-45 T 29-03-2018 AM460_RS02290 94cd643f55d9852705f9e9cac810f609 742 Pfam PF00350 Dynamin family 72 277 6.1E-18 T 29-03-2018 IPR022812 Dynamin superfamily AM460_RS02290 94cd643f55d9852705f9e9cac810f609 742 Gene3D G3DSA:3.40.50.300 48 569 1.3E-31 T 29-03-2018 AM460_RS02290 94cd643f55d9852705f9e9cac810f609 742 SUPERFAMILY SSF52540 207 349 3.4E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02290 94cd643f55d9852705f9e9cac810f609 742 SUPERFAMILY SSF52540 57 168 3.4E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS01670 ce043ef45421c8430ec97dfe26c78c83 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.2E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS01670 ce043ef45421c8430ec97dfe26c78c83 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.2E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS01670 ce043ef45421c8430ec97dfe26c78c83 215 SUPERFAMILY SSF46689 10 83 2.74E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS01670 ce043ef45421c8430ec97dfe26c78c83 215 Gene3D G3DSA:1.10.10.60 6 61 7.8E-16 T 29-03-2018 AM460_RS01670 ce043ef45421c8430ec97dfe26c78c83 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.1E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM460_RS01670 ce043ef45421c8430ec97dfe26c78c83 215 Gene3D G3DSA:1.10.357.10 62 198 7.3E-15 T 29-03-2018 AM460_RS01670 ce043ef45421c8430ec97dfe26c78c83 215 SUPERFAMILY SSF48498 81 207 3.28E-26 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS01210 e5fe9810c996a139040c4f9194b4e2e9 425 Pfam PF10011 Predicted membrane protein (DUF2254) 14 370 1.9E-92 T 29-03-2018 IPR018723 Protein of unknown function DUF2254, membrane AM460_RS15845 7c59723287cf2dc2ab01dafad0d396e6 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.8E-47 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM460_RS15845 7c59723287cf2dc2ab01dafad0d396e6 263 Gene3D G3DSA:1.10.10.10 11 99 6.4E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15845 7c59723287cf2dc2ab01dafad0d396e6 263 Gene3D G3DSA:3.30.450.40 100 263 2.6E-53 T 29-03-2018 IPR029016 GAF domain-like AM460_RS15845 7c59723287cf2dc2ab01dafad0d396e6 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.2E-13 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS15845 7c59723287cf2dc2ab01dafad0d396e6 263 SUPERFAMILY SSF55781 77 259 2.68E-55 T 29-03-2018 IPR029016 GAF domain-like AM460_RS15845 7c59723287cf2dc2ab01dafad0d396e6 263 SUPERFAMILY SSF46785 13 86 1.43E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS15845 7c59723287cf2dc2ab01dafad0d396e6 263 SMART SM00346 13 102 8.0E-36 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS20710 48c49e22055e93dfad21c235114315a1 137 SUPERFAMILY SSF51735 4 135 1.44E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS20710 48c49e22055e93dfad21c235114315a1 137 Gene3D G3DSA:3.40.50.720 10 134 9.8E-33 T 29-03-2018 AM460_RS20710 48c49e22055e93dfad21c235114315a1 137 Pfam PF13380 CoA binding domain 15 130 7.5E-39 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS20710 48c49e22055e93dfad21c235114315a1 137 SMART SM00881 9 104 4.1E-26 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM460_RS19630 57434163929175950e17f991ccec3edc 140 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 125 4.8E-59 T 29-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail AM460_RS19630 57434163929175950e17f991ccec3edc 140 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 135 1.8E-63 T 29-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 Gene3D G3DSA:3.30.360.10 165 318 2.7E-52 T 29-03-2018 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 3.0E-199 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 SUPERFAMILY SSF51735 1 179 5.34E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.4E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.4E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 5.4E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.4E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.4E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 1.9E-54 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 66.378 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 Gene3D G3DSA:3.40.50.720 1 164 1.3E-67 T 29-03-2018 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 SUPERFAMILY SSF55347 155 317 1.13E-57 T 29-03-2018 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.6E-35 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 PIRSF PIRSF000149 1 338 3.8E-135 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS09545 e0183ec78b17e4f81371cbead6b912d1 339 SMART SM00846 3 155 3.5E-83 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM460_RS00980 a9a80c715a996d2b174c1492efb90acd 162 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 59 1.0E-24 T 29-03-2018 AM460_RS21120 f52e8cdc510210151d08b3f18870d47d 531 PIRSF PIRSF007056 17 530 3.4E-238 T 29-03-2018 IPR012036 Bacteriophage Mu, Gp28 AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 SUPERFAMILY SSF50891 26 189 7.01E-59 T 29-03-2018 IPR029000 Cyclophilin-like domain AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 3.1E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 3.1E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 3.1E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 PIRSF PIRSF001467 13 189 1.5E-27 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 Gene3D G3DSA:2.40.100.10 12 190 3.7E-54 T 29-03-2018 IPR029000 Cyclophilin-like domain AM460_RS06585 6ed557e63f9430a407a0ba7bc8dff3e8 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 4.2E-50 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM460_RS10675 023d3da89f2c060df22aebc6c7531b49 255 Gene3D G3DSA:3.40.50.700 21 179 1.3E-26 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10675 023d3da89f2c060df22aebc6c7531b49 255 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10675 023d3da89f2c060df22aebc6c7531b49 255 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 2.7E-23 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS10675 023d3da89f2c060df22aebc6c7531b49 255 SUPERFAMILY SSF56770 36 168 6.54E-50 T 29-03-2018 AM460_RS07695 efa6dd710a13a15c95333e9c7eb91fbd 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 2.0E-68 T 29-03-2018 IPR006286 Peptidase C56, PfpI AM460_RS07695 efa6dd710a13a15c95333e9c7eb91fbd 172 Pfam PF01965 DJ-1/PfpI family 3 167 1.2E-54 T 29-03-2018 IPR002818 DJ-1/PfpI AM460_RS07695 efa6dd710a13a15c95333e9c7eb91fbd 172 Gene3D G3DSA:3.40.50.880 1 172 5.2E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS07695 efa6dd710a13a15c95333e9c7eb91fbd 172 SUPERFAMILY SSF52317 3 170 9.73E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS00975 dab75fe34c114ab5a3826571250ab6ab 58 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 4 57 8.1E-36 T 29-03-2018 IPR009301 Protein of unknown function DUF957 AM460_RS18300 00ed2acece391bc2d4fba1e81e860271 83 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 7.5E-43 T 29-03-2018 IPR019633 Protein of unknown function DUF2498 AM460_RS25315 28a7814aeb6b097d83e34aff5982e20b 271 PIRSF PIRSF002854 1 271 8.3E-109 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM460_RS25315 28a7814aeb6b097d83e34aff5982e20b 271 Gene3D G3DSA:3.40.190.10 32 126 2.6E-21 T 29-03-2018 AM460_RS25315 28a7814aeb6b097d83e34aff5982e20b 271 SUPERFAMILY SSF53850 33 271 5.31E-85 T 29-03-2018 AM460_RS25315 28a7814aeb6b097d83e34aff5982e20b 271 Gene3D G3DSA:3.40.190.10 127 271 3.1E-51 T 29-03-2018 AM460_RS25315 28a7814aeb6b097d83e34aff5982e20b 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 4.5E-153 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM460_RS25315 28a7814aeb6b097d83e34aff5982e20b 271 Pfam PF03180 NLPA lipoprotein 33 271 4.2E-101 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:1.10.286.10 7 85 4.7E-21 T 29-03-2018 AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 Pfam PF01227 GTP cyclohydrolase I 41 218 2.2E-62 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.703 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 SUPERFAMILY SSF55620 4 221 1.11E-76 T 29-03-2018 AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 1.5E-86 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM460_RS13595 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:3.30.1130.10 90 221 6.5E-46 T 29-03-2018 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 Gene3D G3DSA:1.10.10.60 1 57 3.8E-17 T 29-03-2018 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.8E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.8E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 SUPERFAMILY SSF46689 4 56 2.09E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 SUPERFAMILY SSF46689 57 106 1.12E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 SMART SM00342 21 104 3.9E-34 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 Gene3D G3DSA:1.10.10.60 58 107 1.0E-13 T 29-03-2018 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM460_RS02600 777af84098a120aab0a33c6cb4269d71 107 Pfam PF12833 Helix-turn-helix domain 27 106 7.9E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM460_RS11775 e3d64133be961b2cd45501c5958f53bf 66 Gene3D G3DSA:1.10.10.600 2 64 1.1E-34 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM460_RS11775 e3d64133be961b2cd45501c5958f53bf 66 SUPERFAMILY SSF140319 3 64 4.45E-27 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM460_RS11775 e3d64133be961b2cd45501c5958f53bf 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 4.0E-33 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM460_RS11775 e3d64133be961b2cd45501c5958f53bf 66 PIRSF PIRSF039003 3 66 1.5E-33 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM460_RS11775 e3d64133be961b2cd45501c5958f53bf 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 7.7E-33 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 126 394 4.5E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 SUPERFAMILY SSF46548 9 135 1.41E-26 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 Gene3D G3DSA:3.40.50.720 253 365 1.9E-13 T 29-03-2018 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 7 113 4.2E-34 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 Gene3D G3DSA:3.50.50.60 366 411 7.0E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 PRINTS PR00419 Adrenodoxin reductase family signature 290 303 2.0E-17 T 29-03-2018 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 PRINTS PR00419 Adrenodoxin reductase family signature 126 148 2.0E-17 T 29-03-2018 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 PRINTS PR00419 Adrenodoxin reductase family signature 149 162 2.0E-17 T 29-03-2018 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 PRINTS PR00419 Adrenodoxin reductase family signature 256 270 2.0E-17 T 29-03-2018 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 Gene3D G3DSA:1.10.1060.10 2 122 8.1E-32 T 29-03-2018 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 SUPERFAMILY SSF51971 126 346 5.18E-47 T 29-03-2018 AM460_RS13635 7743a076255a581fac5f4272765b6d54 412 Gene3D G3DSA:3.40.50.720 123 252 2.6E-15 T 29-03-2018 AM460_RS28025 f357c9c180446e078d3fca89ac61f55f 457 Pfam PF06122 Conjugative relaxosome accessory transposon protein 29 377 3.2E-114 T 29-03-2018 IPR010927 Type IV conjugative transfer system protein TraH AM460_RS24225 36d939856eabb958448573a742f96596 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 5.9E-19 T 29-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AM460_RS24225 36d939856eabb958448573a742f96596 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 2.6E-38 T 29-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AM460_RS02110 2570cb8316ae4b95c2b5d701a994e9e2 444 PIRSF PIRSF006060 2 441 6.4E-49 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS02110 2570cb8316ae4b95c2b5d701a994e9e2 444 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 2 443 4.9E-147 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM460_RS02110 2570cb8316ae4b95c2b5d701a994e9e2 444 Pfam PF13520 Amino acid permease 7 416 1.8E-37 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS24020 c4bc397d91bfaa8a03e648a536fd087f 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 2.0E-41 T 29-03-2018 IPR007401 Protein of unknown function DUF454 AM460_RS24020 c4bc397d91bfaa8a03e648a536fd087f 125 PIRSF PIRSF016789 2 123 1.8E-51 T 29-03-2018 IPR007401 Protein of unknown function DUF454 AM460_RS18130 d1c9c9d00fe5adc7d3c745050311a17a 81 ProDom PD059807 YMJA ECS1872 1 81 1.0E-41 T 29-03-2018 IPR020251 Uncharacterised protein family, YmjA AM460_RS18130 d1c9c9d00fe5adc7d3c745050311a17a 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 4.3E-49 T 29-03-2018 IPR020251 Uncharacterised protein family, YmjA AM460_RS15295 5218bf268d4bf67983cabf706b4e8470 159 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 6 136 4.4E-41 T 29-03-2018 IPR013423 Conserved hypothetical protein CHP02594 AM460_RS15295 5218bf268d4bf67983cabf706b4e8470 159 Gene3D G3DSA:3.90.1720.10 3 142 9.3E-7 T 29-03-2018 AM460_RS16715 3c8e66eda7d56538e0615b266bbf6308 101 Pfam PF08803 Putative mono-oxygenase ydhR 4 98 3.9E-41 T 29-03-2018 IPR014910 Putative monooxygenase YdhR AM460_RS16715 3c8e66eda7d56538e0615b266bbf6308 101 SUPERFAMILY SSF54909 4 96 1.23E-33 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 173 193 3.7E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 194 215 3.7E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 87 3.7E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 48 67 3.7E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 106 3.7E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 243 3.7E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 5.4E-10 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 46 55 5.4E-10 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 234 244 5.4E-10 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 106 118 5.4E-10 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 132 5.4E-10 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 221 233 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 173 188 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 50 243 4.0E-73 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS25150 fe4e27e66359375be40bad77523035b3 250 Pfam PF00813 FliP family 50 240 3.8E-74 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS15205 b65045e69e664e9258cf269eafcaf0aa 103 Gene3D G3DSA:1.10.10.60 23 95 4.5E-4 T 29-03-2018 AM460_RS16095 6b98ef7658935aee60069fedf1b29199 294 Pfam PF01263 Aldose 1-epimerase 27 273 1.8E-46 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM460_RS16095 6b98ef7658935aee60069fedf1b29199 294 SUPERFAMILY SSF74650 8 273 3.64E-68 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS16095 6b98ef7658935aee60069fedf1b29199 294 Gene3D G3DSA:2.70.98.10 1 294 5.4E-64 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS16095 6b98ef7658935aee60069fedf1b29199 294 PIRSF PIRSF016020 10 294 5.4E-54 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AM460_RS20605 22d6146a6f8fda166566b0ed2143ac0f 57 Pfam PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system 2 54 4.5E-35 T 29-03-2018 IPR012563 Gns AM460_RS04675 a8a802f0d44be64679e9db985d203e64 85 Pfam PF01809 Haemolytic domain 10 75 1.1E-30 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM460_RS04675 a8a802f0d44be64679e9db985d203e64 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 6.1E-33 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM460_RS04675 a8a802f0d44be64679e9db985d203e64 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.359 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM460_RS04675 a8a802f0d44be64679e9db985d203e64 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 4.0E-21 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM460_RS04675 a8a802f0d44be64679e9db985d203e64 85 SMART SM01234 8 75 2.7E-45 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 ProSitePatterns PS00786 5'-nucleotidase signature 2. 102 113 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 Pfam PF02872 5'-nucleotidase, C-terminal domain 334 476 5.0E-39 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 PRINTS PR01607 Apyrase family signature 450 469 4.5E-21 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 PRINTS PR01607 Apyrase family signature 200 217 4.5E-21 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 PRINTS PR01607 Apyrase family signature 235 258 4.5E-21 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 PRINTS PR01607 Apyrase family signature 380 403 4.5E-21 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 PRINTS PR01607 Apyrase family signature 21 39 4.5E-21 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 SUPERFAMILY SSF55816 326 515 2.35E-48 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 Gene3D G3DSA:3.60.21.10 17 327 3.3E-76 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 SUPERFAMILY SSF56300 21 326 2.42E-73 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 Pfam PF00149 Calcineurin-like phosphoesterase 24 252 5.0E-12 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS03365 54b3476deef983c5eeae148ab9f0865d 517 Gene3D G3DSA:3.90.780.10 328 517 5.9E-51 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM460_RS09155 8e7def7711724bfc88d7d1314a89c1ea 580 Pfam PF04183 IucA / IucC family 130 372 2.4E-67 T 29-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AM460_RS09155 8e7def7711724bfc88d7d1314a89c1ea 580 Pfam PF06276 Ferric iron reductase FhuF-like transporter 395 549 2.6E-33 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain AM460_RS27865 71da2897ab10ce0880316f0acc47cd04 90 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 12 88 1.2E-32 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 AM460_RS27865 71da2897ab10ce0880316f0acc47cd04 90 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 45 61 3.7E-9 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 AM460_RS27865 71da2897ab10ce0880316f0acc47cd04 90 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 63 78 3.7E-9 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 AM460_RS27865 71da2897ab10ce0880316f0acc47cd04 90 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 25 40 3.7E-9 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 Gene3D G3DSA:3.30.230.10 1 166 2.6E-27 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.982 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 PRINTS PR00958 Homoserine kinase signature 97 112 3.7E-34 T 29-03-2018 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 PRINTS PR00958 Homoserine kinase signature 254 269 3.7E-34 T 29-03-2018 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 PRINTS PR00958 Homoserine kinase signature 9 24 3.7E-34 T 29-03-2018 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 PRINTS PR00958 Homoserine kinase signature 137 150 3.7E-34 T 29-03-2018 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 PRINTS PR00958 Homoserine kinase signature 175 192 3.7E-34 T 29-03-2018 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 TIGRFAM TIGR00191 thrB: homoserine kinase 2 309 1.1E-122 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 Gene3D G3DSA:3.30.70.890 168 310 3.9E-30 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 SUPERFAMILY SSF54211 1 162 2.2E-32 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 SUPERFAMILY SSF55060 172 289 2.88E-33 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 PIRSF PIRSF000676 1 310 5.7E-87 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 Pfam PF00288 GHMP kinases N terminal domain 85 150 6.2E-14 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM460_RS00090 fc1c86cde124bf1c300a219849204340 310 Pfam PF08544 GHMP kinases C terminal 212 281 6.7E-10 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 Gene3D G3DSA:1.10.287.100 108 139 0.0017 T 29-03-2018 AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 SMART SM00347 22 123 4.0E-32 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 SUPERFAMILY SSF46785 4 139 7.67E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.2E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.2E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.2E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.2E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 Pfam PF01047 MarR family 29 87 1.4E-18 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 Gene3D G3DSA:1.10.10.10 2 107 7.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM460_RS16855 a3bf28657cefbddba0e39f0da47f1c95 144 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 45.82 T 29-03-2018 IPR023071 Transcriptional regulator, SlyA AM460_RS04100 a6995b91b92e7545b37bc7dda31f8e72 254 Pfam PF09992 Phosphodiester glycosidase 84 235 5.5E-17 T 29-03-2018 IPR018711 Phosphodiester glycosidase AM460_RS06215 474daecec4fe2934a5192604236dac51 698 SUPERFAMILY SSF53271 567 693 2.92E-15 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS06215 474daecec4fe2934a5192604236dac51 698 Pfam PF00271 Helicase conserved C-terminal domain 242 340 1.3E-11 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS06215 474daecec4fe2934a5192604236dac51 698 Gene3D G3DSA:3.40.50.300 211 487 1.8E-33 T 29-03-2018 AM460_RS06215 474daecec4fe2934a5192604236dac51 698 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 143 152 - T 29-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AM460_RS06215 474daecec4fe2934a5192604236dac51 698 SUPERFAMILY SSF52540 66 361 1.42E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06215 474daecec4fe2934a5192604236dac51 698 SMART SM00490 253 341 8.1E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS06215 474daecec4fe2934a5192604236dac51 698 Pfam PF00270 DEAD/DEAH box helicase 24 194 6.6E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS06215 474daecec4fe2934a5192604236dac51 698 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 355 1.2E-74 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AM460_RS06215 474daecec4fe2934a5192604236dac51 698 Gene3D G3DSA:3.40.50.300 2 206 2.6E-29 T 29-03-2018 AM460_RS06215 474daecec4fe2934a5192604236dac51 698 SMART SM00487 17 217 1.6E-25 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS06215 474daecec4fe2934a5192604236dac51 698 Gene3D G3DSA:3.40.50.2020 538 697 1.1E-15 T 29-03-2018 AM460_RS22315 990bd9fe2738a4d96fea175fd8d7b5c3 361 Pfam PF02615 Malate/L-lactate dehydrogenase 8 338 1.0E-113 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS22315 990bd9fe2738a4d96fea175fd8d7b5c3 361 Gene3D G3DSA:1.20.5.460 282 309 1.2E-15 T 29-03-2018 AM460_RS22315 990bd9fe2738a4d96fea175fd8d7b5c3 361 Gene3D G3DSA:3.30.1370.60 78 280 4.5E-76 T 29-03-2018 AM460_RS22315 990bd9fe2738a4d96fea175fd8d7b5c3 361 SUPERFAMILY SSF89733 6 349 1.11E-106 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM460_RS22315 990bd9fe2738a4d96fea175fd8d7b5c3 361 Gene3D G3DSA:1.10.1530.10 5 77 3.5E-25 T 29-03-2018 AM460_RS14115 5bf59afe22297f7564ff43267e5c98c0 201 SUPERFAMILY SSF51161 37 194 8.18E-33 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS14115 5bf59afe22297f7564ff43267e5c98c0 201 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 146 174 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM460_RS14115 5bf59afe22297f7564ff43267e5c98c0 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 107 9.2E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS14115 5bf59afe22297f7564ff43267e5c98c0 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 138 172 3.2E-9 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS14115 5bf59afe22297f7564ff43267e5c98c0 201 Gene3D G3DSA:2.160.10.10 35 198 1.2E-31 T 29-03-2018 AM460_RS05305 e1c967b9e44798078423a57e782536bb 383 Gene3D G3DSA:3.40.50.1970 9 183 3.5E-47 T 29-03-2018 AM460_RS05305 e1c967b9e44798078423a57e782536bb 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS05305 e1c967b9e44798078423a57e782536bb 383 SUPERFAMILY SSF56796 5 382 1.31E-134 T 29-03-2018 AM460_RS05305 e1c967b9e44798078423a57e782536bb 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM460_RS05305 e1c967b9e44798078423a57e782536bb 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 4.2E-123 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS05305 e1c967b9e44798078423a57e782536bb 383 Gene3D G3DSA:1.20.1090.10 184 383 6.8E-69 T 29-03-2018 AM460_RS21910 6ab3595ad4fbfb7a94dad896931e9664 552 Gene3D G3DSA:3.40.50.300 1 348 5.4E-17 T 29-03-2018 AM460_RS21910 6ab3595ad4fbfb7a94dad896931e9664 552 SUPERFAMILY SSF52540 1 331 2.22E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS21910 6ab3595ad4fbfb7a94dad896931e9664 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 1.6E-155 T 29-03-2018 IPR022602 Protein of unknown function DUF2813 AM460_RS09930 c0142751ef9187bd5e467b23f736f408 346 Pfam PF00248 Aldo/keto reductase family 16 337 9.8E-72 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS09930 c0142751ef9187bd5e467b23f736f408 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 2.9E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS09930 c0142751ef9187bd5e467b23f736f408 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.9E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS09930 c0142751ef9187bd5e467b23f736f408 346 SUPERFAMILY SSF51430 1 344 4.06E-105 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS09930 c0142751ef9187bd5e467b23f736f408 346 Gene3D G3DSA:3.20.20.100 1 346 1.3E-93 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS12545 fbdd728629a01a38301ffdbfb101ae3b 334 Pfam PF05125 Phage major capsid protein, P2 family 15 327 6.8E-88 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM460_RS04660 b30ce09bc7c4b1d35e8b7ca02a233192 24 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 3 24 2.8E-12 T 29-03-2018 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 AM460_RS04660 b30ce09bc7c4b1d35e8b7ca02a233192 24 Pfam PF08053 Tryptophanase operon leader peptide 1 24 2.6E-20 T 29-03-2018 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 AM460_RS22250 8091372ffb1e79ebbdf2a52a58fbf354 295 Pfam PF00892 EamA-like transporter family 148 277 6.2E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS22250 8091372ffb1e79ebbdf2a52a58fbf354 295 SUPERFAMILY SSF103481 46 136 1.44E-6 T 29-03-2018 AM460_RS22250 8091372ffb1e79ebbdf2a52a58fbf354 295 SUPERFAMILY SSF103481 185 278 1.63E-10 T 29-03-2018 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 Pfam PF13458 Periplasmic binding protein 26 363 1.8E-61 T 29-03-2018 IPR028081 Leucine-binding protein domain AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 Gene3D G3DSA:3.40.50.2300 22 191 1.2E-38 T 29-03-2018 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 Gene3D G3DSA:3.40.50.2300 192 350 7.4E-19 T 29-03-2018 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 SUPERFAMILY SSF53822 24 364 1.88E-91 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 4.4E-67 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 4.4E-67 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 4.4E-67 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 4.4E-67 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 4.4E-67 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 4.4E-67 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS06120 ce983b53cf3c7311c2808c548ae0f1ce 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 4.4E-67 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM460_RS08170 ef4147859851b90c482996acbebca885 303 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 287 1.8E-123 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM460_RS08170 ef4147859851b90c482996acbebca885 303 Pfam PF05681 Fumarate hydratase (Fumerase) 16 284 2.7E-79 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 Pfam PF13710 ACT domain 12 73 2.8E-15 T 29-03-2018 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 SUPERFAMILY SSF55021 79 162 7.33E-26 T 29-03-2018 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 Gene3D G3DSA:3.30.70.1150 88 161 1.6E-24 T 29-03-2018 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-37 T 29-03-2018 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 3.7E-23 T 29-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 7.0E-69 T 29-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 SUPERFAMILY SSF55021 2 74 1.93E-22 T 29-03-2018 AM460_RS25995 febeb6c2343dfdcb5d71c621b1792cce 163 Gene3D G3DSA:3.30.70.260 2 87 1.3E-23 T 29-03-2018 AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 Pfam PF04348 LppC putative lipoprotein 346 672 5.5E-86 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 SUPERFAMILY SSF48435 50 150 1.44E-5 T 29-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 Gene3D G3DSA:3.40.50.2300 493 665 2.4E-14 T 29-03-2018 AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 Gene3D G3DSA:3.40.50.2300 255 347 2.8E-10 T 29-03-2018 AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 Gene3D G3DSA:3.40.50.2300 348 492 2.3E-33 T 29-03-2018 AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 Gene3D G3DSA:3.40.50.2300 163 241 0.05 T 29-03-2018 AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 672 36.472 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 SUPERFAMILY SSF53822 258 287 1.93E-71 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 SUPERFAMILY SSF53822 523 676 1.93E-71 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS07725 99a369dde639a2062dee24165bd846a0 678 SUPERFAMILY SSF53822 352 484 1.93E-71 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS21730 9eba02a7479babc421276b694af60fd5 116 Gene3D G3DSA:3.10.450.40 6 115 2.1E-23 T 29-03-2018 AM460_RS21730 9eba02a7479babc421276b694af60fd5 116 SUPERFAMILY SSF160719 16 113 1.83E-26 T 29-03-2018 AM460_RS21730 9eba02a7479babc421276b694af60fd5 116 Pfam PF04965 Gene 25-like lysozyme 19 103 3.2E-13 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM460_RS07880 806d23732eecf3a07d4a5478b9c46f34 129 Gene3D G3DSA:3.30.1330.40 1 129 4.9E-44 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS07880 806d23732eecf3a07d4a5478b9c46f34 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 126 5.4E-54 T 29-03-2018 IPR006056 RidA family AM460_RS07880 806d23732eecf3a07d4a5478b9c46f34 129 SUPERFAMILY SSF55298 3 127 4.87E-42 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS07880 806d23732eecf3a07d4a5478b9c46f34 129 Pfam PF01042 Endoribonuclease L-PSP 8 126 3.4E-44 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM460_RS07880 806d23732eecf3a07d4a5478b9c46f34 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 29-03-2018 IPR019897 RidA, conserved site AM460_RS01510 b46aae0668a6ea8340fbe6826d793e02 712 SUPERFAMILY SSF51998 121 687 2.17E-200 T 29-03-2018 AM460_RS01510 b46aae0668a6ea8340fbe6826d793e02 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM460_RS01510 b46aae0668a6ea8340fbe6826d793e02 712 Gene3D G3DSA:3.20.70.20 121 687 1.4E-211 T 29-03-2018 AM460_RS01510 b46aae0668a6ea8340fbe6826d793e02 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.7E-184 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AM460_RS01510 b46aae0668a6ea8340fbe6826d793e02 712 Pfam PF03477 ATP cone domain 4 89 2.0E-21 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM460_RS01510 b46aae0668a6ea8340fbe6826d793e02 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.5E-213 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AM460_RS13195 19eea1958b29039ca2c9f3b2cc3117a6 258 Gene3D G3DSA:2.60.120.380 45 230 7.3E-4 T 29-03-2018 AM460_RS13195 19eea1958b29039ca2c9f3b2cc3117a6 258 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 199 244 3.2E-18 T 29-03-2018 IPR019220 Domain of unknown function DUF2135 AM460_RS13195 19eea1958b29039ca2c9f3b2cc3117a6 258 PIRSF PIRSF012281 1 258 3.3E-128 T 29-03-2018 IPR012039 Uncharacterised conserved protein UCP012281 AM460_RS01890 fe3e07d970ca830a34d91a3fa7e4f9e2 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM460_RS01890 fe3e07d970ca830a34d91a3fa7e4f9e2 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM460_RS01890 fe3e07d970ca830a34d91a3fa7e4f9e2 102 Pfam PF17209 Hfq protein 7 69 4.9E-31 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM460_RS01890 fe3e07d970ca830a34d91a3fa7e4f9e2 102 Gene3D G3DSA:2.30.30.100 4 73 1.1E-33 T 29-03-2018 AM460_RS01890 fe3e07d970ca830a34d91a3fa7e4f9e2 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 29-03-2018 IPR010920 LSM domain AM460_RS04915 ba0822e5d185085e666e9ed46d2122e1 345 Pfam PF13310 Virulence protein RhuM family 70 323 1.8E-117 T 29-03-2018 IPR011204 Virulence protein RhuM-like AM460_RS04915 ba0822e5d185085e666e9ed46d2122e1 345 PIRSF PIRSF015268 4 345 1.1E-157 T 29-03-2018 IPR011204 Virulence protein RhuM-like AM460_RS06885 7db5f0a9ed08d687fd023064e70bb876 101 Gene3D G3DSA:4.10.830.10 1 101 8.7E-34 T 29-03-2018 AM460_RS06885 7db5f0a9ed08d687fd023064e70bb876 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.352 T 29-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AM460_RS06885 7db5f0a9ed08d687fd023064e70bb876 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.0E-26 T 29-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS06885 7db5f0a9ed08d687fd023064e70bb876 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 29-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06885 7db5f0a9ed08d687fd023064e70bb876 101 SUPERFAMILY SSF57716 2 101 8.55E-38 T 29-03-2018 AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.5E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.5E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.5E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.5E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 Gene3D G3DSA:3.40.50.720 1 235 5.6E-58 T 29-03-2018 AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 Pfam PF00106 short chain dehydrogenase 2 187 3.7E-54 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 4.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 4.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 SUPERFAMILY SSF51735 2 231 3.7E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17230 10aaf0c683e37ad929e363f1d7471787 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM460_RS03660 92aeca7c1694b35b147f60c05a306060 103 PIRSF PIRSF039032 1 103 5.7E-36 T 29-03-2018 IPR009387 Toxin HigB-2 AM460_RS25595 6ecfc47f047bb129e95927bee7ae4f7d 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 234 5.2E-105 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AM460_RS25595 6ecfc47f047bb129e95927bee7ae4f7d 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 5.7E-77 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AM460_RS25595 6ecfc47f047bb129e95927bee7ae4f7d 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 58.742 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AM460_RS17220 38b616c6eef1665d15a0661efb303c4a 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 3.9E-38 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ AM460_RS17220 38b616c6eef1665d15a0661efb303c4a 67 Pfam PF14001 YdfZ protein 3 65 1.1E-33 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ AM460_RS24795 7acef962d7915673386ea4d58651f0e0 264 SUPERFAMILY SSF46894 117 191 7.14E-12 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS24795 7acef962d7915673386ea4d58651f0e0 264 SMART SM00421 132 189 7.5E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS24795 7acef962d7915673386ea4d58651f0e0 264 Gene3D G3DSA:1.10.10.10 15 184 2.9E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24795 7acef962d7915673386ea4d58651f0e0 264 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 182 6.3E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM460_RS14005 a1a8b0777bebbf787f3e6c754072d3de 219 PIRSF PIRSF020634 17 219 1.1E-96 T 29-03-2018 IPR011392 Tellurite resistance, TerY AM460_RS14005 a1a8b0777bebbf787f3e6c754072d3de 219 SUPERFAMILY SSF53300 22 173 1.1E-19 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS14005 a1a8b0777bebbf787f3e6c754072d3de 219 Pfam PF00092 von Willebrand factor type A domain 24 173 1.9E-10 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS14005 a1a8b0777bebbf787f3e6c754072d3de 219 Gene3D G3DSA:3.40.50.410 2 179 9.5E-22 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS14005 a1a8b0777bebbf787f3e6c754072d3de 219 SMART SM00327 19 193 2.1E-18 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 5.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 5.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 5.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 5.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 5.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 5.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 Gene3D G3DSA:3.90.226.10 25 315 6.3E-69 T 29-03-2018 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.552 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.8E-173 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 SUPERFAMILY SSF52096 5 318 3.45E-103 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS25380 ecad122ea2e955a8f798d20bffccbf20 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.7E-62 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM460_RS20690 bbf4222a1453dc4f765e8aa2f0095e69 109 Pfam PF04358 DsrC like protein 4 109 8.0E-46 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM460_RS20690 bbf4222a1453dc4f765e8aa2f0095e69 109 Gene3D G3DSA:1.10.10.370 40 108 1.2E-33 T 29-03-2018 AM460_RS20690 bbf4222a1453dc4f765e8aa2f0095e69 109 Gene3D G3DSA:3.30.1420.10 2 39 2.3E-15 T 29-03-2018 AM460_RS20690 bbf4222a1453dc4f765e8aa2f0095e69 109 PIRSF PIRSF006223 2 109 2.5E-47 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM460_RS20690 bbf4222a1453dc4f765e8aa2f0095e69 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 5.8E-50 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM460_RS20690 bbf4222a1453dc4f765e8aa2f0095e69 109 SUPERFAMILY SSF69721 2 109 3.4E-42 T 29-03-2018 IPR025526 DsrC-like domain AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 189 2.1E-5 T 29-03-2018 AM460_RS22785 18e7ffffab71de251805680c8636810c 251 SUPERFAMILY SSF51735 8 249 6.94E-80 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS22785 18e7ffffab71de251805680c8636810c 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 2.6E-60 T 29-03-2018 AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.9E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM460_RS22785 18e7ffffab71de251805680c8636810c 251 Gene3D G3DSA:3.40.50.720 1 52 1.5E-9 T 29-03-2018 AM460_RS22785 18e7ffffab71de251805680c8636810c 251 Gene3D G3DSA:3.40.50.720 53 250 3.7E-59 T 29-03-2018 AM460_RS15590 2d04c04e771901c99c979f4272f0a0b7 188 Gene3D G3DSA:3.10.180.10 7 186 1.8E-79 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS15590 2d04c04e771901c99c979f4272f0a0b7 188 Pfam PF06185 YecM protein 10 185 1.0E-71 T 29-03-2018 IPR010393 Protein of unknown function DUF991 AM460_RS15590 2d04c04e771901c99c979f4272f0a0b7 188 SUPERFAMILY SSF54593 2 186 5.62E-71 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS21055 d76d343c30957ef0f310b6c4fd315100 102 SUPERFAMILY SSF46785 9 80 4.38E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS21055 d76d343c30957ef0f310b6c4fd315100 102 Pfam PF09339 IclR helix-turn-helix domain 12 57 2.3E-5 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS21055 d76d343c30957ef0f310b6c4fd315100 102 Gene3D G3DSA:1.10.10.10 3 82 4.6E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27645 51af1e89ead7f870df45f79d93905638 100 Pfam PF03230 Antirestriction protein 4 100 1.5E-28 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS27645 51af1e89ead7f870df45f79d93905638 100 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 1 100 7.0E-46 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS09225 9560bfcc1e8ca351d6fa10a4ea974223 77 SUPERFAMILY SSF46785 6 66 3.79E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS09225 9560bfcc1e8ca351d6fa10a4ea974223 77 ProDom PD007170 TRANSCRIPTION REGULATORY REGULATION FIMBRIA FIMBRIAL PLASMID ACTIVATOR PAPI OPERON PEFI 5 61 1.0E-27 T 29-03-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 AM460_RS09225 9560bfcc1e8ca351d6fa10a4ea974223 77 Pfam PF04703 FaeA-like protein 5 64 9.5E-30 T 29-03-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 AM460_RS09225 9560bfcc1e8ca351d6fa10a4ea974223 77 Gene3D G3DSA:1.10.10.10 1 71 5.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS21400 aad52ddd0809be1200907791e4df8a3d 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 7 140 3.8E-51 T 29-03-2018 IPR020000 Bacteriophage P2, LysB AM460_RS24420 f56ff73e7f6c423930890051121a4e41 225 Gene3D G3DSA:3.40.50.1860 12 225 2.8E-4 T 29-03-2018 AM460_RS24420 f56ff73e7f6c423930890051121a4e41 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 2.0E-123 T 29-03-2018 IPR010843 Uncharacterised protein family AroM AM460_RS24420 f56ff73e7f6c423930890051121a4e41 225 Pfam PF07302 AroM protein 5 224 8.9E-71 T 29-03-2018 IPR010843 Uncharacterised protein family AroM AM460_RS20915 3baae1711df4374f60b1039dfc6ec8e8 261 Pfam PF13847 Methyltransferase domain 45 162 6.3E-19 T 29-03-2018 IPR025714 Methyltransferase domain AM460_RS20915 3baae1711df4374f60b1039dfc6ec8e8 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 43.95 T 29-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AM460_RS20915 3baae1711df4374f60b1039dfc6ec8e8 261 Gene3D G3DSA:3.40.50.150 8 261 3.1E-60 T 29-03-2018 AM460_RS20915 3baae1711df4374f60b1039dfc6ec8e8 261 SUPERFAMILY SSF53335 6 241 3.8E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS10595 44b9e05aa81e35d4f78fc4c96a9e5f09 218 Gene3D G3DSA:3.60.21.10 3 218 1.8E-31 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS10595 44b9e05aa81e35d4f78fc4c96a9e5f09 218 Pfam PF00149 Calcineurin-like phosphoesterase 16 188 8.8E-16 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM460_RS10595 44b9e05aa81e35d4f78fc4c96a9e5f09 218 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 74 79 - T 29-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM460_RS10595 44b9e05aa81e35d4f78fc4c96a9e5f09 218 SUPERFAMILY SSF56300 6 217 1.82E-44 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM460_RS15895 47db7125f51b03a68b3081b13ec28e24 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 3.9E-62 T 29-03-2018 IPR009328 Protein of unknown function DUF986 AM460_RS15895 47db7125f51b03a68b3081b13ec28e24 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.437 T 29-03-2018 IPR009328 Protein of unknown function DUF986 AM460_RS15895 47db7125f51b03a68b3081b13ec28e24 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 21 148 3.0E-69 T 29-03-2018 IPR009328 Protein of unknown function DUF986 AM460_RS15895 47db7125f51b03a68b3081b13ec28e24 152 PIRSF PIRSF020687 1 152 1.8E-69 T 29-03-2018 IPR009328 Protein of unknown function DUF986 AM460_RS02730 01efe31ce17ab28919cdac4c52018f1d 426 Pfam PF01566 Natural resistance-associated macrophage protein 40 395 3.4E-59 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM460_RS21695 a1106ce202300a9708aa7c012047833d 107 Pfam PF05106 Phage holin family (Lysis protein S) 7 101 6.7E-22 T 29-03-2018 IPR006481 Bacteriophage lambda, GpS, holin AM460_RS23685 ad7313f1813ec09d7716ed78aa88e431 70 Pfam PF13275 S4 domain 9 69 6.4E-24 T 29-03-2018 AM460_RS23685 ad7313f1813ec09d7716ed78aa88e431 70 SUPERFAMILY SSF55174 7 69 9.16E-20 T 29-03-2018 AM460_RS23685 ad7313f1813ec09d7716ed78aa88e431 70 Gene3D G3DSA:3.10.290.10 1 70 2.1E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM460_RS27580 39e22c50c53223a6ee8f9f9037500d71 652 Gene3D G3DSA:3.90.1530.10 27 132 9.8E-19 T 29-03-2018 AM460_RS27580 39e22c50c53223a6ee8f9f9037500d71 652 SUPERFAMILY SSF109709 126 229 1.27E-20 T 29-03-2018 AM460_RS27580 39e22c50c53223a6ee8f9f9037500d71 652 Gene3D G3DSA:1.10.10.730 133 179 8.6E-8 T 29-03-2018 AM460_RS27580 39e22c50c53223a6ee8f9f9037500d71 652 SMART SM00470 36 132 4.8E-23 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS27580 39e22c50c53223a6ee8f9f9037500d71 652 SUPERFAMILY SSF110849 37 134 1.74E-12 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS27580 39e22c50c53223a6ee8f9f9037500d71 652 Pfam PF02195 ParB-like nuclease domain 37 131 3.0E-14 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS24030 cc32ead822779eb47b0d35b0b1cd1ea8 54 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 7.8E-24 T 29-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related AM460_RS21805 2e17f9db1772b35339551b6ca55ac5a6 369 SUPERFAMILY SSF69279 18 190 7.23E-27 T 29-03-2018 AM460_RS21805 2e17f9db1772b35339551b6ca55ac5a6 369 Pfam PF05954 Phage late control gene D protein (GPD) 51 349 1.3E-25 T 29-03-2018 AM460_RS21805 2e17f9db1772b35339551b6ca55ac5a6 369 Gene3D G3DSA:3.55.50.10 118 227 1.1E-4 T 29-03-2018 AM460_RS15730 4a1c07070894e863a7a7ed3c7f89aee7 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 7.5E-87 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM460_RS15730 4a1c07070894e863a7a7ed3c7f89aee7 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM460_RS15730 4a1c07070894e863a7a7ed3c7f89aee7 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 29-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM460_RS15730 4a1c07070894e863a7a7ed3c7f89aee7 213 Gene3D G3DSA:3.20.20.70 1 213 5.3E-32 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS15730 4a1c07070894e863a7a7ed3c7f89aee7 213 SUPERFAMILY SSF51569 3 209 6.23E-69 T 29-03-2018 AM460_RS15730 4a1c07070894e863a7a7ed3c7f89aee7 213 Pfam PF01081 KDPG and KHG aldolase 9 203 3.4E-94 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM460_RS08685 555be2aa7849ea2d16d14c952d8dc806 380 SUPERFAMILY SSF55729 145 377 4.33E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS08685 555be2aa7849ea2d16d14c952d8dc806 380 SUPERFAMILY SSF55729 9 117 4.33E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS08685 555be2aa7849ea2d16d14c952d8dc806 380 Gene3D G3DSA:3.40.630.30 8 137 0.0012 T 29-03-2018 AM460_RS08685 555be2aa7849ea2d16d14c952d8dc806 380 Gene3D G3DSA:3.40.630.30 184 376 1.6E-11 T 29-03-2018 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.702 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 Gene3D G3DSA:3.30.572.10 1 264 5.8E-135 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.8E-42 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.1E-94 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.6E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.6E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.6E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.6E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.6E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 29-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 SUPERFAMILY SSF55831 1 264 1.83E-132 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09965 188a9c3fc4031be2e94cdf304e4a6cb2 264 Pfam PF00303 Thymidylate synthase 2 264 2.9E-128 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM460_RS09505 84a2e1241dd5754e1edb26ab983ccd7d 169 SUPERFAMILY SSF158668 2 167 1.2E-54 T 29-03-2018 AM460_RS09505 84a2e1241dd5754e1edb26ab983ccd7d 169 Gene3D G3DSA:1.20.120.330 4 167 1.6E-47 T 29-03-2018 AM460_RS09505 84a2e1241dd5754e1edb26ab983ccd7d 169 Pfam PF05068 Mannitol repressor 5 167 1.5E-52 T 29-03-2018 IPR007761 Mannitol repressor MtlR-like AM460_RS05535 caae7656054caf096242629286e3594e 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 171 1.2E-18 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM460_RS05535 caae7656054caf096242629286e3594e 563 Gene3D G3DSA:3.40.720.10 242 544 1.8E-20 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS05535 caae7656054caf096242629286e3594e 563 Pfam PF00884 Sulfatase 250 538 3.4E-50 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS05535 caae7656054caf096242629286e3594e 563 SUPERFAMILY SSF53649 250 542 4.49E-20 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS24050 b135585b341397024703bc0195d3f308 397 SUPERFAMILY SSF111369 52 300 1.11E-89 T 29-03-2018 AM460_RS24050 b135585b341397024703bc0195d3f308 397 Gene3D G3DSA:1.20.1600.10 26 391 9.4E-37 T 29-03-2018 AM460_RS24050 b135585b341397024703bc0195d3f308 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 293 3.0E-13 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM460_RS24050 b135585b341397024703bc0195d3f308 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 1.1E-86 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS24050 b135585b341397024703bc0195d3f308 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 360 4.9E-14 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS27375 49809feeb2a92dd26e2b53bada34648d 49 PRINTS PR00281 Hok/Gef cell toxic protein family signature 4 22 5.4E-12 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27375 49809feeb2a92dd26e2b53bada34648d 49 PRINTS PR00281 Hok/Gef cell toxic protein family signature 24 46 5.4E-12 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27375 49809feeb2a92dd26e2b53bada34648d 49 Pfam PF01848 Hok/gef family 4 45 7.8E-18 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS27375 49809feeb2a92dd26e2b53bada34648d 49 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 9 28 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS27375 49809feeb2a92dd26e2b53bada34648d 49 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 6 46 3.0E-5 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 Pfam PF00462 Glutaredoxin 4 69 1.5E-17 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 SUPERFAMILY SSF52833 2 82 1.43E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 Gene3D G3DSA:3.40.30.10 1 83 2.9E-21 T 29-03-2018 AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 3 84 3.1E-45 T 29-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 66 79 1.2E-10 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 3 21 1.2E-10 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM460_RS22060 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 52 65 1.2E-10 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM460_RS08260 74c763abf8567dfb6f4f83a4e0a31454 217 Gene3D G3DSA:3.90.870.10 3 217 1.5E-92 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS08260 74c763abf8567dfb6f4f83a4e0a31454 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 1.5E-82 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS08260 74c763abf8567dfb6f4f83a4e0a31454 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.238 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS08260 74c763abf8567dfb6f4f83a4e0a31454 217 SUPERFAMILY SSF55821 7 213 5.95E-86 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM460_RS08260 74c763abf8567dfb6f4f83a4e0a31454 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.5E-86 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 4.6E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 4.6E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 4.6E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 4.6E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.6E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 4.6E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 SUPERFAMILY SSF56935 22 377 3.14E-87 T 29-03-2018 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.3E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.3E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 1.3E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 1.3E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.3E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 Gene3D G3DSA:2.40.160.10 10 377 8.4E-59 T 29-03-2018 AM460_RS17870 caa39a0491daa8866b4791fc8e5efab3 377 Pfam PF00267 Gram-negative porin 27 377 5.2E-153 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS20825 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 SUPERFAMILY SSF52218 1 166 4.04E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS20825 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 5.5E-34 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM460_RS20825 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 Gene3D G3DSA:3.40.50.360 1 179 3.1E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS20825 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 2.2E-73 T 29-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AM460_RS21535 28d23a316b4318eda4ed08bc4d0adf2c 208 SUPERFAMILY SSF52499 3 202 5.76E-54 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS21535 28d23a316b4318eda4ed08bc4d0adf2c 208 Gene3D G3DSA:3.40.50.850 1 208 8.4E-44 T 29-03-2018 AM460_RS21535 28d23a316b4318eda4ed08bc4d0adf2c 208 Pfam PF00857 Isochorismatase family 14 165 1.5E-21 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS10240 cf263bc6440a4d61df51f2a700d06fc6 366 Gene3D G3DSA:3.40.50.150 176 357 4.4E-22 T 29-03-2018 AM460_RS10240 cf263bc6440a4d61df51f2a700d06fc6 366 PIRSF PIRSF028774 1 360 1.1E-192 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM460_RS10240 cf263bc6440a4d61df51f2a700d06fc6 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 3.5E-8 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM460_RS10240 cf263bc6440a4d61df51f2a700d06fc6 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 87.539 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM460_RS10240 cf263bc6440a4d61df51f2a700d06fc6 366 SUPERFAMILY SSF53335 184 296 3.09E-13 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS08905 eedd627d06f70be2b0942ef5ca3b862a 502 Pfam PF13148 Protein of unknown function (DUF3987) 37 397 2.2E-91 T 29-03-2018 IPR025048 Protein of unknown function DUF3987) AM460_RS04245 b76cf0d3d4b407d7628d61ea808804bd 224 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 224 2.7E-97 T 29-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 AM460_RS04245 b76cf0d3d4b407d7628d61ea808804bd 224 SUPERFAMILY SSF55729 43 218 6.03E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS04245 b76cf0d3d4b407d7628d61ea808804bd 224 Gene3D G3DSA:3.40.630.30 87 224 2.3E-14 T 29-03-2018 AM460_RS04245 b76cf0d3d4b407d7628d61ea808804bd 224 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 224 43.82 T 29-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 AM460_RS05955 9c626cd8a39551d6eb5dbb9622674bc9 374 Gene3D G3DSA:3.40.1710.10 45 193 7.8E-21 T 29-03-2018 AM460_RS05955 9c626cd8a39551d6eb5dbb9622674bc9 374 Pfam PF12698 ABC-2 family transporter protein 26 364 9.5E-31 T 29-03-2018 AM460_RS18435 0862c3f64662be16edbcbad89bfba4e2 175 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 41 175 1.8E-36 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS25090 0e2ca7ea72b85a3484e7983d807e113c 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.275 T 29-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AM460_RS25090 0e2ca7ea72b85a3484e7983d807e113c 152 SUPERFAMILY SSF53271 4 144 6.29E-32 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM460_RS25090 0e2ca7ea72b85a3484e7983d807e113c 152 Gene3D G3DSA:3.40.50.2020 1 152 5.9E-27 T 29-03-2018 AM460_RS25090 0e2ca7ea72b85a3484e7983d807e113c 152 Pfam PF00156 Phosphoribosyl transferase domain 11 144 1.4E-15 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM460_RS07275 151b422c26fd33b2f3cfd70150ef827c 655 Pfam PF04632 Fusaric acid resistance protein family 11 652 1.3E-165 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM460_RS07275 151b422c26fd33b2f3cfd70150ef827c 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.795 T 29-03-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 AM460_RS25635 b2edc341c227ba02eb0f322b0b0f2cb9 190 SUPERFAMILY SSF49401 27 190 9.44E-15 T 29-03-2018 IPR008966 Adhesion domain AM460_RS25635 b2edc341c227ba02eb0f322b0b0f2cb9 190 Gene3D G3DSA:2.60.40.1090 26 190 3.0E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25635 b2edc341c227ba02eb0f322b0b0f2cb9 190 Pfam PF00419 Fimbrial protein 29 190 1.1E-22 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 SMART SM00345 7 66 1.9E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 Gene3D G3DSA:1.10.10.10 1 74 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 Pfam PF00155 Aminotransferase class I and II 145 445 5.3E-32 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.5E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 SUPERFAMILY SSF53383 91 466 4.44E-92 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 Gene3D G3DSA:3.90.1150.10 370 468 7.3E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 Gene3D G3DSA:3.40.640.10 120 369 2.5E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS17685 88066d26f60d2603fab8a5357923cab2 468 SUPERFAMILY SSF46785 2 75 4.08E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 SUPERFAMILY SSF55604 11 81 3.92E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 Pfam PF02378 Phosphotransferase system, EIIC 113 405 2.4E-31 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 31 112 8.3E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 448 1.4E-87 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 Pfam PF00367 phosphotransferase system, EIIB 13 40 1.1E-10 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 461 2.4E-223 T 29-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS01500 5cf1cd4c6eef82fb835c0eafa6ef752c 473 Gene3D G3DSA:3.30.1360.60 7 82 4.2E-22 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS12590 83dd2287d2d260cefe1c8779c61751ed 391 Pfam PF00589 Phage integrase family 206 370 1.1E-24 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS12590 83dd2287d2d260cefe1c8779c61751ed 391 Gene3D G3DSA:1.10.443.10 206 379 7.5E-28 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS12590 83dd2287d2d260cefe1c8779c61751ed 391 SUPERFAMILY SSF56349 99 379 2.94E-64 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS12590 83dd2287d2d260cefe1c8779c61751ed 391 Gene3D G3DSA:1.10.150.130 89 205 1.6E-16 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS12590 83dd2287d2d260cefe1c8779c61751ed 391 Pfam PF13356 Arm DNA-binding domain 3 87 1.6E-18 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM460_RS10645 7c014da7678627aa1a03e7bcc1127e24 153 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 1.2E-75 T 29-03-2018 IPR021285 Transcription regulator, HycA AM460_RS14660 3118bed52ee8b35397453a5047d24274 438 SUPERFAMILY SSF103473 21 435 3.01E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS14660 3118bed52ee8b35397453a5047d24274 438 Gene3D G3DSA:1.20.1250.20 245 438 5.3E-20 T 29-03-2018 AM460_RS14660 3118bed52ee8b35397453a5047d24274 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM460_RS14660 3118bed52ee8b35397453a5047d24274 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 2.1E-151 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM460_RS14660 3118bed52ee8b35397453a5047d24274 438 Pfam PF07690 Major Facilitator Superfamily 274 431 7.6E-11 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS14660 3118bed52ee8b35397453a5047d24274 438 Pfam PF00083 Sugar (and other) transporter 28 237 8.7E-18 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM460_RS14660 3118bed52ee8b35397453a5047d24274 438 Gene3D G3DSA:1.20.1250.20 12 236 1.1E-20 T 29-03-2018 AM460_RS04255 350238918f8d47f1fbdb9f297d824385 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 3.3E-164 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM460_RS04255 350238918f8d47f1fbdb9f297d824385 355 SUPERFAMILY SSF51735 1 339 2.52E-96 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS04255 350238918f8d47f1fbdb9f297d824385 355 Gene3D G3DSA:3.40.50.720 1 194 2.9E-38 T 29-03-2018 AM460_RS04255 350238918f8d47f1fbdb9f297d824385 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 4.7E-99 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS04255 350238918f8d47f1fbdb9f297d824385 355 Gene3D G3DSA:3.90.25.10 195 351 1.8E-50 T 29-03-2018 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 SMART SM01005 234 358 2.0E-61 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.9E-70 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 SUPERFAMILY SSF51419 8 235 1.13E-68 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 Hamap MF_01201 Alanine racemase. 1 358 34.581 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 Gene3D G3DSA:2.40.37.10 217 359 2.4E-52 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 7.5E-151 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 SUPERFAMILY SSF50621 228 358 2.2E-43 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 267 282 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 288 305 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 155 166 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 192 219 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 60 78 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 340 353 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 26 42 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 250 265 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 PRINTS PR00992 Alanine racemase signature 120 132 7.8E-77 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 4.3E-39 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS02705 d29ce13d814da72b3fc8321217e6cc56 359 Gene3D G3DSA:3.20.20.10 1 216 9.5E-46 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS22395 da9651dc099599f97114d25fc0619de8 150 SUPERFAMILY SSF54690 6 150 1.03E-54 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS22395 da9651dc099599f97114d25fc0619de8 150 Pfam PF02391 MoaE protein 11 121 1.5E-36 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS22395 da9651dc099599f97114d25fc0619de8 150 Gene3D G3DSA:3.90.1170.40 2 149 5.5E-56 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM460_RS26190 5878e204ad339e50a54dca9fafdb30ec 95 Gene3D G3DSA:3.30.70.20 38 71 2.1E-5 T 29-03-2018 AM460_RS26190 5878e204ad339e50a54dca9fafdb30ec 95 SUPERFAMILY SSF54862 40 90 1.72E-8 T 29-03-2018 AM460_RS26190 5878e204ad339e50a54dca9fafdb30ec 95 PIRSF PIRSF036548 1 95 1.5E-38 T 29-03-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 AM460_RS00845 046b0165a90413ae6bb9798d423074cb 878 Pfam PF13953 PapC C-terminal domain 799 863 3.1E-25 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM460_RS00845 046b0165a90413ae6bb9798d423074cb 878 Pfam PF00577 Outer membrane usher protein 208 790 3.1E-229 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM460_RS00845 046b0165a90413ae6bb9798d423074cb 878 SUPERFAMILY SSF141729 46 170 1.7E-37 T 29-03-2018 AM460_RS00845 046b0165a90413ae6bb9798d423074cb 878 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 325 335 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM460_RS00845 046b0165a90413ae6bb9798d423074cb 878 Pfam PF13954 PapC N-terminal domain 48 193 2.9E-50 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM460_RS13695 605211dc2144d3983df778e68204d67c 192 Gene3D G3DSA:1.20.1250.20 3 180 0.0012 T 29-03-2018 AM460_RS13695 605211dc2144d3983df778e68204d67c 192 Pfam PF09335 SNARE associated Golgi protein 23 143 1.0E-16 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS25830 d27eab636a7e2817a650e3e42cef469f 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 3.2E-158 T 29-03-2018 IPR031347 Protein AmpE AM460_RS07520 3a22854b60f2d397294992484f1a8b31 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.3E-45 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07520 3a22854b60f2d397294992484f1a8b31 103 SUPERFAMILY SSF141091 1 102 4.45E-37 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07520 3a22854b60f2d397294992484f1a8b31 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 29-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS07520 3a22854b60f2d397294992484f1a8b31 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.783 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07520 3a22854b60f2d397294992484f1a8b31 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.3E-37 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS11170 6df381516d2cf4ab0f705ab254a7183f 502 Pfam PF05136 Phage portal protein, lambda family 35 372 1.3E-80 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AM460_RS11170 6df381516d2cf4ab0f705ab254a7183f 502 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 31 476 2.6E-137 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AM460_RS20935 d15389471341f407af85ca71d74bae9f 60 Gene3D G3DSA:2.20.25.10 8 60 7.7E-18 T 29-03-2018 AM460_RS20935 d15389471341f407af85ca71d74bae9f 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.895 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM460_RS20935 d15389471341f407af85ca71d74bae9f 60 SUPERFAMILY SSF158997 1 55 6.93E-20 T 29-03-2018 AM460_RS20935 d15389471341f407af85ca71d74bae9f 60 Pfam PF03966 Trm112p-like protein 2 41 1.6E-8 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM460_RS12785 64c47a44fefdd67a0dc725472ab6d306 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 3.0E-70 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM460_RS12785 64c47a44fefdd67a0dc725472ab6d306 189 Pfam PF02441 Flavoprotein 2 165 1.0E-23 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM460_RS12785 64c47a44fefdd67a0dc725472ab6d306 189 SUPERFAMILY SSF52507 2 178 2.88E-59 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM460_RS12785 64c47a44fefdd67a0dc725472ab6d306 189 Gene3D G3DSA:3.40.50.1950 2 189 1.0E-52 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM460_RS12785 64c47a44fefdd67a0dc725472ab6d306 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.006 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM460_RS19595 d30a0dffa13e89a835490742454b7924 1160 Pfam PF13550 Putative phage tail protein 330 498 1.2E-40 T 29-03-2018 IPR032876 Tip attachment protein J AM460_RS19595 d30a0dffa13e89a835490742454b7924 1160 Gene3D G3DSA:2.60.40.10 614 806 5.3E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS19595 d30a0dffa13e89a835490742454b7924 1160 Pfam PF12421 Fibronectin type III protein 977 1118 1.6E-36 T 29-03-2018 IPR021034 Domain of unknown function, DUF3672 AM460_RS19595 d30a0dffa13e89a835490742454b7924 1160 Pfam PF09327 Domain of unknown function (DUF1983) 873 953 2.9E-22 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 AM460_RS19595 d30a0dffa13e89a835490742454b7924 1160 SUPERFAMILY SSF49265 617 719 1.56E-5 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM460_RS19720 894f38eda34ebb356a3f279b9f2ebfc2 60 Pfam PF06085 Lipoprotein Rz1 precursor 20 59 2.3E-20 T 29-03-2018 IPR010346 Spanin, outer membrane subunit GO:0019076|GO:0019835 AM460_RS21715 4f2f6fd576e51b67ea03dfebe14bc9f5 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 129 1.6E-33 T 29-03-2018 IPR009678 Bacteriophage tail completion protein R AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 Pfam PF02120 Flagellar hook-length control protein FliK 249 328 9.8E-20 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 2 15 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 117 140 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 213 235 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 55 71 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 20 37 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 261 279 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 358 374 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 279 294 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 236 258 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS14925 86aec54c499c2dfec8731db291e1de0d 375 PRINTS PR01007 Flagellar hook-length control protein signature 294 317 8.3E-117 T 29-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM460_RS15455 293fc125bd19577f66b8e43351db1f08 107 Pfam PF13992 YecR-like lipoprotein 27 98 1.2E-27 T 29-03-2018 IPR025731 YecR-like lipoprotein AM460_RS13800 0ade4e774b5e65534fed2dc41dae98d0 1253 Gene3D G3DSA:2.20.140.10 1 72 1.2E-15 T 29-03-2018 IPR008893 WGR domain AM460_RS13800 0ade4e774b5e65534fed2dc41dae98d0 1253 SUPERFAMILY SSF142921 11 66 2.09E-9 T 29-03-2018 IPR008893 WGR domain AM460_RS13800 0ade4e774b5e65534fed2dc41dae98d0 1253 Pfam PF13569 Domain of unknown function (DUF4132) 977 1162 1.2E-47 T 29-03-2018 IPR025406 Domain of unknown function DUF4132 AM460_RS13800 0ade4e774b5e65534fed2dc41dae98d0 1253 SMART SM00773 1 73 3.3E-17 T 29-03-2018 IPR008893 WGR domain AM460_RS13800 0ade4e774b5e65534fed2dc41dae98d0 1253 Pfam PF05406 WGR domain 8 67 1.0E-16 T 29-03-2018 IPR008893 WGR domain AM460_RS01735 e5627408e2fc40eb9c6a1116a2708f64 104 SUPERFAMILY SSF50249 1 103 1.75E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS01735 e5627408e2fc40eb9c6a1116a2708f64 104 Pfam PF00436 Single-strand binding protein family 3 87 3.9E-13 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM460_RS01735 e5627408e2fc40eb9c6a1116a2708f64 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 1.6E-36 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM460_RS01735 e5627408e2fc40eb9c6a1116a2708f64 104 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 23.998 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM460_RS01735 e5627408e2fc40eb9c6a1116a2708f64 104 PIRSF PIRSF003135 1 101 2.5E-50 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM460_RS01735 e5627408e2fc40eb9c6a1116a2708f64 104 Gene3D G3DSA:2.40.50.140 2 104 6.5E-13 T 29-03-2018 AM460_RS04440 9f0be77d9917763c8c42a8459a9228f5 321 Gene3D G3DSA:1.10.3470.10 38 320 1.9E-38 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS04440 9f0be77d9917763c8c42a8459a9228f5 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 1.8E-50 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS12045 585c743eab0b8111ad2ffa60405c76dc 191 Gene3D G3DSA:3.90.79.10 1 191 9.8E-38 T 29-03-2018 AM460_RS12045 585c743eab0b8111ad2ffa60405c76dc 191 SUPERFAMILY SSF55811 11 188 4.06E-50 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS12045 585c743eab0b8111ad2ffa60405c76dc 191 Pfam PF00293 NUDIX domain 45 163 2.6E-9 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS12045 585c743eab0b8111ad2ffa60405c76dc 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 2 186 2.3E-80 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM460_RS09620 fe0484ca5c4f82ce8b6524749994064d 200 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 13 194 1.1E-53 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM460_RS09620 fe0484ca5c4f82ce8b6524749994064d 200 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 13 194 2.2E-45 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM460_RS09620 fe0484ca5c4f82ce8b6524749994064d 200 PIRSF PIRSF006806 9 197 6.6E-37 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM460_RS09620 fe0484ca5c4f82ce8b6524749994064d 200 SUPERFAMILY SSF100950 12 200 4.33E-57 T 29-03-2018 AM460_RS09620 fe0484ca5c4f82ce8b6524749994064d 200 Gene3D G3DSA:3.40.50.10420 5 200 1.9E-59 T 29-03-2018 AM460_RS27050 3502e2099eda9c353f129e5d8837d0de 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 67 4.5E-14 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM460_RS27050 3502e2099eda9c353f129e5d8837d0de 73 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 37 61 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM460_RS27050 3502e2099eda9c353f129e5d8837d0de 73 PRINTS PR00618 DksA/TraR zinc finger signature 37 48 1.9E-6 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS27050 3502e2099eda9c353f129e5d8837d0de 73 PRINTS PR00618 DksA/TraR zinc finger signature 49 61 1.9E-6 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM460_RS27050 3502e2099eda9c353f129e5d8837d0de 73 SUPERFAMILY SSF57716 36 72 5.56E-9 T 29-03-2018 AM460_RS27050 3502e2099eda9c353f129e5d8837d0de 73 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 66 3.4E-23 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM460_RS20930 7c71d92caec846354575072e9d871d63 248 Gene3D G3DSA:3.90.550.10 1 248 6.5E-53 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS20930 7c71d92caec846354575072e9d871d63 248 SUPERFAMILY SSF53448 3 245 9.01E-68 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS20930 7c71d92caec846354575072e9d871d63 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.607 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM460_RS20930 7c71d92caec846354575072e9d871d63 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 4.0E-138 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM460_RS20930 7c71d92caec846354575072e9d871d63 248 Pfam PF02348 Cytidylyltransferase 4 221 3.7E-73 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AM460_RS27760 b2af183f17ebf0b1c3265b55b091f792 73 Gene3D G3DSA:3.40.1620.10 1 58 9.3E-19 T 29-03-2018 AM460_RS27760 b2af183f17ebf0b1c3265b55b091f792 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 54 1.7E-13 T 29-03-2018 AM460_RS27760 b2af183f17ebf0b1c3265b55b091f792 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 51 4.4E-14 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM460_RS27760 b2af183f17ebf0b1c3265b55b091f792 73 SUPERFAMILY SSF143120 1 70 1.44E-12 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM460_RS02385 069542d10ca377d3c2d70c55cb722232 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 145 2.9E-77 T 29-03-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 AM460_RS02385 069542d10ca377d3c2d70c55cb722232 149 PIRSF PIRSF005384 2 148 7.5E-61 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM460_RS02385 069542d10ca377d3c2d70c55cb722232 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 146 1.3E-63 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM460_RS02385 069542d10ca377d3c2d70c55cb722232 149 SUPERFAMILY SSF89623 2 145 1.18E-57 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM460_RS02385 069542d10ca377d3c2d70c55cb722232 149 Pfam PF02502 Ribose/Galactose Isomerase 4 141 2.7E-54 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM460_RS02385 069542d10ca377d3c2d70c55cb722232 149 Gene3D G3DSA:3.40.1400.10 1 149 4.0E-64 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM460_RS04815 3f2e9e2a49d27e0d2acea42aff61fb19 394 Pfam PF07690 Major Facilitator Superfamily 14 349 4.0E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS04815 3f2e9e2a49d27e0d2acea42aff61fb19 394 SUPERFAMILY SSF103473 4 388 1.19E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04815 3f2e9e2a49d27e0d2acea42aff61fb19 394 Gene3D G3DSA:1.20.1250.20 1 194 5.2E-31 T 29-03-2018 AM460_RS04815 3f2e9e2a49d27e0d2acea42aff61fb19 394 Gene3D G3DSA:1.20.1250.20 196 390 7.4E-7 T 29-03-2018 AM460_RS04815 3f2e9e2a49d27e0d2acea42aff61fb19 394 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 50 186 6.1E-39 T 29-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 1.3E-80 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 243 18.199 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 ProSitePatterns PS01218 TatC family signature. 154 173 - T 29-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AM460_RS03890 8cc1f795ae368b83b9d7df73e4ac56fd 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.2E-67 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM460_RS21995 871e57acd61164ecb3799e3d96dfe186 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.8E-17 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS21995 871e57acd61164ecb3799e3d96dfe186 222 SUPERFAMILY SSF161098 6 201 1.57E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS21995 871e57acd61164ecb3799e3d96dfe186 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 3.5E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS21995 871e57acd61164ecb3799e3d96dfe186 222 Gene3D G3DSA:1.10.3720.10 1 221 1.6E-28 T 29-03-2018 AM460_RS00030 6f115f83682d28c28310227aa33a57c8 69 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 24 68 1.0E-5 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS00030 6f115f83682d28c28310227aa33a57c8 69 Pfam PF01848 Hok/gef family 25 66 1.1E-20 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS00030 6f115f83682d28c28310227aa33a57c8 69 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM460_RS00030 6f115f83682d28c28310227aa33a57c8 69 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 1.2E-13 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS00030 6f115f83682d28c28310227aa33a57c8 69 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 1.2E-13 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS20190 6450356cbbec0ae2e20afcac02c50fb1 231 Pfam PF13860 FlgD Ig-like domain 118 189 9.5E-24 T 29-03-2018 IPR025965 FlgD Ig-like domain AM460_RS20190 6450356cbbec0ae2e20afcac02c50fb1 231 Pfam PF13861 FlgD Tudor-like domain 87 228 2.3E-16 T 29-03-2018 IPR025963 FlgD Tudor-like domain AM460_RS20190 6450356cbbec0ae2e20afcac02c50fb1 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 79 1.1E-24 T 29-03-2018 IPR005648 Flagellar hook capping protein AM460_RS15885 eb018e169cbdc2b55397b440c2326260 206 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 19 203 25.746 T 29-03-2018 IPR022929 Putative manganese efflux pump MntP AM460_RS15885 eb018e169cbdc2b55397b440c2326260 206 Pfam PF02659 Putative manganese efflux pump 49 200 1.5E-53 T 29-03-2018 IPR003810 Putative manganese efflux pump AM460_RS20095 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM460_RS20095 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS20095 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-17 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM460_RS20095 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM460_RS20095 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM460_RS20095 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 1 78 8.2E-29 T 29-03-2018 AM460_RS20095 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 SUPERFAMILY SSF56059 113 314 8.49E-56 T 29-03-2018 AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 Gene3D G3DSA:3.30.1490.20 129 197 1.1E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 Gene3D G3DSA:3.30.470.20 198 392 5.1E-35 T 29-03-2018 AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 SUPERFAMILY SSF51246 319 391 3.3E-18 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 1.0E-195 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 Gene3D G3DSA:3.40.50.20 14 112 1.9E-20 T 29-03-2018 AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 Pfam PF02222 ATP-grasp domain 123 295 1.2E-56 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 SUPERFAMILY SSF52440 3 112 1.35E-36 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS15735 311fe91ddd6938813665fd9bd07ab852 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 52.346 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM460_RS08675 c38ab57decf258d13066f880c25d4a68 304 Gene3D G3DSA:3.40.50.720 1 303 9.6E-51 T 29-03-2018 AM460_RS08675 c38ab57decf258d13066f880c25d4a68 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 198 9.6E-22 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM460_RS08675 c38ab57decf258d13066f880c25d4a68 304 SUPERFAMILY SSF51735 268 300 7.36E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS08675 c38ab57decf258d13066f880c25d4a68 304 SUPERFAMILY SSF51735 1 241 7.36E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18740 1f76c7467b8c4528233c55c2ad9e1b6e 62 Pfam PF05358 DicB protein 1 62 2.4E-40 T 29-03-2018 IPR008022 DicB AM460_RS18740 1f76c7467b8c4528233c55c2ad9e1b6e 62 ProDom PD053043 DIVISION CELL INHIBITION INHIBITOR ENCODED DICB PROPHAGE BY WITHIN CP- 1 62 6.0E-30 T 29-03-2018 IPR008022 DicB AM460_RS15570 dbec1650f886181b9b32476719574033 382 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 353 4.0E-140 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AM460_RS15570 dbec1650f886181b9b32476719574033 382 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 346 4.8E-123 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS15570 dbec1650f886181b9b32476719574033 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 1.1E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS15570 dbec1650f886181b9b32476719574033 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 1.1E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS15570 dbec1650f886181b9b32476719574033 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 1.1E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS15570 dbec1650f886181b9b32476719574033 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 1.1E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS15570 dbec1650f886181b9b32476719574033 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.1E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM460_RS15570 dbec1650f886181b9b32476719574033 382 Gene3D G3DSA:3.40.1690.10 217 352 3.1E-58 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM460_RS15570 dbec1650f886181b9b32476719574033 382 SUPERFAMILY SSF160544 243 350 6.28E-41 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM460_RS12275 f1a099b93e456c2952c8a26a5d2fa285 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 1.7E-29 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM460_RS12275 f1a099b93e456c2952c8a26a5d2fa285 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 2.0E-24 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM460_RS15935 6a36a06e430375d1c1b372aac45438db 454 Gene3D G3DSA:3.30.1330.90 10 158 1.2E-51 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM460_RS15935 6a36a06e430375d1c1b372aac45438db 454 Pfam PF03315 Serine dehydratase beta chain 3 155 7.3E-57 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM460_RS15935 6a36a06e430375d1c1b372aac45438db 454 SUPERFAMILY SSF143548 16 158 1.02E-46 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM460_RS15935 6a36a06e430375d1c1b372aac45438db 454 Pfam PF03313 Serine dehydratase alpha chain 186 448 7.1E-95 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM460_RS15935 6a36a06e430375d1c1b372aac45438db 454 Gene3D G3DSA:1.10.4100.10 264 444 1.4E-33 T 29-03-2018 AM460_RS15935 6a36a06e430375d1c1b372aac45438db 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.4E-231 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 Gene3D G3DSA:3.30.365.10 463 598 7.2E-35 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 SUPERFAMILY SSF54665 5 158 4.19E-39 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 700 1.5E-161 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 139 1.7E-35 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 Gene3D G3DSA:3.90.1170.50 2 139 5.9E-35 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 SUPERFAMILY SSF56003 143 757 4.06E-177 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 Gene3D G3DSA:3.30.365.10 276 433 6.6E-43 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 Gene3D G3DSA:3.30.365.10 168 275 1.9E-29 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 SMART SM01008 23 139 1.4E-44 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM460_RS09855 9935ada195b1e2cfd28fbd23543c3ffb 765 Gene3D G3DSA:3.30.365.10 599 761 5.5E-42 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 Gene3D G3DSA:1.10.10.10 4 73 7.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 SUPERFAMILY SSF48008 98 230 3.4E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 SUPERFAMILY SSF46785 6 75 2.02E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 SMART SM00895 100 224 8.5E-19 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 Gene3D G3DSA:1.20.120.530 82 244 3.5E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 5.1E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 Pfam PF07729 FCD domain 100 222 1.2E-21 T 29-03-2018 IPR011711 GntR, C-terminal AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.4E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.4E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS05230 e37d5c569bd4539fb00e59b214470b8d 258 SMART SM00345 12 71 1.7E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM460_RS21810 d25ecf427feeb262279383ed489c951f 86 Pfam PF04606 Ogr/Delta-like zinc finger 3 50 5.8E-13 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type AM460_RS04720 5ead7332b2e590892871a22450e06376 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 29-03-2018 AM460_RS04720 5ead7332b2e590892871a22450e06376 270 Gene3D G3DSA:3.40.50.1000 1 270 2.3E-47 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04720 5ead7332b2e590892871a22450e06376 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.0E-31 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM460_RS04720 5ead7332b2e590892871a22450e06376 270 SUPERFAMILY SSF56784 1 269 1.88E-76 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04720 5ead7332b2e590892871a22450e06376 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.1E-76 T 29-03-2018 IPR000150 Cof family GO:0016787 AM460_RS04720 5ead7332b2e590892871a22450e06376 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 1.9E-67 T 29-03-2018 IPR023214 HAD-like domain AM460_RS04720 5ead7332b2e590892871a22450e06376 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 29-03-2018 AM460_RS23280 fd4a6d8675a2fc8528655396523c811d 461 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.4E-197 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AM460_RS23280 fd4a6d8675a2fc8528655396523c811d 461 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 5.6E-136 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM460_RS07425 5bb437dfbbabba6e96122e3e5bd18614 284 Gene3D G3DSA:3.40.50.300 1 152 2.0E-11 T 29-03-2018 AM460_RS07425 5bb437dfbbabba6e96122e3e5bd18614 284 PIRSF PIRSF005052 1 284 3.9E-114 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AM460_RS07425 5bb437dfbbabba6e96122e3e5bd18614 284 SUPERFAMILY SSF52540 2 151 5.03E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07425 5bb437dfbbabba6e96122e3e5bd18614 284 Pfam PF03668 P-loop ATPase protein family 1 282 2.6E-147 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AM460_RS07425 5bb437dfbbabba6e96122e3e5bd18614 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.009 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 29-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:3.30.1550.10 3 72 1.6E-34 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.571 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF46906 68 141 1.09E-25 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 SMART SM00649 9 141 4.6E-84 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:1.10.10.250 73 141 6.7E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 29-03-2018 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF54747 3 73 5.49E-30 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 3.2E-65 T 29-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03135 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.5E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 SUPERFAMILY SSF56931 39 288 1.7E-92 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 Gene3D G3DSA:2.40.230.10 33 289 9.8E-96 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 Pfam PF02253 Phospholipase A1 43 285 9.7E-90 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 253 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 278 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS04070 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 1.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM460_RS10850 5f1886fd924cc280731fb2124a9f1bd1 235 Pfam PF09414 RNA ligase 38 205 4.2E-25 T 29-03-2018 IPR021122 RNA ligase domain, REL/Rln2 AM460_RS10850 5f1886fd924cc280731fb2124a9f1bd1 235 SUPERFAMILY SSF56091 182 228 1.19E-31 T 29-03-2018 AM460_RS10850 5f1886fd924cc280731fb2124a9f1bd1 235 SUPERFAMILY SSF56091 10 145 1.19E-31 T 29-03-2018 AM460_RS25690 5a654d6b4a409f2a7797b441e72ace17 146 Gene3D G3DSA:3.40.50.510 1 137 1.1E-21 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS25690 5a654d6b4a409f2a7797b441e72ace17 146 Pfam PF03610 PTS system fructose IIA component 3 116 7.2E-30 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS25690 5a654d6b4a409f2a7797b441e72ace17 146 SUPERFAMILY SSF53062 1 124 1.31E-28 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM460_RS27465 654bef48dd304ffc17b5eb390b4c60eb 94 PIRSF PIRSF003265 2 94 1.9E-55 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ AM460_RS27465 654bef48dd304ffc17b5eb390b4c60eb 94 TIGRFAM TIGR02741 TraQ: type-F conjugative transfer system pilin chaperone TraQ 2 94 6.7E-54 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ AM460_RS27465 654bef48dd304ffc17b5eb390b4c60eb 94 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 3 91 1.1E-42 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ AM460_RS05290 bdf43d94844e8e1113c69c49f67c0e25 202 Gene3D G3DSA:3.40.30.10 1 88 1.2E-16 T 29-03-2018 AM460_RS05290 bdf43d94844e8e1113c69c49f67c0e25 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 5.8E-13 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS05290 bdf43d94844e8e1113c69c49f67c0e25 202 SUPERFAMILY SSF52833 1 100 1.28E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS05290 bdf43d94844e8e1113c69c49f67c0e25 202 Gene3D G3DSA:1.20.1050.10 89 202 1.4E-13 T 29-03-2018 AM460_RS05290 bdf43d94844e8e1113c69c49f67c0e25 202 SUPERFAMILY SSF47616 73 199 3.13E-15 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS05290 bdf43d94844e8e1113c69c49f67c0e25 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 97 192 5.4E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM460_RS22370 aec67fb531730d6561715dc445c35522 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 33 244 1.6E-13 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS22370 aec67fb531730d6561715dc445c35522 253 SUPERFAMILY SSF56219 8 251 3.27E-54 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS22370 aec67fb531730d6561715dc445c35522 253 Gene3D G3DSA:3.60.10.10 2 252 1.1E-35 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM460_RS04480 8afd1646fcb95f0dc1e10af137beb701 147 Gene3D G3DSA:3.40.50.360 1 147 5.0E-29 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS04480 8afd1646fcb95f0dc1e10af137beb701 147 Pfam PF00258 Flavodoxin 7 138 6.4E-23 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM460_RS04480 8afd1646fcb95f0dc1e10af137beb701 147 SUPERFAMILY SSF52218 1 146 4.76E-38 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS21930 6d179eb04a916a41cd4b6df124a786ed 299 Pfam PF03956 Lysine exporter LysO 113 297 1.1E-57 T 29-03-2018 IPR005642 Lysine exporter LysO AM460_RS21930 6d179eb04a916a41cd4b6df124a786ed 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 7.0E-69 T 29-03-2018 IPR005642 Lysine exporter LysO AM460_RS10290 fe42cfca8432ab930e60f20578f9fe21 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 1.1E-186 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS14785 49c9de831ad0b8a8712d88e857e57a73 334 SUPERFAMILY SSF56524 75 330 3.27E-95 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM460_RS14785 49c9de831ad0b8a8712d88e857e57a73 334 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 5 334 55.175 T 29-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AM460_RS14785 49c9de831ad0b8a8712d88e857e57a73 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 267 3.4E-30 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM460_RS14785 49c9de831ad0b8a8712d88e857e57a73 334 Gene3D G3DSA:3.90.420.10 64 334 5.1E-64 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM460_RS15925 a26f4541e13f5f48b320c36752d290b1 518 Pfam PF03741 Integral membrane protein TerC family 14 203 9.1E-49 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM460_RS15925 a26f4541e13f5f48b320c36752d290b1 518 Gene3D G3DSA:3.30.465.10 429 511 2.4E-18 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM460_RS15925 a26f4541e13f5f48b320c36752d290b1 518 Gene3D G3DSA:3.10.580.10 281 428 1.8E-22 T 29-03-2018 AM460_RS15925 a26f4541e13f5f48b320c36752d290b1 518 SUPERFAMILY SSF54631 288 422 3.41E-22 T 29-03-2018 AM460_RS15925 a26f4541e13f5f48b320c36752d290b1 518 Pfam PF03471 Transporter associated domain 434 509 2.4E-17 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS15925 a26f4541e13f5f48b320c36752d290b1 518 SUPERFAMILY SSF56176 432 517 3.82E-18 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM460_RS15925 a26f4541e13f5f48b320c36752d290b1 518 SMART SM01091 431 511 3.5E-21 T 29-03-2018 IPR005170 Transporter-associated domain AM460_RS18490 0a3406ec9f886e48d4e1b8ac95f907aa 1080 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 157 231 1.9E-23 T 29-03-2018 IPR013491 Caudovirus, tape measure, N-terminal AM460_RS18490 0a3406ec9f886e48d4e1b8ac95f907aa 1080 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 862 933 9.3E-19 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM460_RS18490 0a3406ec9f886e48d4e1b8ac95f907aa 1080 Pfam PF06120 Tail length tape measure protein 395 689 7.3E-97 T 29-03-2018 IPR009302 Tail length tape measure AM460_RS18490 0a3406ec9f886e48d4e1b8ac95f907aa 1080 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 725 1043 1.2E-71 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM460_RS16785 45f9fe2120fe7425dbd6ed7af627b278 275 Pfam PF00877 NlpC/P60 family 157 267 4.0E-33 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM460_RS16785 45f9fe2120fe7425dbd6ed7af627b278 275 Gene3D G3DSA:2.30.260.10 193 273 2.9E-19 T 29-03-2018 AM460_RS16785 45f9fe2120fe7425dbd6ed7af627b278 275 SUPERFAMILY SSF54001 137 269 1.28E-41 T 29-03-2018 AM460_RS16785 45f9fe2120fe7425dbd6ed7af627b278 275 Gene3D G3DSA:3.90.1720.10 98 192 2.6E-17 T 29-03-2018 AM460_RS11280 977ce8806a2aa645622b342adb4254db 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 29-03-2018 IPR020081 SsrA-binding protein, conserved site AM460_RS11280 977ce8806a2aa645622b342adb4254db 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.7E-54 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM460_RS11280 977ce8806a2aa645622b342adb4254db 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.317 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM460_RS11280 977ce8806a2aa645622b342adb4254db 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-69 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM460_RS11280 977ce8806a2aa645622b342adb4254db 160 SUPERFAMILY SSF74982 8 138 7.19E-51 T 29-03-2018 IPR023620 Small protein B AM460_RS11280 977ce8806a2aa645622b342adb4254db 160 Gene3D G3DSA:2.40.280.10 14 133 2.9E-46 T 29-03-2018 IPR023620 Small protein B AM460_RS11280 977ce8806a2aa645622b342adb4254db 160 Pfam PF01668 SmpB protein 14 157 2.0E-57 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 Gene3D G3DSA:3.10.20.70 1 96 1.8E-26 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 SUPERFAMILY SSF55931 94 460 3.63E-139 T 29-03-2018 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 SUPERFAMILY SSF54368 2 91 1.7E-34 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 ProSitePatterns PS00180 Glutamine synthetase signature 1. 42 60 - T 29-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 SMART SM01230 94 371 5.2E-152 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 Pfam PF00120 Glutamine synthetase, catalytic domain 95 458 2.3E-140 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 Gene3D G3DSA:3.30.590.10 97 449 3.0E-124 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 2 460 7.4E-220 T 29-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 378 390 - T 29-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM460_RS03740 5537088dc6c1b152353d434324e9ad54 461 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 6 87 6.7E-32 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM460_RS19825 f08e9f56912ae112bf273a8bb51c041b 261 Pfam PF03837 RecT family 24 98 1.2E-14 T 29-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 AM460_RS19825 f08e9f56912ae112bf273a8bb51c041b 261 Pfam PF03837 RecT family 104 182 3.4E-12 T 29-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 AM460_RS19825 f08e9f56912ae112bf273a8bb51c041b 261 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 12 176 2.3E-50 T 29-03-2018 IPR010183 Bacteriophage lambda, Bet AM460_RS15450 f280d9f948d7fad2e551a8eb6e58ff3f 165 Pfam PF00210 Ferritin-like domain 7 143 1.5E-35 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM460_RS15450 f280d9f948d7fad2e551a8eb6e58ff3f 165 Gene3D G3DSA:1.20.1260.10 1 161 1.6E-41 T 29-03-2018 IPR012347 Ferritin-related AM460_RS15450 f280d9f948d7fad2e551a8eb6e58ff3f 165 SUPERFAMILY SSF47240 3 161 3.54E-56 T 29-03-2018 IPR009078 Ferritin-like superfamily AM460_RS02015 8e45ccea21f648f7711eaa8914e50a61 48 Pfam PF08085 Entericidin EcnA/B family 23 43 1.8E-8 T 29-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AM460_RS09570 55b54be58e91513eeb6837d709d1dc8d 246 Pfam PF04402 Protein of unknown function (DUF541) 30 230 1.5E-44 T 29-03-2018 IPR007497 Protein of unknown function DUF541 AM460_RS01200 aee874c6437bc71dbc247e5bebee5593 667 ProSitePatterns PS01303 BCCT family of transporters signature. 323 332 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS01200 aee874c6437bc71dbc247e5bebee5593 667 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 59 506 9.9E-163 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM460_RS01200 aee874c6437bc71dbc247e5bebee5593 667 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 21 506 7.3E-195 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM460_RS04150 42471d9dea418bb2970fee9518a77755 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 1.2E-80 T 29-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AM460_RS04150 42471d9dea418bb2970fee9518a77755 848 PIRSF PIRSF001444 1 847 0.0 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM460_RS04150 42471d9dea418bb2970fee9518a77755 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM460_RS04150 42471d9dea418bb2970fee9518a77755 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM460_RS04150 42471d9dea418bb2970fee9518a77755 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 5.9E-259 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM460_RS06155 8a8d66bfc54ff75224d6fd622f63a8bb 281 SUPERFAMILY SSF161098 4 277 5.76E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06155 8a8d66bfc54ff75224d6fd622f63a8bb 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 2.3E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS06155 8a8d66bfc54ff75224d6fd622f63a8bb 281 Gene3D G3DSA:1.10.3720.10 68 278 4.4E-31 T 29-03-2018 AM460_RS16970 eda53ec1597317f3de9437fbeb58ab55 390 Gene3D G3DSA:3.90.1150.10 275 390 4.0E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS16970 eda53ec1597317f3de9437fbeb58ab55 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 1.4E-113 T 29-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM460_RS16970 eda53ec1597317f3de9437fbeb58ab55 390 SUPERFAMILY SSF53383 1 386 5.92E-84 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS16970 eda53ec1597317f3de9437fbeb58ab55 390 Pfam PF00155 Aminotransferase class I and II 30 379 2.4E-59 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS16970 eda53ec1597317f3de9437fbeb58ab55 390 Gene3D G3DSA:3.40.640.10 42 274 6.1E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 8.6E-33 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 Pfam PF02378 Phosphotransferase system, EIIC 17 277 2.0E-20 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 3.9E-192 T 29-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 SUPERFAMILY SSF55804 496 634 1.2E-40 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 SUPERFAMILY SSF52794 377 466 5.75E-22 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 Gene3D G3DSA:3.40.50.2300 365 471 7.3E-21 T 29-03-2018 AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 Gene3D G3DSA:3.40.930.10 492 637 3.2E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS05275 4614132cc11ec634fb3913eac9fa59b1 637 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 453 3.0E-9 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS14540 4ca5e0940cb5f44461415fc9eb8ee7bc 257 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 22 257 1.1E-54 T 29-03-2018 IPR030887 YaiO family, OMP domain AM460_RS14540 4ca5e0940cb5f44461415fc9eb8ee7bc 257 PIRSF PIRSF007027 1 257 2.5E-165 T 29-03-2018 IPR016504 Outer membrane protein YaiO AM460_RS12255 9675ae45136a897a184c15dedd7ec1c6 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 3.6E-69 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS12255 9675ae45136a897a184c15dedd7ec1c6 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM460_RS12255 9675ae45136a897a184c15dedd7ec1c6 323 SUPERFAMILY SSF53686 3 317 1.1E-97 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM460_RS12255 9675ae45136a897a184c15dedd7ec1c6 323 Gene3D G3DSA:3.40.50.1100 134 323 6.4E-59 T 29-03-2018 AM460_RS12255 9675ae45136a897a184c15dedd7ec1c6 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 1.2E-146 T 29-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM460_RS12255 9675ae45136a897a184c15dedd7ec1c6 323 Gene3D G3DSA:3.40.50.1100 20 133 8.1E-33 T 29-03-2018 AM460_RS12255 9675ae45136a897a184c15dedd7ec1c6 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 7.4E-138 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM460_RS13055 020560b82888a4e3011be184771ed528 322 Gene3D G3DSA:3.90.550.10 4 249 1.5E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS13055 020560b82888a4e3011be184771ed528 322 Pfam PF00535 Glycosyl transferase family 2 11 171 3.1E-34 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS13055 020560b82888a4e3011be184771ed528 322 SUPERFAMILY SSF53448 8 230 2.3E-38 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS13055 020560b82888a4e3011be184771ed528 322 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 322 61.013 T 29-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 AM460_RS20780 588d140976a764687f1632f402b3f571 187 SUPERFAMILY SSF159594 24 184 1.18E-28 T 29-03-2018 AM460_RS20780 588d140976a764687f1632f402b3f571 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 180 3.1E-40 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM460_RS20780 588d140976a764687f1632f402b3f571 187 Gene3D G3DSA:3.40.50.10610 12 187 1.9E-44 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM460_RS14155 de25a13cebe0140ca54ed3deaf4e6e8c 245 Pfam PF00977 Histidine biosynthesis protein 1 234 4.1E-75 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AM460_RS14155 de25a13cebe0140ca54ed3deaf4e6e8c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 7.5E-80 T 29-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM460_RS14155 de25a13cebe0140ca54ed3deaf4e6e8c 245 SUPERFAMILY SSF51366 1 242 1.48E-64 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM460_RS14155 de25a13cebe0140ca54ed3deaf4e6e8c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.678 T 29-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM460_RS14155 de25a13cebe0140ca54ed3deaf4e6e8c 245 Gene3D G3DSA:3.20.20.70 1 245 3.0E-51 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS15955 09f32bb505389cf772edcb19029341b1 119 SUPERFAMILY SSF140670 23 119 1.57E-53 T 29-03-2018 AM460_RS15955 09f32bb505389cf772edcb19029341b1 119 Pfam PF08986 Domain of unknown function (DUF1889) 1 119 1.1E-82 T 29-03-2018 IPR015079 Protein of unknown function DUF1889 AM460_RS02300 871bc0247fd44481964047fde32973d0 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 2.1E-15 T 29-03-2018 IPR013987 PhnA protein, N-terminal AM460_RS02300 871bc0247fd44481964047fde32973d0 111 Gene3D G3DSA:2.30.30.40 43 110 9.2E-38 T 29-03-2018 AM460_RS02300 871bc0247fd44481964047fde32973d0 111 Gene3D G3DSA:2.20.25.10 1 39 2.4E-16 T 29-03-2018 AM460_RS02300 871bc0247fd44481964047fde32973d0 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 7.3E-64 T 29-03-2018 IPR004624 PhnA protein AM460_RS02300 871bc0247fd44481964047fde32973d0 111 SUPERFAMILY SSF82057 39 110 7.78E-30 T 29-03-2018 AM460_RS02300 871bc0247fd44481964047fde32973d0 111 SUPERFAMILY SSF57783 1 36 4.76E-14 T 29-03-2018 AM460_RS02300 871bc0247fd44481964047fde32973d0 111 Pfam PF03831 PhnA domain 44 111 4.7E-35 T 29-03-2018 IPR013988 PhnA protein, C-terminal AM460_RS19215 1a9c490b0191e756e3d2aa15d4280b9e 628 SUPERFAMILY SSF52540 13 87 4.59E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19215 1a9c490b0191e756e3d2aa15d4280b9e 628 SUPERFAMILY SSF52540 300 543 4.59E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS19215 1a9c490b0191e756e3d2aa15d4280b9e 628 Gene3D G3DSA:3.40.50.300 2 598 7.7E-12 T 29-03-2018 AM460_RS06090 4112489002d42f0f4ca8b71acac466eb 352 Pfam PF02687 FtsX-like permease family 253 342 1.2E-5 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM460_RS06090 4112489002d42f0f4ca8b71acac466eb 352 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 47 352 6.9E-161 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AM460_RS06090 4112489002d42f0f4ca8b71acac466eb 352 PIRSF PIRSF003097 50 348 1.2E-109 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 SUPERFAMILY SSF52172 3 130 5.98E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 SMART SM00862 150 226 4.5E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 SMART SM00448 4 115 1.9E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 Pfam PF00072 Response regulator receiver domain 6 115 1.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.5E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 Gene3D G3DSA:1.10.10.10 122 228 8.7E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 SUPERFAMILY SSF46894 125 226 1.13E-24 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM460_RS00130 7c6e9e45c2d85db835b08ec99c5a6ed8 229 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-31 T 29-03-2018 AM460_RS11715 358ef9478a0f4b54d3036a5a62eb1427 379 PIRSF PIRSF004925 1 379 4.4E-121 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AM460_RS11715 358ef9478a0f4b54d3036a5a62eb1427 379 Pfam PF12832 MFS_1 like family 8 358 2.1E-44 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain AM460_RS11715 358ef9478a0f4b54d3036a5a62eb1427 379 Gene3D G3DSA:1.20.1250.20 192 377 1.4E-10 T 29-03-2018 AM460_RS11715 358ef9478a0f4b54d3036a5a62eb1427 379 SUPERFAMILY SSF103473 7 371 1.23E-35 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS11715 358ef9478a0f4b54d3036a5a62eb1427 379 Gene3D G3DSA:1.20.1250.20 4 191 8.1E-13 T 29-03-2018 AM460_RS11715 358ef9478a0f4b54d3036a5a62eb1427 379 TIGRFAM TIGR00902 2A0127: MFS transporter, phenyl propionate permease (PPP) family 1 379 1.1E-213 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AM460_RS06025 58c1eefaba81eab111b7f569cdd66832 195 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 169 3.1E-9 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS06025 58c1eefaba81eab111b7f569cdd66832 195 Gene3D G3DSA:3.90.470.20 99 177 3.3E-9 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS06025 58c1eefaba81eab111b7f569cdd66832 195 Gene3D G3DSA:3.90.470.20 20 98 3.4E-13 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS06025 58c1eefaba81eab111b7f569cdd66832 195 SUPERFAMILY SSF56214 87 180 1.83E-16 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS06025 58c1eefaba81eab111b7f569cdd66832 195 SUPERFAMILY SSF56214 29 79 5.23E-10 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 Pfam PF03466 LysR substrate binding domain 90 293 7.4E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 SUPERFAMILY SSF53850 88 294 1.45E-42 T 29-03-2018 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.5E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 Gene3D G3DSA:3.40.190.10 181 267 1.6E-17 T 29-03-2018 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 SUPERFAMILY SSF46785 11 112 1.55E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 Gene3D G3DSA:3.40.190.10 93 180 3.6E-22 T 29-03-2018 AM460_RS14625 dfe250171c4bd282ac72f4f323f83a55 316 Gene3D G3DSA:1.10.10.10 1 92 9.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS06925 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06925 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06925 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 29-03-2018 AM460_RS06925 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.3E-20 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06925 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06925 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS19470 ca956692f06dd296413ce2c3820ca97c 87 Gene3D G3DSA:2.160.20.20 1 85 1.3E-4 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS22285 65222ec89da5e3c9a0b445d5727bf68b 338 Pfam PF05971 Protein of unknown function (DUF890) 33 326 4.9E-154 T 29-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AM460_RS22285 65222ec89da5e3c9a0b445d5727bf68b 338 Gene3D G3DSA:3.40.50.150 68 326 1.3E-52 T 29-03-2018 AM460_RS22285 65222ec89da5e3c9a0b445d5727bf68b 338 SUPERFAMILY SSF53335 73 326 1.05E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS22285 65222ec89da5e3c9a0b445d5727bf68b 338 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 35 328 53.717 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM460_RS22285 65222ec89da5e3c9a0b445d5727bf68b 338 PIRSF PIRSF029038 25 338 1.8E-149 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF55200 90 179 3.92E-35 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 8.5E-38 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 4.1E-78 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 8.6E-31 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.10.20.80 10 86 2.2E-32 T 29-03-2018 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.82 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF54364 13 86 7.85E-29 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.30.110.10 87 180 1.3E-35 T 29-03-2018 AM460_RS16435 45916890555801d87d58e0e9bacc14fc 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 29-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AM460_RS16945 b2cdcea1d0c57fe6f0d34de0d283b551 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 2.7E-29 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS16945 b2cdcea1d0c57fe6f0d34de0d283b551 71 SUPERFAMILY SSF68989 1 71 1.12E-22 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS16945 b2cdcea1d0c57fe6f0d34de0d283b551 71 Gene3D G3DSA:1.20.1280.40 1 70 3.8E-29 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA AM460_RS15350 fe108219800e0013cbc84eb1e9457f34 126 Gene3D G3DSA:2.40.10.180 1 124 1.1E-24 T 29-03-2018 AM460_RS12575 8b1a31b7d7c7e3aae8a915e064049d3e 90 Pfam PF04606 Ogr/Delta-like zinc finger 8 53 1.8E-14 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type AM460_RS10310 a3b54139f672ab679beb92a579c1196a 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 6.1E-34 T 29-03-2018 IPR023376 YqcC-like domain AM460_RS10310 a3b54139f672ab679beb92a579c1196a 109 PIRSF PIRSF006257 1 108 3.6E-42 T 29-03-2018 IPR007384 Protein of unknown function UCP006257 AM460_RS10310 a3b54139f672ab679beb92a579c1196a 109 Gene3D G3DSA:1.20.1440.40 3 104 2.6E-38 T 29-03-2018 IPR023376 YqcC-like domain AM460_RS10310 a3b54139f672ab679beb92a579c1196a 109 SUPERFAMILY SSF158452 1 107 9.29E-37 T 29-03-2018 IPR023376 YqcC-like domain AM460_RS01665 ea9cc0e5fa8b1aaba3cc9b89078894df 212 Pfam PF04225 Opacity-associated protein A LysM-like domain 127 211 2.1E-34 T 29-03-2018 IPR007340 Opacity-associated protein A AM460_RS01665 ea9cc0e5fa8b1aaba3cc9b89078894df 212 Pfam PF08525 Opacity-associated protein A N-terminal motif 23 50 1.4E-8 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal AM460_RS20685 876dc3992dc25108fa8cc0e9b1bc8d16 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 29-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 AM460_RS20685 876dc3992dc25108fa8cc0e9b1bc8d16 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 8.8E-43 T 29-03-2018 IPR006214 Bax inhibitor 1-related AM460_RS17695 f2b9f02056ae5b5d04d679407359f894 76 Pfam PF10829 Protein of unknown function (DUF2554) 1 76 1.6E-51 T 29-03-2018 IPR020117 Uncharacterised protein family YncJ AM460_RS17695 f2b9f02056ae5b5d04d679407359f894 76 ProDom PD057831 YNCJ PRECURSOR SIGNAL PERIPLASMIC STY1461 1 76 4.0E-39 T 29-03-2018 IPR020117 Uncharacterised protein family YncJ AM460_RS23360 ee8fb38993cc94163320fd9e99d798b3 248 Pfam PF13098 Thioredoxin-like domain 115 241 6.3E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS23360 ee8fb38993cc94163320fd9e99d798b3 248 Gene3D G3DSA:3.40.30.10 104 247 2.1E-20 T 29-03-2018 AM460_RS23360 ee8fb38993cc94163320fd9e99d798b3 248 SUPERFAMILY SSF54423 19 78 7.98E-23 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM460_RS23360 ee8fb38993cc94163320fd9e99d798b3 248 Gene3D G3DSA:3.10.450.70 24 86 3.9E-27 T 29-03-2018 AM460_RS23360 ee8fb38993cc94163320fd9e99d798b3 248 SUPERFAMILY SSF52833 82 242 2.09E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS03690 1602d4d3d291b1665ced2b368c2bbb47 295 SUPERFAMILY SSF74650 26 292 6.22E-43 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS03690 1602d4d3d291b1665ced2b368c2bbb47 295 Pfam PF01263 Aldose 1-epimerase 28 212 6.7E-21 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM460_RS03690 1602d4d3d291b1665ced2b368c2bbb47 295 Gene3D G3DSA:2.70.98.10 25 294 2.9E-41 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS20320 87c725adb46f6bb696aeafe38b56dd1b 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 6 509 64.051 T 29-03-2018 IPR023704 Glucan biosynthesis protein G AM460_RS20320 87c725adb46f6bb696aeafe38b56dd1b 511 SUPERFAMILY SSF74650 23 393 2.98E-166 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS20320 87c725adb46f6bb696aeafe38b56dd1b 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 23 507 5.4E-201 T 29-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AM460_RS20320 87c725adb46f6bb696aeafe38b56dd1b 511 PIRSF PIRSF006281 1 511 3.6E-243 T 29-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AM460_RS20320 87c725adb46f6bb696aeafe38b56dd1b 511 Gene3D G3DSA:2.60.40.10 398 511 4.7E-45 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS20320 87c725adb46f6bb696aeafe38b56dd1b 511 Gene3D G3DSA:2.70.98.10 23 392 3.1E-169 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS20320 87c725adb46f6bb696aeafe38b56dd1b 511 SUPERFAMILY SSF81296 397 510 5.32E-34 T 29-03-2018 IPR014756 Immunoglobulin E-set AM460_RS13205 207f78a0af895c888342a8ec372d0e24 440 TIGRFAM TIGR00366 TIGR00366: TIGR00366 family protein 4 428 1.0E-225 T 29-03-2018 IPR006161 Conserved hypothetical protein CHP00336 AM460_RS13205 207f78a0af895c888342a8ec372d0e24 440 Pfam PF02667 Short chain fatty acid transporter 1 440 7.8E-231 T 29-03-2018 IPR006160 Short chain fatty acid transporter AtoE AM460_RS11090 9db114aa55c0a95970b40edeeb797944 217 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 14 197 4.1E-77 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AM460_RS11090 9db114aa55c0a95970b40edeeb797944 217 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 17 201 2.3E-62 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AM460_RS22115 048fbb254a8e6e6b23df767d85b71dff 208 SUPERFAMILY SSF47616 84 203 2.23E-28 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS22115 048fbb254a8e6e6b23df767d85b71dff 208 Gene3D G3DSA:1.20.1050.10 100 203 2.1E-27 T 29-03-2018 AM460_RS22115 048fbb254a8e6e6b23df767d85b71dff 208 Gene3D G3DSA:3.40.30.10 1 99 1.4E-27 T 29-03-2018 AM460_RS22115 048fbb254a8e6e6b23df767d85b71dff 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 197 3.4E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM460_RS22115 048fbb254a8e6e6b23df767d85b71dff 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 76 5.8E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS22115 048fbb254a8e6e6b23df767d85b71dff 208 SUPERFAMILY SSF52833 1 85 5.95E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS07245 2d10212c414dea72e3a8a92fa95b0c70 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 9.9E-179 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM460_RS07245 2d10212c414dea72e3a8a92fa95b0c70 489 SUPERFAMILY SSF50249 39 128 2.62E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS07245 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF00575 S1 RNA binding domain 38 109 1.5E-6 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM460_RS07245 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF10150 Ribonuclease E/G family 124 393 8.2E-102 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM460_RS07245 2d10212c414dea72e3a8a92fa95b0c70 489 SMART SM00316 37 122 1.2E-9 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM460_RS07245 2d10212c414dea72e3a8a92fa95b0c70 489 Gene3D G3DSA:2.40.50.140 32 127 5.7E-31 T 29-03-2018 AM460_RS08020 666de33aa20f7f434185c78de1f3558a 167 Pfam PF01863 Protein of unknown function DUF45 93 149 3.4E-11 T 29-03-2018 IPR002725 Protein of unknown function DUF45 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 Gene3D G3DSA:3.40.605.10 1 258 3.6E-75 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 486 3.9E-255 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 Pfam PF00171 Aldehyde dehydrogenase family 9 457 6.0E-113 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 58.316 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 Gene3D G3DSA:3.40.309.10 259 453 6.6E-41 T 29-03-2018 AM460_RS16280 c43fbc878edca08b50a1cdfd99c04fe0 492 SUPERFAMILY SSF53720 3 455 6.41E-119 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM460_RS13435 882b23dd4426ba4507b22747798f12cb 114 Pfam PF13989 YejG-like protein 4 108 6.9E-49 T 29-03-2018 IPR020489 Uncharacterised protein family YejG AM460_RS13435 882b23dd4426ba4507b22747798f12cb 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 2.0E-62 T 29-03-2018 IPR020489 Uncharacterised protein family YejG AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 29-03-2018 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 SUPERFAMILY SSF74731 3 117 2.62E-50 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 Pfam PF00453 Ribosomal protein L20 3 109 5.2E-49 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 Gene3D G3DSA:1.10.1900.20 55 116 2.4E-29 T 29-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS16445 fde9fa85e2bb35caa2b2d6f368888a0a 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-53 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS03995 71750ab58b7260161c7f9c5e29858c2e 407 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 399 5.9E-14 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 SUPERFAMILY SSF54211 2 162 3.95E-49 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 Gene3D G3DSA:3.30.230.10 3 164 1.8E-44 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 SUPERFAMILY SSF55060 164 281 6.98E-37 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.612 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 Gene3D G3DSA:3.30.70.890 165 283 3.6E-26 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 282 1.8E-124 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 Pfam PF08544 GHMP kinases C terminal 213 263 2.2E-6 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 Pfam PF00288 GHMP kinases N terminal domain 92 148 4.3E-11 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM460_RS19040 55cf509a72cd48c1b75a99c5d0227b73 283 PIRSF PIRSF010376 1 283 1.3E-84 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM460_RS19960 e454f8adfdbb16fee90be0163d3a14b7 273 SUPERFAMILY SSF52467 41 270 1.12E-74 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS19960 e454f8adfdbb16fee90be0163d3a14b7 273 Pfam PF02146 Sir2 family 48 221 4.4E-52 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 AM460_RS19960 e454f8adfdbb16fee90be0163d3a14b7 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 61.841 T 29-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AM460_RS19960 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.40.50.1220 32 272 3.7E-55 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS07335 b07f5eb7a050c52d00c36de294a6ba3f 212 Gene3D G3DSA:1.20.1050.10 89 209 8.0E-18 T 29-03-2018 AM460_RS07335 b07f5eb7a050c52d00c36de294a6ba3f 212 SUPERFAMILY SSF47616 82 208 1.42E-27 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS07335 b07f5eb7a050c52d00c36de294a6ba3f 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.6E-20 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS07335 b07f5eb7a050c52d00c36de294a6ba3f 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS07335 b07f5eb7a050c52d00c36de294a6ba3f 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 1.7E-13 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM460_RS07335 b07f5eb7a050c52d00c36de294a6ba3f 212 Gene3D G3DSA:3.40.30.10 1 88 2.7E-24 T 29-03-2018 AM460_RS02725 eb35e46217d198acfd8bec55d8dbfa10 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 258 5.1E-54 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM460_RS02725 eb35e46217d198acfd8bec55d8dbfa10 259 Gene3D G3DSA:1.10.12.10 204 259 1.1E-12 T 29-03-2018 IPR014748 Crontonase, C-terminal AM460_RS02725 eb35e46217d198acfd8bec55d8dbfa10 259 SUPERFAMILY SSF52096 1 258 5.12E-78 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS02725 eb35e46217d198acfd8bec55d8dbfa10 259 Gene3D G3DSA:3.90.226.10 1 202 2.4E-65 T 29-03-2018 AM460_RS27520 453b96d44e066218c009cb1c4c2c9470 225 Gene3D G3DSA:1.10.10.10 134 197 3.3E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27520 453b96d44e066218c009cb1c4c2c9470 225 Gene3D G3DSA:3.30.450.20 7 123 4.3E-10 T 29-03-2018 AM460_RS27520 453b96d44e066218c009cb1c4c2c9470 225 Pfam PF00989 PAS fold 18 114 3.7E-15 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM460_RS18910 42f6359933af7fb51cf5f459f72973da 200 SUPERFAMILY SSF48317 38 196 4.14E-9 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS18910 42f6359933af7fb51cf5f459f72973da 200 Gene3D G3DSA:1.20.144.10 41 200 8.4E-9 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS18910 42f6359933af7fb51cf5f459f72973da 200 Pfam PF14378 PAP2 superfamily 46 186 1.1E-11 T 29-03-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AM460_RS23220 95df53110b4b0bff22f15b71a45ee620 87 Gene3D G3DSA:3.30.70.260 5 87 1.1E-30 T 29-03-2018 AM460_RS23220 95df53110b4b0bff22f15b71a45ee620 87 SUPERFAMILY SSF117991 1 87 3.4E-31 T 29-03-2018 IPR027471 YbeD-like domain AM460_RS23220 95df53110b4b0bff22f15b71a45ee620 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.681 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 AM460_RS23220 95df53110b4b0bff22f15b71a45ee620 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 5.1E-29 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 AM460_RS21520 0ab40a3f33bb2a56300f57d32903ef53 331 Pfam PF00589 Phage integrase family 167 309 2.6E-17 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS21520 0ab40a3f33bb2a56300f57d32903ef53 331 Pfam PF14657 Arm DNA-binding domain 11 48 1.3E-5 T 29-03-2018 IPR028259 AP2-like integrase, N-terminal domain AM460_RS21520 0ab40a3f33bb2a56300f57d32903ef53 331 Gene3D G3DSA:1.10.150.130 55 167 3.7E-12 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS21520 0ab40a3f33bb2a56300f57d32903ef53 331 SUPERFAMILY SSF56349 60 318 1.97E-46 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS21520 0ab40a3f33bb2a56300f57d32903ef53 331 Gene3D G3DSA:1.10.443.10 168 321 1.2E-31 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS22995 fe842a7c864749441d1c94d4d75a4c43 426 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 416 1.0E-11 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS05710 8fc44c9db16ec74df8110c9e92a4a293 337 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 52 326 2.1E-136 T 29-03-2018 IPR005274 Inner membrane protein YhjD AM460_RS05710 8fc44c9db16ec74df8110c9e92a4a293 337 Pfam PF03631 Virulence factor BrkB 66 325 2.6E-52 T 29-03-2018 IPR017039 Virulence factor BrkB AM460_RS05710 8fc44c9db16ec74df8110c9e92a4a293 337 PIRSF PIRSF035875 35 329 1.1E-23 T 29-03-2018 IPR017039 Virulence factor BrkB AM460_RS19785 9470083dbe77c92acccc63ac177f8ced 233 Pfam PF06992 Replication protein P 1 231 6.3E-163 T 29-03-2018 IPR009731 Replication P GO:0006270 AM460_RS00420 c8235bcbf898b4d86393c2375329d11c 62 Gene3D G3DSA:1.10.260.40 1 59 2.4E-5 T 29-03-2018 AM460_RS00420 c8235bcbf898b4d86393c2375329d11c 62 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 2 56 8.4E-29 T 29-03-2018 IPR026365 Phage-associated protein, BcepMu gp16 family AM460_RS00420 c8235bcbf898b4d86393c2375329d11c 62 SUPERFAMILY SSF47413 3 56 4.38E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS21060 c8235bcbf898b4d86393c2375329d11c 62 Gene3D G3DSA:1.10.260.40 1 59 2.4E-5 T 29-03-2018 AM460_RS21060 c8235bcbf898b4d86393c2375329d11c 62 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 2 56 8.4E-29 T 29-03-2018 IPR026365 Phage-associated protein, BcepMu gp16 family AM460_RS21060 c8235bcbf898b4d86393c2375329d11c 62 SUPERFAMILY SSF47413 3 56 4.38E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS26925 1c7044bc08fc02df1a94aff0f33c2fae 214 Gene3D G3DSA:3.40.50.300 59 214 2.7E-5 T 29-03-2018 AM460_RS26925 1c7044bc08fc02df1a94aff0f33c2fae 214 Gene3D G3DSA:3.40.50.300 1 58 1.7E-5 T 29-03-2018 AM460_RS26925 1c7044bc08fc02df1a94aff0f33c2fae 214 Pfam PF09140 ATPase MipZ 50 108 9.6E-5 T 29-03-2018 IPR015223 ATPase MipZ AM460_RS26925 1c7044bc08fc02df1a94aff0f33c2fae 214 SUPERFAMILY SSF52540 1 205 3.33E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14210 6ca00c54ed8f1b5d8329051e1839dbf9 274 Gene3D G3DSA:3.40.50.720 2 269 1.5E-21 T 29-03-2018 AM460_RS14210 6ca00c54ed8f1b5d8329051e1839dbf9 274 SUPERFAMILY SSF51735 2 266 1.54E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS14210 6ca00c54ed8f1b5d8329051e1839dbf9 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 6.2E-10 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM460_RS24230 7ba247f6aae85322bcab997916430760 296 Pfam PF01040 UbiA prenyltransferase family 19 265 1.4E-59 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM460_RS24230 7ba247f6aae85322bcab997916430760 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 18.069 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM460_RS24230 7ba247f6aae85322bcab997916430760 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 1.3E-91 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM460_RS24230 7ba247f6aae85322bcab997916430760 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site AM460_RS27260 c4854e558600e9213ea27789592902bc 116 Pfam PF10784 Plasmid stability protein 5 75 6.9E-30 T 29-03-2018 IPR019720 Plasmid stability protein, StbB AM460_RS00265 f8bf667bbbc804c338bdd16b24da011e 198 Gene3D G3DSA:2.40.50.260 2 96 6.8E-5 T 29-03-2018 AM460_RS00265 f8bf667bbbc804c338bdd16b24da011e 198 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 1 198 5.1E-39 T 29-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM460_RS00265 f8bf667bbbc804c338bdd16b24da011e 198 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 109 1.2E-17 T 29-03-2018 IPR006531 Gp5 N-terminal AM460_RS20520 b133e57c3822850b1d63ac68425650e7 196 SUPERFAMILY SSF55469 12 192 5.89E-40 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS20520 b133e57c3822850b1d63ac68425650e7 196 Gene3D G3DSA:3.40.109.10 9 196 8.3E-31 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM460_RS20520 b133e57c3822850b1d63ac68425650e7 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.8 T 29-03-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 AM460_RS20520 b133e57c3822850b1d63ac68425650e7 196 Pfam PF00881 Nitroreductase family 18 158 5.1E-13 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM460_RS01390 b1f6b6951f1c49c8025652345bbe9493 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 6.6E-72 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM460_RS01390 b1f6b6951f1c49c8025652345bbe9493 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 5.2E-137 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AM460_RS13530 4fc58f4b6f73a19704cbcfbd8573b084 232 Gene3D G3DSA:2.60.120.10 7 149 2.2E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS13530 4fc58f4b6f73a19704cbcfbd8573b084 232 SUPERFAMILY SSF51206 31 139 1.44E-20 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM460_RS13530 4fc58f4b6f73a19704cbcfbd8573b084 232 Pfam PF00027 Cyclic nucleotide-binding domain 35 118 1.0E-12 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM460_RS13530 4fc58f4b6f73a19704cbcfbd8573b084 232 SMART SM00100 15 133 1.9E-17 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM460_RS13530 4fc58f4b6f73a19704cbcfbd8573b084 232 Gene3D G3DSA:1.10.10.10 150 228 6.3E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS20080 679c1ae1c1b72d8bbfa3789039d7d55e 340 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 332 32.786 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AM460_RS20080 679c1ae1c1b72d8bbfa3789039d7d55e 340 Gene3D G3DSA:3.30.160.60 303 337 2.7E-14 T 29-03-2018 AM460_RS20080 679c1ae1c1b72d8bbfa3789039d7d55e 340 Gene3D G3DSA:3.30.160.60 74 108 1.5E-17 T 29-03-2018 AM460_RS20080 679c1ae1c1b72d8bbfa3789039d7d55e 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 1.7E-158 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AM460_RS20080 679c1ae1c1b72d8bbfa3789039d7d55e 340 Pfam PF02618 YceG-like family 43 328 6.8E-78 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AM460_RS24890 9d58c0d19af7b7523388cced85861b0b 329 Pfam PF00248 Aldo/keto reductase family 16 309 3.9E-75 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24890 9d58c0d19af7b7523388cced85861b0b 329 SUPERFAMILY SSF51430 1 314 1.31E-102 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS24890 9d58c0d19af7b7523388cced85861b0b 329 Gene3D G3DSA:3.20.20.100 1 327 1.1E-102 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS03090 5868dbed3c7d8505f7ef36068b29e749 66 Gene3D G3DSA:3.10.20.30 1 66 1.7E-21 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS03090 5868dbed3c7d8505f7ef36068b29e749 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 3.6E-20 T 29-03-2018 IPR010035 ThiS, thiamine-biosynthesis AM460_RS03090 5868dbed3c7d8505f7ef36068b29e749 66 SUPERFAMILY SSF54285 1 66 5.23E-18 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM460_RS03090 5868dbed3c7d8505f7ef36068b29e749 66 Pfam PF02597 ThiS family 3 66 1.3E-16 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM460_RS13190 c75963cb80005307b10d7360030678e5 549 SUPERFAMILY SSF56601 52 225 4.14E-8 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS13190 c75963cb80005307b10d7360030678e5 549 Pfam PF10062 Predicted secreted protein (DUF2300) 412 531 3.8E-41 T 29-03-2018 IPR018748 Domain of unknown function DUF2300, secreted AM460_RS13190 c75963cb80005307b10d7360030678e5 549 Pfam PF10062 Predicted secreted protein (DUF2300) 84 205 1.2E-38 T 29-03-2018 IPR018748 Domain of unknown function DUF2300, secreted AM460_RS13190 c75963cb80005307b10d7360030678e5 549 Pfam PF08486 Stage II sporulation protein 313 375 4.7E-5 T 29-03-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal AM460_RS20110 5face2648d45b82fd6e556312636f655 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 6.3E-152 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM460_RS20110 5face2648d45b82fd6e556312636f655 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.365 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM460_RS20110 5face2648d45b82fd6e556312636f655 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.7E-29 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM460_RS20110 5face2648d45b82fd6e556312636f655 317 SUPERFAMILY SSF53901 3 317 2.81E-71 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS20110 5face2648d45b82fd6e556312636f655 317 Gene3D G3DSA:3.40.47.10 3 162 4.7E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS20110 5face2648d45b82fd6e556312636f655 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 1.2E-36 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM460_RS20110 5face2648d45b82fd6e556312636f655 317 Gene3D G3DSA:3.40.47.10 163 317 7.1E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 Gene3D G3DSA:3.10.20.30 1 106 3.8E-28 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 7.8E-30 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 SUPERFAMILY SSF46548 107 229 1.92E-31 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 Gene3D G3DSA:1.10.1060.10 107 242 6.6E-27 T 29-03-2018 AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.9E-99 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 SUPERFAMILY SSF54292 4 106 7.27E-29 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM460_RS01985 052ebfac67626ca0f2c49ed489e6a56a 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 7.1E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM460_RS07000 adb492cd1a01833702b8cf70e9ba85da 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.49 T 29-03-2018 IPR007456 Smg AM460_RS07000 adb492cd1a01833702b8cf70e9ba85da 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 4.2E-59 T 29-03-2018 IPR007456 Smg AM460_RS16530 6a87f7108408d309b71b42f74c5ede00 97 Gene3D G3DSA:3.30.70.20 38 86 1.6E-5 T 29-03-2018 AM460_RS16530 6a87f7108408d309b71b42f74c5ede00 97 SUPERFAMILY SSF54862 42 92 2.82E-8 T 29-03-2018 AM460_RS16530 6a87f7108408d309b71b42f74c5ede00 97 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM460_RS16530 6a87f7108408d309b71b42f74c5ede00 97 PIRSF PIRSF036548 3 97 2.3E-37 T 29-03-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 AM460_RS08915 24c8f06bafcc8a76eba300fdaa21e3da 86 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 32 77 3.5E-8 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM460_RS08915 24c8f06bafcc8a76eba300fdaa21e3da 86 Gene3D G3DSA:1.10.10.10 36 86 9.9E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS25085 bb1fb5efc508a24a8ebd242ab699aa5f 414 Gene3D G3DSA:1.20.1440.110 49 153 1.2E-23 T 29-03-2018 AM460_RS25085 bb1fb5efc508a24a8ebd242ab699aa5f 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 2.4E-221 T 29-03-2018 IPR010520 UPF0255 family AM460_RS25085 bb1fb5efc508a24a8ebd242ab699aa5f 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 61.306 T 29-03-2018 IPR010520 UPF0255 family AM460_RS25085 bb1fb5efc508a24a8ebd242ab699aa5f 414 Gene3D G3DSA:3.40.50.1820 154 414 3.9E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS25085 bb1fb5efc508a24a8ebd242ab699aa5f 414 SUPERFAMILY SSF53474 46 413 1.0E-54 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS11870 1b9483382b0ccf6c38dfd7c1f4d50b1d 455 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.339 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS11870 1b9483382b0ccf6c38dfd7c1f4d50b1d 455 Gene3D G3DSA:2.40.50.140 6 113 1.8E-10 T 29-03-2018 AM460_RS11870 1b9483382b0ccf6c38dfd7c1f4d50b1d 455 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 3.1E-32 T 29-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AM460_RS11870 1b9483382b0ccf6c38dfd7c1f4d50b1d 455 Pfam PF02601 Exonuclease VII, large subunit 126 439 9.9E-102 T 29-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AM460_RS11870 1b9483382b0ccf6c38dfd7c1f4d50b1d 455 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 5.8E-140 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM460_RS11870 1b9483382b0ccf6c38dfd7c1f4d50b1d 455 Gene3D G3DSA:3.40.50.261 114 428 0.017 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM460_RS10305 56d7a6bf84d08bd3ac4ef5437f38891f 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.827 T 29-03-2018 IPR009948 Syd GO:0009898 AM460_RS10305 56d7a6bf84d08bd3ac4ef5437f38891f 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 5.9E-72 T 29-03-2018 IPR009948 Syd GO:0009898 AM460_RS25645 55d090f42977f911c51165523c3987b0 198 SUPERFAMILY SSF49401 31 198 7.46E-10 T 29-03-2018 IPR008966 Adhesion domain AM460_RS25645 55d090f42977f911c51165523c3987b0 198 Gene3D G3DSA:2.60.40.1090 30 198 2.4E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25645 55d090f42977f911c51165523c3987b0 198 Pfam PF00419 Fimbrial protein 37 197 1.2E-6 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS23565 29808696b1fd27aaf546d13a32c38ee0 372 SUPERFAMILY SSF55931 4 369 5.04E-107 T 29-03-2018 AM460_RS23565 29808696b1fd27aaf546d13a32c38ee0 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 90.929 T 29-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM460_RS23565 29808696b1fd27aaf546d13a32c38ee0 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 9.5E-91 T 29-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM460_RS23565 29808696b1fd27aaf546d13a32c38ee0 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 296 2.3E-117 T 29-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM460_RS15615 10f3d0cd796f899b927ce99f98e7dcec 323 Gene3D G3DSA:3.40.50.150 78 323 9.3E-23 T 29-03-2018 AM460_RS15615 10f3d0cd796f899b927ce99f98e7dcec 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.1E-172 T 29-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AM460_RS15615 10f3d0cd796f899b927ce99f98e7dcec 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.882 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM460_RS15615 10f3d0cd796f899b927ce99f98e7dcec 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 6.6E-148 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM460_RS15615 10f3d0cd796f899b927ce99f98e7dcec 323 SUPERFAMILY SSF53335 91 323 1.04E-33 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 401 1.6E-16 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 300 24.337 T 29-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 SUPERFAMILY SSF56037 318 421 1.7E-31 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 SMART SM00977 356 427 1.7E-25 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 196 3.7E-54 T 29-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 SUPERFAMILY SSF52402 3 226 2.03E-66 T 29-03-2018 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 SUPERFAMILY SSF82829 227 312 9.68E-27 T 29-03-2018 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 Gene3D G3DSA:3.40.50.620 7 220 6.0E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 Pfam PF01171 PP-loop family 14 191 2.2E-62 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 Pfam PF11734 TilS substrate C-terminal domain 356 425 1.1E-25 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM460_RS25365 f835bba0fae71987b21470ddd96cfbc6 437 Pfam PF09179 TilS substrate binding domain 241 308 5.7E-20 T 29-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM460_RS02475 ea4b4a20ecb463d5b34971a46d780e8e 234 SUPERFAMILY SSF52540 3 224 1.3E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS02475 ea4b4a20ecb463d5b34971a46d780e8e 234 Pfam PF00005 ABC transporter 21 167 1.1E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02475 ea4b4a20ecb463d5b34971a46d780e8e 234 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02475 ea4b4a20ecb463d5b34971a46d780e8e 234 Gene3D G3DSA:3.40.50.300 1 231 1.8E-63 T 29-03-2018 AM460_RS02475 ea4b4a20ecb463d5b34971a46d780e8e 234 SMART SM00382 28 216 1.2E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS03965 041f55897a296bafa177a6060c808d38 222 Pfam PF00857 Isochorismatase family 20 213 2.0E-49 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS03965 041f55897a296bafa177a6060c808d38 222 Gene3D G3DSA:3.40.50.850 2 222 3.8E-59 T 29-03-2018 AM460_RS03965 041f55897a296bafa177a6060c808d38 222 SUPERFAMILY SSF52499 4 220 6.67E-61 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 Gene3D G3DSA:1.20.1560.10 10 333 1.2E-25 T 29-03-2018 AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 Gene3D G3DSA:3.40.50.300 334 586 1.7E-74 T 29-03-2018 AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 SUPERFAMILY SSF90123 17 334 2.88E-37 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 SUPERFAMILY SSF52540 339 581 2.81E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 Pfam PF00005 ABC transporter 361 510 1.9E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 SMART SM00382 370 562 7.5E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS14730 5b483a652c2ab66ee6ab0ceb8f4dbf8a 600 Pfam PF00664 ABC transporter transmembrane region 34 291 4.1E-7 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS07700 c0c40fb13f6c3ff021de9a14aba7feca 211 SUPERFAMILY SSF51735 2 200 4.95E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07700 c0c40fb13f6c3ff021de9a14aba7feca 211 SMART SM00859 3 103 0.0028 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS07700 c0c40fb13f6c3ff021de9a14aba7feca 211 Pfam PF13460 NAD(P)H-binding 8 190 3.6E-10 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS07700 c0c40fb13f6c3ff021de9a14aba7feca 211 Gene3D G3DSA:3.40.50.720 2 210 2.4E-20 T 29-03-2018 AM460_RS26915 752fefb9affc5341559fa02876b81a23 326 SUPERFAMILY SSF53067 159 317 3.53E-16 T 29-03-2018 AM460_RS26915 752fefb9affc5341559fa02876b81a23 326 Pfam PF06406 StbA protein 1 319 5.5E-159 T 29-03-2018 IPR009440 Plasmid segregation protein ParM/StbA AM460_RS26915 752fefb9affc5341559fa02876b81a23 326 Gene3D G3DSA:3.30.420.40 1 168 8.8E-31 T 29-03-2018 AM460_RS26915 752fefb9affc5341559fa02876b81a23 326 Gene3D G3DSA:3.30.420.40 169 304 2.2E-13 T 29-03-2018 AM460_RS26915 752fefb9affc5341559fa02876b81a23 326 SUPERFAMILY SSF53067 1 156 5.57E-47 T 29-03-2018 AM460_RS03425 341943ba3dbc93cd85c29c4a1f0318f6 308 PIRSF PIRSF005355 1 306 7.9E-100 T 29-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AM460_RS03425 341943ba3dbc93cd85c29c4a1f0318f6 308 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 17 300 3.0E-153 T 29-03-2018 AM460_RS03425 341943ba3dbc93cd85c29c4a1f0318f6 308 Pfam PF01040 UbiA prenyltransferase family 26 273 2.2E-37 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM460_RS03425 341943ba3dbc93cd85c29c4a1f0318f6 308 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 8 301 21.075 T 29-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM460_RS08295 2878d545c1a1a23857a4d84028199a19 262 PIRSF PIRSF006157 1 262 9.1E-94 T 29-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AM460_RS08295 2878d545c1a1a23857a4d84028199a19 262 SUPERFAMILY SSF53213 5 262 1.31E-90 T 29-03-2018 AM460_RS08295 2878d545c1a1a23857a4d84028199a19 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 257 1.2E-25 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM460_RS08295 2878d545c1a1a23857a4d84028199a19 262 Gene3D G3DSA:3.40.830.10 1 262 2.0E-83 T 29-03-2018 AM460_RS15240 ba217fc46379df4e64d09d60bbe74858 162 Pfam PF06114 IrrE N-terminal-like domain 32 157 9.3E-20 T 29-03-2018 IPR010359 IrrE N-terminal-like domain AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 SUPERFAMILY SSF51338 333 354 1.92E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 SUPERFAMILY SSF51338 22 85 1.92E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 SUPERFAMILY SSF51556 85 333 7.25E-27 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 Pfam PF01979 Amidohydrolase family 82 362 2.4E-28 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 Pfam PF13382 Adenine deaminase C-terminal domain 434 579 2.7E-56 T 29-03-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 Gene3D G3DSA:2.30.40.10 28 89 4.1E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 Hamap MF_01518 Adenine deaminase [ade]. 31 583 35.981 T 29-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 Gene3D G3DSA:3.20.20.140 90 210 1.0E-10 T 29-03-2018 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 TIGRFAM TIGR01178 ade: adenine deaminase 31 584 2.6E-252 T 29-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AM460_RS04865 14097eae0a053b6b53b46f9c553f2891 588 Gene3D G3DSA:2.30.40.10 231 364 8.0E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 SUPERFAMILY SSF56784 6 217 1.79E-47 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.4E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.4E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.4E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.4E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 1.3E-10 T 29-03-2018 IPR023214 HAD-like domain AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 1.3E-19 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM460_RS06430 50de4a9acc2a2c50cf28b01e4ddd6a12 222 Gene3D G3DSA:3.40.50.1000 4 216 3.9E-23 T 29-03-2018 IPR023214 HAD-like domain AM460_RS15050 d96e056f492fdca9b627adf2445da87a 471 Gene3D G3DSA:1.10.1420.10 224 451 0.0022 T 29-03-2018 AM460_RS15050 d96e056f492fdca9b627adf2445da87a 471 Pfam PF07196 Flagellin hook IN motif 128 184 1.1E-12 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AM460_RS15050 d96e056f492fdca9b627adf2445da87a 471 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 224 454 1.5E-57 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AM460_RS15050 d96e056f492fdca9b627adf2445da87a 471 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 9.4E-23 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AM460_RS21270 d208e8e31f143518b8384ad29a961797 230 Gene3D G3DSA:3.30.240.20 97 166 2.9E-19 T 29-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AM460_RS21270 d208e8e31f143518b8384ad29a961797 230 Pfam PF04239 Protein of unknown function (DUF421) 104 169 1.3E-15 T 29-03-2018 IPR007353 Protein of unknown function DUF421 AM460_RS17905 4153603500112e4c43a36aee223424dd 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.844 T 29-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AM460_RS17905 4153603500112e4c43a36aee223424dd 311 Gene3D G3DSA:3.40.50.620 6 245 1.4E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS17905 4153603500112e4c43a36aee223424dd 311 PIRSF PIRSF004976 1 273 3.6E-77 T 29-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AM460_RS17905 4153603500112e4c43a36aee223424dd 311 SUPERFAMILY SSF52402 17 235 2.72E-53 T 29-03-2018 AM460_RS17905 4153603500112e4c43a36aee223424dd 311 Pfam PF01171 PP-loop family 42 204 3.3E-13 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 SUPERFAMILY SSF56935 22 351 2.78E-80 T 29-03-2018 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 Gene3D G3DSA:2.40.160.10 32 351 1.0E-53 T 29-03-2018 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 234 251 1.6E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.6E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 1.6E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 262 281 1.6E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 1.6E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 1.6E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 306 322 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 Pfam PF00267 Gram-negative porin 27 351 5.6E-151 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 228 240 1.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 306 323 1.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS25075 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS23835 2890d1d530349014657037ad14e9d36f 667 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 149 2.2E-36 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS23835 2890d1d530349014657037ad14e9d36f 667 Gene3D G3DSA:2.30.110.20 2 149 7.5E-31 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS23835 2890d1d530349014657037ad14e9d36f 667 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 369 460 1.5E-11 T 29-03-2018 IPR018712 Domain of unknown function DUF2235 AM460_RS23835 2890d1d530349014657037ad14e9d36f 667 Pfam PF05638 Type VI secretion system effector, Hcp 6 134 2.7E-12 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS23835 2890d1d530349014657037ad14e9d36f 667 SUPERFAMILY SSF141452 5 148 9.42E-27 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM460_RS07510 8e9fca70277051eb4b503c63b7d1e731 92 Gene3D G3DSA:1.10.260.40 1 73 6.2E-12 T 29-03-2018 AM460_RS07510 8e9fca70277051eb4b503c63b7d1e731 92 SUPERFAMILY SSF47413 3 72 5.06E-29 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS07510 8e9fca70277051eb4b503c63b7d1e731 92 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 3.2E-35 T 29-03-2018 AM460_RS18750 6d050d76ca57f68cef0ee3de0f3416d8 823 Gene3D G3DSA:3.30.420.10 624 817 9.7E-16 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS18750 6d050d76ca57f68cef0ee3de0f3416d8 823 SUPERFAMILY SSF53098 642 817 5.82E-19 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS18750 6d050d76ca57f68cef0ee3de0f3416d8 823 Pfam PF16473 3' exoribonuclease, RNase T-like 642 813 5.6E-47 T 29-03-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain AM460_RS12970 bbd24c0aaaa5e43f08b01b5dc556f5d8 323 Pfam PF04389 Peptidase family M28 95 316 8.2E-25 T 29-03-2018 IPR007484 Peptidase M28 AM460_RS12970 bbd24c0aaaa5e43f08b01b5dc556f5d8 323 Gene3D G3DSA:3.40.630.10 32 323 2.5E-38 T 29-03-2018 AM460_RS12970 bbd24c0aaaa5e43f08b01b5dc556f5d8 323 SUPERFAMILY SSF53187 247 320 2.49E-44 T 29-03-2018 AM460_RS12970 bbd24c0aaaa5e43f08b01b5dc556f5d8 323 SUPERFAMILY SSF53187 38 217 2.49E-44 T 29-03-2018 AM460_RS12260 dbff7c9b90f1e95a740c4485693de230 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 6.9E-44 T 29-03-2018 AM460_RS12260 dbff7c9b90f1e95a740c4485693de230 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 29.292 T 29-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AM460_RS02805 dc2c874d2238d2b5ce4668687e9b483e 446 Hamap MF_01301 Maltoporin [lamB]. 4 446 44.865 T 29-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 AM460_RS02805 dc2c874d2238d2b5ce4668687e9b483e 446 Gene3D G3DSA:2.40.170.10 26 446 1.5E-161 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS02805 dc2c874d2238d2b5ce4668687e9b483e 446 SUPERFAMILY SSF56935 26 446 1.53E-153 T 29-03-2018 AM460_RS02805 dc2c874d2238d2b5ce4668687e9b483e 446 Pfam PF02264 LamB porin 28 446 2.4E-145 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS02805 dc2c874d2238d2b5ce4668687e9b483e 446 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 442 0.0 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM460_RS20035 a2436cefd91fa46ad44efecc42ad890c 274 Hamap MF_01604 Thiamine kinase [thiK]. 3 270 38.898 T 29-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AM460_RS20035 a2436cefd91fa46ad44efecc42ad890c 274 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 26 270 3.0E-101 T 29-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AM460_RS20035 a2436cefd91fa46ad44efecc42ad890c 274 Gene3D G3DSA:3.90.1200.10 43 272 8.9E-14 T 29-03-2018 AM460_RS20035 a2436cefd91fa46ad44efecc42ad890c 274 SUPERFAMILY SSF56112 15 268 1.01E-28 T 29-03-2018 IPR011009 Protein kinase-like domain AM460_RS20035 a2436cefd91fa46ad44efecc42ad890c 274 Pfam PF01636 Phosphotransferase enzyme family 25 222 4.1E-14 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 SUPERFAMILY SSF103473 245 457 5.75E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 SUPERFAMILY SSF103473 13 195 5.75E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 Pfam PF07690 Major Facilitator Superfamily 17 406 8.9E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 2.2E-9 T 29-03-2018 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 2.2E-9 T 29-03-2018 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 2.2E-9 T 29-03-2018 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 2.2E-9 T 29-03-2018 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 2.2E-9 T 29-03-2018 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 Gene3D G3DSA:1.20.1250.20 256 467 2.3E-21 T 29-03-2018 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 433 1.3E-79 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM460_RS04420 eb49e19e24881018378e60eb81a365e7 475 Gene3D G3DSA:1.20.1250.20 12 195 5.4E-27 T 29-03-2018 AM460_RS03525 c99947d21a1fb44906dc1d9055b5af56 327 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 1.1E-115 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AM460_RS03525 c99947d21a1fb44906dc1d9055b5af56 327 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 1.2E-186 T 29-03-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 AM460_RS03525 c99947d21a1fb44906dc1d9055b5af56 327 Gene3D G3DSA:1.20.1640.10 250 322 5.2E-5 T 29-03-2018 AM460_RS03525 c99947d21a1fb44906dc1d9055b5af56 327 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 41.586 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AM460_RS03525 c99947d21a1fb44906dc1d9055b5af56 327 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 327 2.0E-136 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AM460_RS09970 28759f6adf3f902534433743da6cb421 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS09970 28759f6adf3f902534433743da6cb421 156 SUPERFAMILY SSF54523 8 133 5.89E-7 T 29-03-2018 AM460_RS09970 28759f6adf3f902534433743da6cb421 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 2.6E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS09970 28759f6adf3f902534433743da6cb421 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 7.2E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM460_RS27695 b6257579f12459ce49aa3522168e056a 323 Gene3D G3DSA:3.90.1530.10 58 158 4.1E-6 T 29-03-2018 AM460_RS27695 b6257579f12459ce49aa3522168e056a 323 SMART SM00470 67 154 9.0E-9 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS27695 b6257579f12459ce49aa3522168e056a 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 63 242 8.8E-50 T 29-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AM460_RS27695 b6257579f12459ce49aa3522168e056a 323 Pfam PF02195 ParB-like nuclease domain 78 153 5.2E-11 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS27695 b6257579f12459ce49aa3522168e056a 323 SUPERFAMILY SSF110849 80 156 2.3E-10 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS12475 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 166 307 1.7E-28 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM460_RS12475 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 6 161 8.3E-35 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM460_RS00320 e9a8a641d697f5ab1e833c3c48d9f745 154 Pfam PF09646 Gp37 protein 10 152 3.0E-62 T 29-03-2018 IPR018602 Gp37/putative cytoplasmic protein STM4215 AM460_RS00320 e9a8a641d697f5ab1e833c3c48d9f745 154 SUPERFAMILY SSF143749 1 136 2.51E-55 T 29-03-2018 IPR009312 Minor tail protein U-like AM460_RS00320 e9a8a641d697f5ab1e833c3c48d9f745 154 Gene3D G3DSA:3.30.2000.10 1 135 1.2E-39 T 29-03-2018 AM460_RS21160 e9a8a641d697f5ab1e833c3c48d9f745 154 Pfam PF09646 Gp37 protein 10 152 3.0E-62 T 29-03-2018 IPR018602 Gp37/putative cytoplasmic protein STM4215 AM460_RS21160 e9a8a641d697f5ab1e833c3c48d9f745 154 SUPERFAMILY SSF143749 1 136 2.51E-55 T 29-03-2018 IPR009312 Minor tail protein U-like AM460_RS21160 e9a8a641d697f5ab1e833c3c48d9f745 154 Gene3D G3DSA:3.30.2000.10 1 135 1.2E-39 T 29-03-2018 AM460_RS12230 ca71771a1bfcaf95b2f49511bfc63cad 122 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 1 107 2.0E-58 T 29-03-2018 IPR035242 Protein of unknown function DUF5329 AM460_RS12230 ca71771a1bfcaf95b2f49511bfc63cad 122 Pfam PF17263 Family of unknown function (DUF5329) 24 115 1.4E-31 T 29-03-2018 IPR035242 Protein of unknown function DUF5329 AM460_RS10935 c003da0fb50adf0486e1f4625ded4e31 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 1.0E-73 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM460_RS10935 c003da0fb50adf0486e1f4625ded4e31 149 Pfam PF06610 L-alanine exporter 4 141 6.2E-67 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM460_RS10935 c003da0fb50adf0486e1f4625ded4e31 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 35.008 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM460_RS13775 893040bc1763b6cebb7898e3874ed147 378 SMART SM00327 214 373 6.0E-11 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS13775 893040bc1763b6cebb7898e3874ed147 378 SUPERFAMILY SSF53300 214 356 1.11E-20 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS13775 893040bc1763b6cebb7898e3874ed147 378 Pfam PF05762 VWA domain containing CoxE-like protein 151 372 2.9E-66 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like AM460_RS13775 893040bc1763b6cebb7898e3874ed147 378 Gene3D G3DSA:3.40.50.410 174 363 6.7E-17 T 29-03-2018 IPR002035 von Willebrand factor, type A AM460_RS15835 b89972f7b70346a6ffd6915ae7d9e200 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 27.11 T 29-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AM460_RS15835 b89972f7b70346a6ffd6915ae7d9e200 293 Gene3D G3DSA:3.30.2010.10 64 157 5.4E-21 T 29-03-2018 AM460_RS15835 b89972f7b70346a6ffd6915ae7d9e200 293 Pfam PF01435 Peptidase family M48 73 288 3.2E-39 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM460_RS09510 44ce07477b6cceaf6ab0598531ca8440 237 Gene3D G3DSA:3.40.50.300 51 222 4.0E-25 T 29-03-2018 AM460_RS09510 44ce07477b6cceaf6ab0598531ca8440 237 Gene3D G3DSA:3.40.50.300 11 50 0.0059 T 29-03-2018 AM460_RS09510 44ce07477b6cceaf6ab0598531ca8440 237 SUPERFAMILY SSF52540 33 219 5.51E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS28070 6e930b1b27d00709f9f296a6a8b41ab4 326 Pfam PF01609 Transposase DDE domain 138 312 4.2E-32 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM460_RS28070 6e930b1b27d00709f9f296a6a8b41ab4 326 Pfam PF05598 Transposase domain (DUF772) 51 124 3.6E-21 T 29-03-2018 IPR008490 Transposase InsH, N-terminal AM460_RS21085 320290ce60624e26fe3448c8288a88e2 242 Gene3D G3DSA:3.40.50.300 1 208 1.1E-4 T 29-03-2018 AM460_RS09335 1ec15bf8020179e500e9c92c944b4e14 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 235 2.2E-41 T 29-03-2018 IPR021307 Protein of unknown function DUF2884 AM460_RS24365 a4b4aba2ceaa5b92465e9b050af98628 439 Pfam PF05525 Branched-chain amino acid transport protein 8 429 7.2E-161 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM460_RS24365 a4b4aba2ceaa5b92465e9b050af98628 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.2E-165 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM460_RS01565 108cc7936765946bc5b79ea261151b2d 176 SUPERFAMILY SSF50324 4 174 9.81E-68 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM460_RS01565 108cc7936765946bc5b79ea261151b2d 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 8.8E-56 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM460_RS01565 108cc7936765946bc5b79ea261151b2d 176 Gene3D G3DSA:3.90.80.10 3 176 4.0E-54 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM460_RS01565 108cc7936765946bc5b79ea261151b2d 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.626 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM460_RS01565 108cc7936765946bc5b79ea261151b2d 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 Pfam PF13404 AsnC-type helix-turn-helix domain 2 43 1.4E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 SMART SM00344 2 111 1.2E-37 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 Gene3D G3DSA:3.30.70.920 54 148 2.7E-27 T 29-03-2018 AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 SUPERFAMILY SSF46785 1 61 1.79E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 7.3E-22 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 Gene3D G3DSA:1.10.10.10 1 50 2.3E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 SUPERFAMILY SSF54909 62 151 7.24E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.3E-10 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.3E-10 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS24130 fec718c80e00354a5a4a825b5ad0a9e8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.3E-10 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM460_RS15995 5ef899dfabc96cbfd6f74467c835b46e 212 PIRSF PIRSF006324 4 212 4.0E-65 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS15995 5ef899dfabc96cbfd6f74467c835b46e 212 Pfam PF01810 LysE type translocator 18 209 1.1E-58 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS14550 9783d1ee671487532514cea51be94487 398 SUPERFAMILY SSF53448 32 289 1.24E-43 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS14550 9783d1ee671487532514cea51be94487 398 Pfam PF00535 Glycosyl transferase family 2 34 200 4.5E-25 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM460_RS14550 9783d1ee671487532514cea51be94487 398 Gene3D G3DSA:3.90.550.10 18 275 4.6E-43 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS00735 6b0b64243c109c7e10cbbe9fdb3a6f58 383 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 383 1.2E-83 T 29-03-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit AM460_RS04215 ec292235ddae60fa45ea5034234d9311 461 PIRSF PIRSF006060 1 461 2.0E-65 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS04215 ec292235ddae60fa45ea5034234d9311 461 Pfam PF00324 Amino acid permease 16 428 2.6E-103 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS04215 ec292235ddae60fa45ea5034234d9311 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS04760 39d2acb6ef2417581d4de1592322e764 415 Pfam PF07676 WD40-like Beta Propeller Repeat 389 403 0.057 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM460_RS04760 39d2acb6ef2417581d4de1592322e764 415 Gene3D G3DSA:2.130.10.10 276 414 7.0E-17 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM460_RS04760 39d2acb6ef2417581d4de1592322e764 415 Pfam PF12566 Protein of unknown function (DUF3748) 75 190 1.5E-55 T 29-03-2018 IPR022223 Protein of unknown function DUF3748 AM460_RS04760 39d2acb6ef2417581d4de1592322e764 415 SUPERFAMILY SSF69304 280 414 3.01E-21 T 29-03-2018 AM460_RS04760 39d2acb6ef2417581d4de1592322e764 415 SUPERFAMILY SSF69304 29 158 3.01E-21 T 29-03-2018 AM460_RS04760 39d2acb6ef2417581d4de1592322e764 415 Gene3D G3DSA:2.140.10.30 5 128 3.9E-6 T 29-03-2018 AM460_RS27405 d4f74e9b8cba99b769ebbbe20c198c9c 185 Gene3D G3DSA:1.10.1710.10 33 184 1.1E-36 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS27405 d4f74e9b8cba99b769ebbbe20c198c9c 185 SUPERFAMILY SSF48657 33 181 1.14E-43 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS27405 d4f74e9b8cba99b769ebbbe20c198c9c 185 SMART SM00945 68 182 2.0E-29 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS27405 d4f74e9b8cba99b769ebbbe20c198c9c 185 Pfam PF12602 Fertility inhibition protein N terminal 1 62 2.4E-33 T 29-03-2018 IPR021065 Fertility inhibition protein FinO, N-terminal AM460_RS27405 d4f74e9b8cba99b769ebbbe20c198c9c 185 Pfam PF04352 ProQ/FINO family 73 176 2.3E-24 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS10050 490cbd03eade1acdf9dff3c4d707b845 142 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 3 113 3.9E-25 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AM460_RS10050 490cbd03eade1acdf9dff3c4d707b845 142 Pfam PF04965 Gene 25-like lysozyme 30 112 5.2E-12 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM460_RS10050 490cbd03eade1acdf9dff3c4d707b845 142 Gene3D G3DSA:3.10.450.40 1 130 3.9E-20 T 29-03-2018 AM460_RS10050 490cbd03eade1acdf9dff3c4d707b845 142 SUPERFAMILY SSF160719 29 117 2.48E-19 T 29-03-2018 AM460_RS07815 bcd3dfde5e0cbed4b3400fe4087b6c2f 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 7.5E-147 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AM460_RS07815 bcd3dfde5e0cbed4b3400fe4087b6c2f 523 SMART SM00858 22 92 5.2E-14 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS07815 bcd3dfde5e0cbed4b3400fe4087b6c2f 523 Pfam PF08666 SAF domain 22 91 2.6E-13 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS07815 bcd3dfde5e0cbed4b3400fe4087b6c2f 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 79.731 T 29-03-2018 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 AM460_RS07815 bcd3dfde5e0cbed4b3400fe4087b6c2f 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 4.7E-284 T 29-03-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 AM460_RS14395 84fdf25ea3e139433434fe0e444a38d3 352 Pfam PF01032 FecCD transport family 32 346 2.0E-83 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS14395 84fdf25ea3e139433434fe0e444a38d3 352 SUPERFAMILY SSF81345 13 346 8.5E-79 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS14395 84fdf25ea3e139433434fe0e444a38d3 352 Gene3D G3DSA:1.10.3470.10 16 352 1.6E-69 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS28125 019243788df4702569159e4aa58f9897 171 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 24 165 1.1E-32 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AM460_RS28125 019243788df4702569159e4aa58f9897 171 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 3 165 1.9E-39 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AM460_RS26335 05f7851ca87f395e62d0c9beaf31bbc8 198 Gene3D G3DSA:1.10.1710.10 35 196 2.1E-24 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS26335 05f7851ca87f395e62d0c9beaf31bbc8 198 SMART SM00945 77 194 6.7E-5 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS26335 05f7851ca87f395e62d0c9beaf31bbc8 198 SUPERFAMILY SSF48657 58 195 1.96E-34 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS26335 05f7851ca87f395e62d0c9beaf31bbc8 198 Pfam PF04352 ProQ/FINO family 82 184 3.3E-12 T 29-03-2018 IPR016103 ProQ/FinO domain AM460_RS17810 849f9bc806600b8abf7c52d81e87ce42 201 SUPERFAMILY SSF52218 1 199 5.7E-59 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS17810 849f9bc806600b8abf7c52d81e87ce42 201 Pfam PF02525 Flavodoxin-like fold 3 195 4.6E-47 T 29-03-2018 IPR003680 Flavodoxin-like fold AM460_RS17810 849f9bc806600b8abf7c52d81e87ce42 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.646 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM460_RS17810 849f9bc806600b8abf7c52d81e87ce42 201 Gene3D G3DSA:3.40.50.360 2 201 4.5E-41 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS07750 8063f16638467d5eaa70522e2cf508d2 158 Gene3D G3DSA:3.40.35.10 5 158 2.4E-56 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS07750 8063f16638467d5eaa70522e2cf508d2 158 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 155 2.0E-71 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM460_RS07750 8063f16638467d5eaa70522e2cf508d2 158 SUPERFAMILY SSF52728 5 156 1.7E-48 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS07750 8063f16638467d5eaa70522e2cf508d2 158 Pfam PF03830 PTS system sorbose subfamily IIB component 6 153 7.9E-49 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM460_RS04770 6bb27f9960fa9182d82beeeeb4bc8a5c 137 SUPERFAMILY SSF49764 30 137 4.88E-20 T 29-03-2018 IPR008978 HSP20-like chaperone AM460_RS04770 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.6E-23 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AM460_RS04770 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Gene3D G3DSA:2.60.40.790 5 137 1.3E-21 T 29-03-2018 IPR008978 HSP20-like chaperone AM460_RS04770 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 51.246 T 29-03-2018 IPR023728 Small heat shock protein IbpA AM460_RS08330 05397835251618755d36d09c85e6b600 493 Gene3D G3DSA:1.20.1600.10 12 436 2.5E-76 T 29-03-2018 AM460_RS08330 05397835251618755d36d09c85e6b600 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 443 9.7E-145 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AM460_RS08330 05397835251618755d36d09c85e6b600 493 SUPERFAMILY SSF56954 25 447 1.7E-99 T 29-03-2018 AM460_RS08330 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 232 427 2.0E-33 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS08330 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 27 209 3.6E-26 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM460_RS15235 a2dd672fdf6edb8a40655b3c97a830ee 201 Gene3D G3DSA:3.30.1520.10 3 128 6.1E-4 T 29-03-2018 IPR001683 Phox homologous domain GO:0035091 AM460_RS21640 356252a5135883fb94620492b21f21ef 104 Pfam PF10784 Plasmid stability protein 6 75 6.3E-29 T 29-03-2018 IPR019720 Plasmid stability protein, StbB AM460_RS07065 d38b071b42dcd8d62015f462b7286de6 252 SMART SM00382 37 224 1.8E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS07065 d38b071b42dcd8d62015f462b7286de6 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS07065 d38b071b42dcd8d62015f462b7286de6 252 PIRSF PIRSF039085 9 252 5.9E-108 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM460_RS07065 d38b071b42dcd8d62015f462b7286de6 252 Pfam PF00005 ABC transporter 28 176 1.2E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS07065 d38b071b42dcd8d62015f462b7286de6 252 Gene3D G3DSA:3.40.50.300 9 251 8.1E-76 T 29-03-2018 AM460_RS07065 d38b071b42dcd8d62015f462b7286de6 252 SUPERFAMILY SSF52540 12 246 1.33E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14600 ea301b7b5d70443d18c69342865da66f 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 246 2.2E-91 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS14600 ea301b7b5d70443d18c69342865da66f 247 Pfam PF02654 Cobalamin-5-phosphate synthase 9 244 2.1E-53 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS14600 ea301b7b5d70443d18c69342865da66f 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 48.584 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS19755 58535dca403e7bcc919cbcb26aff202f 96 Pfam PF07102 Protein of unknown function (DUF1364) 3 92 6.6E-43 T 29-03-2018 IPR010774 Protein of unknown function DUF1364 AM460_RS19755 58535dca403e7bcc919cbcb26aff202f 96 Gene3D G3DSA:3.30.50.20 19 92 2.7E-28 T 29-03-2018 AM460_RS17415 959bf24b3e70d9a6206ec4dc2d781a83 65 Pfam PF17073 Two-component-system connector protein 1 65 3.3E-47 T 29-03-2018 IPR031411 Two-component-system connector protein SafA AM460_RS21990 29a99a73c8fbca0837073871c144f116 238 SUPERFAMILY SSF161098 8 216 2.75E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS21990 29a99a73c8fbca0837073871c144f116 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 2.4E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS21990 29a99a73c8fbca0837073871c144f116 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 86 2.8E-12 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS21990 29a99a73c8fbca0837073871c144f116 238 Gene3D G3DSA:1.10.3720.10 2 236 5.1E-35 T 29-03-2018 AM460_RS17725 b379cde339a793d61221bf12ca705026 330 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 9 312 1.9E-111 T 29-03-2018 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 AM460_RS17725 b379cde339a793d61221bf12ca705026 330 Pfam PF03595 Voltage-dependent anion channel 8 305 4.5E-40 T 29-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 1.4E-68 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 173 189 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 93 108 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 56 73 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 215 231 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 241 259 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 16 32 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 125 139 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 PRINTS PR01714 Ferric iron reductase signature 197 212 1.2E-76 T 29-03-2018 IPR008090 Ferric iron reductase AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.4E-7 T 29-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AM460_RS00570 0b622dcc15f037bc721d2b6d815e545e 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 236 8.0E-30 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 Gene3D G3DSA:2.40.50.100 4 156 2.2E-21 T 29-03-2018 AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 SUPERFAMILY SSF51230 81 156 5.76E-26 T 29-03-2018 IPR011053 Single hybrid motif AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 2.0E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 2.0E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 2.0E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 Pfam PF00364 Biotin-requiring enzyme 83 155 9.2E-25 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM460_RS07195 36871dcfe1571efa43dd6a24b6f8caf0 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 1.4E-72 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM460_RS06035 033b1f67176ce0987a3a553d7c632b98 405 Gene3D G3DSA:1.20.1250.20 13 209 1.5E-18 T 29-03-2018 AM460_RS06035 033b1f67176ce0987a3a553d7c632b98 405 Gene3D G3DSA:1.20.1250.20 215 403 9.6E-18 T 29-03-2018 AM460_RS06035 033b1f67176ce0987a3a553d7c632b98 405 Pfam PF07690 Major Facilitator Superfamily 25 302 3.0E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS06035 033b1f67176ce0987a3a553d7c632b98 405 SUPERFAMILY SSF103473 17 395 1.96E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS06035 033b1f67176ce0987a3a553d7c632b98 405 Hamap MF_01118 UPF0226 membrane protein . 3 394 29.598 T 29-03-2018 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily AM460_RS19085 dfcf00fd75646b81bcde842dbc6540db 94 Gene3D G3DSA:1.10.10.60 7 88 6.9E-21 T 29-03-2018 AM460_RS19085 dfcf00fd75646b81bcde842dbc6540db 94 SUPERFAMILY SSF46689 1 92 9.68E-22 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS19085 dfcf00fd75646b81bcde842dbc6540db 94 Pfam PF01527 Transposase 4 72 1.7E-17 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS10775 f661d436d694dae36936b3e8ae627836 165 Pfam PF02464 Competence-damaged protein 8 160 2.0E-60 T 29-03-2018 IPR008136 CinA, C-terminal AM460_RS10775 f661d436d694dae36936b3e8ae627836 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 158 9.5E-64 T 29-03-2018 IPR008136 CinA, C-terminal AM460_RS10775 f661d436d694dae36936b3e8ae627836 165 SUPERFAMILY SSF142433 4 161 3.53E-59 T 29-03-2018 IPR008136 CinA, C-terminal AM460_RS10775 f661d436d694dae36936b3e8ae627836 165 Gene3D G3DSA:3.90.950.20 1 165 9.7E-61 T 29-03-2018 AM460_RS11375 c4b52d0adfc3a353acae9b84dddbcdf0 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 350 9.0E-176 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM460_RS11375 c4b52d0adfc3a353acae9b84dddbcdf0 356 PIRSF PIRSF001361 1 354 8.8E-165 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM460_RS11375 c4b52d0adfc3a353acae9b84dddbcdf0 356 Pfam PF00793 DAHP synthetase I family 39 340 1.0E-108 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM460_RS11375 c4b52d0adfc3a353acae9b84dddbcdf0 356 SUPERFAMILY SSF51569 8 346 1.1E-135 T 29-03-2018 AM460_RS11375 c4b52d0adfc3a353acae9b84dddbcdf0 356 Gene3D G3DSA:3.20.20.70 9 355 5.4E-130 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS05795 c78271e117743af19de16b7d3275247f 256 Pfam PF00005 ABC transporter 18 166 2.1E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS05795 c78271e117743af19de16b7d3275247f 256 SUPERFAMILY SSF52540 2 229 2.15E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS05795 c78271e117743af19de16b7d3275247f 256 SMART SM00382 26 215 4.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS05795 c78271e117743af19de16b7d3275247f 256 Gene3D G3DSA:3.40.50.300 1 234 1.1E-58 T 29-03-2018 AM460_RS05795 c78271e117743af19de16b7d3275247f 256 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS17240 767008ac98d49d50e80cb151aa590ea4 681 Gene3D G3DSA:1.10.1370.10 146 371 5.5E-41 T 29-03-2018 AM460_RS17240 767008ac98d49d50e80cb151aa590ea4 681 Gene3D G3DSA:1.10.1370.10 456 681 2.6E-54 T 29-03-2018 AM460_RS17240 767008ac98d49d50e80cb151aa590ea4 681 SUPERFAMILY SSF55486 5 679 7.33E-172 T 29-03-2018 AM460_RS17240 767008ac98d49d50e80cb151aa590ea4 681 Pfam PF01432 Peptidase family M3 230 678 3.8E-147 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM460_RS17240 767008ac98d49d50e80cb151aa590ea4 681 Gene3D G3DSA:1.20.1050.40 10 144 9.9E-36 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AM460_RS08710 a877b45cd5ab13c71ade9f179fbb0c9c 134 SUPERFAMILY SSF143744 2 132 1.26E-36 T 29-03-2018 AM460_RS08710 a877b45cd5ab13c71ade9f179fbb0c9c 134 Pfam PF03928 Haem-degrading 7 129 1.4E-32 T 29-03-2018 IPR005624 Haem-degrading AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 Pfam PF00271 Helicase conserved C-terminal domain 230 336 4.4E-27 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 SMART SM00490 255 336 4.9E-28 T 29-03-2018 IPR001650 Helicase, C-terminal AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 SUPERFAMILY SSF52540 72 350 6.87E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 Gene3D G3DSA:3.40.50.300 13 211 3.4E-55 T 29-03-2018 AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 Gene3D G3DSA:3.40.50.300 214 450 1.7E-41 T 29-03-2018 AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 SMART SM00487 22 219 6.9E-57 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 Pfam PF03880 DbpA RNA binding domain 384 454 1.8E-20 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 71.939 T 29-03-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 AM460_RS17910 3d47512980c06233f1809df6aff0e078 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 1.8E-43 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM460_RS14285 2d8a5bd05f1f6bbb9159e20e6f412826 63 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 1 63 3.0E-30 T 29-03-2018 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 PIRSF PIRSF015689 1 315 1.6E-136 T 29-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 Gene3D G3DSA:3.30.360.10 145 284 1.4E-67 T 29-03-2018 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 SUPERFAMILY SSF51735 1 155 4.49E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 1.1E-13 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 Gene3D G3DSA:3.40.50.720 1 144 1.1E-13 T 29-03-2018 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 316 145.708 T 29-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 SMART SM00859 5 123 1.7E-15 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 SUPERFAMILY SSF55347 131 284 8.5E-68 T 29-03-2018 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 308 2.4E-142 T 29-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM460_RS24580 176623507de234b955b5a9e1ebed82af 316 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 2.2E-63 T 29-03-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM460_RS20265 5af841e045682f26b4c0ce5b97d1f90f 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 8.0E-45 T 29-03-2018 IPR025730 Biofilm regulator BssS AM460_RS20265 5af841e045682f26b4c0ce5b97d1f90f 84 Pfam PF13991 BssS protein family 11 79 1.4E-31 T 29-03-2018 IPR025730 Biofilm regulator BssS AM460_RS12625 1de40c116bd26f06f23127c4d2cb796e 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 3.9E-47 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM460_RS12625 1de40c116bd26f06f23127c4d2cb796e 94 Gene3D G3DSA:3.30.70.860 15 94 2.7E-33 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain AM460_RS12625 1de40c116bd26f06f23127c4d2cb796e 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 1.1E-38 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM460_RS00425 444a338e4fcc673f6d53db97d61d340b 102 Pfam PF09339 IclR helix-turn-helix domain 12 57 1.0E-5 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM460_RS00425 444a338e4fcc673f6d53db97d61d340b 102 Gene3D G3DSA:1.10.10.10 3 82 2.0E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS00425 444a338e4fcc673f6d53db97d61d340b 102 SUPERFAMILY SSF46785 9 80 3.33E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS10210 5f5bea946680b3e8d429470944a5abd5 268 Gene3D G3DSA:3.40.50.720 3 266 2.7E-54 T 29-03-2018 AM460_RS10210 5f5bea946680b3e8d429470944a5abd5 268 Pfam PF00899 ThiF family 20 260 3.3E-37 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM460_RS10210 5f5bea946680b3e8d429470944a5abd5 268 SUPERFAMILY SSF69572 10 259 1.27E-63 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM460_RS19735 e0dd51c49177cf94528d33c7c227d336 105 Pfam PF16083 LydA holin phage, holin superfamily III 18 94 6.3E-22 T 29-03-2018 IPR032126 LydA-like holin AM460_RS05800 ba46fd4bc7a3d5c86e2b96b824111242 318 Pfam PF01032 FecCD transport family 6 313 9.0E-95 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS05800 ba46fd4bc7a3d5c86e2b96b824111242 318 SUPERFAMILY SSF81345 3 314 4.71E-85 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS05800 ba46fd4bc7a3d5c86e2b96b824111242 318 Gene3D G3DSA:1.10.3470.10 1 318 1.0E-67 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 7.2E-112 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 29-03-2018 IPR018215 ClpP, Ser active site AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.936 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 Gene3D G3DSA:3.90.226.10 15 207 8.9E-48 T 29-03-2018 AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 SUPERFAMILY SSF52096 23 206 1.77E-75 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 29-03-2018 IPR033135 ClpP, histidine active site AM460_RS24180 c80cda9efd4d78c152403bd0ab9e6143 207 Pfam PF00574 Clp protease 26 205 4.6E-89 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:2.40.50.100 254 292 6.0E-11 T 29-03-2018 AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:2.40.50.140 293 348 1.1E-8 T 29-03-2018 AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 SMART SM00382 28 211 2.8E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 Pfam PF00005 ABC transporter 20 161 2.7E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 SUPERFAMILY SSF50331 236 366 4.37E-32 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 Pfam PF08402 TOBE domain 283 355 3.2E-11 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:3.40.50.300 1 253 3.3E-70 T 29-03-2018 AM460_RS02810 599aa7bb9acb7c8383cd6e9a94258fbf 371 SUPERFAMILY SSF52540 4 243 3.64E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS08440 799e6a11692b29a261d5100260f22adf 245 Gene3D G3DSA:3.40.1130.10 34 244 6.6E-40 T 29-03-2018 AM460_RS08440 799e6a11692b29a261d5100260f22adf 245 SMART SM00563 67 182 2.0E-39 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS08440 799e6a11692b29a261d5100260f22adf 245 SUPERFAMILY SSF69593 2 240 6.15E-62 T 29-03-2018 AM460_RS08440 799e6a11692b29a261d5100260f22adf 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 8.7E-52 T 29-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AM460_RS08440 799e6a11692b29a261d5100260f22adf 245 Pfam PF01553 Acyltransferase 53 180 3.1E-32 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM460_RS02545 ebc96f78bd219e2312b969eda49400c1 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 9.8E-33 T 29-03-2018 IPR007436 Protein of unknown function DUF485 AM460_RS09465 cbf1dbed9e2f4cf423f6bcef3121cc7c 252 Gene3D G3DSA:3.30.2010.10 59 147 2.2E-19 T 29-03-2018 AM460_RS09465 cbf1dbed9e2f4cf423f6bcef3121cc7c 252 Pfam PF01435 Peptidase family M48 72 245 3.5E-26 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM460_RS20260 46aeaec8f464c962863c5da2c65b296e 81 Gene3D G3DSA:3.30.910.10 1 78 1.5E-32 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM460_RS20260 46aeaec8f464c962863c5da2c65b296e 81 SUPERFAMILY SSF54857 1 80 5.75E-29 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM460_RS20260 46aeaec8f464c962863c5da2c65b296e 81 Pfam PF06183 DinI-like family 14 78 9.1E-29 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM460_RS20920 127d0173cfd988c9ebeac149d149284b 259 Pfam PF02698 DUF218 domain 80 214 5.5E-28 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AM460_RS20920 127d0173cfd988c9ebeac149d149284b 259 Gene3D G3DSA:3.40.50.620 72 213 1.8E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS03655 770bdfbee1d0a69009cd1b7c26b3fe13 96 SMART SM00530 36 90 3.2E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS03655 770bdfbee1d0a69009cd1b7c26b3fe13 96 Gene3D G3DSA:1.10.260.40 35 96 9.6E-16 T 29-03-2018 AM460_RS03655 770bdfbee1d0a69009cd1b7c26b3fe13 96 SUPERFAMILY SSF47413 36 90 6.97E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS03655 770bdfbee1d0a69009cd1b7c26b3fe13 96 Pfam PF13560 Helix-turn-helix domain 37 81 2.3E-9 T 29-03-2018 AM460_RS19250 834a886452f5d1d54d4cf794b7201e62 356 Gene3D G3DSA:3.30.1180.20 184 356 1.7E-55 T 29-03-2018 AM460_RS19250 834a886452f5d1d54d4cf794b7201e62 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 3.2E-157 T 29-03-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 AM460_RS19250 834a886452f5d1d54d4cf794b7201e62 356 Pfam PF02733 Dak1 domain 18 351 1.5E-127 T 29-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM460_RS19250 834a886452f5d1d54d4cf794b7201e62 356 SUPERFAMILY SSF82549 10 355 5.23E-127 T 29-03-2018 AM460_RS19250 834a886452f5d1d54d4cf794b7201e62 356 Gene3D G3DSA:3.40.50.10440 11 183 8.8E-67 T 29-03-2018 AM460_RS26560 e572ff97fc33da7fef426b814faf7cc3 177 Gene3D G3DSA:3.40.50.1240 35 168 1.1E-10 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS26560 e572ff97fc33da7fef426b814faf7cc3 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 50 134 2.4E-5 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM460_RS26560 e572ff97fc33da7fef426b814faf7cc3 177 SUPERFAMILY SSF53254 50 131 1.13E-11 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM460_RS20205 60445697e7996f3697e7c40276c5977a 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 215 5.1E-36 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM460_RS20205 60445697e7996f3697e7c40276c5977a 219 SMART SM00858 95 157 1.5E-8 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS20205 60445697e7996f3697e7c40276c5977a 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 1.7E-36 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM460_RS20205 60445697e7996f3697e7c40276c5977a 219 Gene3D G3DSA:3.90.1210.10 90 170 2.3E-8 T 29-03-2018 AM460_RS02775 c7e46d2156e8123fa37a0ac3241359fb 122 Gene3D G3DSA:1.10.3830.10 7 119 1.3E-42 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM460_RS02775 c7e46d2156e8123fa37a0ac3241359fb 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 2.0E-35 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM460_RS02775 c7e46d2156e8123fa37a0ac3241359fb 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM460_RS05235 05a8cb4fdd78c308ead0d88fa54a151a 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 6.5E-240 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM460_RS05235 05a8cb4fdd78c308ead0d88fa54a151a 551 Pfam PF02652 L-lactate permease 16 542 1.8E-233 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM460_RS00835 9f17d4b8822a9a253d97030491cecfa7 167 SUPERFAMILY SSF49401 27 166 1.59E-23 T 29-03-2018 IPR008966 Adhesion domain AM460_RS00835 9f17d4b8822a9a253d97030491cecfa7 167 Gene3D G3DSA:2.60.40.1090 36 167 2.8E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17975 d0872fdca7764c1ba04cb966bae40205 85 Pfam PF10749 Protein of unknown function (DUF2534) 5 82 7.7E-40 T 29-03-2018 IPR019685 Protein of unknown function DUF2534 AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 Pfam PF13533 Biotin-lipoyl like 87 135 1.7E-15 T 29-03-2018 AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 Pfam PF13437 HlyD family secretion protein 198 301 2.0E-9 T 29-03-2018 AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 SUPERFAMILY SSF111369 79 313 1.44E-54 T 29-03-2018 AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 Gene3D G3DSA:2.40.50.100 39 119 5.0E-8 T 29-03-2018 AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 390 1.8E-78 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 Gene3D G3DSA:2.40.50.100 191 376 3.7E-5 T 29-03-2018 AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 413 55.003 T 29-03-2018 IPR022824 Multidrug resistance protein MdtA AM460_RS13990 ceffbd54b4867bcc60e89fe711825b01 415 Gene3D G3DSA:1.10.287.470 128 190 5.5E-12 T 29-03-2018 AM460_RS12645 e4932e67e66cc975be6f1ab375afc967 188 Gene3D G3DSA:2.60.40.1090 30 188 1.9E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12645 e4932e67e66cc975be6f1ab375afc967 188 Pfam PF00419 Fimbrial protein 34 187 4.9E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS12645 e4932e67e66cc975be6f1ab375afc967 188 SUPERFAMILY SSF49401 32 187 2.09E-27 T 29-03-2018 IPR008966 Adhesion domain AM460_RS07760 d9f664fd411e923ceca07e7e132ac262 384 Gene3D G3DSA:3.40.50.10490 223 373 3.7E-20 T 29-03-2018 AM460_RS07760 d9f664fd411e923ceca07e7e132ac262 384 Pfam PF01380 SIS domain 48 188 2.0E-30 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS07760 d9f664fd411e923ceca07e7e132ac262 384 Pfam PF01380 SIS domain 221 357 2.8E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS07760 d9f664fd411e923ceca07e7e132ac262 384 SUPERFAMILY SSF53697 15 373 9.22E-53 T 29-03-2018 AM460_RS07760 d9f664fd411e923ceca07e7e132ac262 384 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 382 1.9E-191 T 29-03-2018 IPR014180 Sugar isomerase, AgaS GO:0016861 AM460_RS07760 d9f664fd411e923ceca07e7e132ac262 384 Gene3D G3DSA:3.40.50.10490 13 193 3.7E-24 T 29-03-2018 AM460_RS00505 dc03074bd4f6f15c2ac9ab19041df871 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM460_RS00505 dc03074bd4f6f15c2ac9ab19041df871 260 SUPERFAMILY SSF51556 5 258 1.38E-78 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM460_RS00505 dc03074bd4f6f15c2ac9ab19041df871 260 Gene3D G3DSA:3.20.20.140 3 260 3.5E-76 T 29-03-2018 AM460_RS00505 dc03074bd4f6f15c2ac9ab19041df871 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM460_RS00505 dc03074bd4f6f15c2ac9ab19041df871 260 Pfam PF01026 TatD related DNase 6 257 4.1E-68 T 29-03-2018 IPR001130 TatD family GO:0016788 AM460_RS00505 dc03074bd4f6f15c2ac9ab19041df871 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM460_RS00505 dc03074bd4f6f15c2ac9ab19041df871 260 PIRSF PIRSF005902 2 260 8.6E-74 T 29-03-2018 IPR001130 TatD family GO:0016788 AM460_RS24550 42aa88b8937af3dbc7154b9a93528a6f 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 6.9E-22 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM460_RS15525 3f61e67ea63106b197ea2cce9d724078 308 Pfam PF00691 OmpA family 160 257 6.5E-12 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS15525 3f61e67ea63106b197ea2cce9d724078 308 Gene3D G3DSA:3.30.1330.60 107 295 1.5E-40 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS15525 3f61e67ea63106b197ea2cce9d724078 308 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 65 1.9E-19 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain AM460_RS15525 3f61e67ea63106b197ea2cce9d724078 308 SUPERFAMILY SSF103088 156 264 4.45E-18 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS26600 2eb8a88f9d876e0d9bff19ec065c4464 382 Gene3D G3DSA:3.40.50.300 134 375 2.0E-14 T 29-03-2018 AM460_RS26600 2eb8a88f9d876e0d9bff19ec065c4464 382 TIGRFAM TIGR02525 plasmid_TraJ: plasmid transfer ATPase TraJ 10 378 1.8E-176 T 29-03-2018 IPR013364 ATPase, plasmid transfer, TraJ AM460_RS26600 2eb8a88f9d876e0d9bff19ec065c4464 382 Gene3D G3DSA:3.30.450.90 19 133 2.4E-6 T 29-03-2018 AM460_RS26600 2eb8a88f9d876e0d9bff19ec065c4464 382 Pfam PF00437 Type II/IV secretion system protein 148 307 1.8E-33 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM460_RS26600 2eb8a88f9d876e0d9bff19ec065c4464 382 SUPERFAMILY SSF52540 5 372 3.88E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS17495 ce57e563d2a484e580c09854d14c2e25 45 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 45 2.0E-19 T 29-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 AM460_RS17495 ce57e563d2a484e580c09854d14c2e25 45 Pfam PF08136 30S ribosomal protein subunit S22 family 1 44 1.9E-31 T 29-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 AM460_RS22420 e82848397cf09bc3ac60ae83964f8d5c 302 SUPERFAMILY SSF142338 11 295 4.19E-87 T 29-03-2018 AM460_RS22420 e82848397cf09bc3ac60ae83964f8d5c 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 32.62 T 29-03-2018 IPR010119 Gluconeogenesis factor AM460_RS22420 e82848397cf09bc3ac60ae83964f8d5c 302 Gene3D G3DSA:3.40.50.10680 89 301 2.0E-43 T 29-03-2018 AM460_RS22420 e82848397cf09bc3ac60ae83964f8d5c 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 289 2.3E-79 T 29-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AM460_RS22420 e82848397cf09bc3ac60ae83964f8d5c 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 296 7.6E-105 T 29-03-2018 IPR010119 Gluconeogenesis factor AM460_RS13180 fac37c2ca98b472f5072137111ec0485 207 Gene3D G3DSA:3.90.1720.10 25 192 9.7E-12 T 29-03-2018 AM460_RS13180 fac37c2ca98b472f5072137111ec0485 207 Pfam PF06672 Protein of unknown function (DUF1175) 20 205 6.1E-77 T 29-03-2018 IPR009558 Protein of unknown function DUF1175 AM460_RS09150 73ee9ec5227c797e3d0466d5626cae1e 425 SUPERFAMILY SSF51905 164 332 1.04E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09150 73ee9ec5227c797e3d0466d5626cae1e 425 SUPERFAMILY SSF51905 1 221 2.92E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09150 73ee9ec5227c797e3d0466d5626cae1e 425 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 333 1.3E-112 T 29-03-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AM460_RS09150 73ee9ec5227c797e3d0466d5626cae1e 425 Gene3D G3DSA:3.50.50.60 1 191 2.1E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS09150 73ee9ec5227c797e3d0466d5626cae1e 425 Gene3D G3DSA:3.50.50.60 192 409 1.5E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS02215 15d773f1a4f0bfcdec00ef95cce1ba1b 216 PIRSF PIRSF020606 1 204 3.9E-82 T 29-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 AM460_RS02215 15d773f1a4f0bfcdec00ef95cce1ba1b 216 Pfam PF09997 Predicted membrane protein (DUF2238) 42 182 6.3E-56 T 29-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 AM460_RS09130 b01829eb4e15157045b092038d9b4c8f 122 Pfam PF01527 Transposase 3 74 1.6E-17 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS09130 b01829eb4e15157045b092038d9b4c8f 122 Gene3D G3DSA:1.10.10.60 9 90 1.2E-16 T 29-03-2018 AM460_RS09130 b01829eb4e15157045b092038d9b4c8f 122 SUPERFAMILY SSF46689 4 88 2.33E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS16545 cd8a0722dfdbce7685542fe991a028bc 254 Pfam PF01012 Electron transfer flavoprotein domain 28 206 2.4E-36 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS16545 cd8a0722dfdbce7685542fe991a028bc 254 PIRSF PIRSF000090 1 254 2.4E-62 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AM460_RS16545 cd8a0722dfdbce7685542fe991a028bc 254 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 29-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AM460_RS16545 cd8a0722dfdbce7685542fe991a028bc 254 SMART SM00893 21 211 3.0E-35 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM460_RS16545 cd8a0722dfdbce7685542fe991a028bc 254 SUPERFAMILY SSF52402 1 250 2.37E-54 T 29-03-2018 AM460_RS16545 cd8a0722dfdbce7685542fe991a028bc 254 Gene3D G3DSA:3.40.50.620 1 253 2.6E-49 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS03050 63aa8ddf4af749e9d7ad1d3a94a85406 196 Pfam PF04222 Protein of unknown function (DUF416) 5 192 1.5E-82 T 29-03-2018 IPR007338 Protein of unknown function DUF416 AM460_RS03050 63aa8ddf4af749e9d7ad1d3a94a85406 196 Gene3D G3DSA:1.20.1590.10 5 194 1.6E-76 T 29-03-2018 IPR023381 YP001051499.1-like domain AM460_RS15580 b84632a85cf5768df40176e1081d9e2a 130 Pfam PF06366 Flagellar protein FlhE 28 130 9.0E-38 T 29-03-2018 IPR009420 Flagellar protein FlhE AM460_RS23255 2a2c1be7510a6de80e54aec97992be29 262 Gene3D G3DSA:3.60.110.10 1 257 2.2E-58 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS23255 2a2c1be7510a6de80e54aec97992be29 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM460_RS23255 2a2c1be7510a6de80e54aec97992be29 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 245 4.4E-38 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS23255 2a2c1be7510a6de80e54aec97992be29 262 SUPERFAMILY SSF56317 1 254 7.19E-58 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS19110 19f57418b2ea06290cd5fa09027e44a7 885 PIRSF PIRSF035905 7 506 5.3E-57 T 29-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein AM460_RS19110 19f57418b2ea06290cd5fa09027e44a7 885 PIRSF PIRSF035905 506 885 8.4E-11 T 29-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein AM460_RS19110 19f57418b2ea06290cd5fa09027e44a7 885 Pfam PF10101 Predicted membrane protein (DUF2339) 483 878 2.9E-39 T 29-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane AM460_RS19110 19f57418b2ea06290cd5fa09027e44a7 885 Pfam PF10101 Predicted membrane protein (DUF2339) 135 517 2.1E-100 T 29-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane AM460_RS10960 4f563011ab0db0a71851097347585757 149 SMART SM00749 28 91 3.6E-9 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM460_RS10960 4f563011ab0db0a71851097347585757 149 Pfam PF01476 LysM domain 99 147 2.0E-14 T 29-03-2018 IPR018392 LysM domain AM460_RS10960 4f563011ab0db0a71851097347585757 149 Gene3D G3DSA:3.10.350.10 92 149 2.5E-16 T 29-03-2018 AM460_RS10960 4f563011ab0db0a71851097347585757 149 SMART SM00257 98 147 3.4E-14 T 29-03-2018 IPR018392 LysM domain AM460_RS10960 4f563011ab0db0a71851097347585757 149 Pfam PF04972 BON domain 24 89 5.6E-10 T 29-03-2018 IPR007055 BON domain AM460_RS10960 4f563011ab0db0a71851097347585757 149 SUPERFAMILY SSF54106 97 147 4.84E-8 T 29-03-2018 IPR018392 LysM domain AM460_RS17875 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 Gene3D G3DSA:3.40.50.620 2 144 5.2E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS17875 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 Pfam PF00582 Universal stress protein family 1 144 1.5E-29 T 29-03-2018 IPR006016 UspA GO:0006950 AM460_RS17875 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 105 117 7.3E-9 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS17875 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 2 20 7.3E-9 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS17875 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 122 144 7.3E-9 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS17875 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 SUPERFAMILY SSF52402 3 144 5.11E-31 T 29-03-2018 AM460_RS28040 e0b8cd3dd426714a0c3f390e3396ea86 181 SUPERFAMILY SSF52833 46 168 2.43E-11 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS28040 e0b8cd3dd426714a0c3f390e3396ea86 181 Gene3D G3DSA:3.40.30.10 36 181 1.5E-10 T 29-03-2018 AM460_RS28040 e0b8cd3dd426714a0c3f390e3396ea86 181 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 9 171 1.9E-63 T 29-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB AM460_RS28040 e0b8cd3dd426714a0c3f390e3396ea86 181 Pfam PF13728 F plasmid transfer operon protein 71 158 2.1E-12 T 29-03-2018 AM460_RS26035 7984ce2d5a17419bf134e2c8ab79d8e5 43 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 3 37 3.1E-11 T 29-03-2018 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 AM460_RS07990 865171d3867c818a7755445e3d5a408f 495 SMART SM00858 10 81 8.8E-18 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS07990 865171d3867c818a7755445e3d5a408f 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 494 5.5E-155 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AM460_RS07990 865171d3867c818a7755445e3d5a408f 495 Pfam PF08666 SAF domain 10 81 2.1E-16 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS22805 d21ff3caf4a8cd7e23bf430d957a3e98 348 Pfam PF05145 Transition state regulatory protein AbrB 29 339 6.1E-97 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AM460_RS22805 d21ff3caf4a8cd7e23bf430d957a3e98 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 183 339 6.9E-46 T 29-03-2018 IPR017516 AbrB duplication AM460_RS22805 d21ff3caf4a8cd7e23bf430d957a3e98 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 6 160 3.8E-41 T 29-03-2018 IPR017516 AbrB duplication AM460_RS22805 d21ff3caf4a8cd7e23bf430d957a3e98 348 PIRSF PIRSF038991 1 348 1.1E-99 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AM460_RS07475 c64901c38cc419fd95efac45ef8a5b3e 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS07475 c64901c38cc419fd95efac45ef8a5b3e 269 SMART SM00382 33 229 1.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS07475 c64901c38cc419fd95efac45ef8a5b3e 269 Pfam PF00005 ABC transporter 25 172 1.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS07475 c64901c38cc419fd95efac45ef8a5b3e 269 SUPERFAMILY SSF52540 8 237 4.35E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS07475 c64901c38cc419fd95efac45ef8a5b3e 269 Gene3D G3DSA:3.40.50.300 5 250 3.0E-61 T 29-03-2018 AM460_RS11355 ed23a0aa969ede81ec625e8585ed993c 160 PRINTS PR01021 OMPA domain signature 101 117 1.6E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS11355 ed23a0aa969ede81ec625e8585ed993c 160 PRINTS PR01021 OMPA domain signature 86 101 1.6E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS11355 ed23a0aa969ede81ec625e8585ed993c 160 PRINTS PR01021 OMPA domain signature 56 78 1.6E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM460_RS11355 ed23a0aa969ede81ec625e8585ed993c 160 SUPERFAMILY SSF103088 45 157 2.75E-28 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS11355 ed23a0aa969ede81ec625e8585ed993c 160 Pfam PF00691 OmpA family 55 151 3.7E-19 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS11355 ed23a0aa969ede81ec625e8585ed993c 160 Gene3D G3DSA:3.30.1330.60 23 160 4.6E-29 T 29-03-2018 IPR006665 OmpA-like domain AM460_RS18400 0e7bedb5a0abe5f0a21ba660d29f429b 208 PIRSF PIRSF011491 1 208 3.5E-96 T 29-03-2018 IPR016584 Methyltransferase VrtF-like AM460_RS18400 0e7bedb5a0abe5f0a21ba660d29f429b 208 SUPERFAMILY SSF53335 7 183 4.22E-15 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS18400 0e7bedb5a0abe5f0a21ba660d29f429b 208 Gene3D G3DSA:3.40.50.150 15 204 1.3E-10 T 29-03-2018 AM460_RS18400 0e7bedb5a0abe5f0a21ba660d29f429b 208 Pfam PF08242 Methyltransferase domain 44 141 4.8E-7 T 29-03-2018 IPR013217 Methyltransferase type 12 AM460_RS11750 ecad0a2b61665c6066ff039f2211b326 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 5.3E-72 T 29-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM460_RS11750 ecad0a2b61665c6066ff039f2211b326 128 Pfam PF01592 NifU-like N terminal domain 2 126 6.0E-58 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM460_RS11750 ecad0a2b61665c6066ff039f2211b326 128 SUPERFAMILY SSF82649 1 125 1.2E-49 T 29-03-2018 AM460_RS11750 ecad0a2b61665c6066ff039f2211b326 128 Gene3D G3DSA:3.90.1010.10 1 128 1.0E-53 T 29-03-2018 AM460_RS03460 0da58e887f0d36bd578530ea82271257 142 Pfam PF00582 Universal stress protein family 3 137 3.5E-19 T 29-03-2018 IPR006016 UspA GO:0006950 AM460_RS03460 0da58e887f0d36bd578530ea82271257 142 PIRSF PIRSF006276 1 141 7.3E-44 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS03460 0da58e887f0d36bd578530ea82271257 142 SUPERFAMILY SSF52402 3 138 1.05E-22 T 29-03-2018 AM460_RS03460 0da58e887f0d36bd578530ea82271257 142 Gene3D G3DSA:3.40.50.620 2 139 3.3E-16 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS04880 9ef20c884052175edb4f5e8910430354 107 SMART SM00530 51 105 0.0044 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS04880 9ef20c884052175edb4f5e8910430354 107 Pfam PF01381 Helix-turn-helix 52 96 2.6E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS04880 9ef20c884052175edb4f5e8910430354 107 SUPERFAMILY SSF47413 52 106 4.02E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS04880 9ef20c884052175edb4f5e8910430354 107 Gene3D G3DSA:1.10.260.40 45 106 6.5E-10 T 29-03-2018 AM460_RS20310 27f676681a6362b462ec3b4fcb0ed417 75 Pfam PF07119 Protein of unknown function (DUF1375) 9 69 1.3E-9 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 AM460_RS21185 38a792dcdb180495cb03ce36f6a1b6ef 111 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 82 6.3E-19 T 29-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM460_RS00295 38a792dcdb180495cb03ce36f6a1b6ef 111 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 82 6.3E-19 T 29-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM460_RS00100 13fe4258b37e32edda386faa50ec5fdf 21 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 21 2.2E-9 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM460_RS00100 13fe4258b37e32edda386faa50ec5fdf 21 Hamap MF_01907 thr operon leader peptide [thrL]. 1 21 11.934 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM460_RS00100 13fe4258b37e32edda386faa50ec5fdf 21 Pfam PF08254 Threonine leader peptide 1 21 5.0E-10 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM460_RS00135 d95d12290aaa87a91f47d25299cfb6ce 157 Pfam PF05981 CreA protein 24 155 2.9E-58 T 29-03-2018 IPR010292 Uncharacterised protein family CreA AM460_RS00135 d95d12290aaa87a91f47d25299cfb6ce 157 PIRSF PIRSF003174 1 157 1.2E-69 T 29-03-2018 IPR010292 Uncharacterised protein family CreA AM460_RS13515 3b78699f80efcbcf8f3831107a91badc 313 SUPERFAMILY SSF53613 7 305 4.05E-60 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13515 3b78699f80efcbcf8f3831107a91badc 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS13515 3b78699f80efcbcf8f3831107a91badc 313 Gene3D G3DSA:3.40.1190.20 1 311 1.3E-52 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS13515 3b78699f80efcbcf8f3831107a91badc 313 Pfam PF00294 pfkB family carbohydrate kinase 5 295 6.4E-63 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS13515 3b78699f80efcbcf8f3831107a91badc 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 40 64 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS21740 f07cfdbf6ca2a4fd97acffb1128e5e89 176 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 2.4E-49 T 29-03-2018 IPR006521 Tail protein I AM460_RS21740 f07cfdbf6ca2a4fd97acffb1128e5e89 176 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 142 5.5E-57 T 29-03-2018 IPR006521 Tail protein I AM460_RS08655 fab298a5409a2645a991fc3c7f960777 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 344 2.1E-53 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM460_RS08655 fab298a5409a2645a991fc3c7f960777 356 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 345 4.4E-95 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AM460_RS18525 01cc636e187524d96a8b3e2083be69f4 108 Pfam PF05135 Phage gp6-like head-tail connector protein 5 103 2.6E-9 T 29-03-2018 IPR021146 Phage gp6-like head-tail connector protein AM460_RS08790 a9d497e8631e5243b0efed5182b1400c 382 TIGRFAM TIGR01010 BexC_CtrB_KpsE: polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 24 382 7.7E-149 T 29-03-2018 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD GO:0009276|GO:0015542|GO:0015774 AM460_RS08790 a9d497e8631e5243b0efed5182b1400c 382 Gene3D G3DSA:3.30.1890.10 42 350 4.1E-18 T 29-03-2018 AM460_RS13805 628dbe908b9cd015bae3c51b36c15c78 1266 Pfam PF13569 Domain of unknown function (DUF4132) 1000 1183 1.3E-45 T 29-03-2018 IPR025406 Domain of unknown function DUF4132 AM460_RS13805 628dbe908b9cd015bae3c51b36c15c78 1266 Pfam PF05406 WGR domain 6 69 2.2E-17 T 29-03-2018 IPR008893 WGR domain AM460_RS13805 628dbe908b9cd015bae3c51b36c15c78 1266 Gene3D G3DSA:2.20.140.10 1 73 4.4E-16 T 29-03-2018 IPR008893 WGR domain AM460_RS13805 628dbe908b9cd015bae3c51b36c15c78 1266 SUPERFAMILY SSF142921 12 66 6.93E-9 T 29-03-2018 IPR008893 WGR domain AM460_RS13805 628dbe908b9cd015bae3c51b36c15c78 1266 SMART SM00773 1 71 5.8E-20 T 29-03-2018 IPR008893 WGR domain AM460_RS13525 0ba803777c30a2b5d8cf947a2d63b2ea 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 1.4E-66 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM460_RS13525 0ba803777c30a2b5d8cf947a2d63b2ea 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 5.8E-21 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM460_RS13525 0ba803777c30a2b5d8cf947a2d63b2ea 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 5.0E-156 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 Pfam PF03379 CcmB protein 3 217 4.9E-92 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 PIRSF PIRSF002764 1 220 2.2E-84 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 3.0E-72 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 193 216 3.0E-72 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 3.0E-72 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 156 175 3.0E-72 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 3.0E-72 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 3.0E-72 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM460_RS13335 a5cdfba447e7093ce9dc19120de5ade9 220 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 216 1.4E-95 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM460_RS15365 3a24318aea332a42796f392c973cde79 300 Gene3D G3DSA:2.40.50.260 16 110 8.3E-4 T 29-03-2018 AM460_RS15365 3a24318aea332a42796f392c973cde79 300 Pfam PF04717 Type VI secretion system, phage-baseplate injector 11 123 8.7E-29 T 29-03-2018 IPR006531 Gp5 N-terminal AM460_RS15365 3a24318aea332a42796f392c973cde79 300 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 14 161 1.4E-30 T 29-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM460_RS14700 f749e70f7e79feb535fd288f12c783e3 267 Gene3D G3DSA:3.40.50.1820 2 250 8.3E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS14700 f749e70f7e79feb535fd288f12c783e3 267 SUPERFAMILY SSF53474 9 246 4.59E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS14700 f749e70f7e79feb535fd288f12c783e3 267 Pfam PF00975 Thioesterase domain 20 249 1.3E-66 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM460_RS22160 91715b51333e3b2e75c34d944f7c6d7f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.0E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22160 91715b51333e3b2e75c34d944f7c6d7f 306 Gene3D G3DSA:1.10.3720.10 2 293 1.5E-46 T 29-03-2018 AM460_RS22160 91715b51333e3b2e75c34d944f7c6d7f 306 SUPERFAMILY SSF161098 91 288 3.27E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS14400 6990c5e3d7990d0f396664e734a6f97c 255 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS14400 6990c5e3d7990d0f396664e734a6f97c 255 SUPERFAMILY SSF52540 4 231 1.49E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14400 6990c5e3d7990d0f396664e734a6f97c 255 Gene3D G3DSA:3.40.50.300 2 242 3.2E-48 T 29-03-2018 AM460_RS14400 6990c5e3d7990d0f396664e734a6f97c 255 Pfam PF00005 ABC transporter 26 161 4.8E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS14400 6990c5e3d7990d0f396664e734a6f97c 255 SMART SM00382 29 210 3.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS15405 2473084eba2c702c6042196ab44df934 93 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 84 4.8E-14 T 29-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM460_RS15175 3cbd6ac099b12886508aa57b546cb83e 158 Gene3D G3DSA:1.10.3600.10 3 120 6.0E-30 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT AM460_RS15175 3cbd6ac099b12886508aa57b546cb83e 158 Pfam PF06254 Putative bacterial toxin ydaT 56 139 8.0E-18 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT AM460_RS16470 797574719fa8c1b2f1548397752b927d 326 Pfam PF01032 FecCD transport family 22 323 1.5E-86 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM460_RS16470 797574719fa8c1b2f1548397752b927d 326 SUPERFAMILY SSF81345 7 323 2.75E-84 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM460_RS16470 797574719fa8c1b2f1548397752b927d 326 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 32.374 T 29-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 AM460_RS16470 797574719fa8c1b2f1548397752b927d 326 Gene3D G3DSA:1.10.3470.10 1 326 3.6E-65 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS25105 d4688c985fd80f36049322a032c2df16 383 Pfam PF01139 tRNA-splicing ligase RtcB 33 102 2.4E-10 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM460_RS25105 d4688c985fd80f36049322a032c2df16 383 Pfam PF01139 tRNA-splicing ligase RtcB 113 376 4.0E-59 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM460_RS25105 d4688c985fd80f36049322a032c2df16 383 SUPERFAMILY SSF103365 9 376 7.59E-105 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM460_RS25105 d4688c985fd80f36049322a032c2df16 383 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 16 371 8.6E-187 T 29-03-2018 IPR017510 Release factor H-coupled RctB family protein AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 182.107 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 SUPERFAMILY SSF56059 123 312 4.86E-60 T 29-03-2018 AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.8E-46 T 29-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.2E-79 T 29-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 3.1E-140 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 SUPERFAMILY SSF52440 2 122 3.45E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 Gene3D G3DSA:3.30.1490.20 138 191 1.6E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 Gene3D G3DSA:3.40.50.20 2 129 8.8E-52 T 29-03-2018 AM460_RS09405 bb76f4d8334ca148b713b593d999f418 316 Gene3D G3DSA:3.30.470.20 192 300 2.4E-16 T 29-03-2018 AM460_RS07310 0d552860d03d7427ddfb58c6c723f3b7 132 PIRSF PIRSF006318 1 132 1.2E-51 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 AM460_RS07310 0d552860d03d7427ddfb58c6c723f3b7 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 5.2E-48 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 AM460_RS12185 fba85d05d695ab68cf36684c692a2b64 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 1.5E-90 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM460_RS12185 fba85d05d695ab68cf36684c692a2b64 299 Pfam PF04261 Dyp-type peroxidase family 5 295 3.4E-98 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM460_RS12185 fba85d05d695ab68cf36684c692a2b64 299 SUPERFAMILY SSF54909 1 296 1.45E-90 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM460_RS14310 cfe2bf1cf25348d1c013cd51a3bd6ff8 148 SUPERFAMILY SSF102712 73 114 6.02E-5 T 29-03-2018 AM460_RS14310 cfe2bf1cf25348d1c013cd51a3bd6ff8 148 Pfam PF04002 RadC-like JAB domain 28 147 1.1E-43 T 29-03-2018 IPR025657 RadC-like JAB domain AM460_RS14310 cfe2bf1cf25348d1c013cd51a3bd6ff8 148 Gene3D G3DSA:3.40.140.10 25 148 2.7E-48 T 29-03-2018 AM460_RS14310 cfe2bf1cf25348d1c013cd51a3bd6ff8 148 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 97 102 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM460_RS14310 cfe2bf1cf25348d1c013cd51a3bd6ff8 148 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 148 2.2E-44 T 29-03-2018 IPR001405 RadC protein AM460_RS01290 d07fc2799ec2746a4478856e207370f0 78 Pfam PF01527 Transposase 1 36 2.8E-7 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS01290 d07fc2799ec2746a4478856e207370f0 78 Gene3D G3DSA:1.10.10.10 1 46 7.3E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18345 d1ae0504bde6568c6fa4443dde28127f 293 SUPERFAMILY SSF89550 172 285 4.97E-52 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM460_RS18345 d1ae0504bde6568c6fa4443dde28127f 293 SUPERFAMILY SSF89550 9 90 4.97E-52 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM460_RS18345 d1ae0504bde6568c6fa4443dde28127f 293 SMART SM00481 10 77 1.9E-18 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM460_RS18345 d1ae0504bde6568c6fa4443dde28127f 293 Pfam PF02811 PHP domain 11 119 7.0E-7 T 29-03-2018 IPR004013 PHP domain GO:0003824 AM460_RS18345 d1ae0504bde6568c6fa4443dde28127f 293 Gene3D G3DSA:3.20.20.140 9 265 4.2E-39 T 29-03-2018 AM460_RS18250 5286d7f89f6585b0b1c8d58b83f22d0e 254 Pfam PF01569 PAP2 superfamily 77 232 4.0E-35 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS18250 5286d7f89f6585b0b1c8d58b83f22d0e 254 Gene3D G3DSA:1.20.144.10 5 250 2.3E-24 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS18250 5286d7f89f6585b0b1c8d58b83f22d0e 254 SMART SM00014 76 227 8.9E-49 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS18250 5286d7f89f6585b0b1c8d58b83f22d0e 254 SUPERFAMILY SSF48317 150 234 2.09E-32 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS18250 5286d7f89f6585b0b1c8d58b83f22d0e 254 SUPERFAMILY SSF48317 16 118 2.09E-32 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM460_RS12170 5e37111e4b94b21e8342a8c7d8becc28 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 1.9E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS12170 5e37111e4b94b21e8342a8c7d8becc28 141 SUPERFAMILY SSF55729 1 128 7.53E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS12170 5e37111e4b94b21e8342a8c7d8becc28 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 46.096 T 29-03-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 AM460_RS12170 5e37111e4b94b21e8342a8c7d8becc28 141 Gene3D G3DSA:3.40.630.30 1 141 1.3E-34 T 29-03-2018 AM460_RS14205 3471821bb71b62910945902a8e3ed8aa 84 SUPERFAMILY SSF143011 2 83 5.76E-27 T 29-03-2018 IPR035095 Toxin RelE-like domain AM460_RS14205 3471821bb71b62910945902a8e3ed8aa 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 8.7E-42 T 29-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AM460_RS14205 3471821bb71b62910945902a8e3ed8aa 84 Gene3D G3DSA:3.30.2310.20 1 84 2.4E-25 T 29-03-2018 AM460_RS14205 3471821bb71b62910945902a8e3ed8aa 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 6.1E-38 T 29-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AM460_RS15515 b655b9e362d93c5fd3fada70d38c158f 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 8.0E-111 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM460_RS15515 b655b9e362d93c5fd3fada70d38c158f 192 PIRSF PIRSF003159 1 181 9.8E-92 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM460_RS15515 b655b9e362d93c5fd3fada70d38c158f 192 SUPERFAMILY SSF160930 5 160 1.7E-64 T 29-03-2018 AM460_RS15515 b655b9e362d93c5fd3fada70d38c158f 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 4.3E-82 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM460_RS15515 b655b9e362d93c5fd3fada70d38c158f 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 45.439 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM460_RS24500 a852d44948913a0899dd03be9cf6a31d 406 SUPERFAMILY SSF90123 78 389 3.69E-6 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM460_RS24500 a852d44948913a0899dd03be9cf6a31d 406 Gene3D G3DSA:1.20.1560.10 296 392 2.9E-4 T 29-03-2018 AM460_RS24500 a852d44948913a0899dd03be9cf6a31d 406 Gene3D G3DSA:1.20.1560.10 70 284 1.9E-15 T 29-03-2018 AM460_RS24500 a852d44948913a0899dd03be9cf6a31d 406 Pfam PF05992 SbmA/BacA-like family 80 393 2.0E-166 T 29-03-2018 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 AM460_RS08105 62f2d69fa9da5f8e17e017a166210b15 207 Pfam PF03551 Transcriptional regulator PadR-like family 67 136 6.2E-16 T 29-03-2018 IPR005149 Transcription regulator PadR, N-terminal AM460_RS08105 62f2d69fa9da5f8e17e017a166210b15 207 SUPERFAMILY SSF46785 63 192 2.79E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08105 62f2d69fa9da5f8e17e017a166210b15 207 Gene3D G3DSA:1.10.10.10 51 181 5.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS13600 7083d83dd89700f47101a16278ccfc70 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 2.7E-47 T 29-03-2018 IPR007349 Domain of unknown function DUF418 AM460_RS21330 64a58eca27d75413bf8c579e479197dd 91 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 7 85 4.2E-10 T 29-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM460_RS08785 02c1616a39a6199b45bf17c3c053621c 559 Gene3D G3DSA:3.30.1950.10 22 157 1.1E-12 T 29-03-2018 AM460_RS08785 02c1616a39a6199b45bf17c3c053621c 559 Gene3D G3DSA:3.10.560.10 158 242 1.6E-7 T 29-03-2018 AM460_RS08785 02c1616a39a6199b45bf17c3c053621c 559 Gene3D G3DSA:3.10.560.10 243 325 0.05 T 29-03-2018 AM460_RS08785 02c1616a39a6199b45bf17c3c053621c 559 Gene3D G3DSA:3.10.560.10 327 457 3.1E-7 T 29-03-2018 AM460_RS08785 02c1616a39a6199b45bf17c3c053621c 559 Pfam PF02563 Polysaccharide biosynthesis/export protein 89 160 1.1E-13 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AM460_RS08785 02c1616a39a6199b45bf17c3c053621c 559 Pfam PF10531 SLBB domain 462 508 1.8E-6 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS08785 02c1616a39a6199b45bf17c3c053621c 559 Gene3D G3DSA:3.10.560.10 458 531 8.3E-8 T 29-03-2018 AM460_RS22655 95d6b9a5e688947f79739e307a1680a9 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 29-03-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 AM460_RS22655 95d6b9a5e688947f79739e307a1680a9 134 PIRSF PIRSF003230 1 134 5.3E-51 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM460_RS22655 95d6b9a5e688947f79739e307a1680a9 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.2E-50 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM460_RS22655 95d6b9a5e688947f79739e307a1680a9 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.4E-51 T 29-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AM460_RS22655 95d6b9a5e688947f79739e307a1680a9 134 Gene3D G3DSA:3.10.129.10 2 134 3.8E-37 T 29-03-2018 AM460_RS22655 95d6b9a5e688947f79739e307a1680a9 134 SUPERFAMILY SSF54637 4 133 2.24E-40 T 29-03-2018 IPR029069 HotDog domain AM460_RS22655 95d6b9a5e688947f79739e307a1680a9 134 Pfam PF03061 Thioesterase superfamily 20 103 7.1E-19 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM460_RS17395 e9ed4ef00c3dd24d6224b569a069d5ec 176 Gene3D G3DSA:2.60.40.1090 25 176 1.1E-34 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17395 e9ed4ef00c3dd24d6224b569a069d5ec 176 Pfam PF00419 Fimbrial protein 29 176 1.2E-17 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17395 e9ed4ef00c3dd24d6224b569a069d5ec 176 SUPERFAMILY SSF49401 33 176 7.95E-34 T 29-03-2018 IPR008966 Adhesion domain AM460_RS19655 fd0c08de075d16eab1f669438e30e71d 132 Pfam PF14000 DNA packaging protein FI 2 129 4.4E-59 T 29-03-2018 IPR025147 DNA packaging protein FI AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 SMART SM00271 1 66 7.9E-9 T 29-03-2018 IPR001623 DnaJ domain AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 160 6.7E-18 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 SUPERFAMILY SSF46565 1 75 9.03E-18 T 29-03-2018 IPR001623 DnaJ domain AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 25.025 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 SUPERFAMILY SSF47144 77 170 7.06E-26 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 1.7E-68 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 Gene3D G3DSA:1.20.1280.20 81 170 7.7E-25 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM460_RS11760 faf6c0209a96fd32e79e56c86c191611 171 Gene3D G3DSA:1.10.287.110 1 79 6.2E-10 T 29-03-2018 IPR001623 DnaJ domain AM460_RS17205 fd35d4d5bf55afa97376b5042f0dac30 339 Gene3D G3DSA:3.90.180.10 1 163 2.8E-50 T 29-03-2018 AM460_RS17205 fd35d4d5bf55afa97376b5042f0dac30 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM460_RS17205 fd35d4d5bf55afa97376b5042f0dac30 339 SUPERFAMILY SSF51735 137 304 2.22E-25 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS17205 fd35d4d5bf55afa97376b5042f0dac30 339 SUPERFAMILY SSF50129 1 170 5.02E-53 T 29-03-2018 IPR011032 GroES-like AM460_RS17205 fd35d4d5bf55afa97376b5042f0dac30 339 Pfam PF00107 Zinc-binding dehydrogenase 171 297 4.8E-19 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM460_RS17205 fd35d4d5bf55afa97376b5042f0dac30 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 4.3E-36 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM460_RS17205 fd35d4d5bf55afa97376b5042f0dac30 339 Gene3D G3DSA:3.40.50.720 164 282 3.7E-19 T 29-03-2018 AM460_RS13040 b3b16d9b7569defd46bab4ed47d14f06 550 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 550 43.007 T 29-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 AM460_RS13040 b3b16d9b7569defd46bab4ed47d14f06 550 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 4 237 6.6E-57 T 29-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AM460_RS07395 a80c776a6507cce3be4b94f201b314bb 309 SMART SM00729 23 247 4.9E-43 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM460_RS07395 a80c776a6507cce3be4b94f201b314bb 309 Gene3D G3DSA:3.20.20.70 12 290 8.8E-36 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS07395 a80c776a6507cce3be4b94f201b314bb 309 SUPERFAMILY SSF102114 13 254 1.31E-45 T 29-03-2018 AM460_RS07395 a80c776a6507cce3be4b94f201b314bb 309 Pfam PF04055 Radical SAM superfamily 43 202 1.1E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM460_RS07395 a80c776a6507cce3be4b94f201b314bb 309 Pfam PF16199 Radical_SAM C-terminal domain 208 283 3.1E-17 T 29-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AM460_RS07395 a80c776a6507cce3be4b94f201b314bb 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.9E-142 T 29-03-2018 IPR005911 Protein YhcC-like GO:0051536 AM460_RS06610 f6a1f1f52c858c17fad9a3ede31d8704 700 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 16 679 2.4E-278 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK AM460_RS06610 f6a1f1f52c858c17fad9a3ede31d8704 700 Pfam PF12805 FUSC-like inner membrane protein yccS 67 334 8.5E-73 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AM460_RS06610 f6a1f1f52c858c17fad9a3ede31d8704 700 Pfam PF13515 Fusaric acid resistance protein-like 381 502 7.2E-19 T 29-03-2018 AM460_RS18060 461685f6b6c01cf8b51b3637130c1aa6 351 Gene3D G3DSA:3.30.360.10 144 351 6.6E-30 T 29-03-2018 AM460_RS18060 461685f6b6c01cf8b51b3637130c1aa6 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 128 9.8E-32 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM460_RS18060 461685f6b6c01cf8b51b3637130c1aa6 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 249 9.0E-15 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM460_RS18060 461685f6b6c01cf8b51b3637130c1aa6 351 SUPERFAMILY SSF51735 5 158 5.77E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18060 461685f6b6c01cf8b51b3637130c1aa6 351 Gene3D G3DSA:3.40.50.720 2 143 3.8E-39 T 29-03-2018 AM460_RS18060 461685f6b6c01cf8b51b3637130c1aa6 351 SUPERFAMILY SSF55347 138 287 6.05E-23 T 29-03-2018 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 Gene3D G3DSA:2.40.50.140 15 154 4.4E-41 T 29-03-2018 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 505 2.4E-241 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.612 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 SUPERFAMILY SSF50249 13 155 9.3E-48 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 SUPERFAMILY SSF55681 162 502 2.87E-123 T 29-03-2018 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 PIRSF PIRSF039101 1 505 2.7E-210 T 29-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 Gene3D G3DSA:3.30.930.10 156 501 5.3E-106 T 29-03-2018 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 3.6E-84 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM460_RS02125 383f803ab89938b07fe84ced5452d813 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.1E-15 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM460_RS26040 e893bdcfc995db9c160db7cdc3d8c0a6 551 SUPERFAMILY SSF53850 121 546 4.89E-65 T 29-03-2018 AM460_RS26040 e893bdcfc995db9c160db7cdc3d8c0a6 551 Gene3D G3DSA:1.10.10.10 6 89 8.6E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26040 e893bdcfc995db9c160db7cdc3d8c0a6 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 5.7E-42 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AM460_RS26040 e893bdcfc995db9c160db7cdc3d8c0a6 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 305 9.5E-19 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM460_RS26040 e893bdcfc995db9c160db7cdc3d8c0a6 551 Gene3D G3DSA:3.40.190.10 256 377 2.9E-5 T 29-03-2018 AM460_RS26040 e893bdcfc995db9c160db7cdc3d8c0a6 551 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 551 66.639 T 29-03-2018 IPR023767 Transcriptional regulator SgrR AM460_RS26040 e893bdcfc995db9c160db7cdc3d8c0a6 551 Gene3D G3DSA:3.90.76.10 129 255 3.8E-21 T 29-03-2018 AM460_RS07410 af754e5d555537421435521e8f28951b 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 12 231 2.4E-87 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM460_RS07410 af754e5d555537421435521e8f28951b 242 SUPERFAMILY SSF53955 51 231 1.12E-62 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS07410 af754e5d555537421435521e8f28951b 242 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 233 44.075 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM460_RS07410 af754e5d555537421435521e8f28951b 242 Pfam PF00912 Transglycosylase 60 227 4.2E-52 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS07410 af754e5d555537421435521e8f28951b 242 Gene3D G3DSA:1.10.3810.10 47 241 1.1E-57 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM460_RS09375 186513da1a727bd1cc7f50fd1a7fd97c 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 4.5E-25 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM460_RS09375 186513da1a727bd1cc7f50fd1a7fd97c 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 4 91 4.3E-34 T 29-03-2018 IPR005228 Conserved hypothetical protein CHP00251 AM460_RS09375 186513da1a727bd1cc7f50fd1a7fd97c 96 SMART SM01152 7 83 3.1E-37 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM460_RS09375 186513da1a727bd1cc7f50fd1a7fd97c 96 Gene3D G3DSA:3.30.1200.10 1 96 2.5E-31 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM460_RS09375 186513da1a727bd1cc7f50fd1a7fd97c 96 SUPERFAMILY SSF69786 2 95 1.7E-32 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM460_RS09375 186513da1a727bd1cc7f50fd1a7fd97c 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.41 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM460_RS15905 4c553198e7900ab1cdf0390884503954 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.9E-132 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM460_RS15905 4c553198e7900ab1cdf0390884503954 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 3.4E-76 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM460_RS16290 032b8603bf63ad15c84038c52d228a09 322 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 318 6.9E-145 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM460_RS16290 032b8603bf63ad15c84038c52d228a09 322 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 320 3.3E-72 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AM460_RS16290 032b8603bf63ad15c84038c52d228a09 322 Gene3D G3DSA:3.40.630.10 40 299 1.7E-31 T 29-03-2018 AM460_RS16290 032b8603bf63ad15c84038c52d228a09 322 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 322 152.328 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM460_RS16290 032b8603bf63ad15c84038c52d228a09 322 PIRSF PIRSF017020 1 322 3.9E-118 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM460_RS16290 032b8603bf63ad15c84038c52d228a09 322 SUPERFAMILY SSF53187 1 319 4.96E-92 T 29-03-2018 AM460_RS05530 4f8d0265948b59c62afeaedf29ecc11e 402 Gene3D G3DSA:1.20.1250.20 197 402 1.1E-21 T 29-03-2018 AM460_RS05530 4f8d0265948b59c62afeaedf29ecc11e 402 Gene3D G3DSA:1.20.1250.20 6 196 6.4E-21 T 29-03-2018 AM460_RS05530 4f8d0265948b59c62afeaedf29ecc11e 402 SUPERFAMILY SSF103473 8 393 1.23E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS05530 4f8d0265948b59c62afeaedf29ecc11e 402 Pfam PF07690 Major Facilitator Superfamily 26 231 5.4E-19 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS05530 4f8d0265948b59c62afeaedf29ecc11e 402 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 383 1.3E-141 T 29-03-2018 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS04850 62edc94163f8cebbdebcfab0aac8f0d8 500 SMART SM00387 409 499 5.8E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04850 62edc94163f8cebbdebcfab0aac8f0d8 500 Pfam PF07730 Histidine kinase 305 370 1.4E-14 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM460_RS04850 62edc94163f8cebbdebcfab0aac8f0d8 500 Gene3D G3DSA:3.30.565.10 367 499 8.7E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04850 62edc94163f8cebbdebcfab0aac8f0d8 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 497 2.9E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04850 62edc94163f8cebbdebcfab0aac8f0d8 500 SUPERFAMILY SSF55874 385 496 3.01E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS04850 62edc94163f8cebbdebcfab0aac8f0d8 500 Pfam PF05231 MASE1 12 276 1.1E-13 T 29-03-2018 IPR007895 MASE1 AM460_RS24840 658a485de62cf10efd46b0c7e2f98ba7 239 Pfam PF02754 Cysteine-rich domain 133 216 3.2E-14 T 29-03-2018 IPR004017 Cysteine-rich domain AM460_RS24840 658a485de62cf10efd46b0c7e2f98ba7 239 Pfam PF02754 Cysteine-rich domain 3 84 2.9E-13 T 29-03-2018 IPR004017 Cysteine-rich domain AM460_RS08640 e64f0052fdd9a00e6cdc21822cdaa64c 449 Pfam PF01943 Polysaccharide biosynthesis protein 19 280 1.2E-9 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM460_RS25915 893c12d1c5aaac5930695f74306015f2 276 Pfam PF03799 Cell division protein FtsQ 130 247 2.2E-27 T 29-03-2018 IPR005548 Cell division protein FtsQ/DivIB AM460_RS25915 893c12d1c5aaac5930695f74306015f2 276 Pfam PF08478 POTRA domain, FtsQ-type 56 126 1.5E-19 T 29-03-2018 IPR013685 POTRA domain, FtsQ-type AM460_RS25915 893c12d1c5aaac5930695f74306015f2 276 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 25 255 26.08 T 29-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 Gene3D G3DSA:3.40.50.720 1 281 1.8E-111 T 29-03-2018 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 SUPERFAMILY SSF51735 5 281 9.05E-101 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 8.8E-54 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 3.8E-101 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 Gene3D G3DSA:1.10.1040.10 282 488 6.7E-64 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 SUPERFAMILY SSF48179 283 484 2.14E-64 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 3.3E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 3.3E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 3.3E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS13480 5d76c3b1eaab466ff7cf955598be8578 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 3.3E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM460_RS11735 09f9c8a98471672eae8a4f00a1503757 246 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.2E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM460_RS11735 09f9c8a98471672eae8a4f00a1503757 246 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 3.2E-97 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM460_RS11735 09f9c8a98471672eae8a4f00a1503757 246 Gene3D G3DSA:3.40.1280.10 1 165 1.1E-44 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS11735 09f9c8a98471672eae8a4f00a1503757 246 SUPERFAMILY SSF75217 4 164 8.5E-40 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS11735 09f9c8a98471672eae8a4f00a1503757 246 PIRSF PIRSF004808 1 245 9.7E-81 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM460_RS19145 2ea89639e96271428b02cf171eb99946 309 SUPERFAMILY SSF56349 23 292 4.41E-44 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM460_RS19145 2ea89639e96271428b02cf171eb99946 309 Gene3D G3DSA:1.10.443.10 122 301 5.4E-39 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS19145 2ea89639e96271428b02cf171eb99946 309 Pfam PF00589 Phage integrase family 126 291 5.4E-31 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM460_RS19145 2ea89639e96271428b02cf171eb99946 309 Gene3D G3DSA:1.10.150.130 16 121 3.1E-6 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS10215 2cde06cb79b74e5d579b7142da071887 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 144 1.3E-73 T 29-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AM460_RS10215 2cde06cb79b74e5d579b7142da071887 147 Gene3D G3DSA:3.90.1010.10 1 147 4.1E-45 T 29-03-2018 AM460_RS10215 2cde06cb79b74e5d579b7142da071887 147 Pfam PF02657 Fe-S metabolism associated domain 23 140 1.5E-38 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AM460_RS10215 2cde06cb79b74e5d579b7142da071887 147 SUPERFAMILY SSF82649 3 146 6.28E-44 T 29-03-2018 AM460_RS07675 2c78583efca34b5bfbb69d2a36d4f27d 174 Gene3D G3DSA:3.30.1050.10 27 140 1.6E-17 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS07675 2c78583efca34b5bfbb69d2a36d4f27d 174 PIRSF PIRSF025550 1 173 1.8E-83 T 29-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AM460_RS07675 2c78583efca34b5bfbb69d2a36d4f27d 174 SUPERFAMILY SSF55718 42 137 5.42E-22 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS07675 2c78583efca34b5bfbb69d2a36d4f27d 174 Pfam PF02036 SCP-2 sterol transfer family 45 133 1.4E-17 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS06695 cdf06494685a14dbfd79312fd952724e 119 SUPERFAMILY SSF75169 1 119 6.8E-35 T 29-03-2018 IPR027396 DsrEFH-like AM460_RS06695 cdf06494685a14dbfd79312fd952724e 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 9.1E-46 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF AM460_RS06695 cdf06494685a14dbfd79312fd952724e 119 Gene3D G3DSA:3.40.1260.10 1 119 4.4E-19 T 29-03-2018 AM460_RS06695 cdf06494685a14dbfd79312fd952724e 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 35.708 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF AM460_RS06695 cdf06494685a14dbfd79312fd952724e 119 Pfam PF02635 DsrE/DsrF-like family 2 119 4.0E-23 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM460_RS23475 d1b0497e25c781e7e5c5ed0418dadfde 72 SUPERFAMILY SSF160582 3 70 1.29E-24 T 29-03-2018 AM460_RS23475 d1b0497e25c781e7e5c5ed0418dadfde 72 Pfam PF03621 MbtH-like protein 4 54 7.7E-22 T 29-03-2018 IPR005153 MbtH-like protein AM460_RS23475 d1b0497e25c781e7e5c5ed0418dadfde 72 SMART SM00923 5 55 3.4E-24 T 29-03-2018 IPR005153 MbtH-like protein AM460_RS23475 d1b0497e25c781e7e5c5ed0418dadfde 72 Gene3D G3DSA:3.90.820.10 4 63 4.3E-25 T 29-03-2018 AM460_RS07490 7097b3957489f4ad7bcaece8194d216e 211 Pfam PF05494 MlaC protein 33 198 2.7E-53 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM460_RS07490 7097b3957489f4ad7bcaece8194d216e 211 Gene3D G3DSA:3.10.450.50 74 172 1.6E-22 T 29-03-2018 AM460_RS07490 7097b3957489f4ad7bcaece8194d216e 211 Gene3D G3DSA:3.10.450.50 26 73 3.4E-5 T 29-03-2018 AM460_RS07490 7097b3957489f4ad7bcaece8194d216e 211 PIRSF PIRSF004649 1 211 3.5E-63 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM460_RS01630 9d6fb40bfe2d23d847bfe783e5d17e90 126 Gene3D G3DSA:1.10.10.10 1 126 5.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01630 9d6fb40bfe2d23d847bfe783e5d17e90 126 Pfam PF01638 HxlR-like helix-turn-helix 29 115 6.2E-32 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type AM460_RS01630 9d6fb40bfe2d23d847bfe783e5d17e90 126 SUPERFAMILY SSF46785 13 118 2.25E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02410 a00221322a304638c49be819a0d55c01 326 Gene3D G3DSA:1.10.3470.10 48 323 4.7E-30 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS02410 a00221322a304638c49be819a0d55c01 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 8.5E-48 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS08335 b18f416701102b3c46e36034fc406489 209 Pfam PF00293 NUDIX domain 59 179 1.4E-11 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM460_RS08335 b18f416701102b3c46e36034fc406489 209 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM460_RS08335 b18f416701102b3c46e36034fc406489 209 SUPERFAMILY SSF55811 6 208 1.14E-50 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM460_RS08335 b18f416701102b3c46e36034fc406489 209 Gene3D G3DSA:3.90.79.10 1 209 1.6E-44 T 29-03-2018 AM460_RS08335 b18f416701102b3c46e36034fc406489 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.6E-85 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM460_RS16730 23db845a29625eb2569f304a2be74552 418 SUPERFAMILY SSF51126 39 394 8.47E-11 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM460_RS16730 23db845a29625eb2569f304a2be74552 418 Pfam PF03212 Pertactin 330 403 3.0E-5 T 29-03-2018 IPR004899 Pertactin, central region AM460_RS16730 23db845a29625eb2569f304a2be74552 418 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 99 159 8.3E-21 T 29-03-2018 IPR030930 Adhesin of bacterial autotransporter system AM460_RS21885 3cfca27767229b6aaa0738a6149bd45a 106 Gene3D G3DSA:3.30.1390.10 13 105 5.5E-38 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM460_RS21885 3cfca27767229b6aaa0738a6149bd45a 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.8E-34 T 29-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AM460_RS21885 3cfca27767229b6aaa0738a6149bd45a 106 SUPERFAMILY SSF54736 22 105 1.99E-33 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM460_RS21885 3cfca27767229b6aaa0738a6149bd45a 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 101 28.512 T 29-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AM460_RS20335 3cdd9fd701872874e17f7376d0ec69f7 385 Pfam PF01757 Acyltransferase family 10 356 1.2E-41 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM460_RS20335 3cdd9fd701872874e17f7376d0ec69f7 385 Gene3D G3DSA:1.20.1070.10 15 262 2.0E-4 T 29-03-2018 AM460_RS20335 3cdd9fd701872874e17f7376d0ec69f7 385 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 2 374 38.991 T 29-03-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 AM460_RS27270 632e6743c3ca2125d5dfdcfbbed5ba68 150 SUPERFAMILY SSF51161 8 147 2.77E-30 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS27270 632e6743c3ca2125d5dfdcfbbed5ba68 150 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 29 60 8.3E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS27270 632e6743c3ca2125d5dfdcfbbed5ba68 150 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 63 76 0.11 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS27270 632e6743c3ca2125d5dfdcfbbed5ba68 150 Gene3D G3DSA:2.160.10.10 8 150 1.5E-31 T 29-03-2018 AM460_RS05140 23f62189933d3b70ac03020a9c9976a0 421 Pfam PF04932 O-Antigen ligase 205 355 9.2E-10 T 29-03-2018 IPR007016 O-antigen ligase-related AM460_RS20395 b07b7621bf0dacaa0a4d31da4051618d 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 2.0E-80 T 29-03-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AM460_RS20395 b07b7621bf0dacaa0a4d31da4051618d 277 Gene3D G3DSA:3.40.50.10070 44 210 6.7E-18 T 29-03-2018 AM460_RS19875 23ece579f939e0f0363d9ecdb0857a2f 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 3.9E-242 T 29-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM460_RS19875 23ece579f939e0f0363d9ecdb0857a2f 416 Gene3D G3DSA:3.40.718.10 10 416 8.8E-136 T 29-03-2018 AM460_RS19875 23ece579f939e0f0363d9ecdb0857a2f 416 SMART SM01329 28 412 1.9E-182 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM460_RS19875 23ece579f939e0f0363d9ecdb0857a2f 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM460_RS19875 23ece579f939e0f0363d9ecdb0857a2f 416 SUPERFAMILY SSF53659 3 416 6.34E-151 T 29-03-2018 AM460_RS19875 23ece579f939e0f0363d9ecdb0857a2f 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 3.9E-118 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 SUPERFAMILY SSF57825 101 151 1.7E-15 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.847 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 Gene3D G3DSA:2.30.30.20 102 150 9.0E-19 T 29-03-2018 AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 1.7E-73 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 Gene3D G3DSA:3.30.70.140 5 97 1.3E-34 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 2.2E-18 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.3E-30 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 9.0E-48 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM460_RS01475 3b4798139750e07d544a7cf29d8b335c 153 SUPERFAMILY SSF54893 2 100 8.24E-36 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM460_RS22055 c72a2e1ee2eb49ed2e97c069924100f1 95 Pfam PF07214 Protein of unknown function (DUF1418) 1 92 1.5E-38 T 29-03-2018 IPR010815 Protein of unknown function DUF1418 AM460_RS01835 1a57bb4e9510d192b7cfdbeb63f0fd04 232 Gene3D G3DSA:1.20.120.330 12 148 2.3E-4 T 29-03-2018 AM460_RS01835 1a57bb4e9510d192b7cfdbeb63f0fd04 232 Pfam PF04012 PspA/IM30 family 2 232 3.4E-57 T 29-03-2018 IPR007157 PspA/IM30 AM460_RS26555 2fa04e773951f3a7a3c206179d78f239 400 Pfam PF13729 F plasmid transfer operon, TraF, protein 50 318 2.7E-69 T 29-03-2018 IPR032811 Putative conjugal transfer protein TraF-related AM460_RS26555 2fa04e773951f3a7a3c206179d78f239 400 Gene3D G3DSA:2.40.160.60 22 397 9.1E-32 T 29-03-2018 AM460_RS22760 fb3c4f1d49a541d71f3cd2d33a6fbaf1 436 PIRSF PIRSF006066 14 436 2.5E-122 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS22760 fb3c4f1d49a541d71f3cd2d33a6fbaf1 436 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 31 435 2.5E-117 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS22760 fb3c4f1d49a541d71f3cd2d33a6fbaf1 436 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 22 431 1.9E-106 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM460_RS18065 48d3f052960594030790bbd5fc51cdd3 262 Gene3D G3DSA:3.20.20.150 1 262 2.0E-44 T 29-03-2018 AM460_RS18065 48d3f052960594030790bbd5fc51cdd3 262 SUPERFAMILY SSF51658 1 259 2.63E-52 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS18065 48d3f052960594030790bbd5fc51cdd3 262 Pfam PF01261 Xylose isomerase-like TIM barrel 19 219 3.4E-27 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM460_RS04805 14cc7c3a30d651857f5c0fbe80b7a9e9 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 12 71 1.0E-29 T 29-03-2018 IPR020264 Uncharacterised protein family YidG AM460_RS04805 14cc7c3a30d651857f5c0fbe80b7a9e9 120 Pfam PF02656 Domain of unknown function (DUF202) 12 65 5.7E-10 T 29-03-2018 IPR003807 Domain of unknown function DUF202 AM460_RS02335 e9b4bd624201bb6de300d08c93b4128d 194 SUPERFAMILY SSF159709 13 193 3.01E-58 T 29-03-2018 AM460_RS02335 e9b4bd624201bb6de300d08c93b4128d 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 2.7E-61 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM460_RS02335 e9b4bd624201bb6de300d08c93b4128d 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 2.1E-62 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM460_RS02335 e9b4bd624201bb6de300d08c93b4128d 194 PIRSF PIRSF020680 1 194 1.3E-66 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM460_RS25965 049383c87ab3f6e97f9a4884f97c116f 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.698 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM460_RS25965 049383c87ab3f6e97f9a4884f97c116f 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 1.1E-28 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM460_RS25965 049383c87ab3f6e97f9a4884f97c116f 121 Pfam PF04999 Cell division protein FtsL 25 119 1.8E-35 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM460_RS05700 bea990e2d8ca2e4092d484f072f9ce32 686 Pfam PF05170 AsmA family 1 582 7.9E-186 T 29-03-2018 IPR007844 AsmA AM460_RS01115 743578a70923800aa1360bd377a50659 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.4E-38 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS15850 50742b438fde18c9298f5c246d366197 79 Pfam PF13996 YobH-like protein 2 71 1.7E-38 T 29-03-2018 IPR025611 YobH-like protein AM460_RS04825 22907842064db6456ba1905c883dbdc9 32 Pfam PF08049 IlvB leader peptide 1 32 4.7E-19 T 29-03-2018 IPR012566 IlvB leader peptide AM460_RS19615 846f7a09d550687411bd03e8105f5c55 109 Pfam PF05939 Phage minor tail protein 2 108 1.6E-36 T 29-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail AM460_RS06030 38287e7e3713486eb3f4a3877b3d34e4 349 Pfam PF01594 AI-2E family transporter 14 328 3.6E-82 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AM460_RS24310 478f869f6e3f661505fb82a869376081 179 Gene3D G3DSA:2.60.40.1620 43 175 3.7E-54 T 29-03-2018 IPR021658 Domain of unknown function DUF3251 AM460_RS24310 478f869f6e3f661505fb82a869376081 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 176 4.3E-79 T 29-03-2018 IPR021658 Domain of unknown function DUF3251 AM460_RS09490 e18eb4e18adee3325e2cdbf73973f5cd 462 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 372 455 3.5E-12 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS09490 e18eb4e18adee3325e2cdbf73973f5cd 462 Pfam PF02378 Phosphotransferase system, EIIC 20 277 1.3E-22 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS09490 e18eb4e18adee3325e2cdbf73973f5cd 462 SUPERFAMILY SSF52794 369 459 1.96E-22 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM460_RS09490 e18eb4e18adee3325e2cdbf73973f5cd 462 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 343 5.5E-144 T 29-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM460_RS09490 e18eb4e18adee3325e2cdbf73973f5cd 462 Gene3D G3DSA:3.40.50.2300 357 462 1.6E-19 T 29-03-2018 AM460_RS18700 4e0ff0a93b22d7e38a52196b260aebe6 320 Pfam PF13730 Helix-turn-helix domain 25 71 1.6E-6 T 29-03-2018 AM460_RS18700 4e0ff0a93b22d7e38a52196b260aebe6 320 Gene3D G3DSA:1.10.10.10 1 114 1.7E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS02440 3f79669575d394493c33874e7f07d408 683 Pfam PF04632 Fusaric acid resistance protein family 36 536 2.3E-31 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM460_RS23345 ba13364ddcd3ee684303191720b2848a 142 Gene3D G3DSA:3.40.50.620 2 142 3.6E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS23345 ba13364ddcd3ee684303191720b2848a 142 SUPERFAMILY SSF52402 2 142 3.68E-27 T 29-03-2018 AM460_RS23345 ba13364ddcd3ee684303191720b2848a 142 Pfam PF00582 Universal stress protein family 1 142 1.7E-27 T 29-03-2018 IPR006016 UspA GO:0006950 AM460_RS23345 ba13364ddcd3ee684303191720b2848a 142 PRINTS PR01438 Universal stress protein signature 120 142 2.1E-14 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS23345 ba13364ddcd3ee684303191720b2848a 142 PRINTS PR01438 Universal stress protein signature 2 20 2.1E-14 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS23345 ba13364ddcd3ee684303191720b2848a 142 PRINTS PR01438 Universal stress protein signature 103 115 2.1E-14 T 29-03-2018 IPR006015 Universal stress protein A AM460_RS14090 1012bb781ea1091300d6524f8dc4f526 180 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 1.7E-76 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM460_RS14090 1012bb781ea1091300d6524f8dc4f526 180 SUPERFAMILY SSF51182 1 176 5.44E-79 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS14090 1012bb781ea1091300d6524f8dc4f526 180 Gene3D G3DSA:2.60.120.10 1 179 7.0E-79 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM460_RS14090 1012bb781ea1091300d6524f8dc4f526 180 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 1.3E-83 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM460_RS14090 1012bb781ea1091300d6524f8dc4f526 180 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 169 1.0E-82 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 Gene3D G3DSA:3.40.50.300 2 277 7.4E-53 T 29-03-2018 AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 Gene3D G3DSA:3.40.50.300 326 564 1.7E-61 T 29-03-2018 AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 SUPERFAMILY SSF52540 324 549 4.35E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 Pfam PF00005 ABC transporter 26 165 7.0E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 Pfam PF00005 ABC transporter 346 489 1.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 SUPERFAMILY SSF52540 5 226 9.53E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 SMART SM00382 354 535 6.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22350 cc2656209947644905eea0318a97c4c5 578 SMART SM00382 32 266 6.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS13550 35b5fadf1388f4219250d4f4c60cbdce 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 1.5E-117 T 29-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AM460_RS13550 35b5fadf1388f4219250d4f4c60cbdce 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 348 3.1E-171 T 29-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 AM460_RS07265 e6807ec5cc83f681ac62c68c1bc8ef12 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 3.6E-20 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AM460_RS07265 e6807ec5cc83f681ac62c68c1bc8ef12 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.567 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AM460_RS08635 34d78799814b8dcf36ffb84139cd94bb 257 Gene3D G3DSA:3.40.50.300 22 209 5.9E-13 T 29-03-2018 AM460_RS08635 34d78799814b8dcf36ffb84139cd94bb 257 SUPERFAMILY SSF52540 23 200 3.71E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS09000 01f741886692038354b326e1e3a3e849 276 Pfam PF00326 Prolyl oligopeptidase family 114 273 8.1E-10 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM460_RS09000 01f741886692038354b326e1e3a3e849 276 Gene3D G3DSA:3.40.50.1820 25 275 1.3E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS09000 01f741886692038354b326e1e3a3e849 276 SUPERFAMILY SSF53474 60 274 9.81E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS03815 a16f36c6504ef00f96c61c9e35961cd2 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 169 5.2E-50 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM460_RS03815 a16f36c6504ef00f96c61c9e35961cd2 175 Gene3D G3DSA:3.40.50.300 2 175 1.9E-33 T 29-03-2018 AM460_RS03815 a16f36c6504ef00f96c61c9e35961cd2 175 SUPERFAMILY SSF52540 7 171 6.92E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS03815 a16f36c6504ef00f96c61c9e35961cd2 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 144 2.1E-49 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM460_RS19290 d37d9f57f59671989fc5f635025defa6 270 SUPERFAMILY SSF53335 19 226 2.67E-22 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS19290 d37d9f57f59671989fc5f635025defa6 270 Pfam PF13649 Methyltransferase domain 65 146 5.8E-11 T 29-03-2018 AM460_RS19290 d37d9f57f59671989fc5f635025defa6 270 Gene3D G3DSA:3.40.50.150 18 270 3.9E-19 T 29-03-2018 AM460_RS27310 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 1.2E-53 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 AM460_RS27310 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF01526 Tn3 transposase DDE domain 586 975 4.1E-146 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM460_RS13565 acdb38de67bb1787e0e1905c1ce9db70 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM460_RS13565 acdb38de67bb1787e0e1905c1ce9db70 489 Pfam PF00324 Amino acid permease 21 476 3.8E-147 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM460_RS13565 acdb38de67bb1787e0e1905c1ce9db70 489 PIRSF PIRSF006060 1 488 2.9E-78 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS22765 9bf41178b06cda30491ec30ca5afa335 153 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 19 144 3.5E-27 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AM460_RS12395 16ec7b91e18d59619f3b053492ac18ed 415 Pfam PF02378 Phosphotransferase system, EIIC 41 343 5.8E-13 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS18025 48db9e65d08ec3300ab00844891161d9 353 Pfam PF05128 Domain of unknown function (DUF697) 183 341 1.0E-53 T 29-03-2018 IPR021147 Protein of unknown function DUF697 AM460_RS18025 48db9e65d08ec3300ab00844891161d9 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 1.6E-150 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 AM460_RS18025 48db9e65d08ec3300ab00844891161d9 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 39.242 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 AM460_RS00920 960b6630df735117c77c05b91ae13578 366 SUPERFAMILY SSF52540 4 212 8.76E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS00920 960b6630df735117c77c05b91ae13578 366 SUPERFAMILY SSF56024 206 357 2.92E-12 T 29-03-2018 AM460_RS00920 960b6630df735117c77c05b91ae13578 366 Pfam PF13087 AAA domain 6 164 5.1E-20 T 29-03-2018 AM460_RS00920 960b6630df735117c77c05b91ae13578 366 Gene3D G3DSA:3.30.870.10 182 361 3.0E-11 T 29-03-2018 AM460_RS00920 960b6630df735117c77c05b91ae13578 366 SMART SM00155 304 331 0.0034 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM460_RS00920 960b6630df735117c77c05b91ae13578 366 Pfam PF13091 PLD-like domain 223 356 7.6E-11 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM460_RS00920 960b6630df735117c77c05b91ae13578 366 Gene3D G3DSA:3.40.50.300 1 181 2.2E-17 T 29-03-2018 AM460_RS07740 09d5d72982a3e1d0b89ea368f9d566fb 263 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 263 6.0E-125 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM460_RS07740 09d5d72982a3e1d0b89ea368f9d566fb 263 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 263 6.8E-90 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM460_RS07315 bcb5759b6889a68e243f4d23cf034033 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.904 T 29-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AM460_RS07315 bcb5759b6889a68e243f4d23cf034033 375 Pfam PF03969 AFG1-like ATPase 4 371 1.6E-169 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM460_RS07315 bcb5759b6889a68e243f4d23cf034033 375 Gene3D G3DSA:3.40.50.300 21 371 4.0E-13 T 29-03-2018 AM460_RS07315 bcb5759b6889a68e243f4d23cf034033 375 SUPERFAMILY SSF52540 70 208 2.11E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22470 395fd1722261cade9f0faf7819042e68 477 PIRSF PIRSF002457 1 474 5.7E-150 T 29-03-2018 IPR030676 Citrate carrier CitT-related AM460_RS22470 395fd1722261cade9f0faf7819042e68 477 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 8.2E-167 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS22470 395fd1722261cade9f0faf7819042e68 477 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 474 4.2E-183 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS02330 80c08411292df5317a63cf9a43a28dfe 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 1.8E-52 T 29-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS02330 80c08411292df5317a63cf9a43a28dfe 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 148 3.2E-54 T 29-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM460_RS14545 9aa37ad4acb4c95c42b4d8430192a735 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 29 62 2.0E-8 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS14545 9aa37ad4acb4c95c42b4d8430192a735 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 64 97 0.0027 T 29-03-2018 IPR001451 Hexapeptide repeat AM460_RS14545 9aa37ad4acb4c95c42b4d8430192a735 193 SUPERFAMILY SSF51161 11 182 8.77E-31 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS14545 9aa37ad4acb4c95c42b4d8430192a735 193 Gene3D G3DSA:2.160.10.10 2 183 6.1E-34 T 29-03-2018 AM460_RS08845 343e408b558eb7d222407cf444f28203 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 3.0E-33 T 29-03-2018 IPR009329 Protein of unknown function DUF987 AM460_RS08845 343e408b558eb7d222407cf444f28203 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 2.5E-37 T 29-03-2018 IPR009329 Protein of unknown function DUF987 AM460_RS16165 dc1f450b1322017c276463a05cd49040 240 PIRSF PIRSF029033 1 240 6.6E-103 T 29-03-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AM460_RS16165 dc1f450b1322017c276463a05cd49040 240 Pfam PF04402 Protein of unknown function (DUF541) 42 236 7.0E-18 T 29-03-2018 IPR007497 Protein of unknown function DUF541 AM460_RS17290 16bc3eb9f4e6de9d821f3a8969ac1def 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 213 2.0E-36 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM460_RS17290 16bc3eb9f4e6de9d821f3a8969ac1def 221 Pfam PF01914 MarC family integral membrane protein 5 217 5.8E-71 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM460_RS27255 8060aaa52708fcee8019e20209e3b520 320 Gene3D G3DSA:3.30.420.40 1 171 4.7E-33 T 29-03-2018 AM460_RS27255 8060aaa52708fcee8019e20209e3b520 320 SUPERFAMILY SSF53067 1 156 5.18E-51 T 29-03-2018 AM460_RS27255 8060aaa52708fcee8019e20209e3b520 320 SUPERFAMILY SSF53067 163 319 7.77E-17 T 29-03-2018 AM460_RS27255 8060aaa52708fcee8019e20209e3b520 320 Pfam PF06406 StbA protein 1 317 4.0E-159 T 29-03-2018 IPR009440 Plasmid segregation protein ParM/StbA AM460_RS27255 8060aaa52708fcee8019e20209e3b520 320 Gene3D G3DSA:3.30.420.40 172 303 5.4E-12 T 29-03-2018 AM460_RS16295 83c710f6d5006f9a728020ae6dafd809 161 Pfam PF07813 LTXXQ motif family protein 46 141 1.9E-23 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM460_RS16295 83c710f6d5006f9a728020ae6dafd809 161 PIRSF PIRSF034445 1 152 2.9E-30 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM460_RS27530 69495ecc353851ce5da65809b8d56e93 200 Pfam PF01464 Transglycosylase SLT domain 53 162 3.8E-22 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS27530 69495ecc353851ce5da65809b8d56e93 200 Gene3D G3DSA:1.10.530.10 45 200 4.5E-22 T 29-03-2018 AM460_RS27530 69495ecc353851ce5da65809b8d56e93 200 SUPERFAMILY SSF53955 41 178 3.85E-28 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS00915 26e5863d558b6d8b7296d322a00377bd 326 Gene3D G3DSA:3.40.50.1110 9 321 6.2E-31 T 29-03-2018 AM460_RS00915 26e5863d558b6d8b7296d322a00377bd 326 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 15 209 4.4E-14 T 29-03-2018 IPR005181 Sialate O-acetylesterase domain AM460_RS00915 26e5863d558b6d8b7296d322a00377bd 326 SUPERFAMILY SSF52266 10 265 2.38E-42 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS00915 26e5863d558b6d8b7296d322a00377bd 326 SUPERFAMILY SSF52266 297 323 2.38E-42 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS08250 31e0509b5faa61708629452d24f29855 66 Gene3D G3DSA:1.20.970.20 9 58 3.1E-27 T 29-03-2018 AM460_RS08250 31e0509b5faa61708629452d24f29855 66 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 1 66 3.0E-34 T 29-03-2018 IPR015065 Surface composition regulator AM460_RS08250 31e0509b5faa61708629452d24f29855 66 Pfam PF08971 Glycogen synthesis protein 1 66 1.4E-40 T 29-03-2018 IPR015065 Surface composition regulator AM460_RS08250 31e0509b5faa61708629452d24f29855 66 Hamap MF_00525 Surface composition regulator [glgS]. 1 59 19.884 T 29-03-2018 IPR015065 Surface composition regulator AM460_RS08250 31e0509b5faa61708629452d24f29855 66 SUPERFAMILY SSF109747 1 66 6.41E-43 T 29-03-2018 IPR015065 Surface composition regulator AM460_RS15285 1cd677a5dbeed28a11599a3eb96df1bf 127 Pfam PF16931 Putative phage holin 1 118 2.4E-20 T 29-03-2018 IPR032637 Putative phage holin-like AM460_RS03520 5dc575afaa5a00e4587c8e17a553ad80 224 Pfam PF03473 MOSC domain 47 159 1.0E-20 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM460_RS03520 5dc575afaa5a00e4587c8e17a553ad80 224 Pfam PF03475 3-alpha domain 169 212 1.1E-14 T 29-03-2018 IPR005163 3-alpha domain AM460_RS03520 5dc575afaa5a00e4587c8e17a553ad80 224 Gene3D G3DSA:2.40.33.20 1 224 2.2E-51 T 29-03-2018 AM460_RS03520 5dc575afaa5a00e4587c8e17a553ad80 224 SUPERFAMILY SSF50800 3 223 1.15E-76 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM460_RS14850 c22a9d9ba002d137005c268d4fcea1ea 305 PIRSF PIRSF016660 3 305 1.5E-125 T 29-03-2018 IPR008526 Inner membrane protein YedI AM460_RS14850 c22a9d9ba002d137005c268d4fcea1ea 305 Pfam PF05661 Protein of unknown function (DUF808) 6 291 5.9E-114 T 29-03-2018 IPR008526 Inner membrane protein YedI AM460_RS24220 8404e23b100d4aba614871681fcc1a72 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.8E-15 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24220 8404e23b100d4aba614871681fcc1a72 204 SUPERFAMILY SSF81452 12 202 1.7E-59 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS24220 8404e23b100d4aba614871681fcc1a72 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.6E-88 T 29-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AM460_RS24220 8404e23b100d4aba614871681fcc1a72 204 Gene3D G3DSA:1.20.120.80 19 204 4.3E-52 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM460_RS19635 65e580b3933c6ab12a0da1072b27c6e7 246 Pfam PF16461 Lambda phage tail tube protein, TTP 3 154 5.8E-68 T 29-03-2018 IPR032494 Lambda phage tail tube protein AM460_RS19635 65e580b3933c6ab12a0da1072b27c6e7 246 Gene3D G3DSA:2.60.40.1080 156 246 1.1E-11 T 29-03-2018 AM460_RS19635 65e580b3933c6ab12a0da1072b27c6e7 246 SMART SM00635 160 240 2.4E-18 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 AM460_RS19635 65e580b3933c6ab12a0da1072b27c6e7 246 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 239 8.5E-19 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 AM460_RS24455 e39c02ac664f7b5e0d8ab20af3741469 106 Pfam PF07769 psiF repeat 27 59 1.9E-18 T 29-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM460_RS24455 e39c02ac664f7b5e0d8ab20af3741469 106 Pfam PF07769 psiF repeat 71 103 7.7E-16 T 29-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM460_RS21420 14980054a8b1d5ef78ed3b948fa97bb2 67 Gene3D G3DSA:3.10.350.10 4 65 1.1E-4 T 29-03-2018 AM460_RS21420 14980054a8b1d5ef78ed3b948fa97bb2 67 Pfam PF05489 Phage Tail Protein X 1 60 1.7E-31 T 29-03-2018 IPR008861 Phage Tail Protein X-like AM460_RS16960 55c1fe1cdab84b6a77ee55deeb068acc 346 Gene3D G3DSA:3.30.360.10 136 346 1.7E-36 T 29-03-2018 AM460_RS16960 55c1fe1cdab84b6a77ee55deeb068acc 346 SUPERFAMILY SSF51735 2 192 1.97E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS16960 55c1fe1cdab84b6a77ee55deeb068acc 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.7E-25 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM460_RS16960 55c1fe1cdab84b6a77ee55deeb068acc 346 Gene3D G3DSA:3.40.50.720 1 135 4.7E-36 T 29-03-2018 AM460_RS16960 55c1fe1cdab84b6a77ee55deeb068acc 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 9.2E-20 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM460_RS25620 40dc290a2e2ba6c9fa6b031a4605e15f 194 Pfam PF00419 Fimbrial protein 33 194 1.1E-9 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25620 40dc290a2e2ba6c9fa6b031a4605e15f 194 SUPERFAMILY SSF49401 30 194 1.04E-14 T 29-03-2018 IPR008966 Adhesion domain AM460_RS25620 40dc290a2e2ba6c9fa6b031a4605e15f 194 Gene3D G3DSA:2.60.40.1090 28 194 1.4E-19 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25795 0171a223857a4d7c77966643d7c36335 96 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 5 93 1.4E-27 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25795 0171a223857a4d7c77966643d7c36335 96 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 11 93 4.0E-33 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25795 0171a223857a4d7c77966643d7c36335 96 SUPERFAMILY SSF47345 3 94 1.57E-32 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25795 0171a223857a4d7c77966643d7c36335 96 Gene3D G3DSA:1.10.1200.20 1 94 1.0E-29 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25795 0171a223857a4d7c77966643d7c36335 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 72 93 4.5E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS25795 0171a223857a4d7c77966643d7c36335 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 5 23 4.5E-9 T 29-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 AM460_RS07240 bf4261e3f361fd60412d60414a7bbaf5 197 Gene3D G3DSA:3.90.950.10 1 188 1.4E-71 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS07240 bf4261e3f361fd60412d60414a7bbaf5 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.971 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS07240 bf4261e3f361fd60412d60414a7bbaf5 197 PIRSF PIRSF006305 1 191 3.1E-57 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS07240 bf4261e3f361fd60412d60414a7bbaf5 197 Pfam PF02545 Maf-like protein 4 184 3.1E-59 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS07240 bf4261e3f361fd60412d60414a7bbaf5 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.7E-75 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM460_RS07240 bf4261e3f361fd60412d60414a7bbaf5 197 SUPERFAMILY SSF52972 2 184 1.11E-63 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM460_RS07135 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 5.9E-128 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM460_RS07135 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Gene3D G3DSA:3.40.50.150 99 292 2.5E-33 T 29-03-2018 AM460_RS07135 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 PIRSF PIRSF000401 1 293 5.9E-94 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM460_RS07135 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.0E-105 T 29-03-2018 AM460_RS07135 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.609 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM460_RS07135 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 SUPERFAMILY SSF53335 42 291 4.7E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS22215 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 177 233 5.1E-26 T 29-03-2018 AM460_RS22215 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 99 149 5.1E-26 T 29-03-2018 AM460_RS22215 72687302febc400acb6aaa54e09d2bef 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 3.2E-17 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM460_RS22215 72687302febc400acb6aaa54e09d2bef 306 Gene3D G3DSA:2.40.440.10 94 233 1.2E-27 T 29-03-2018 AM460_RS15880 95c73690a63b720454ecc1f68d87e575 269 PIRSF PIRSF018249 1 268 4.6E-92 T 29-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AM460_RS15880 95c73690a63b720454ecc1f68d87e575 269 Pfam PF13847 Methyltransferase domain 84 218 9.8E-16 T 29-03-2018 IPR025714 Methyltransferase domain AM460_RS15880 95c73690a63b720454ecc1f68d87e575 269 SUPERFAMILY SSF53335 4 250 6.78E-55 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS15880 95c73690a63b720454ecc1f68d87e575 269 Gene3D G3DSA:3.40.50.150 1 269 2.1E-63 T 29-03-2018 AM460_RS09005 7a33220a0101f1440ae85bbb9b3a922d 236 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 20 234 1.8E-30 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin AM460_RS09005 7a33220a0101f1440ae85bbb9b3a922d 236 SUPERFAMILY SSF56935 75 213 5.72E-6 T 29-03-2018 AM460_RS09005 7a33220a0101f1440ae85bbb9b3a922d 236 Gene3D G3DSA:2.40.160.40 23 233 9.9E-28 T 29-03-2018 AM460_RS08450 93e7652dc8e8de05dc6710ca1f949b01 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 424 1.9E-120 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM460_RS08450 93e7652dc8e8de05dc6710ca1f949b01 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 429 6.2E-155 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS08450 93e7652dc8e8de05dc6710ca1f949b01 434 PIRSF PIRSF006066 7 434 1.4E-162 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 Pfam PF07549 SecD/SecF GG Motif 39 66 1.3E-11 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.189 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 289 2.5E-54 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 Pfam PF02355 Protein export membrane protein 117 301 1.8E-69 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 Gene3D G3DSA:1.20.1640.10 92 313 2.5E-31 T 29-03-2018 AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 SUPERFAMILY SSF82866 79 303 6.41E-39 T 29-03-2018 AM460_RS24325 6f0f70b2ec5ace4d18481c7117b55854 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 1.9E-87 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM460_RS12300 6b14ab860d8ddf34315411236b85ea28 418 Gene3D G3DSA:1.20.1250.20 3 194 2.4E-10 T 29-03-2018 AM460_RS12300 6b14ab860d8ddf34315411236b85ea28 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 2.9E-226 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AM460_RS12300 6b14ab860d8ddf34315411236b85ea28 418 SUPERFAMILY SSF103473 6 407 7.19E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS12300 6b14ab860d8ddf34315411236b85ea28 418 Pfam PF03825 Nucleoside H+ symporter 1 407 2.3E-189 T 29-03-2018 AM460_RS12300 6b14ab860d8ddf34315411236b85ea28 418 Gene3D G3DSA:1.20.1250.20 199 415 2.3E-23 T 29-03-2018 AM460_RS15315 fb8c3e5ffa034f89b62ecff78dd95341 620 Pfam PF05876 Phage terminase large subunit (GpA) 13 589 2.2E-127 T 29-03-2018 IPR008866 Bacteriophage lambda, GpA AM460_RS04775 2268f4daf4bf7885738375c940773157 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 5.1E-21 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AM460_RS04775 2268f4daf4bf7885738375c940773157 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 47.247 T 29-03-2018 IPR022848 Small heat shock protein IbpB AM460_RS04775 2268f4daf4bf7885738375c940773157 142 SUPERFAMILY SSF49764 30 134 4.19E-18 T 29-03-2018 IPR008978 HSP20-like chaperone AM460_RS04775 2268f4daf4bf7885738375c940773157 142 Gene3D G3DSA:2.60.40.790 2 135 2.6E-19 T 29-03-2018 IPR008978 HSP20-like chaperone AM460_RS03695 4f4bbc6bd86ef11af3981be7171e738b 449 Gene3D G3DSA:1.20.1250.20 10 228 4.9E-25 T 29-03-2018 AM460_RS03695 4f4bbc6bd86ef11af3981be7171e738b 449 SUPERFAMILY SSF103473 15 435 1.06E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS03695 4f4bbc6bd86ef11af3981be7171e738b 449 Gene3D G3DSA:1.20.1250.20 229 448 6.5E-21 T 29-03-2018 AM460_RS03695 4f4bbc6bd86ef11af3981be7171e738b 449 Pfam PF07690 Major Facilitator Superfamily 54 386 2.1E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS18440 4da3df14cb375aa2cb593cde9dafc962 968 SUPERFAMILY SSF49464 4 80 6.28E-7 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain AM460_RS18440 4da3df14cb375aa2cb593cde9dafc962 968 Gene3D G3DSA:2.60.40.1120 4 114 1.9E-8 T 29-03-2018 AM460_RS18440 4da3df14cb375aa2cb593cde9dafc962 968 Pfam PF08400 Prophage tail fibre N-terminal 1 134 3.5E-70 T 29-03-2018 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal AM460_RS11195 6a91a9d34b56bb51e1e98d0c3e9f65e8 133 Gene3D G3DSA:3.30.2000.10 3 100 1.3E-4 T 29-03-2018 AM460_RS11195 6a91a9d34b56bb51e1e98d0c3e9f65e8 133 SUPERFAMILY SSF143749 3 132 2.62E-51 T 29-03-2018 IPR009312 Minor tail protein U-like AM460_RS11195 6a91a9d34b56bb51e1e98d0c3e9f65e8 133 Pfam PF06141 Phage minor tail protein U 3 131 1.3E-48 T 29-03-2018 IPR009312 Minor tail protein U-like AM460_RS24075 8c0fc28afdc8cc4f0ff842ba48eac564 156 Pfam PF10777 Inner membrane protein YlaC 1 152 1.5E-67 T 29-03-2018 IPR019713 Inner membrane protein YlaC AM460_RS00395 0390a697ad96c60a319f7ddb86199a2e 247 Gene3D G3DSA:3.40.50.300 1 198 4.7E-5 T 29-03-2018 AM460_RS00395 0390a697ad96c60a319f7ddb86199a2e 247 SUPERFAMILY SSF52540 5 88 1.65E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27220 c7069891e1c23a0b49e29dc875133f77 141 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 42 141 1.0E-45 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS27220 c7069891e1c23a0b49e29dc875133f77 141 Pfam PF03230 Antirestriction protein 45 141 2.3E-28 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS04345 a1d7a82621861acf64f75e6389f719d2 87 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 0.005 T 29-03-2018 AM460_RS04345 a1d7a82621861acf64f75e6389f719d2 87 SUPERFAMILY SSF55021 3 75 4.12E-12 T 29-03-2018 AM460_RS04345 a1d7a82621861acf64f75e6389f719d2 87 Gene3D G3DSA:3.30.70.260 1 79 9.6E-8 T 29-03-2018 AM460_RS04345 a1d7a82621861acf64f75e6389f719d2 87 Pfam PF13710 ACT domain 13 73 2.2E-27 T 29-03-2018 AM460_RS03465 8a56bfbc12f9b301174b33a9fc0c62ec 99 Gene3D G3DSA:3.30.70.860 24 96 1.3E-28 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain AM460_RS03465 8a56bfbc12f9b301174b33a9fc0c62ec 99 Pfam PF04175 Protein of unknown function (DUF406) 5 96 3.1E-29 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM460_RS03465 8a56bfbc12f9b301174b33a9fc0c62ec 99 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 1.8E-38 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM460_RS08365 206cddacc640ee055a1e81d313a05a11 269 Gene3D G3DSA:3.40.50.300 6 233 3.4E-56 T 29-03-2018 AM460_RS08365 206cddacc640ee055a1e81d313a05a11 269 SUPERFAMILY SSF52540 10 230 4.5E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS08365 206cddacc640ee055a1e81d313a05a11 269 SMART SM00382 34 223 6.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS08365 206cddacc640ee055a1e81d313a05a11 269 Pfam PF00005 ABC transporter 26 173 1.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22275 235c90fa10047625d6d1f6b499a59403 240 SUPERFAMILY SSF52540 1 235 2.1E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS22275 235c90fa10047625d6d1f6b499a59403 240 Pfam PF00005 ABC transporter 17 165 1.1E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS22275 235c90fa10047625d6d1f6b499a59403 240 Gene3D G3DSA:3.40.50.300 1 240 5.0E-76 T 29-03-2018 AM460_RS22275 235c90fa10047625d6d1f6b499a59403 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS22275 235c90fa10047625d6d1f6b499a59403 240 SMART SM00382 26 213 1.7E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS22275 235c90fa10047625d6d1f6b499a59403 240 PIRSF PIRSF039085 1 240 2.8E-109 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM460_RS11210 9eedb5517f09f78a67b2daff1c916936 109 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 2 106 2.6E-40 T 29-03-2018 IPR009350 Minor tail T AM460_RS11210 9eedb5517f09f78a67b2daff1c916936 109 Pfam PF06223 Minor tail protein T 6 105 8.3E-40 T 29-03-2018 IPR009350 Minor tail T AM460_RS15815 04e1f52175e3f1b2ac5397051b06b618 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 16 417 9.7E-212 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AM460_RS15815 04e1f52175e3f1b2ac5397051b06b618 427 Pfam PF04403 Paraquat-inducible protein A 263 418 5.4E-43 T 29-03-2018 IPR007498 Paraquat-inducible protein A AM460_RS15815 04e1f52175e3f1b2ac5397051b06b618 427 Pfam PF04403 Paraquat-inducible protein A 66 217 1.5E-39 T 29-03-2018 IPR007498 Paraquat-inducible protein A AM460_RS10455 90d13079eaa7c892ff5ed4104468af88 423 SUPERFAMILY SSF54373 175 277 7.45E-18 T 29-03-2018 AM460_RS10455 90d13079eaa7c892ff5ed4104468af88 423 SUPERFAMILY SSF51905 2 175 2.42E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10455 90d13079eaa7c892ff5ed4104468af88 423 SUPERFAMILY SSF51905 280 402 2.42E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10455 90d13079eaa7c892ff5ed4104468af88 423 Gene3D G3DSA:3.50.50.60 1 358 8.0E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10455 90d13079eaa7c892ff5ed4104468af88 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.2E-6 T 29-03-2018 AM460_RS10455 90d13079eaa7c892ff5ed4104468af88 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.2E-6 T 29-03-2018 AM460_RS10455 90d13079eaa7c892ff5ed4104468af88 423 Pfam PF12831 FAD dependent oxidoreductase 6 150 3.7E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 2.9E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 2.9E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 2.9E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 2.9E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 2.9E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 2.9E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 Pfam PF00813 FliP family 48 239 1.5E-79 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 6.8E-95 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 1.1E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 1.1E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 1.1E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 1.1E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 1.1E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS14900 12536f187723375302b5f3be52d0d5e7 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 1.1E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM460_RS24280 87cef74b27fc4eec4840ccaf8fa4840d 172 PIRSF PIRSF006162 11 169 3.0E-58 T 29-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM460_RS24280 87cef74b27fc4eec4840ccaf8fa4840d 172 SUPERFAMILY SSF101307 15 162 6.67E-49 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM460_RS24280 87cef74b27fc4eec4840ccaf8fa4840d 172 Gene3D G3DSA:1.10.3760.10 50 167 5.3E-39 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM460_RS24280 87cef74b27fc4eec4840ccaf8fa4840d 172 Pfam PF04608 Phosphatidylglycerophosphatase A 22 162 1.7E-51 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM460_RS24395 029c0d330bf9cda3dd6b9ce363a19a97 302 Pfam PF00480 ROK family 3 301 8.4E-100 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS24395 029c0d330bf9cda3dd6b9ce363a19a97 302 Gene3D G3DSA:3.30.420.40 116 302 1.3E-51 T 29-03-2018 AM460_RS24395 029c0d330bf9cda3dd6b9ce363a19a97 302 Gene3D G3DSA:3.30.420.40 1 115 3.8E-23 T 29-03-2018 AM460_RS24395 029c0d330bf9cda3dd6b9ce363a19a97 302 SUPERFAMILY SSF53067 3 300 1.76E-62 T 29-03-2018 AM460_RS24395 029c0d330bf9cda3dd6b9ce363a19a97 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM460_RS04870 c93f34270e866376d76b3a16185785a3 444 Pfam PF00860 Permease family 32 405 1.6E-45 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS04870 c93f34270e866376d76b3a16185785a3 444 PIRSF PIRSF005353 6 444 3.0E-170 T 29-03-2018 IPR026033 Purine permease PbuG-like AM460_RS15380 d03240be14805b269a1a8833743e7fbd 208 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 131 4.3E-30 T 29-03-2018 IPR006521 Tail protein I AM460_RS15380 d03240be14805b269a1a8833743e7fbd 208 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 146 8.8E-35 T 29-03-2018 IPR006521 Tail protein I AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 SUPERFAMILY SSF89447 1 135 3.98E-46 T 29-03-2018 AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 Gene3D G3DSA:2.10.260.10 81 128 5.3E-4 T 29-03-2018 AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 Gene3D G3DSA:2.10.260.10 3 40 0.019 T 29-03-2018 AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 6.2E-68 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 3.0E-78 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.628 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 135 2.8E-21 T 29-03-2018 IPR020603 MraZ domain AM460_RS25975 526d26ccf42f95d6dbe58659d0dea996 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 3.8E-25 T 29-03-2018 IPR020603 MraZ domain AM460_RS23650 e59b169207cba112c963325194bd6b71 208 Pfam PF08242 Methyltransferase domain 44 141 4.3E-7 T 29-03-2018 IPR013217 Methyltransferase type 12 AM460_RS23650 e59b169207cba112c963325194bd6b71 208 PIRSF PIRSF011491 1 208 2.1E-96 T 29-03-2018 IPR016584 Methyltransferase VrtF-like AM460_RS23650 e59b169207cba112c963325194bd6b71 208 SUPERFAMILY SSF53335 7 183 1.76E-15 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS23650 e59b169207cba112c963325194bd6b71 208 Gene3D G3DSA:3.40.50.150 15 203 5.7E-11 T 29-03-2018 AM460_RS12150 75ddc9a0da2345f1dbea98d2c8ab1b29 166 SMART SM00877 3 79 1.4E-26 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12150 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Pfam PF00936 BMC domain 4 79 2.0E-21 T 29-03-2018 IPR000249 Microcompartment protein, bacteria AM460_RS12150 75ddc9a0da2345f1dbea98d2c8ab1b29 166 SUPERFAMILY SSF143414 3 92 1.01E-23 T 29-03-2018 AM460_RS12150 75ddc9a0da2345f1dbea98d2c8ab1b29 166 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site AM460_RS12150 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 109 162 3.9E-35 T 29-03-2018 IPR032298 Ethanolamine utilization protein EutK, C-terminal AM460_RS12150 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Gene3D G3DSA:1.10.10.10 105 163 3.1E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS12150 75ddc9a0da2345f1dbea98d2c8ab1b29 166 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 5.0E-9 T 29-03-2018 AM460_RS13760 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 1.9E-25 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 AM460_RS13760 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 150 1.3E-20 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 Pfam PF08402 TOBE domain 278 348 3.7E-8 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 Gene3D G3DSA:2.40.50.140 290 341 6.3E-14 T 29-03-2018 AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 SMART SM00382 29 326 1.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 SUPERFAMILY SSF52540 4 242 2.66E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 Gene3D G3DSA:2.40.50.100 240 289 1.3E-12 T 29-03-2018 AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 Pfam PF00005 ABC transporter 21 162 1.1E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 SUPERFAMILY SSF50331 237 355 3.89E-28 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM460_RS06160 5fff4b7f2e49d369f883912339218031 356 Gene3D G3DSA:3.40.50.300 2 239 5.6E-68 T 29-03-2018 AM460_RS12125 4fa8d0f756fe1f6c432c43116218b40c 408 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 391 7.2E-142 T 29-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 AM460_RS12125 4fa8d0f756fe1f6c432c43116218b40c 408 PIRSF PIRSF019466 1 408 9.8E-129 T 29-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 AM460_RS16920 b8fb9d7c83b74ae502af35fdae0bb438 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 7.3E-151 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM460_RS16920 b8fb9d7c83b74ae502af35fdae0bb438 352 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.958 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM460_RS16920 b8fb9d7c83b74ae502af35fdae0bb438 352 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 2.0E-108 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AM460_RS13770 bae9b65a0fbd9c67ab7f39c3e09d3c1e 667 Pfam PF04434 SWIM zinc finger 64 88 0.011 T 29-03-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 AM460_RS13770 bae9b65a0fbd9c67ab7f39c3e09d3c1e 667 Pfam PF04434 SWIM zinc finger 160 184 0.085 T 29-03-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 AM460_RS08620 4af329e4ed03367187ae9a31d3d2dc8e 499 Pfam PF01384 Phosphate transporter family 30 488 2.3E-85 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM460_RS08310 63a8bfe23ba79c9530ee15a3d71fa7ce 598 Pfam PF05935 Arylsulfotransferase (ASST) 146 587 1.0E-140 T 29-03-2018 IPR010262 Arylsulfotransferase, C-terminal AM460_RS08310 63a8bfe23ba79c9530ee15a3d71fa7ce 598 Hamap MF_00933 Arylsulfate sulfotransferase AssT [assT]. 1 598 86.61 T 29-03-2018 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria GO:0004062 AM460_RS08310 63a8bfe23ba79c9530ee15a3d71fa7ce 598 Pfam PF17425 Arylsulfotransferase Ig-like domain 42 127 2.5E-26 T 29-03-2018 IPR035391 Arylsulfotransferase, Ig-like domain AM460_RS27905 b3d7367b848aaafbbdb62c34236c86de 436 Pfam PF03235 Protein of unknown function DUF262 30 165 4.3E-15 T 29-03-2018 IPR004919 Domain of unknown function DUF262 AM460_RS18870 0b0bf4f1305f9216153bfac86a8062a8 302 Gene3D G3DSA:3.90.550.10 1 302 2.0E-59 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS18870 0b0bf4f1305f9216153bfac86a8062a8 302 Pfam PF00483 Nucleotidyl transferase 10 276 2.0E-25 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM460_RS18870 0b0bf4f1305f9216153bfac86a8062a8 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.8E-116 T 29-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AM460_RS18870 0b0bf4f1305f9216153bfac86a8062a8 302 SUPERFAMILY SSF53448 9 291 1.04E-62 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS10925 88dafdd2f1e6b9926ee59fd6763d3056 109 Gene3D G3DSA:1.20.120.20 5 84 1.6E-4 T 29-03-2018 AM460_RS10925 88dafdd2f1e6b9926ee59fd6763d3056 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 107 6.6E-26 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 Pfam PF02384 N-6 DNA Methylase 161 499 5.1E-110 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 SUPERFAMILY SSF53335 15 538 1.6E-135 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 3.2E-18 T 29-03-2018 AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 3.2E-18 T 29-03-2018 AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 318 342 3.2E-18 T 29-03-2018 AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 3.2E-18 T 29-03-2018 AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 Gene3D G3DSA:3.40.50.150 183 492 1.2E-58 T 29-03-2018 AM460_RS00670 71e53d28cdca6b63bc3d0d1595052ce6 539 Pfam PF12161 HsdM N-terminal domain 16 144 5.9E-24 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM460_RS13955 643ae15ce708edbe11cd0555580340a0 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.5E-21 T 29-03-2018 IPR032525 Peptidase family U32, C-terminal AM460_RS13955 643ae15ce708edbe11cd0555580340a0 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM460_RS13955 643ae15ce708edbe11cd0555580340a0 453 Gene3D G3DSA:3.20.20.70 7 172 3.6E-4 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS13955 643ae15ce708edbe11cd0555580340a0 453 Pfam PF01136 Peptidase family U32 75 343 3.6E-97 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM460_RS17815 81a5e47c144e26efd6ec2439bdec399b 288 Gene3D G3DSA:3.20.20.100 1 288 5.6E-61 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS17815 81a5e47c144e26efd6ec2439bdec399b 288 SUPERFAMILY SSF51430 11 285 7.99E-62 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS17815 81a5e47c144e26efd6ec2439bdec399b 288 Pfam PF00248 Aldo/keto reductase family 15 284 3.0E-45 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS00985 b392c62ba964312328848f057cd17fde 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 2.9E-60 T 29-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system AM460_RS02135 da4ff030bc55881bc9e3a5e7937fa094 98 Pfam PF11080 Endoribonuclease GhoS 5 94 1.1E-31 T 29-03-2018 IPR022597 Endoribonuclease GhoS GO:0004521 AM460_RS02165 d081c648e80665935a37b45752ab975d 174 SUPERFAMILY SSF49401 31 174 4.52E-5 T 29-03-2018 IPR008966 Adhesion domain AM460_RS13795 eaecd659e67b6505b4eb3047bae922aa 1210 Gene3D G3DSA:1.25.10.10 39 927 1.2E-4 T 29-03-2018 IPR011989 Armadillo-like helical AM460_RS13795 eaecd659e67b6505b4eb3047bae922aa 1210 Pfam PF13569 Domain of unknown function (DUF4132) 954 1138 6.3E-42 T 29-03-2018 IPR025406 Domain of unknown function DUF4132 AM460_RS24320 9423b535b2adce32a0371dc85f4279dc 115 Gene3D G3DSA:3.40.1800.10 6 86 8.7E-8 T 29-03-2018 AM460_RS24320 9423b535b2adce32a0371dc85f4279dc 115 Pfam PF01844 HNH endonuclease 27 75 6.6E-12 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM460_RS24320 9423b535b2adce32a0371dc85f4279dc 115 SMART SM00507 15 70 3.2E-6 T 29-03-2018 IPR003615 HNH nuclease AM460_RS15320 0f17b3bb04b4551ee1e7f66a0de228bd 77 SUPERFAMILY SSF64210 8 66 1.31E-7 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 AM460_RS15320 0f17b3bb04b4551ee1e7f66a0de228bd 77 Pfam PF02831 gpW 7 76 1.8E-18 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 AM460_RS15320 0f17b3bb04b4551ee1e7f66a0de228bd 77 Gene3D G3DSA:3.30.1580.10 7 74 2.2E-21 T 29-03-2018 AM460_RS05935 f56b7eba91ae17d83b0df47fb53fe091 350 Pfam PF10951 Protein of unknown function (DUF2776) 1 347 2.1E-152 T 29-03-2018 IPR021240 Protein of unknown function DUF2776 AM460_RS22435 53d6792bf512de722410e7a18aa7ab39 251 Gene3D G3DSA:3.40.50.150 2 226 1.6E-39 T 29-03-2018 AM460_RS22435 53d6792bf512de722410e7a18aa7ab39 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 1.5E-77 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM460_RS22435 53d6792bf512de722410e7a18aa7ab39 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 31.882 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM460_RS22435 53d6792bf512de722410e7a18aa7ab39 251 Pfam PF08241 Methyltransferase domain 47 138 5.8E-24 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM460_RS22435 53d6792bf512de722410e7a18aa7ab39 251 SUPERFAMILY SSF53335 10 244 5.31E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS20940 07f82b6b06d9bae672bef43d233d89a7 410 Pfam PF06224 Winged helix DNA-binding domain 38 381 1.8E-84 T 29-03-2018 IPR009351 Protein of unknown function DUF1006 AM460_RS14805 2f5d8483cb7a6259abba161a6b734414 283 PIRSF PIRSF037798 1 283 8.5E-149 T 29-03-2018 IPR017283 Protein deglycase HchA AM460_RS14805 2f5d8483cb7a6259abba161a6b734414 283 SUPERFAMILY SSF52317 7 278 1.71E-54 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS14805 2f5d8483cb7a6259abba161a6b734414 283 Gene3D G3DSA:3.40.50.880 1 282 1.9E-56 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM460_RS14805 2f5d8483cb7a6259abba161a6b734414 283 Hamap MF_01046 Protein deglycase HchA [hchA]. 1 283 66.754 T 29-03-2018 IPR017283 Protein deglycase HchA AM460_RS10485 166d79398dc297af7908df9964585539 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 6.0E-21 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS10485 166d79398dc297af7908df9964585539 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 1.3E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS10485 166d79398dc297af7908df9964585539 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 1.3E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS10485 166d79398dc297af7908df9964585539 50 Pfam PF01848 Hok/gef family 5 46 6.2E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM460_RS18680 10dbd344095f4b4d17b7ce951c2b67ac 221 Gene3D G3DSA:3.40.50.620 44 184 1.9E-4 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS18680 10dbd344095f4b4d17b7ce951c2b67ac 221 Pfam PF02677 Uncharacterized BCR, COG1636 20 194 3.0E-64 T 29-03-2018 IPR003828 Probable epoxyqueuosine reductase QueH AM460_RS14500 eecd2356056ee391138b167a7e54b35e 165 Pfam PF11682 Probable zinc-ribbon 31 152 1.9E-70 T 29-03-2018 IPR021696 Protein of unknown function DUF3279 AM460_RS07235 b96efb474059a42b2d95c3386f11e1c2 162 PIRSF PIRSF018472 2 162 4.6E-58 T 29-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AM460_RS07235 b96efb474059a42b2d95c3386f11e1c2 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 5.6E-42 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM460_RS07235 b96efb474059a42b2d95c3386f11e1c2 162 Pfam PF04093 rod shape-determining protein MreD 5 155 1.7E-46 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM460_RS05195 f93f64fdf3f900b3f6a70f31ea436868 143 SUPERFAMILY SSF52821 15 142 2.62E-30 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS05195 f93f64fdf3f900b3f6a70f31ea436868 143 Gene3D G3DSA:3.40.250.10 20 143 7.5E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS05195 f93f64fdf3f900b3f6a70f31ea436868 143 Pfam PF00581 Rhodanese-like domain 43 133 8.7E-17 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS05195 f93f64fdf3f900b3f6a70f31ea436868 143 SMART SM00450 40 138 9.5E-22 T 29-03-2018 IPR001763 Rhodanese-like domain AM460_RS03410 44ff42717c87ffff013b58afdf41dbc2 319 Gene3D G3DSA:3.30.70.1070 241 316 4.8E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS03410 44ff42717c87ffff013b58afdf41dbc2 319 SUPERFAMILY SSF110997 244 314 3.66E-20 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS03410 44ff42717c87ffff013b58afdf41dbc2 319 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 315 1.1E-115 T 29-03-2018 IPR011930 Cell division protein FtsN GO:0005515 AM460_RS03410 44ff42717c87ffff013b58afdf41dbc2 319 Pfam PF05036 Sporulation related domain 246 313 1.4E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM460_RS03410 44ff42717c87ffff013b58afdf41dbc2 319 Hamap MF_02039 Cell division protein FtsN [ftsN]. 36 319 34.534 T 29-03-2018 IPR011930 Cell division protein FtsN GO:0005515 AM460_RS13750 42f56e489167f808d0238f10719f137e 561 Pfam PF06580 Histidine kinase 371 448 2.1E-25 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM460_RS13750 42f56e489167f808d0238f10719f137e 561 Gene3D G3DSA:3.30.565.10 384 558 3.2E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13750 42f56e489167f808d0238f10719f137e 561 SUPERFAMILY SSF55781 243 359 5.23E-8 T 29-03-2018 IPR029016 GAF domain-like AM460_RS13750 42f56e489167f808d0238f10719f137e 561 Gene3D G3DSA:3.30.450.40 231 372 5.0E-7 T 29-03-2018 IPR029016 GAF domain-like AM460_RS13750 42f56e489167f808d0238f10719f137e 561 Pfam PF07694 5TMR of 5TMR-LYT 28 196 8.5E-57 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AM460_RS13750 42f56e489167f808d0238f10719f137e 561 SUPERFAMILY SSF55874 424 556 2.88E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM460_RS13750 42f56e489167f808d0238f10719f137e 561 SMART SM00065 218 365 4.9E-12 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM460_RS06170 aa85ee73387dd9c7037a4ced0ae55980 146 ProDom PD059127 YHHA MEMBRANE OUTER PRECURSOR SIGNAL STY4259 ORFQ ECS4294 1 146 4.0E-47 T 29-03-2018 IPR020158 Protein of unknown function DUF2756 AM460_RS06170 aa85ee73387dd9c7037a4ced0ae55980 146 Pfam PF10956 Protein of unknown function (DUF2756) 1 105 4.0E-53 T 29-03-2018 IPR020158 Protein of unknown function DUF2756 AM460_RS19405 bf3a81efa85f7cb3970d059a3868d758 122 Pfam PF05666 Fels-1 Prophage Protein-like 22 61 1.1E-14 T 29-03-2018 IPR008617 Uncharacterised protein family, YcgJ AM460_RS19405 bf3a81efa85f7cb3970d059a3868d758 122 Pfam PF05666 Fels-1 Prophage Protein-like 69 120 1.4E-18 T 29-03-2018 IPR008617 Uncharacterised protein family, YcgJ AM460_RS00590 7c51d9b7241544a9c3a839dadd8fdf77 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 46.01 T 29-03-2018 IPR020914 Uncharacterised protein family UPF0442 AM460_RS00590 7c51d9b7241544a9c3a839dadd8fdf77 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 3.1E-34 T 29-03-2018 IPR024528 Threonine/Serine exporter, ThrE AM460_RS09805 e820143993fc85ae295c4a5f64197ca2 256 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 22 247 3.5E-89 T 29-03-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC AM460_RS09805 e820143993fc85ae295c4a5f64197ca2 256 SUPERFAMILY SSF53623 14 123 7.78E-8 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS09805 e820143993fc85ae295c4a5f64197ca2 256 Gene3D G3DSA:3.40.1190.10 12 209 6.0E-9 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM460_RS18990 2704174e2e49896779d1eadadc9ed564 79 SUPERFAMILY SSF140376 3 75 2.48E-28 T 29-03-2018 AM460_RS18990 2704174e2e49896779d1eadadc9ed564 79 Pfam PF06150 ChaB 9 75 1.2E-27 T 29-03-2018 IPR009317 ChaB AM460_RS22360 9cc81d16a4ada6aa83fe23a5941d98e1 368 Gene3D G3DSA:3.40.1710.10 38 188 2.0E-25 T 29-03-2018 AM460_RS22360 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.3E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS22360 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.3E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS22360 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.3E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS22360 9cc81d16a4ada6aa83fe23a5941d98e1 368 Pfam PF12698 ABC-2 family transporter protein 25 358 1.1E-48 T 29-03-2018 AM460_RS02915 680685374f6e72843fe73cf9badaa17b 284 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 15 283 7.2E-105 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM460_RS02915 680685374f6e72843fe73cf9badaa17b 284 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 15 283 3.5E-142 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM460_RS01815 7c0922dd9c51447471b5d25191adbbc6 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 15 385 1.2E-149 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM460_RS01815 7c0922dd9c51447471b5d25191adbbc6 387 SUPERFAMILY SSF56059 1 169 2.72E-84 T 29-03-2018 AM460_RS01815 7c0922dd9c51447471b5d25191adbbc6 387 SUPERFAMILY SSF56059 264 384 2.72E-84 T 29-03-2018 AM460_RS01815 7c0922dd9c51447471b5d25191adbbc6 387 SUPERFAMILY SSF52440 171 277 7.48E-37 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM460_RS19950 45b882f08cc8f62361adecffc05b1c16 153 Pfam PF12158 Protein of unknown function (DUF3592) 7 138 1.8E-14 T 29-03-2018 IPR021994 Protein of unknown function DUF3592 AM460_RS06180 db55d6eb65f05c4539db703a5c243e06 162 Pfam PF00583 Acetyltransferase (GNAT) family 34 136 2.6E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS06180 db55d6eb65f05c4539db703a5c243e06 162 SUPERFAMILY SSF55729 4 161 4.8E-37 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS06180 db55d6eb65f05c4539db703a5c243e06 162 Gene3D G3DSA:3.40.630.30 1 162 9.2E-35 T 29-03-2018 AM460_RS14190 115d5a4081836103ad363b4a5bd0f9dd 16 Pfam PF08047 Histidine operon leader peptide 1 16 4.6E-10 T 29-03-2018 IPR012565 Histidine operon leader peptide GO:0000105 AM460_RS17665 00b301637e93d58de57dbf8bb29e9026 264 Gene3D G3DSA:1.10.3720.10 7 263 3.2E-37 T 29-03-2018 AM460_RS17665 00b301637e93d58de57dbf8bb29e9026 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 4.6E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS17665 00b301637e93d58de57dbf8bb29e9026 264 SUPERFAMILY SSF161098 6 257 4.45E-49 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS00595 fcc61c0ea47cfb1f334791ad9d324d25 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 44.343 T 29-03-2018 IPR020917 Primosomal protein 1 GO:0006260 AM460_RS10940 6f85ee965f504e1779dec0de91f544fb 134 PIRSF PIRSF002096 1 134 9.8E-56 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM460_RS10940 6f85ee965f504e1779dec0de91f544fb 134 Gene3D G3DSA:4.10.430.10 93 134 2.6E-19 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM460_RS10940 6f85ee965f504e1779dec0de91f544fb 134 SUPERFAMILY SSF81273 92 134 7.85E-12 T 29-03-2018 AM460_RS10940 6f85ee965f504e1779dec0de91f544fb 134 SUPERFAMILY SSF81273 3 58 1.96E-18 T 29-03-2018 AM460_RS10940 6f85ee965f504e1779dec0de91f544fb 134 Gene3D G3DSA:1.10.287.1050 1 57 2.6E-22 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AM460_RS10940 6f85ee965f504e1779dec0de91f544fb 134 Pfam PF00816 H-NS histone family 38 128 3.7E-20 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM460_RS10940 6f85ee965f504e1779dec0de91f544fb 134 SMART SM00528 87 134 1.5E-27 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM460_RS02085 20fde03ece91131961c278aac4e36553 191 Gene3D G3DSA:1.10.10.60 2 52 4.2E-7 T 29-03-2018 AM460_RS02085 20fde03ece91131961c278aac4e36553 191 SUPERFAMILY SSF46689 3 69 9.75E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS02085 20fde03ece91131961c278aac4e36553 191 SUPERFAMILY SSF48498 86 179 1.08E-5 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM460_RS02085 20fde03ece91131961c278aac4e36553 191 Gene3D G3DSA:1.10.357.10 53 180 6.4E-14 T 29-03-2018 AM460_RS06845 d44845a02f8ee59d1e9b327b0534f8f6 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 7.6E-38 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM460_RS06845 d44845a02f8ee59d1e9b327b0534f8f6 110 SUPERFAMILY SSF54843 1 109 4.06E-43 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM460_RS06845 d44845a02f8ee59d1e9b327b0534f8f6 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-51 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS06845 d44845a02f8ee59d1e9b327b0534f8f6 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 29-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS06845 d44845a02f8ee59d1e9b327b0534f8f6 110 Gene3D G3DSA:3.90.470.10 1 110 3.3E-43 T 29-03-2018 AM460_RS06845 d44845a02f8ee59d1e9b327b0534f8f6 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.067 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS25210 02db67d67fd12651da050acfac66bb42 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM460_RS25210 02db67d67fd12651da050acfac66bb42 256 SUPERFAMILY SSF56317 4 249 1.96E-60 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS25210 02db67d67fd12651da050acfac66bb42 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 1.9E-31 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS25210 02db67d67fd12651da050acfac66bb42 256 Gene3D G3DSA:3.60.110.10 2 256 1.0E-53 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM460_RS27190 922962f3dd487b75f379cf5d037cc89d 453 Pfam PF12083 Domain of unknown function (DUF3560) 89 208 1.5E-37 T 29-03-2018 IPR021944 Protein of unknown function DUF3560 AM460_RS21290 acb154f30ccdc404fca9777f17ab53e4 84 Pfam PF04606 Ogr/Delta-like zinc finger 15 61 1.2E-20 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type AM460_RS10930 4c50622d1f0d6d6c99358eb8ce0a5eb9 114 SUPERFAMILY SSF159894 1 111 2.25E-59 T 29-03-2018 AM460_RS10930 4c50622d1f0d6d6c99358eb8ce0a5eb9 114 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 1.6E-60 T 29-03-2018 IPR018994 Protein of unknown function DUF2002 AM460_RS09015 75e01abe05efc6789e6ad0904dfb3ab7 311 SUPERFAMILY SSF53474 65 308 5.56E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS09015 75e01abe05efc6789e6ad0904dfb3ab7 311 Gene3D G3DSA:3.40.50.1820 55 308 1.7E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS09015 75e01abe05efc6789e6ad0904dfb3ab7 311 Pfam PF07859 alpha/beta hydrolase fold 111 284 3.5E-9 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM460_RS10140 04b4f148e07be97254a550503f86faf2 273 Pfam PF13503 Domain of unknown function (DUF4123) 21 129 4.5E-14 T 29-03-2018 IPR025391 Domain of unknown function DUF4123 AM460_RS01005 1ac37e35b04cb5e8660f0a0d0faf9b42 157 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 60 157 3.0E-54 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS01005 1ac37e35b04cb5e8660f0a0d0faf9b42 157 Pfam PF03230 Antirestriction protein 62 157 1.5E-36 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS07320 33e7dc7d11d7b539319895ea6c933e23 142 Pfam PF00572 Ribosomal protein L13 15 138 5.0E-57 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM460_RS07320 33e7dc7d11d7b539319895ea6c933e23 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.6E-68 T 29-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS07320 33e7dc7d11d7b539319895ea6c933e23 142 PIRSF PIRSF002181 1 142 7.2E-51 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM460_RS07320 33e7dc7d11d7b539319895ea6c933e23 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 29-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AM460_RS07320 33e7dc7d11d7b539319895ea6c933e23 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.455 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM460_RS07320 33e7dc7d11d7b539319895ea6c933e23 142 SUPERFAMILY SSF52161 1 140 1.83E-60 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM460_RS07320 33e7dc7d11d7b539319895ea6c933e23 142 Gene3D G3DSA:3.90.1180.10 1 142 1.4E-62 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 PIRSF PIRSF000097 115 276 1.0E-24 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 PIRSF PIRSF000097 1 122 6.5E-18 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 Pfam PF00248 Aldo/keto reductase family 17 271 6.5E-56 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 PRINTS PR00069 Aldo-keto reductase signature 127 144 3.1E-19 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 3.1E-19 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 PRINTS PR00069 Aldo-keto reductase signature 97 115 3.1E-19 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 PRINTS PR00069 Aldo-keto reductase signature 41 65 3.1E-19 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 Gene3D G3DSA:3.20.20.100 2 284 3.9E-82 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS16090 04263e3f70ebc14948679d07cfcccd1b 284 SUPERFAMILY SSF51430 4 273 1.27E-78 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM460_RS17930 1db0194475dd63e06942d321a4e07041 187 Pfam PF01713 Smr domain 89 169 5.1E-18 T 29-03-2018 IPR002625 Smr domain AM460_RS17930 1db0194475dd63e06942d321a4e07041 187 SMART SM00463 85 169 2.5E-17 T 29-03-2018 IPR002625 Smr domain AM460_RS17930 1db0194475dd63e06942d321a4e07041 187 SUPERFAMILY SSF160443 86 169 6.28E-12 T 29-03-2018 IPR002625 Smr domain AM460_RS23115 bc349f7f8df2734ffd8537ed0b956f81 246 Gene3D G3DSA:1.10.3720.10 17 239 9.9E-39 T 29-03-2018 AM460_RS23115 bc349f7f8df2734ffd8537ed0b956f81 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 238 4.0E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS23115 bc349f7f8df2734ffd8537ed0b956f81 246 SUPERFAMILY SSF161098 24 223 1.1E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS23115 bc349f7f8df2734ffd8537ed0b956f81 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 3.4E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS03665 01cbfc279f6e511bfff29b8ae44df1e2 302 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 29-03-2018 IPR033140 Lipase, GDXG, putative serine active site AM460_RS03665 01cbfc279f6e511bfff29b8ae44df1e2 302 SUPERFAMILY SSF53474 25 297 4.15E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS03665 01cbfc279f6e511bfff29b8ae44df1e2 302 Gene3D G3DSA:3.40.50.1820 2 299 6.7E-57 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS03665 01cbfc279f6e511bfff29b8ae44df1e2 302 Pfam PF07859 alpha/beta hydrolase fold 75 280 3.1E-65 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM460_RS21040 ceef2887890ca5e32a08853ca226c687 589 Pfam PF00665 Integrase core domain 152 298 1.0E-13 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS21040 ceef2887890ca5e32a08853ca226c687 589 SUPERFAMILY SSF53098 149 163 7.81E-15 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS21040 ceef2887890ca5e32a08853ca226c687 589 SUPERFAMILY SSF53098 193 335 7.81E-15 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS21040 ceef2887890ca5e32a08853ca226c687 589 Gene3D G3DSA:1.10.10.60 7 50 9.3E-4 T 29-03-2018 AM460_RS21040 ceef2887890ca5e32a08853ca226c687 589 Gene3D G3DSA:3.30.420.10 146 355 5.4E-29 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS18110 e9921b39277c0b42ae747f7a86edb6b4 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.1E-33 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM460_RS18110 e9921b39277c0b42ae747f7a86edb6b4 74 Pfam PF06667 Phage shock protein B 3 73 2.2E-32 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM460_RS24060 59f4d82cd10395502e6959ccb0935bc9 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 116 3.3E-64 T 29-03-2018 IPR019693 Biofilm formation regulator YbaJ AM460_RS21975 5464ab47388d568dfa0b3666f02a4dce 171 Pfam PF12883 Protein of unknown function (DUF3828) 40 154 1.7E-27 T 29-03-2018 IPR024289 Domain of unknown function DUF3828 AM460_RS17480 07e6492c255a0b650400bb99932324d2 143 SUPERFAMILY SSF82784 1 141 9.29E-42 T 29-03-2018 IPR003718 OsmC/Ohr family AM460_RS17480 07e6492c255a0b650400bb99932324d2 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 2.2E-61 T 29-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AM460_RS17480 07e6492c255a0b650400bb99932324d2 143 Gene3D G3DSA:3.30.300.20 2 143 3.6E-30 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM460_RS17480 07e6492c255a0b650400bb99932324d2 143 Pfam PF02566 OsmC-like protein 43 138 5.0E-19 T 29-03-2018 IPR003718 OsmC/Ohr family AM460_RS06000 ceb8758756df0a3839c2eed1a771f994 268 SUPERFAMILY SSF52540 4 237 1.03E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06000 ceb8758756df0a3839c2eed1a771f994 268 SMART SM00382 37 229 1.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06000 ceb8758756df0a3839c2eed1a771f994 268 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS06000 ceb8758756df0a3839c2eed1a771f994 268 Gene3D G3DSA:3.40.50.300 1 251 3.0E-68 T 29-03-2018 AM460_RS06000 ceb8758756df0a3839c2eed1a771f994 268 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 266 1.4E-136 T 29-03-2018 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 AM460_RS06000 ceb8758756df0a3839c2eed1a771f994 268 Pfam PF00005 ABC transporter 28 179 6.0E-38 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS26210 c7350360ff6ad1d6898067a09b530445 504 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 500 5.2E-115 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM460_RS26210 c7350360ff6ad1d6898067a09b530445 504 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS26210 c7350360ff6ad1d6898067a09b530445 504 Hamap MF_01049 L-carnitine/gamma-butyrobetaine antiporter [caiT]. 1 504 63.055 T 29-03-2018 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT GO:0016020|GO:0044667|GO:1900749|GO:1900751 AM460_RS26210 c7350360ff6ad1d6898067a09b530445 504 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 501 6.9E-169 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM460_RS04045 d93e247536aca2feb38113c4775eb215 340 SUPERFAMILY SSF53474 17 329 1.87E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS04045 d93e247536aca2feb38113c4775eb215 340 Gene3D G3DSA:3.40.50.1820 24 339 3.6E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS04045 d93e247536aca2feb38113c4775eb215 340 Pfam PF12146 Serine aminopeptidase, S33 52 312 4.3E-58 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM460_RS14270 6967d912c987e64a69dc9bb9a3576ffa 60 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 54 4.5E-13 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM460_RS14270 6967d912c987e64a69dc9bb9a3576ffa 60 SUPERFAMILY SSF52540 2 54 9.77E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14270 6967d912c987e64a69dc9bb9a3576ffa 60 Gene3D G3DSA:3.40.50.300 1 56 4.1E-8 T 29-03-2018 AM460_RS09485 cbed72bc240e7d495e4f34f33e72f2db 147 SUPERFAMILY SSF55804 1 145 4.45E-34 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS09485 cbed72bc240e7d495e4f34f33e72f2db 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 5.1E-28 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM460_RS09485 cbed72bc240e7d495e4f34f33e72f2db 147 Gene3D G3DSA:3.40.930.10 1 147 5.2E-30 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM460_RS06965 e6c0a669ae4b6ddca275f2f80ecef2fd 72 Pfam PF03889 Domain of unknown function 9 45 9.6E-23 T 29-03-2018 IPR005589 Protein of unknown function DUF331 AM460_RS24595 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 1 313 54.711 T 29-03-2018 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690 AM460_RS24595 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 SUPERFAMILY SSF53213 5 185 9.42E-71 T 29-03-2018 AM460_RS24595 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 SUPERFAMILY SSF53213 230 310 9.42E-71 T 29-03-2018 AM460_RS24595 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 Gene3D G3DSA:3.40.830.10 3 314 1.2E-46 T 29-03-2018 AM460_RS24595 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 306 1.7E-91 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM460_RS27145 8113be99fda2592d95fa66c9252e1825 239 Pfam PF06952 PsiA protein 2 235 1.0E-78 T 29-03-2018 IPR009713 Uncharacterised protein family PsiA AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 Pfam PF00267 Gram-negative porin 27 371 2.0E-120 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 SUPERFAMILY SSF56935 22 371 9.46E-72 T 29-03-2018 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 226 238 3.8E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 3.8E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 324 341 3.8E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 55 66 3.8E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 3.8E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 54 72 4.6E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 4.6E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.6E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 232 249 4.6E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 4.6E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 4.6E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM460_RS14815 f1c06bd1fbb1a3997b7079385d1e527c 371 Gene3D G3DSA:2.40.160.10 31 371 3.6E-50 T 29-03-2018 AM460_RS23170 195e3eebb8f0043dc7198a619ee16f5c 193 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 26.199 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM460_RS23170 195e3eebb8f0043dc7198a619ee16f5c 193 Gene3D G3DSA:3.30.160.150 19 173 9.5E-45 T 29-03-2018 AM460_RS23170 195e3eebb8f0043dc7198a619ee16f5c 193 Pfam PF04390 Lipopolysaccharide-assembly 42 159 6.3E-14 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM460_RS25205 a4d7e5f833266e5f0810ef37fa546aca 157 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 39 152 3.9E-34 T 29-03-2018 AM460_RS25205 a4d7e5f833266e5f0810ef37fa546aca 157 SUPERFAMILY SSF89872 31 156 1.16E-49 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM460_RS25205 a4d7e5f833266e5f0810ef37fa546aca 157 PIRSF PIRSF009103 1 154 1.9E-57 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM460_RS25205 a4d7e5f833266e5f0810ef37fa546aca 157 Gene3D G3DSA:3.40.1420.10 33 151 5.7E-42 T 29-03-2018 AM460_RS01480 d14ba95667ec939b3c82f5d87a3b9a28 128 Gene3D G3DSA:3.30.1330.40 1 128 4.8E-46 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS01480 d14ba95667ec939b3c82f5d87a3b9a28 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 7.7E-54 T 29-03-2018 IPR006056 RidA family AM460_RS01480 d14ba95667ec939b3c82f5d87a3b9a28 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 2.1E-45 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM460_RS01480 d14ba95667ec939b3c82f5d87a3b9a28 128 SUPERFAMILY SSF55298 4 127 6.28E-44 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM460_RS01480 d14ba95667ec939b3c82f5d87a3b9a28 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 29-03-2018 IPR019897 RidA, conserved site AM460_RS01315 e1df9a3df03c26140674ead4d54afc94 337 SUPERFAMILY SSF53659 4 332 2.58E-85 T 29-03-2018 AM460_RS01315 e1df9a3df03c26140674ead4d54afc94 337 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 326 9.6E-81 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS01315 e1df9a3df03c26140674ead4d54afc94 337 Gene3D G3DSA:3.40.718.10 1 335 4.9E-102 T 29-03-2018 AM460_RS01315 e1df9a3df03c26140674ead4d54afc94 337 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 330 28.961 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM460_RS16840 ade1de89356f3fb0fdfeb811661f044d 670 Pfam PF04632 Fusaric acid resistance protein family 20 662 1.5E-175 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM460_RS09925 cc296baae223c84f4e4413e8cfb5b0db 397 SUPERFAMILY SSF103473 16 396 3.92E-21 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS09925 cc296baae223c84f4e4413e8cfb5b0db 397 Gene3D G3DSA:1.20.1250.20 2 191 2.0E-12 T 29-03-2018 AM460_RS09925 cc296baae223c84f4e4413e8cfb5b0db 397 Pfam PF07690 Major Facilitator Superfamily 20 354 6.8E-13 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS09925 cc296baae223c84f4e4413e8cfb5b0db 397 Gene3D G3DSA:1.20.1250.20 202 397 2.5E-5 T 29-03-2018 AM460_RS09925 cc296baae223c84f4e4413e8cfb5b0db 397 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.428 T 29-03-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 AM460_RS16790 9e5e4071a9d1b9e3765784083543f591 115 SUPERFAMILY SSF52833 2 104 1.99E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS16790 9e5e4071a9d1b9e3765784083543f591 115 PIRSF PIRSF005894 1 108 1.2E-52 T 29-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AM460_RS16790 9e5e4071a9d1b9e3765784083543f591 115 Gene3D G3DSA:3.40.30.10 3 115 1.8E-30 T 29-03-2018 AM460_RS16790 9e5e4071a9d1b9e3765784083543f591 115 Pfam PF00462 Glutaredoxin 17 81 1.8E-18 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM460_RS16790 9e5e4071a9d1b9e3765784083543f591 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.7E-47 T 29-03-2018 IPR004480 Monothiol glutaredoxin-related AM460_RS27930 7f0c19aa7f325ff5bb5b9fbb49e66de8 289 Pfam PF02387 IncFII RepA protein family 16 268 5.5E-34 T 29-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 AM460_RS27930 7f0c19aa7f325ff5bb5b9fbb49e66de8 289 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 13 287 1.1E-174 T 29-03-2018 IPR017837 Plasmid replication initiator, RepA, IncFII type AM460_RS08495 1f7d2271e7d42d6326f76b8cdddd6cf6 308 Gene3D G3DSA:3.10.450.50 42 164 0.16 T 29-03-2018 AM460_RS08495 1f7d2271e7d42d6326f76b8cdddd6cf6 308 Pfam PF12883 Protein of unknown function (DUF3828) 241 286 0.0031 T 29-03-2018 IPR024289 Domain of unknown function DUF3828 AM460_RS08495 1f7d2271e7d42d6326f76b8cdddd6cf6 308 Pfam PF12883 Protein of unknown function (DUF3828) 25 143 2.4E-31 T 29-03-2018 IPR024289 Domain of unknown function DUF3828 AM460_RS08495 1f7d2271e7d42d6326f76b8cdddd6cf6 308 Gene3D G3DSA:3.10.450.50 165 288 0.06 T 29-03-2018 AM460_RS23895 287d391c93e61aa26fd927f151e3ceeb 430 Pfam PF13520 Amino acid permease 13 395 1.7E-29 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS23895 287d391c93e61aa26fd927f151e3ceeb 430 PIRSF PIRSF006060 1 429 6.8E-49 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS26845 9b5c04135851874a4197831abb401e9c 140 Pfam PF07128 Protein of unknown function (DUF1380) 1 98 1.0E-10 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 AM460_RS19465 8499815a26031462c0e10ff85a5484af 120 Gene3D G3DSA:2.160.20.20 1 114 0.0011 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like AM460_RS18470 c3868397ee987d02cfe62d3d65fe7e2a 226 Pfam PF06805 Bacteriophage lambda tail assembly protein I 15 97 7.4E-21 T 29-03-2018 IPR010654 Bacteriophage lambda tail assembly I AM460_RS18145 878b109420966c2cf9bdd1ebf17f28a6 321 Gene3D G3DSA:1.10.3720.10 4 303 9.6E-43 T 29-03-2018 AM460_RS18145 878b109420966c2cf9bdd1ebf17f28a6 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 5.0E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18145 878b109420966c2cf9bdd1ebf17f28a6 321 SUPERFAMILY SSF161098 72 138 3.66E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18145 878b109420966c2cf9bdd1ebf17f28a6 321 SUPERFAMILY SSF161098 178 300 3.66E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS10855 d01e399c115a991567a6abfe66f1f793 512 Pfam PF07690 Major Facilitator Superfamily 19 413 1.5E-53 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS10855 d01e399c115a991567a6abfe66f1f793 512 Gene3D G3DSA:1.20.1250.20 255 503 1.3E-31 T 29-03-2018 AM460_RS10855 d01e399c115a991567a6abfe66f1f793 512 Gene3D G3DSA:1.20.1250.20 13 203 9.3E-34 T 29-03-2018 AM460_RS10855 d01e399c115a991567a6abfe66f1f793 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 9.6E-220 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM460_RS10855 d01e399c115a991567a6abfe66f1f793 512 SUPERFAMILY SSF103473 475 500 4.97E-71 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10855 d01e399c115a991567a6abfe66f1f793 512 SUPERFAMILY SSF103473 9 196 4.97E-71 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10855 d01e399c115a991567a6abfe66f1f793 512 SUPERFAMILY SSF103473 251 423 4.97E-71 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS27640 cd4c020f34d42849658854f42a959d43 140 Pfam PF07128 Protein of unknown function (DUF1380) 1 98 4.2E-12 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 AM460_RS27640 cd4c020f34d42849658854f42a959d43 140 Gene3D G3DSA:3.20.20.60 21 139 3.5E-4 T 29-03-2018 AM460_RS03575 931f1c61c342bfc92d80ad515f11a987 464 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 2.9E-13 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain AM460_RS03575 931f1c61c342bfc92d80ad515f11a987 464 Pfam PF16966 Porin-like glycoporin RafY 104 464 2.2E-168 T 29-03-2018 IPR016963 Glycoporin RafY AM460_RS03575 931f1c61c342bfc92d80ad515f11a987 464 SUPERFAMILY SSF56935 101 461 6.96E-7 T 29-03-2018 AM460_RS03575 931f1c61c342bfc92d80ad515f11a987 464 PIRSF PIRSF030989 2 464 5.6E-271 T 29-03-2018 IPR016963 Glycoporin RafY AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 Pfam PF10135 Rod binding protein 50 97 1.1E-17 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 SMART SM00047 142 306 1.9E-73 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 113 138 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 295 312 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 4.1E-180 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.7E-20 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 Gene3D G3DSA:1.10.530.10 146 298 3.1E-34 T 29-03-2018 AM460_RS20160 c84e4b851509c43aedabc98e23cbba60 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 295 1.4E-131 T 29-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AM460_RS01095 38539023b19b178da467aaa6aa6aac5d 135 Pfam PF11682 Probable zinc-ribbon 6 124 2.2E-19 T 29-03-2018 IPR021696 Protein of unknown function DUF3279 AM460_RS07955 fa1a4201301f9503dd5d51aa06fb8a10 101 Gene3D G3DSA:1.20.5.1230 4 85 6.1E-4 T 29-03-2018 AM460_RS07955 fa1a4201301f9503dd5d51aa06fb8a10 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 6.0E-31 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM460_RS21660 98f656872d25379e8ef80bb5647e67ba 348 Pfam PF04860 Phage portal protein 91 346 5.8E-16 T 29-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM460_RS21660 98f656872d25379e8ef80bb5647e67ba 348 PIRSF PIRSF018494 1 348 3.3E-148 T 29-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AM460_RS21660 98f656872d25379e8ef80bb5647e67ba 348 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 54 334 1.3E-64 T 29-03-2018 IPR006430 Phage portal protein PBSX family AM460_RS20785 7ef192d18207f3ae3de951d95796233a 546 Gene3D G3DSA:1.20.120.330 400 538 2.8E-5 T 29-03-2018 AM460_RS20785 7ef192d18207f3ae3de951d95796233a 546 Pfam PF02470 MlaD protein 159 217 1.5E-7 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS20785 7ef192d18207f3ae3de951d95796233a 546 Pfam PF02470 MlaD protein 285 389 1.3E-14 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS20785 7ef192d18207f3ae3de951d95796233a 546 Pfam PF02470 MlaD protein 42 133 5.4E-9 T 29-03-2018 IPR003399 Mce/MlaD AM460_RS19035 23dabdc1f7b29d403410cecaf3216426 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.687 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM460_RS19035 23dabdc1f7b29d403410cecaf3216426 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 206 8.9E-100 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM460_RS19035 23dabdc1f7b29d403410cecaf3216426 207 Pfam PF03550 Outer membrane lipoprotein LolB 50 204 1.8E-49 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM460_RS19035 23dabdc1f7b29d403410cecaf3216426 207 Gene3D G3DSA:2.50.20.10 30 207 2.5E-55 T 29-03-2018 AM460_RS19035 23dabdc1f7b29d403410cecaf3216426 207 SUPERFAMILY SSF89392 31 206 1.29E-56 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM460_RS19610 cc660f9f9371e5b2bb72a1d9491b04ce 232 Pfam PF05100 Phage minor tail protein L 29 230 3.3E-99 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM460_RS19610 cc660f9f9371e5b2bb72a1d9491b04ce 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 1.6E-99 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM460_RS09300 2dadaa7c268046f83dd95c284d591c39 418 Gene3D G3DSA:1.20.1250.20 5 194 5.3E-8 T 29-03-2018 AM460_RS09300 2dadaa7c268046f83dd95c284d591c39 418 SUPERFAMILY SSF103473 9 406 4.45E-32 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS09300 2dadaa7c268046f83dd95c284d591c39 418 Pfam PF03825 Nucleoside H+ symporter 1 406 1.4E-188 T 29-03-2018 AM460_RS09300 2dadaa7c268046f83dd95c284d591c39 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 3.2E-225 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AM460_RS09300 2dadaa7c268046f83dd95c284d591c39 418 Gene3D G3DSA:1.20.1250.20 199 409 5.2E-20 T 29-03-2018 AM460_RS09300 2dadaa7c268046f83dd95c284d591c39 418 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 47.458 T 29-03-2018 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 Pfam PF01259 SAICAR synthetase 7 230 1.5E-58 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 7.4E-86 T 29-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 Gene3D G3DSA:3.30.470.20 94 220 8.1E-46 T 29-03-2018 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 SUPERFAMILY SSF56104 3 232 9.81E-76 T 29-03-2018 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 Gene3D G3DSA:3.30.200.20 1 93 4.1E-24 T 29-03-2018 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.976 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS11990 b3550340b861a18dbbd2e853824eb6ea 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM460_RS12280 e8132fc59933e17a715e753771c482b7 332 PIRSF PIRSF026166 1 332 5.1E-137 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter AM460_RS12280 e8132fc59933e17a715e753771c482b7 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 3.0E-103 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter AM460_RS17170 b019417d6a61a11503def38effbf74b1 101 Pfam PF06649 Protein of unknown function (DUF1161) 26 79 4.1E-22 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 AM460_RS17170 b019417d6a61a11503def38effbf74b1 101 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 79 1.0E-38 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 AM460_RS10315 052b2c2a3e578e2793ec2e73240547b9 260 SUPERFAMILY SSF55120 2 238 3.2E-61 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS10315 052b2c2a3e578e2793ec2e73240547b9 260 Gene3D G3DSA:3.30.2350.10 1 237 2.3E-60 T 29-03-2018 AM460_RS10315 052b2c2a3e578e2793ec2e73240547b9 260 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS10315 052b2c2a3e578e2793ec2e73240547b9 260 Pfam PF00849 RNA pseudouridylate synthase 11 170 2.0E-28 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM460_RS14495 05ed92864f39a446c1ebf5f9c76f3d3a 133 Pfam PF11682 Probable zinc-ribbon 4 122 1.6E-19 T 29-03-2018 IPR021696 Protein of unknown function DUF3279 AM460_RS12830 3dd787aa486f1355b79edc973af76c63 214 Gene3D G3DSA:3.40.30.10 1 103 1.4E-21 T 29-03-2018 AM460_RS12830 3dd787aa486f1355b79edc973af76c63 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 3.5E-71 T 29-03-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AM460_RS12830 3dd787aa486f1355b79edc973af76c63 214 SUPERFAMILY SSF52833 13 87 4.99E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS12830 3dd787aa486f1355b79edc973af76c63 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 86 5.2E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM460_RS12830 3dd787aa486f1355b79edc973af76c63 214 SUPERFAMILY SSF47616 90 207 1.38E-9 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM460_RS12830 3dd787aa486f1355b79edc973af76c63 214 Gene3D G3DSA:1.20.1050.10 104 205 5.2E-13 T 29-03-2018 AM460_RS17355 4ba97c328be2deafa82bbf751f596d46 252 SUPERFAMILY SSF53335 22 239 1.7E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS17355 4ba97c328be2deafa82bbf751f596d46 252 Gene3D G3DSA:1.10.150.290 177 230 5.6E-28 T 29-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM460_RS17355 4ba97c328be2deafa82bbf751f596d46 252 Pfam PF13649 Methyltransferase domain 35 124 2.0E-15 T 29-03-2018 AM460_RS17355 4ba97c328be2deafa82bbf751f596d46 252 Gene3D G3DSA:3.40.50.150 10 176 9.5E-24 T 29-03-2018 AM460_RS17355 4ba97c328be2deafa82bbf751f596d46 252 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 47.812 T 29-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM460_RS16315 34dd62a4996acbdbf4f642f068dc8144 112 Pfam PF04355 SmpA / OmlA family 33 96 4.1E-11 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM460_RS16315 34dd62a4996acbdbf4f642f068dc8144 112 Gene3D G3DSA:3.30.1450.10 28 104 1.2E-5 T 29-03-2018 AM460_RS15170 783ece5c6eb7ba00f6b7bdefffd5ff50 76 SUPERFAMILY SSF47413 14 63 5.91E-7 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS15170 783ece5c6eb7ba00f6b7bdefffd5ff50 76 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 6 65 3.3E-12 T 29-03-2018 IPR031856 Putative bacterial antitoxin YdaS AM460_RS15170 783ece5c6eb7ba00f6b7bdefffd5ff50 76 Gene3D G3DSA:1.10.260.40 1 76 5.4E-12 T 29-03-2018 AM460_RS19740 4108d06da1c4a81e7fc5e436690a56cd 229 ProDom PD038144 ANTITERMINATOR Q PROPHAGE TRANSCRIPTION ANTITERMINATION CP-933P GIFSY-1 ENCODED BY Q-LIKE 1 217 2.0E-114 T 29-03-2018 IPR010455 Bacteriophage 82, GpQ AM460_RS19740 4108d06da1c4a81e7fc5e436690a56cd 229 PIRSF PIRSF004417 1 229 9.4E-122 T 29-03-2018 IPR010455 Bacteriophage 82, GpQ AM460_RS19740 4108d06da1c4a81e7fc5e436690a56cd 229 Pfam PF06323 Phage antitermination protein Q 4 218 2.5E-87 T 29-03-2018 IPR010455 Bacteriophage 82, GpQ AM460_RS21370 60f62993b2b58a9d87d1a76972452e5a 302 Pfam PF04865 Baseplate J-like protein 118 261 2.6E-25 T 29-03-2018 IPR006949 Baseplate protein J-like AM460_RS21370 60f62993b2b58a9d87d1a76972452e5a 302 PIRSF PIRSF020481 1 302 2.1E-130 T 29-03-2018 IPR014507 Baseplate assembly protein J, predicted AM460_RS20410 a984b378e4d84395ec8ec7d2833e83ef 245 SMART SM00481 4 78 6.3E-21 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM460_RS20410 a984b378e4d84395ec8ec7d2833e83ef 245 Pfam PF02811 PHP domain 5 80 1.4E-8 T 29-03-2018 IPR004013 PHP domain GO:0003824 AM460_RS20410 a984b378e4d84395ec8ec7d2833e83ef 245 Gene3D G3DSA:3.20.20.140 1 245 1.1E-39 T 29-03-2018 AM460_RS20410 a984b378e4d84395ec8ec7d2833e83ef 245 SUPERFAMILY SSF89550 3 241 5.49E-64 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM460_RS20410 a984b378e4d84395ec8ec7d2833e83ef 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 52.21 T 29-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AM460_RS25615 09033ffc7645ddc9c66d5ae2124474c1 159 SUPERFAMILY SSF55083 1 150 9.42E-54 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM460_RS25615 09033ffc7645ddc9c66d5ae2124474c1 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 5.7E-36 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM460_RS25615 09033ffc7645ddc9c66d5ae2124474c1 159 Gene3D G3DSA:3.30.70.560 1 157 2.5E-55 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM460_RS25615 09033ffc7645ddc9c66d5ae2124474c1 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.3E-47 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM460_RS25615 09033ffc7645ddc9c66d5ae2124474c1 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM460_RS04625 d4463e91020492cbda78c48d062c9c53 445 Pfam PF00860 Permease family 31 404 2.7E-42 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS04625 d4463e91020492cbda78c48d062c9c53 445 PIRSF PIRSF005353 5 444 3.5E-177 T 29-03-2018 IPR026033 Purine permease PbuG-like AM460_RS22780 93ff73076ef417d50669e5be6ee7b98f 103 SMART SM00858 12 83 3.1E-10 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS22780 93ff73076ef417d50669e5be6ee7b98f 103 Pfam PF08666 SAF domain 12 82 1.7E-14 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS22065 8a51f12ff0ff6f351a5087b594abfae7 125 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 118 7.0E-61 T 29-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 AM460_RS22065 8a51f12ff0ff6f351a5087b594abfae7 125 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 3 117 2.6E-46 T 29-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 AM460_RS10875 9570ebfc5e444fe17387a2c51dcca55f 245 Pfam PF03591 AzlC protein 24 165 1.5E-37 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease AM460_RS24480 48eca8134a8510ca6323f54c8427d41e 70 Pfam PF10953 Protein of unknown function (DUF2754) 1 70 1.3E-47 T 29-03-2018 IPR020490 Uncharacterised protein family YaiZ AM460_RS24480 48eca8134a8510ca6323f54c8427d41e 70 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 1 70 1.0E-34 T 29-03-2018 IPR020490 Uncharacterised protein family YaiZ AM460_RS21490 42d117316d03565ef19353a0ed6ac284 100 Pfam PF17399 Domain of unknown function (DUF5405) 10 95 3.1E-28 T 29-03-2018 IPR035404 Domain of unknown function DUF5405 AM460_RS21490 42d117316d03565ef19353a0ed6ac284 100 ProDom PD067735 GP81 ORF2 GPA 5'REGION ORF81 1 99 1.0E-47 T 29-03-2018 AM460_RS13655 7fc6198ad0e72c7774675f8752b6dd6b 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 1.5E-110 T 29-03-2018 IPR005261 Conserved hypothetical protein CHP00659 AM460_RS13655 7fc6198ad0e72c7774675f8752b6dd6b 231 Pfam PF04172 LrgB-like family 12 224 1.2E-79 T 29-03-2018 IPR007300 CidB/LrgB family AM460_RS26755 9305c25d04fd1c45fd6b40600733c6da 83 Gene3D G3DSA:1.10.260.40 1 83 5.0E-7 T 29-03-2018 AM460_RS26755 9305c25d04fd1c45fd6b40600733c6da 83 SUPERFAMILY SSF47413 1 50 4.5E-7 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS20085 735606a827754faf7d8ada40a20f3ef2 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 4.9E-114 T 29-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AM460_RS20085 735606a827754faf7d8ada40a20f3ef2 269 SUPERFAMILY SSF56752 2 264 3.53E-70 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM460_RS20085 735606a827754faf7d8ada40a20f3ef2 269 Gene3D G3DSA:3.20.10.10 113 258 6.5E-35 T 29-03-2018 AM460_RS20085 735606a827754faf7d8ada40a20f3ef2 269 Gene3D G3DSA:3.30.470.10 1 110 1.2E-20 T 29-03-2018 AM460_RS20085 735606a827754faf7d8ada40a20f3ef2 269 Pfam PF01063 Amino-transferase class IV 24 246 1.3E-49 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM460_RS20085 735606a827754faf7d8ada40a20f3ef2 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM460_RS18105 f54267821097bf2da5d53969cd3631b0 119 Pfam PF04024 PspC domain 8 65 2.8E-15 T 29-03-2018 IPR007168 Phage shock protein, PspC, N-terminal AM460_RS18105 f54267821097bf2da5d53969cd3631b0 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 2.4E-40 T 29-03-2018 IPR014320 Phage shock protein, PspC AM460_RS06415 74260635562ed71b8a2aed75a93f61d7 402 Pfam PF01385 Probable transposase 162 275 1.4E-30 T 29-03-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM460_RS06415 74260635562ed71b8a2aed75a93f61d7 402 Pfam PF12323 Helix-turn-helix domain 4 48 4.5E-13 T 29-03-2018 IPR021027 Transposase, putative, helix-turn-helix domain AM460_RS06415 74260635562ed71b8a2aed75a93f61d7 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 6.9E-10 T 29-03-2018 IPR010095 Transposase IS605, OrfB, C-terminal AM460_RS06415 74260635562ed71b8a2aed75a93f61d7 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 1.0E-23 T 29-03-2018 IPR010095 Transposase IS605, OrfB, C-terminal AM460_RS05360 a7e4b90d23e4bcee825f3eae1ca132b0 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 419 1.9E-152 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS05360 a7e4b90d23e4bcee825f3eae1ca132b0 425 PIRSF PIRSF006066 1 425 8.0E-140 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM460_RS05360 a7e4b90d23e4bcee825f3eae1ca132b0 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 1.9E-128 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM460_RS11785 accd0ca69c269651ac3cf11b8331f2ad 258 Pfam PF07179 SseB protein N-terminal domain 8 119 1.4E-27 T 29-03-2018 IPR009839 SseB protein N-terminal domain AM460_RS11785 accd0ca69c269651ac3cf11b8331f2ad 258 Pfam PF14581 SseB protein C-terminal domain 137 243 4.3E-30 T 29-03-2018 IPR027945 SseB protein, C-terminal AM460_RS25080 284b950588583588130af7e86ffbb75c 133 Pfam PF07417 Transcriptional regulator Crl 5 122 2.7E-54 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AM460_RS25080 284b950588583588130af7e86ffbb75c 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.458 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AM460_RS05115 6d9d9ec0f5739ca7a65599bf2702536a 339 Gene3D G3DSA:3.90.550.10 29 312 2.3E-44 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS05115 6d9d9ec0f5739ca7a65599bf2702536a 339 Pfam PF08437 Glycosyl transferase family 8 C-terminal 280 336 4.7E-22 T 29-03-2018 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 AM460_RS05115 6d9d9ec0f5739ca7a65599bf2702536a 339 SUPERFAMILY SSF53448 30 300 3.09E-60 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS05115 6d9d9ec0f5739ca7a65599bf2702536a 339 Pfam PF01501 Glycosyl transferase family 8 31 277 1.9E-66 T 29-03-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 AM460_RS06260 33aa709e88b48bcca5492d39a3f5cdd7 505 Pfam PF12849 PBP superfamily domain 250 484 3.0E-23 T 29-03-2018 IPR024370 PBP domain AM460_RS06260 33aa709e88b48bcca5492d39a3f5cdd7 505 Gene3D G3DSA:3.40.190.10 378 505 1.9E-17 T 29-03-2018 AM460_RS06260 33aa709e88b48bcca5492d39a3f5cdd7 505 Gene3D G3DSA:3.40.190.10 247 377 1.0E-21 T 29-03-2018 AM460_RS06260 33aa709e88b48bcca5492d39a3f5cdd7 505 SUPERFAMILY SSF53850 248 502 2.06E-51 T 29-03-2018 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 5.2E-17 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 5.2E-17 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 5.2E-17 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 5.2E-17 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 SUPERFAMILY SSF51569 2 297 5.02E-83 T 29-03-2018 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 SMART SM01130 4 298 3.3E-93 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 PIRSF PIRSF001365 1 299 7.5E-79 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 Pfam PF00701 Dihydrodipicolinate synthetase family 5 296 4.3E-80 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 Gene3D G3DSA:3.20.20.70 1 299 1.8E-83 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS01325 28aafffe705b4ca5637b4d814aae9c67 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM460_RS27490 6ba8b8704e11dcea7e1b43b0466862e9 483 Pfam PF03743 Bacterial conjugation TrbI-like protein 213 409 1.0E-30 T 29-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM460_RS13890 578762ac8a09bad2b6f40f57e00af87d 334 SUPERFAMILY SSF101478 3 326 5.75E-68 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 AM460_RS13890 578762ac8a09bad2b6f40f57e00af87d 334 Gene3D G3DSA:1.10.4080.10 1 331 4.4E-67 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 AM460_RS13890 578762ac8a09bad2b6f40f57e00af87d 334 Pfam PF03747 ADP-ribosylglycohydrolase 8 302 1.3E-60 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 AM460_RS13475 cee9c36dcf7a0126726239baa78e0126 328 SMART SM00833 240 323 4.8E-5 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM460_RS13475 cee9c36dcf7a0126726239baa78e0126 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 8.6E-6 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM460_RS13475 cee9c36dcf7a0126726239baa78e0126 328 Gene3D G3DSA:3.40.50.300 1 194 3.9E-30 T 29-03-2018 AM460_RS13475 cee9c36dcf7a0126726239baa78e0126 328 SUPERFAMILY SSF52540 6 170 4.7E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS13475 cee9c36dcf7a0126726239baa78e0126 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 171 1.8E-39 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM460_RS18530 3f0d457e9c6385b9317a718e49d61b71 861 Gene3D G3DSA:2.10.10.20 805 852 1.2E-6 T 29-03-2018 AM460_RS18530 3f0d457e9c6385b9317a718e49d61b71 861 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 45 388 7.6E-105 T 29-03-2018 IPR006427 Phage portal protein, HK97 AM460_RS18530 3f0d457e9c6385b9317a718e49d61b71 861 Pfam PF04860 Phage portal protein 54 382 8.8E-73 T 29-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM460_RS18530 3f0d457e9c6385b9317a718e49d61b71 861 Gene3D G3DSA:3.20.20.120 393 626 0.0018 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM460_RS26625 6ca0cf39d15dc648278632adc6f8b6e7 230 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 51 224 3.5E-40 T 29-03-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component AM460_RS17450 1b871d1f40e9285dc4ba2952236a8de9 511 Pfam PF13520 Amino acid permease 13 451 2.5E-56 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS17450 1b871d1f40e9285dc4ba2952236a8de9 511 TIGRFAM TIGR00910 2A0307_GadC: glutamate:gamma-aminobutyrate antiporter 1 511 0.0 T 29-03-2018 IPR004759 Glutamate:g-aminobutyrate antiporter GO:0006865|GO:0016021 AM460_RS17450 1b871d1f40e9285dc4ba2952236a8de9 511 PIRSF PIRSF006060 6 485 3.2E-67 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS20535 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 9.1E-10 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM460_RS20535 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 1.8E-9 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM460_RS15470 60dc0244e61b9d9d23b4a68998386248 167 SUPERFAMILY SSF47240 9 158 3.95E-35 T 29-03-2018 IPR009078 Ferritin-like superfamily AM460_RS15470 60dc0244e61b9d9d23b4a68998386248 167 Gene3D G3DSA:1.20.1260.10 3 162 1.2E-22 T 29-03-2018 IPR012347 Ferritin-related AM460_RS15470 60dc0244e61b9d9d23b4a68998386248 167 Pfam PF00210 Ferritin-like domain 9 142 8.7E-26 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM460_RS10690 3c750834f386e4a2c26db9452310f9aa 139 Pfam PF01381 Helix-turn-helix 85 138 8.0E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS10690 3c750834f386e4a2c26db9452310f9aa 139 SMART SM00530 84 138 9.4E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS10690 3c750834f386e4a2c26db9452310f9aa 139 SUPERFAMILY SSF47413 83 139 5.35E-7 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS10690 3c750834f386e4a2c26db9452310f9aa 139 Gene3D G3DSA:1.10.260.40 51 139 3.3E-9 T 29-03-2018 AM460_RS05975 b0d4d925c66a2ce82c51a902d8fad572 452 PIRSF PIRSF006304 8 451 2.3E-156 T 29-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 AM460_RS05975 b0d4d925c66a2ce82c51a902d8fad572 452 Pfam PF03611 PTS system sugar-specific permease component 14 397 4.1E-80 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.498 T 29-03-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 Gene3D G3DSA:1.20.1250.20 8 210 4.4E-25 T 29-03-2018 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 3.2E-138 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 Gene3D G3DSA:1.20.1250.20 263 496 4.6E-15 T 29-03-2018 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 Pfam PF00854 POT family 89 447 5.7E-94 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM460_RS16895 43bf67259fd328efe434c647102ba706 500 SUPERFAMILY SSF103473 15 212 4.45E-30 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS16895 43bf67259fd328efe434c647102ba706 500 SUPERFAMILY SSF103473 257 490 4.45E-30 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS23375 3382c1b2046ea0ca470e72034fd06b6c 209 SUPERFAMILY SSF110849 49 179 4.88E-26 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS23375 3382c1b2046ea0ca470e72034fd06b6c 209 SMART SM00470 51 146 1.1E-16 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS23375 3382c1b2046ea0ca470e72034fd06b6c 209 Pfam PF02195 ParB-like nuclease domain 52 145 1.0E-17 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM460_RS23375 3382c1b2046ea0ca470e72034fd06b6c 209 Gene3D G3DSA:3.90.1530.10 43 150 1.0E-12 T 29-03-2018 AM460_RS08340 829ccc807bb107b78bc485e05956cfac 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 6.0E-42 T 29-03-2018 IPR009659 Protein of unknown function DUF1249 AM460_RS18390 8c5da11594c87c92ae860130a34d322d 185 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 11 117 1.7E-23 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family AM460_RS18390 8c5da11594c87c92ae860130a34d322d 185 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 23 112 3.3E-26 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family AM460_RS25360 169e62e93b10efbfb4a835766e6dbd20 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 81 1.8E-28 T 29-03-2018 IPR009778 Modulator of Rho-dependent transcription termination AM460_RS25360 169e62e93b10efbfb4a835766e6dbd20 84 SUPERFAMILY SSF101744 1 83 1.05E-28 T 29-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AM460_RS25360 169e62e93b10efbfb4a835766e6dbd20 84 Gene3D G3DSA:2.30.30.400 8 81 1.0E-26 T 29-03-2018 AM460_RS26495 9618d1a1f6108debc061e12838c05ab4 186 Pfam PF01464 Transglycosylase SLT domain 41 165 1.5E-23 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS26495 9618d1a1f6108debc061e12838c05ab4 186 SUPERFAMILY SSF53955 39 171 4.16E-31 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS26495 9618d1a1f6108debc061e12838c05ab4 186 Gene3D G3DSA:1.10.530.10 27 174 2.5E-18 T 29-03-2018 AM460_RS00625 50cde4b1000417874626b8712887c1dc 453 Gene3D G3DSA:1.20.1250.20 247 452 2.9E-27 T 29-03-2018 AM460_RS00625 50cde4b1000417874626b8712887c1dc 453 Pfam PF07690 Major Facilitator Superfamily 47 408 6.2E-57 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS00625 50cde4b1000417874626b8712887c1dc 453 PIRSF PIRSF002808 28 452 4.1E-36 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM460_RS00625 50cde4b1000417874626b8712887c1dc 453 Gene3D G3DSA:1.20.1250.20 32 231 5.4E-38 T 29-03-2018 AM460_RS00625 50cde4b1000417874626b8712887c1dc 453 SUPERFAMILY SSF103473 31 448 3.53E-81 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS17720 879cdfd2ea8aa6b5ddf90f48d30bbd2a 197 Gene3D G3DSA:3.40.50.150 1 197 1.1E-33 T 29-03-2018 AM460_RS17720 879cdfd2ea8aa6b5ddf90f48d30bbd2a 197 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 1 196 7.1E-113 T 29-03-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 AM460_RS17720 879cdfd2ea8aa6b5ddf90f48d30bbd2a 197 SUPERFAMILY SSF53335 7 196 2.48E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM460_RS17720 879cdfd2ea8aa6b5ddf90f48d30bbd2a 197 Pfam PF03848 Tellurite resistance protein TehB 1 193 9.5E-110 T 29-03-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain AM460_RS01550 7ebd30623bbc48eed19992b69e1d1706 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 321 1.1E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS01550 7ebd30623bbc48eed19992b69e1d1706 341 Gene3D G3DSA:1.10.3470.10 41 327 8.4E-28 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS20635 ba88ee2c8ffa535d78ee61ad5a098427 30 Pfam PF08173 Membrane bound YbgT-like protein 1 25 2.5E-11 T 29-03-2018 IPR012994 Membrane bound YbgT-like AM460_RS12705 a37e7b3b98be530c6e89eba1570a5bb8 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 4.9E-81 T 29-03-2018 IPR007411 Elongation factor P hydroxylase AM460_RS14685 aadca3404d20ea8cd087b4474a0d4304 268 Pfam PF11924 Inverse autotransporter, beta-domain 187 244 3.9E-7 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain AM460_RS17955 859bf97517953512ea9ce7830129bd93 67 Pfam PF03806 AbgT putative transporter family 21 64 3.2E-14 T 29-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 SUPERFAMILY SSF56655 2 326 1.13E-111 T 29-03-2018 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.40.190.80 198 329 9.6E-57 T 29-03-2018 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.30.540.10 6 197 5.2E-62 T 29-03-2018 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF000904 1 331 7.8E-121 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 2.2E-83 T 29-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 1.4E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 1.4E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 1.4E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 1.4E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 1.4E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 1.4E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 29-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF500210 1 330 1.5E-124 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS01540 6dce545efd3bad72b609138fd3a8b0fe 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.949 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM460_RS07930 6293c420dfad8d665967becfb8557b49 122 Pfam PF05656 Protein of unknown function (DUF805) 11 117 4.1E-35 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM460_RS16645 6d476befb6b4d21585d8922a078ff378 138 SUPERFAMILY SSF82649 3 135 3.77E-45 T 29-03-2018 AM460_RS16645 6d476befb6b4d21585d8922a078ff378 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 9.0E-44 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AM460_RS16645 6d476befb6b4d21585d8922a078ff378 138 Gene3D G3DSA:3.90.1010.10 1 137 3.9E-48 T 29-03-2018 AM460_RS16645 6d476befb6b4d21585d8922a078ff378 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.626 T 29-03-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 AM460_RS26615 0cfb49d6a4f703a8e7362f59bb813259 1255 SMART SM00493 263 340 0.0034 T 29-03-2018 IPR006171 TOPRIM domain AM460_RS26615 0cfb49d6a4f703a8e7362f59bb813259 1255 Gene3D G3DSA:3.40.1360.10 249 379 2.2E-14 T 29-03-2018 AM460_RS21475 af6ef9237427b6dd5e6fc1b06b0fba44 761 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 133 462 7.1E-122 T 29-03-2018 IPR008766 Replication gene A protein GO:0006260 AM460_RS11035 bc70de81c6698f7684efba868728c58b 274 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 7 272 1.5E-92 T 29-03-2018 IPR019276 Protein of unkown function DUF2303 AM460_RS01320 1e503e110e97141bc664a9b2b47eb04b 505 Pfam PF08666 SAF domain 13 81 2.1E-15 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS01320 1e503e110e97141bc664a9b2b47eb04b 505 SMART SM00858 13 82 5.8E-16 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM460_RS01320 1e503e110e97141bc664a9b2b47eb04b 505 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 499 1.6E-155 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AM460_RS19685 5283e830ea5c4a52cf25e1038aded68d 641 Pfam PF05876 Phage terminase large subunit (GpA) 39 600 6.8E-161 T 29-03-2018 IPR008866 Bacteriophage lambda, GpA AM460_RS26455 17f0938956b608c19655860e8e23b78b 355 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 264 350 2.6E-19 T 29-03-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal AM460_RS13300 88b8a29504422d16088e1851e610d178 87 Pfam PF03927 NapD protein 5 81 6.9E-26 T 29-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AM460_RS13300 88b8a29504422d16088e1851e610d178 87 Gene3D G3DSA:3.55.50.10 8 76 9.3E-4 T 29-03-2018 AM460_RS04375 e9f588040b00f0a765a09edb29d4dc3c 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.5E-39 T 29-03-2018 IPR007335 Protein of unknown function DUF413 AM460_RS05855 f90d9768af1e4cbc5b1d3b6db676293c 188 PIRSF PIRSF004982 1 184 4.3E-56 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM460_RS05855 f90d9768af1e4cbc5b1d3b6db676293c 188 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 2 183 6.0E-91 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM460_RS05855 f90d9768af1e4cbc5b1d3b6db676293c 188 Pfam PF03843 Outer membrane lipoprotein Slp family 16 165 8.2E-44 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM460_RS15040 127f6104cf79ed672d563198af02462a 121 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 119 25.375 T 29-03-2018 IPR008622 Flagellar protein FliT AM460_RS15040 127f6104cf79ed672d563198af02462a 121 Pfam PF05400 Flagellar protein FliT 21 106 2.0E-20 T 29-03-2018 IPR008622 Flagellar protein FliT AM460_RS15040 127f6104cf79ed672d563198af02462a 121 Gene3D G3DSA:1.20.58.380 5 90 1.8E-23 T 29-03-2018 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 4.2E-29 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 164 4.2E-29 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 4.2E-29 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 63 85 4.2E-29 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 4.2E-29 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 106 131 4.2E-29 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 PIRSF PIRSF006648 2 253 6.7E-16 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM460_RS08765 e15ea1beafa40c9e912977a34ea582dd 258 Pfam PF01061 ABC-2 type transporter 13 218 2.1E-19 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM460_RS13360 8d77f686c066c4296f8b5f002af8963f 185 SUPERFAMILY SSF52833 46 178 3.94E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS13360 8d77f686c066c4296f8b5f002af8963f 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM460_RS13360 8d77f686c066c4296f8b5f002af8963f 185 Pfam PF08534 Redoxin 42 166 5.3E-23 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM460_RS13360 8d77f686c066c4296f8b5f002af8963f 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.3E-85 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AM460_RS13360 8d77f686c066c4296f8b5f002af8963f 185 Gene3D G3DSA:3.40.30.10 36 185 2.6E-29 T 29-03-2018 AM460_RS17710 a79a4fda71df3e2994bd90491dc7bf91 403 Pfam PF03594 Benzoate membrane transport protein 19 394 9.5E-156 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM460_RS17710 a79a4fda71df3e2994bd90491dc7bf91 403 TIGRFAM TIGR00843 benE: benzoate transporter 1 395 1.3E-215 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM460_RS10985 ff154f909e0993a4473974aeacbb6e42 421 Pfam PF01266 FAD dependent oxidoreductase 3 390 3.6E-70 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM460_RS10985 ff154f909e0993a4473974aeacbb6e42 421 Gene3D G3DSA:3.50.50.60 2 83 0.033 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10985 ff154f909e0993a4473974aeacbb6e42 421 Hamap MF_00990 L-2-hydroxyglutarate oxidase LhgO [lhgO]. 1 421 85.697 T 29-03-2018 IPR030862 L-2-hydroxyglutarate oxidase LhgO GO:0034419 KEGG: 00630+1.1.3.15|MetaCyc: PWY-181 AM460_RS10985 ff154f909e0993a4473974aeacbb6e42 421 SUPERFAMILY SSF51905 1 286 1.68E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS10985 ff154f909e0993a4473974aeacbb6e42 421 Gene3D G3DSA:3.30.9.10 86 201 4.5E-18 T 29-03-2018 AM460_RS10985 ff154f909e0993a4473974aeacbb6e42 421 Gene3D G3DSA:3.30.9.10 204 352 6.5E-18 T 29-03-2018 AM460_RS09960 9e23702219d06826b81dbc87632ba4fd 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.632 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM460_RS09960 9e23702219d06826b81dbc87632ba4fd 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 287 1.4E-113 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM460_RS09960 9e23702219d06826b81dbc87632ba4fd 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM460_RS09960 9e23702219d06826b81dbc87632ba4fd 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 7.0E-77 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM460_RS07590 630f2d23532b9f2d8630bc536261df5e 541 Gene3D G3DSA:3.40.720.10 223 496 6.3E-21 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS07590 630f2d23532b9f2d8630bc536261df5e 541 SUPERFAMILY SSF53649 226 463 8.22E-22 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS07590 630f2d23532b9f2d8630bc536261df5e 541 Pfam PF00884 Sulfatase 224 462 1.8E-42 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS11710 1655b8f5ab57da0e73ab6f97c093f26a 97 Pfam PF07681 DoxX 16 92 1.1E-15 T 29-03-2018 IPR032808 DoxX family AM460_RS25650 f201cc8f6c6a0e31184c989e924eeb59 417 PIRSF PIRSF033053 1 417 1.3E-166 T 29-03-2018 IPR017014 Fimbrial-like protein YadC AM460_RS25650 f201cc8f6c6a0e31184c989e924eeb59 417 Pfam PF00419 Fimbrial protein 254 416 4.6E-13 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25650 f201cc8f6c6a0e31184c989e924eeb59 417 SUPERFAMILY SSF49401 268 417 5.47E-15 T 29-03-2018 IPR008966 Adhesion domain AM460_RS25650 f201cc8f6c6a0e31184c989e924eeb59 417 Gene3D G3DSA:2.60.40.1090 249 417 6.8E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS14435 51edf7cdc0ac3f61531124bbf12ab022 340 Gene3D G3DSA:3.30.420.10 114 322 4.0E-24 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS14435 51edf7cdc0ac3f61531124bbf12ab022 340 Gene3D G3DSA:1.10.260.40 31 97 9.0E-5 T 29-03-2018 AM460_RS14435 51edf7cdc0ac3f61531124bbf12ab022 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS14435 51edf7cdc0ac3f61531124bbf12ab022 340 SUPERFAMILY SSF46689 12 86 1.43E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS14435 51edf7cdc0ac3f61531124bbf12ab022 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM460_RS14435 51edf7cdc0ac3f61531124bbf12ab022 340 Pfam PF00665 Integrase core domain 118 243 1.8E-26 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM460_RS14435 51edf7cdc0ac3f61531124bbf12ab022 340 Gene3D G3DSA:1.10.10.60 2 30 8.9E-14 T 29-03-2018 AM460_RS09775 3d775fd052b69e0c81a778e21a0b589d 466 Pfam PF00860 Permease family 22 415 4.6E-109 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS09775 3d775fd052b69e0c81a778e21a0b589d 466 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS09775 3d775fd052b69e0c81a778e21a0b589d 466 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 6.7E-137 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM460_RS23260 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.396 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM460_RS23260 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 2.0E-24 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM460_RS23260 4dd5a755e2791c6c7a18454ca9bf5dd6 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 6.6E-45 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM460_RS07270 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:2.40.50.100 46 152 2.2E-13 T 29-03-2018 AM460_RS07270 fa2fe200de2f1ea3c5ec423f407d5286 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 61.876 T 29-03-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA AM460_RS07270 fa2fe200de2f1ea3c5ec423f407d5286 310 Pfam PF13533 Biotin-lipoyl like 47 95 1.5E-20 T 29-03-2018 AM460_RS07270 fa2fe200de2f1ea3c5ec423f407d5286 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 289 3.5E-34 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM460_RS07270 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:2.40.50.100 153 265 8.5E-4 T 29-03-2018 AM460_RS07270 fa2fe200de2f1ea3c5ec423f407d5286 310 Pfam PF13437 HlyD family secretion protein 156 238 2.4E-9 T 29-03-2018 AM460_RS07270 fa2fe200de2f1ea3c5ec423f407d5286 310 SUPERFAMILY SSF111369 46 219 7.19E-24 T 29-03-2018 AM460_RS13445 a6ffb02b119878b6eebad740a760a1c2 341 SUPERFAMILY SSF161098 135 321 2.22E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS13445 a6ffb02b119878b6eebad740a760a1c2 341 Gene3D G3DSA:1.10.3720.10 10 328 5.6E-41 T 29-03-2018 AM460_RS13445 a6ffb02b119878b6eebad740a760a1c2 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 46 5.5E-6 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM460_RS13445 a6ffb02b119878b6eebad740a760a1c2 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 4.8E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS21690 13a19597111b69e5e886df0afd6f7d80 66 Gene3D G3DSA:3.10.350.10 2 61 4.5E-5 T 29-03-2018 AM460_RS21690 13a19597111b69e5e886df0afd6f7d80 66 Pfam PF05489 Phage Tail Protein X 1 54 3.8E-20 T 29-03-2018 IPR008861 Phage Tail Protein X-like AM460_RS23125 10729d38d3d4b20f217f90ce8ee3e38e 241 Pfam PF00005 ABC transporter 17 165 5.0E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS23125 10729d38d3d4b20f217f90ce8ee3e38e 241 Gene3D G3DSA:3.40.50.300 1 241 5.1E-72 T 29-03-2018 AM460_RS23125 10729d38d3d4b20f217f90ce8ee3e38e 241 PIRSF PIRSF039085 1 241 7.2E-106 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM460_RS23125 10729d38d3d4b20f217f90ce8ee3e38e 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS23125 10729d38d3d4b20f217f90ce8ee3e38e 241 SUPERFAMILY SSF52540 1 235 1.39E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS23125 10729d38d3d4b20f217f90ce8ee3e38e 241 SMART SM00382 26 213 1.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS19935 96bc242934e09f787123e5fb915bb045 285 Gene3D G3DSA:1.10.3720.10 9 284 8.7E-43 T 29-03-2018 AM460_RS19935 96bc242934e09f787123e5fb915bb045 285 SUPERFAMILY SSF161098 6 274 4.97E-53 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS19935 96bc242934e09f787123e5fb915bb045 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 1.6E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS17455 1df7b82ae56a436aaeb7e0ec24ccc5bf 439 Gene3D G3DSA:3.20.20.80 69 409 7.1E-47 T 29-03-2018 AM460_RS17455 1df7b82ae56a436aaeb7e0ec24ccc5bf 439 SUPERFAMILY SSF51445 81 365 1.08E-31 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS17455 1df7b82ae56a436aaeb7e0ec24ccc5bf 439 Pfam PF02638 Glycosyl hydrolase-like 10 55 390 2.7E-138 T 29-03-2018 IPR003790 Glycosyl hydrolase-like 10 AM460_RS05625 0adb73303cc9b00fd601a90e2eba1424 523 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 161 475 1.8E-125 T 29-03-2018 IPR017745 Cellulose biosynthesis protein BcsE AM460_RS05625 0adb73303cc9b00fd601a90e2eba1424 523 Pfam PF10995 GGDEF I-site like or GIL domain 165 474 7.0E-122 T 29-03-2018 IPR017745 Cellulose biosynthesis protein BcsE AM460_RS07145 f74374a02267ec0d16b472a08be40fda 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 7.0E-27 T 29-03-2018 IPR010398 Protein of unknown function DUF997 AM460_RS07145 f74374a02267ec0d16b472a08be40fda 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 4.6E-31 T 29-03-2018 IPR010398 Protein of unknown function DUF997 AM460_RS06710 329dd917b7479daf246d50f2cdcec458 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.6E-71 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM460_RS06710 329dd917b7479daf246d50f2cdcec458 156 SUPERFAMILY SSF47973 6 149 6.15E-60 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AM460_RS06710 329dd917b7479daf246d50f2cdcec458 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.173 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM460_RS06710 329dd917b7479daf246d50f2cdcec458 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.2E-64 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AM460_RS06710 329dd917b7479daf246d50f2cdcec458 156 Gene3D G3DSA:1.10.455.10 6 156 3.2E-61 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AM460_RS06710 329dd917b7479daf246d50f2cdcec458 156 PIRSF PIRSF002122 3 156 1.8E-63 T 29-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AM460_RS06710 329dd917b7479daf246d50f2cdcec458 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 29-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM460_RS27055 1bbb9050a3d4b99b0ddbb090c5fe2f1c 171 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 24 165 5.6E-34 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AM460_RS27055 1bbb9050a3d4b99b0ddbb090c5fe2f1c 171 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 3 165 4.9E-42 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AM460_RS02785 f3794191edee224f5d60af2362f1dc6d 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.342 T 29-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM460_RS02785 f3794191edee224f5d60af2362f1dc6d 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site AM460_RS02785 f3794191edee224f5d60af2362f1dc6d 290 Pfam PF01040 UbiA prenyltransferase family 28 271 3.9E-68 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM460_RS02785 f3794191edee224f5d60af2362f1dc6d 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 4.0E-112 T 29-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM460_RS28045 a17f10999ed59a1597d8c825b3875708 94 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 4 91 5.2E-41 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ AM460_RS28045 a17f10999ed59a1597d8c825b3875708 94 TIGRFAM TIGR02741 TraQ: type-F conjugative transfer system pilin chaperone TraQ 2 94 1.1E-52 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ AM460_RS03295 8b0aea89cb9da2f45af4434cd9ed0b13 577 SUPERFAMILY SSF53649 235 554 6.54E-32 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS03295 8b0aea89cb9da2f45af4434cd9ed0b13 577 Pfam PF08019 Domain of unknown function (DUF1705) 56 206 5.6E-5 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM460_RS03295 8b0aea89cb9da2f45af4434cd9ed0b13 577 Pfam PF00884 Sulfatase 238 529 1.4E-46 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS03295 8b0aea89cb9da2f45af4434cd9ed0b13 577 Gene3D G3DSA:3.40.720.10 226 534 4.5E-23 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS26855 89980c0aacb9481b8a15947fe9b441a5 190 Pfam PF07339 Protein of unknown function (DUF1472) 76 176 1.8E-64 T 29-03-2018 IPR009940 Protein of unknown function DUF1472 AM460_RS05065 79ee4cfd255906487645a5993f85b1d1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS05065 79ee4cfd255906487645a5993f85b1d1 78 SUPERFAMILY SSF143800 2 77 6.28E-30 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS05065 79ee4cfd255906487645a5993f85b1d1 78 Gene3D G3DSA:2.30.170.40 2 75 2.0E-28 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS05065 79ee4cfd255906487645a5993f85b1d1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM460_RS05065 79ee4cfd255906487645a5993f85b1d1 78 Pfam PF00830 Ribosomal L28 family 3 62 1.9E-25 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 201 2.2E-59 T 29-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 SUPERFAMILY SSF48019 208 328 3.23E-36 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 Gene3D G3DSA:1.10.8.10 169 206 5.3E-16 T 29-03-2018 AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 SUPERFAMILY SSF52540 1 207 2.57E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 Gene3D G3DSA:3.40.50.300 8 164 8.7E-23 T 29-03-2018 AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 320 2.9E-35 T 29-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 Gene3D G3DSA:1.20.272.10 208 329 2.0E-22 T 29-03-2018 AM460_RS20070 70662a2ff3fb31ed085f8b87283c0728 334 Pfam PF13177 DNA polymerase III, delta subunit 12 164 1.5E-40 T 29-03-2018 AM460_RS11655 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 5.2E-192 T 29-03-2018 AM460_RS11655 dcfc4b075be45d8d8d4d72d556b4bdb7 417 PIRSF PIRSF000412 1 417 6.4E-177 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM460_RS11655 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Gene3D G3DSA:3.90.1150.10 276 416 7.8E-60 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS11655 dcfc4b075be45d8d8d4d72d556b4bdb7 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM460_RS11655 dcfc4b075be45d8d8d4d72d556b4bdb7 417 SUPERFAMILY SSF53383 6 416 2.45E-187 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS11655 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.473 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM460_RS11655 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Gene3D G3DSA:3.40.640.10 37 275 1.1E-54 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS24495 5f90a9f26aecc2b94d1dc59611816b6f 364 Pfam PF07759 Protein of unknown function (DUF1615) 50 363 2.2E-148 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 AM460_RS24495 5f90a9f26aecc2b94d1dc59611816b6f 364 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 20 364 0.0 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 AM460_RS01970 2532900741394840c200eb0ba18df44e 500 Pfam PF13520 Amino acid permease 9 468 1.7E-27 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS01970 2532900741394840c200eb0ba18df44e 500 PIRSF PIRSF006060 1 500 1.5E-64 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS19895 d81e6b0365300b913960bf1a9e609b6c 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 9.0E-110 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM460_RS19895 d81e6b0365300b913960bf1a9e609b6c 213 Gene3D G3DSA:1.10.3890.10 4 207 9.2E-80 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM460_RS19895 d81e6b0365300b913960bf1a9e609b6c 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.48 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM460_RS19895 d81e6b0365300b913960bf1a9e609b6c 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 2.8E-75 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM460_RS19895 d81e6b0365300b913960bf1a9e609b6c 213 SUPERFAMILY SSF101322 2 210 2.48E-82 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM460_RS15520 48c640993214bdae296ba7c2bf30318e 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.3E-115 T 29-03-2018 IPR022522 Flagellar motor stator, MotA AM460_RS15520 48c640993214bdae296ba7c2bf30318e 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site AM460_RS15520 48c640993214bdae296ba7c2bf30318e 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 3.8E-11 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM460_RS06130 00a4fe553b710873614eddac1b1ff3cf 425 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 4.7E-24 T 29-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AM460_RS06130 00a4fe553b710873614eddac1b1ff3cf 425 Gene3D G3DSA:1.10.3470.10 101 402 3.6E-47 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS06130 00a4fe553b710873614eddac1b1ff3cf 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 2.2E-59 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS05590 d30bce9c988f7af08b384a9a8ff9aab4 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 6.9E-27 T 29-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr AM460_RS05610 d30bce9c988f7af08b384a9a8ff9aab4 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 6.9E-27 T 29-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr AM460_RS01100 32de66f4e5d141d4b27f89f8f3da40b7 173 Pfam PF11682 Probable zinc-ribbon 31 155 4.3E-72 T 29-03-2018 IPR021696 Protein of unknown function DUF3279 AM460_RS11305 e4eb76ed47c2a9e77f601fde6e0c37e5 292 SUPERFAMILY SSF111331 7 289 3.66E-92 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM460_RS11305 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Pfam PF01513 ATP-NAD kinase 8 271 7.1E-80 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM460_RS11305 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.058 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM460_RS11305 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Gene3D G3DSA:2.60.200.30 142 264 2.8E-40 T 29-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM460_RS11305 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Gene3D G3DSA:3.40.50.10330 1 141 6.7E-40 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM460_RS25040 f92c8d0df2f2b81775b67f85573da9c6 61 Pfam PF10554 Ash protein family 8 55 3.2E-8 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein AM460_RS17055 238a138012d05b6096abecddb1b9b465 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 5.7E-185 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM460_RS17055 238a138012d05b6096abecddb1b9b465 460 PIRSF PIRSF006060 1 459 1.5E-44 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS17055 238a138012d05b6096abecddb1b9b465 460 Pfam PF13520 Amino acid permease 5 442 7.3E-79 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 181 46.932 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 Pfam PF03925 SeqA protein C-terminal domain 71 179 2.5E-50 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 Pfam PF17206 SeqA protein N-terminal domain 1 36 6.1E-24 T 29-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 SUPERFAMILY SSF47598 1 35 4.45E-14 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 PIRSF PIRSF019401 1 181 1.6E-51 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 Gene3D G3DSA:1.20.1380.10 75 177 2.2E-44 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 Gene3D G3DSA:1.10.1220.10 1 37 1.2E-25 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS22905 98257c33755f9e76f0a0f496edf3456e 181 SUPERFAMILY SSF82808 65 181 1.83E-50 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM460_RS24725 4d24acc407bfc84747b28fe6e8330eeb 165 Pfam PF06496 Protein of unknown function (DUF1097) 9 152 7.1E-27 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 1.2E-154 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 1.5E-161 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS07655 6a6f3ed5f0b4e51514b547786845f439 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 2.8E-105 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM460_RS18495 1a8269a8ed1aee2ae7628726d72b5eee 93 Pfam PF13227 Protein of unknown function (DUF4035) 28 78 7.9E-16 T 29-03-2018 IPR025116 Protein of unknown function DUF4035 AM460_RS12430 8902fe615cdfe858076263ea63c7a812 412 Pfam PF00155 Aminotransferase class I and II 37 376 2.3E-60 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM460_RS12430 8902fe615cdfe858076263ea63c7a812 412 Gene3D G3DSA:3.40.640.10 51 302 2.0E-57 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM460_RS12430 8902fe615cdfe858076263ea63c7a812 412 SUPERFAMILY SSF53383 10 394 3.54E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS12430 8902fe615cdfe858076263ea63c7a812 412 Gene3D G3DSA:3.90.1150.10 303 398 5.0E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 SUPERFAMILY SSF55681 5 318 4.59E-105 T 29-03-2018 AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 4.8E-157 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 PIRSF PIRSF001549 2 423 1.3E-130 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 Gene3D G3DSA:3.40.50.800 328 424 1.8E-17 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 Gene3D G3DSA:3.30.930.10 2 325 1.6E-75 T 29-03-2018 AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.1E-47 T 29-03-2018 AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.788 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 SUPERFAMILY SSF52954 329 423 3.11E-25 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS11830 9499d87c3baa2904c5166034f0018bdc 424 Pfam PF03129 Anticodon binding domain 340 420 4.3E-10 T 29-03-2018 IPR004154 Anticodon-binding AM460_RS04615 78f8852b85546fa07c3641495366a38b 155 ProDom PD092472 YIEI MEMBRANE INNER TRANSMEMBRANE 1 144 4.0E-73 T 29-03-2018 IPR020222 Inner membrane CbrB GO:0016021 AM460_RS02510 28e82b0f029b02ea45307cd3c49ef8db 318 Gene3D G3DSA:1.20.1630.10 5 318 2.7E-57 T 29-03-2018 AM460_RS02510 28e82b0f029b02ea45307cd3c49ef8db 318 Pfam PF03916 Polysulphide reductase, NrfD 5 318 1.5E-111 T 29-03-2018 IPR005614 NrfD family AM460_RS02510 28e82b0f029b02ea45307cd3c49ef8db 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 5 318 8.0E-141 T 29-03-2018 IPR017566 NrfD AM460_RS22270 23b8aa955e966f3380b21e304332387f 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 3.7E-32 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS22270 23b8aa955e966f3380b21e304332387f 219 Gene3D G3DSA:1.10.3720.10 1 218 1.7E-46 T 29-03-2018 AM460_RS22270 23b8aa955e966f3380b21e304332387f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 8.1E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22270 23b8aa955e966f3380b21e304332387f 219 SUPERFAMILY SSF161098 13 202 4.71E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 52.144 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 Gene3D G3DSA:3.90.1150.10 253 424 7.4E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 SUPERFAMILY SSF53383 1 422 2.36E-138 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 Gene3D G3DSA:3.90.1150.10 2 180 1.5E-48 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 Pfam PF00202 Aminotransferase class-III 26 420 1.0E-132 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 1.2E-184 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS22450 764be4c3d7e418e6d19d00f67169dd77 429 PIRSF PIRSF000521 27 423 6.6E-30 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM460_RS23570 1b2ce3fc66d1f5314bd2551fc7556b58 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 7.2E-46 T 29-03-2018 IPR010590 Protein of unknown function DUF1158 AM460_RS23570 1b2ce3fc66d1f5314bd2551fc7556b58 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 82 2.0E-28 T 29-03-2018 IPR010590 Protein of unknown function DUF1158 AM460_RS10955 3ab1e503e3e953ea6b91720eb832faaf 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AM460_RS10955 3ab1e503e3e953ea6b91720eb832faaf 52 Pfam PF01679 Proteolipid membrane potential modulator 3 48 1.6E-18 T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AM460_RS04495 e48c3498685547481d38ac4b6ecf0af5 126 Pfam PF03899 ATP synthase I chain 13 108 9.3E-15 T 29-03-2018 IPR005598 ATP synthase protein I AM460_RS23300 e0f1cc85c9d62b640c6184fbf68bd83e 98 PIRSF PIRSF002736 1 97 1.1E-38 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM460_RS23300 e0f1cc85c9d62b640c6184fbf68bd83e 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 74 2.0E-36 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM460_RS23300 e0f1cc85c9d62b640c6184fbf68bd83e 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 1.2E-28 T 29-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AM460_RS23300 e0f1cc85c9d62b640c6184fbf68bd83e 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.922 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM460_RS23300 e0f1cc85c9d62b640c6184fbf68bd83e 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.8E-29 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM460_RS05925 14cfe6a3d3e68d767bd41c320f32a9b9 499 Pfam PF01384 Phosphate transporter family 30 488 2.4E-85 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM460_RS15200 0de62342afd7ab23129a200d57992d15 78 Gene3D G3DSA:1.20.58.250 14 78 3.5E-16 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM460_RS15200 0de62342afd7ab23129a200d57992d15 78 SUPERFAMILY SSF46575 13 74 2.62E-10 T 29-03-2018 AM460_RS27945 71099441f837cfe9017bbcf16dae6f17 84 Pfam PF10723 Replication regulatory protein RepB 1 82 5.1E-33 T 29-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 AM460_RS18515 77e6d7139d8518fdbe19f2dc659276ac 148 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 143 1.3E-23 T 29-03-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component AM460_RS18515 77e6d7139d8518fdbe19f2dc659276ac 148 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 13 109 3.6E-10 T 29-03-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component AM460_RS13035 6d714dc183b96f255871374e6a71eef9 111 Pfam PF00892 EamA-like transporter family 3 107 7.4E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS13035 6d714dc183b96f255871374e6a71eef9 111 SUPERFAMILY SSF103481 5 107 2.48E-15 T 29-03-2018 AM460_RS13035 6d714dc183b96f255871374e6a71eef9 111 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 111 28.71 T 29-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE AM460_RS08115 cd2d62eae633b83ba2a21e7274852ddb 254 SUPERFAMILY SSF63380 2 137 3.23E-16 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM460_RS08115 cd2d62eae633b83ba2a21e7274852ddb 254 Gene3D G3DSA:2.40.30.10 10 132 3.9E-29 T 29-03-2018 AM460_RS08115 cd2d62eae633b83ba2a21e7274852ddb 254 Gene3D G3DSA:3.40.50.80 133 254 3.1E-23 T 29-03-2018 AM460_RS08115 cd2d62eae633b83ba2a21e7274852ddb 254 Pfam PF04954 Siderophore-interacting protein 142 253 4.3E-21 T 29-03-2018 IPR007037 Siderophore-interacting protein AM460_RS08115 cd2d62eae633b83ba2a21e7274852ddb 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 22 132 1.9E-34 T 29-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AM460_RS26150 10af8e029d2976e91ee59bcb09e86b15 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 33.655 T 29-03-2018 IPR023065 Uncharacterised protein family ApaG AM460_RS26150 10af8e029d2976e91ee59bcb09e86b15 125 SUPERFAMILY SSF110069 5 125 2.09E-48 T 29-03-2018 IPR007474 ApaG domain AM460_RS26150 10af8e029d2976e91ee59bcb09e86b15 125 Gene3D G3DSA:2.60.40.1470 3 125 1.7E-42 T 29-03-2018 IPR007474 ApaG domain AM460_RS26150 10af8e029d2976e91ee59bcb09e86b15 125 Pfam PF04379 ApaG domain 18 102 2.3E-33 T 29-03-2018 IPR007474 ApaG domain AM460_RS22670 b9f03a52e78ffa0c5f3d4d4301c34388 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 1.3E-111 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM460_RS22670 b9f03a52e78ffa0c5f3d4d4301c34388 379 PIRSF PIRSF000267 2 378 7.9E-137 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM460_RS22670 b9f03a52e78ffa0c5f3d4d4301c34388 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 3.9E-210 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM460_RS22015 c278d69c9de2d4a006d286fcc42a49e3 281 SUPERFAMILY SSF161098 8 266 2.34E-50 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS22015 c278d69c9de2d4a006d286fcc42a49e3 281 Gene3D G3DSA:1.10.3720.10 11 273 3.5E-41 T 29-03-2018 AM460_RS22015 c278d69c9de2d4a006d286fcc42a49e3 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 2.4E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS14690 5a371f99207a159f0967ac6749e6ddf7 673 Pfam PF00593 TonB dependent receptor 223 669 3.4E-48 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS14690 5a371f99207a159f0967ac6749e6ddf7 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 1.2E-149 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM460_RS14690 5a371f99207a159f0967ac6749e6ddf7 673 Gene3D G3DSA:2.170.130.10 20 161 4.1E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS14690 5a371f99207a159f0967ac6749e6ddf7 673 SUPERFAMILY SSF56935 19 672 2.43E-94 T 29-03-2018 AM460_RS14690 5a371f99207a159f0967ac6749e6ddf7 673 Gene3D G3DSA:2.40.170.20 163 672 8.8E-59 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM460_RS14690 5a371f99207a159f0967ac6749e6ddf7 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 1.7E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM460_RS18900 9717f2412206ceebab6e32d77afc7ea6 363 Pfam PF00487 Fatty acid desaturase 67 338 4.0E-23 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM460_RS14520 d375d41ea4c9363f03ed4322d708cd38 321 SUPERFAMILY SSF103473 10 252 3.79E-5 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS14520 d375d41ea4c9363f03ed4322d708cd38 321 Gene3D G3DSA:1.20.1250.20 40 320 0.012 T 29-03-2018 AM460_RS14520 d375d41ea4c9363f03ed4322d708cd38 321 Pfam PF04657 Putative inner membrane exporter, YdcZ 169 303 2.8E-15 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM460_RS14520 d375d41ea4c9363f03ed4322d708cd38 321 Pfam PF04657 Putative inner membrane exporter, YdcZ 10 154 7.5E-32 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM460_RS03970 3af34ada375db7d0be57bf6df89a9fd0 286 Pfam PF11392 Protein of unknown function (DUF2877) 168 278 2.6E-28 T 29-03-2018 IPR021530 Protein of unknown function DUF2877 AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.40.366.10 1 184 1.4E-52 T 29-03-2018 AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 PIRSF PIRSF000446 1 309 3.2E-148 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 5.5E-139 T 29-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF55048 128 197 2.62E-18 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 1.5E-39 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.40.366.10 185 309 8.2E-31 T 29-03-2018 AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 Pfam PF00698 Acyl transferase domain 6 283 3.3E-39 T 29-03-2018 IPR014043 Acyl transferase AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF52151 4 122 3.4E-82 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS20105 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF52151 190 308 3.4E-82 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS00565 80a3f3857b9a06eea4736fbaf3926add 91 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 14 91 4.0E-37 T 29-03-2018 IPR009885 Protein of unknown function DUF1435 AM460_RS00565 80a3f3857b9a06eea4736fbaf3926add 91 Pfam PF07256 Protein of unknown function (DUF1435) 14 88 2.9E-34 T 29-03-2018 IPR009885 Protein of unknown function DUF1435 AM460_RS24830 c0d7a104ca9638292e34facbcbc8ad06 231 Pfam PF02589 LUD domain 65 228 1.1E-28 T 29-03-2018 IPR003741 LUD domain AM460_RS24830 c0d7a104ca9638292e34facbcbc8ad06 231 SUPERFAMILY SSF100950 41 229 1.76E-36 T 29-03-2018 AM460_RS24830 c0d7a104ca9638292e34facbcbc8ad06 231 Gene3D G3DSA:3.40.50.10420 40 229 8.2E-39 T 29-03-2018 AM460_RS11070 10825bd895f90507f16b7838030c99c9 278 Pfam PF10554 Ash protein family 117 210 7.4E-12 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein AM460_RS10080 e98da8ae14f078efbb6a95b10fffca23 472 Pfam PF05488 PAAR motif 10 77 4.0E-8 T 29-03-2018 IPR008727 PAAR motif AM460_RS10880 533bb8348100d051c566d9c64ae7ebd9 394 Gene3D G3DSA:1.20.1250.20 8 196 1.3E-26 T 29-03-2018 AM460_RS10880 533bb8348100d051c566d9c64ae7ebd9 394 Gene3D G3DSA:1.20.1250.20 198 392 1.4E-14 T 29-03-2018 AM460_RS10880 533bb8348100d051c566d9c64ae7ebd9 394 SUPERFAMILY SSF103473 9 388 1.16E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS10880 533bb8348100d051c566d9c64ae7ebd9 394 Pfam PF07690 Major Facilitator Superfamily 218 385 2.1E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS10880 533bb8348100d051c566d9c64ae7ebd9 394 Pfam PF07690 Major Facilitator Superfamily 17 194 6.1E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS19625 546514fa12260afbe6c99289d4fdce26 144 Pfam PF06223 Minor tail protein T 11 111 6.3E-50 T 29-03-2018 IPR009350 Minor tail T AM460_RS19625 546514fa12260afbe6c99289d4fdce26 144 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 5 110 5.7E-51 T 29-03-2018 IPR009350 Minor tail T AM460_RS21515 b3e91423b750a14b9b6308fd56d04b7c 99 SUPERFAMILY SSF47413 7 54 5.63E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS21515 b3e91423b750a14b9b6308fd56d04b7c 99 Gene3D G3DSA:1.10.260.40 1 99 6.5E-11 T 29-03-2018 AM460_RS13025 6cfe41165c076082135bf2ff677897a4 88 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 1 82 2.0E-42 T 29-03-2018 IPR020146 Signal transduction protein PmrD AM460_RS13025 6cfe41165c076082135bf2ff677897a4 88 Pfam PF11183 Polymyxin resistance protein PmrD 1 82 1.1E-40 T 29-03-2018 AM460_RS22985 5b0972b6e8389b812c3019761259bc8d 392 SUPERFAMILY SSF50939 306 388 2.64E-57 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM460_RS22985 5b0972b6e8389b812c3019761259bc8d 392 SUPERFAMILY SSF50939 31 272 2.64E-57 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM460_RS22985 5b0972b6e8389b812c3019761259bc8d 392 Gene3D G3DSA:2.120.10.10 25 392 1.1E-60 T 29-03-2018 AM460_RS22985 5b0972b6e8389b812c3019761259bc8d 392 Pfam PF13088 BNR repeat-like domain 46 368 1.5E-66 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM460_RS09180 fdb7c1ab3fb09a1896e4f0b2eba4109e 152 Pfam PF04224 Protein of unknown function, DUF417 18 148 1.0E-17 T 29-03-2018 IPR007339 Protein of unknown function DUF417 AM460_RS27355 2024e57fdc613ed04644f8a3ff12ab0a 289 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 13 287 2.6E-178 T 29-03-2018 IPR017837 Plasmid replication initiator, RepA, IncFII type AM460_RS27355 2024e57fdc613ed04644f8a3ff12ab0a 289 Pfam PF02387 IncFII RepA protein family 16 266 1.5E-34 T 29-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 AM460_RS23430 d9ca12d32e4b935e4bdf3c898e0bd464 391 SUPERFAMILY SSF56322 13 389 1.02E-87 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS23430 d9ca12d32e4b935e4bdf3c898e0bd464 391 Gene3D G3DSA:3.60.120.10 1 391 2.7E-103 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM460_RS23430 d9ca12d32e4b935e4bdf3c898e0bd464 391 Pfam PF00425 chorismate binding enzyme 126 380 1.8E-68 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM460_RS23430 d9ca12d32e4b935e4bdf3c898e0bd464 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 101 387 1.2E-83 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM460_RS23660 06c2013f79225996559fa0a34c1e3f24 118 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 81 115 1.7E-14 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS06450 f46aca10704c249c4d4c5aaffae6abe7 259 Gene3D G3DSA:3.30.420.40 3 153 2.8E-4 T 29-03-2018 AM460_RS06450 f46aca10704c249c4d4c5aaffae6abe7 259 SUPERFAMILY SSF53067 34 164 3.11E-5 T 29-03-2018 AM460_RS27065 cdafe5b0e608bb1f3f37523343765104 195 Pfam PF07296 TraP protein 6 195 2.6E-79 T 29-03-2018 IPR009913 TraP AM460_RS25325 28c843482f0284ac4d271450fa27d9e3 235 Gene3D G3DSA:3.30.2310.10 150 231 4.9E-23 T 29-03-2018 AM460_RS25325 28c843482f0284ac4d271450fa27d9e3 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 2.4E-40 T 29-03-2018 IPR023370 TsaA-like domain AM460_RS25325 28c843482f0284ac4d271450fa27d9e3 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 3.4E-62 T 29-03-2018 IPR023370 TsaA-like domain AM460_RS25325 28c843482f0284ac4d271450fa27d9e3 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 29-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AM460_RS25325 28c843482f0284ac4d271450fa27d9e3 235 Gene3D G3DSA:2.40.30.70 5 149 1.4E-51 T 29-03-2018 IPR023370 TsaA-like domain AM460_RS25325 28c843482f0284ac4d271450fa27d9e3 235 SUPERFAMILY SSF118196 1 229 7.19E-85 T 29-03-2018 IPR023370 TsaA-like domain AM460_RS10490 4fdc3875ae16362d0d6fc94fceb5ae4a 345 Pfam PF04389 Peptidase family M28 100 330 1.1E-34 T 29-03-2018 IPR007484 Peptidase M28 AM460_RS10490 4fdc3875ae16362d0d6fc94fceb5ae4a 345 SUPERFAMILY SSF53187 42 316 2.31E-37 T 29-03-2018 AM460_RS10490 4fdc3875ae16362d0d6fc94fceb5ae4a 345 Gene3D G3DSA:3.40.630.10 25 343 3.9E-39 T 29-03-2018 AM460_RS04875 f3b16c26d8b8718a1f5f2fd3d3d5fb58 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 5.0E-80 T 29-03-2018 IPR009587 Protein of unknown function DUF1198 AM460_RS04875 f3b16c26d8b8718a1f5f2fd3d3d5fb58 150 Gene3D G3DSA:3.40.50.1220 5 131 3.8E-4 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM460_RS04875 f3b16c26d8b8718a1f5f2fd3d3d5fb58 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 142 4.3E-66 T 29-03-2018 IPR009587 Protein of unknown function DUF1198 AM460_RS09525 40e8858e3e49920d9c0eb2dae1ff2d03 235 Pfam PF02361 Cobalt transport protein 10 202 1.1E-4 T 29-03-2018 IPR003339 ABC/ECF transporter, transmembrane component AM460_RS02630 3a8fdfa2388305bacbf777308f51497e 118 Pfam PF04237 YjbR 12 101 1.7E-18 T 29-03-2018 IPR007351 Uncharacterised protein YjbR AM460_RS02630 3a8fdfa2388305bacbf777308f51497e 118 SUPERFAMILY SSF142906 1 116 9.68E-35 T 29-03-2018 AM460_RS22845 cecec983a6cf6205f6e662ae22f377b7 169 Pfam PF08349 Protein of unknown function (DUF1722) 41 158 1.5E-34 T 29-03-2018 IPR013560 Domain of unknown function DUF1722 AM460_RS01265 f25e113548ae88a3bb1705ef81411063 337 SUPERFAMILY SSF74650 40 334 4.39E-6 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM460_RS01265 f25e113548ae88a3bb1705ef81411063 337 Gene3D G3DSA:2.70.98.10 25 337 3.2E-18 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM460_RS12380 6a7e171b4b01b79b448227cbfb7f8196 418 PRINTS PR00762 Chloride channel signature 153 172 5.2E-7 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS12380 6a7e171b4b01b79b448227cbfb7f8196 418 PRINTS PR00762 Chloride channel signature 103 122 5.2E-7 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS12380 6a7e171b4b01b79b448227cbfb7f8196 418 PRINTS PR00762 Chloride channel signature 320 340 5.2E-7 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS12380 6a7e171b4b01b79b448227cbfb7f8196 418 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 9 410 37.938 T 29-03-2018 IPR022969 Chloride channel YfeO AM460_RS12380 6a7e171b4b01b79b448227cbfb7f8196 418 SUPERFAMILY SSF81340 9 398 2.49E-44 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM460_RS12380 6a7e171b4b01b79b448227cbfb7f8196 418 Pfam PF00654 Voltage gated chloride channel 93 391 1.9E-18 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS12380 6a7e171b4b01b79b448227cbfb7f8196 418 Gene3D G3DSA:1.10.3080.10 4 399 8.1E-32 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM460_RS23805 63617b1c98f472d36b446e951f1d0c57 160 PIRSF PIRSF017306 1 160 7.6E-109 T 29-03-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM460_RS23805 63617b1c98f472d36b446e951f1d0c57 160 SUPERFAMILY SSF51182 2 156 1.02E-53 T 29-03-2018 IPR011051 RmlC-like cupin domain AM460_RS23805 63617b1c98f472d36b446e951f1d0c57 160 Pfam PF04115 Ureidoglycolate lyase 2 154 3.8E-45 T 29-03-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM460_RS23805 63617b1c98f472d36b446e951f1d0c57 160 Hamap MF_00616 Ureidoglycolate lyase [allA]. 1 160 37.512 T 29-03-2018 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM460_RS23805 63617b1c98f472d36b446e951f1d0c57 160 Gene3D G3DSA:2.60.120.480 1 159 1.4E-45 T 29-03-2018 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM460_RS25560 a997dcf071673157a7a6094d5bc32b81 336 Pfam PF00419 Fimbrial protein 194 335 1.7E-14 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS25560 a997dcf071673157a7a6094d5bc32b81 336 SUPERFAMILY SSF49401 198 335 1.09E-20 T 29-03-2018 IPR008966 Adhesion domain AM460_RS25560 a997dcf071673157a7a6094d5bc32b81 336 Gene3D G3DSA:2.60.40.1090 190 336 6.1E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS21725 f41cf39c8e7bc6576abb7da32670d0a6 193 SUPERFAMILY SSF69255 26 80 5.49E-5 T 29-03-2018 AM460_RS21725 f41cf39c8e7bc6576abb7da32670d0a6 193 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 5 191 4.9E-53 T 29-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM460_RS21725 f41cf39c8e7bc6576abb7da32670d0a6 193 Gene3D G3DSA:2.40.50.260 12 96 5.2E-6 T 29-03-2018 AM460_RS21725 f41cf39c8e7bc6576abb7da32670d0a6 193 Pfam PF04717 Type VI secretion system, phage-baseplate injector 3 114 1.1E-35 T 29-03-2018 IPR006531 Gp5 N-terminal AM460_RS07715 c0990e6f34e6bacb138fd96ccb372012 196 SUPERFAMILY SSF53697 2 191 1.27E-51 T 29-03-2018 AM460_RS07715 c0990e6f34e6bacb138fd96ccb372012 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 62.808 T 29-03-2018 IPR023070 DnaA initiator-associating protein AM460_RS07715 c0990e6f34e6bacb138fd96ccb372012 196 Gene3D G3DSA:3.40.50.10490 1 196 2.2E-37 T 29-03-2018 AM460_RS07715 c0990e6f34e6bacb138fd96ccb372012 196 Pfam PF13580 SIS domain 9 144 3.2E-33 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS21495 29a57867a54b552cbfcb160b677d664c 74 Pfam PF10809 Protein of unknown function (DUF2732) 13 65 1.2E-17 T 29-03-2018 IPR020126 Protein of unknown function DUF2732 AM460_RS03910 3bb874f8411bf5fe628b6cee545af7ec 201 SUPERFAMILY SSF55718 12 111 4.41E-7 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS03910 3bb874f8411bf5fe628b6cee545af7ec 201 Gene3D G3DSA:3.30.1050.10 17 125 1.1E-4 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS03910 3bb874f8411bf5fe628b6cee545af7ec 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 2.2E-20 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM460_RS11965 0de0dddf0320d73d069bfdeb52874135 353 Pfam PF01594 AI-2E family transporter 20 345 4.8E-86 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AM460_RS04060 8765b9cf84d2ff0cb78895ad4f458334 206 PIRSF PIRSF006324 1 206 7.4E-41 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS04060 8765b9cf84d2ff0cb78895ad4f458334 206 Pfam PF01810 LysE type translocator 14 205 6.8E-58 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS04060 8765b9cf84d2ff0cb78895ad4f458334 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 1.2E-69 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AM460_RS09440 88088e38ebc087bb6ab72122d1f7bbf1 71 ProDom PD056256 YQGC CYTOPLASMIC 1 51 5.0E-16 T 29-03-2018 IPR020102 Uncharacterised protein family YqgC AM460_RS09440 88088e38ebc087bb6ab72122d1f7bbf1 71 Pfam PF17430 Uncharacterized yqgC 1 51 1.9E-39 T 29-03-2018 IPR020102 Uncharacterised protein family YqgC AM460_RS14370 63c21c01a4ac71f6812fb1aa8eb9c4ab 301 Pfam PF13990 YjcZ-like protein 26 296 5.6E-72 T 29-03-2018 IPR025599 YjcZ-like protein AM460_RS13830 b6bccb5e6d03f40f05c857d01d105b87 180 SUPERFAMILY SSF49401 29 176 2.98E-11 T 29-03-2018 IPR008966 Adhesion domain AM460_RS13830 b6bccb5e6d03f40f05c857d01d105b87 180 Pfam PF00419 Fimbrial protein 32 174 3.5E-8 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS13830 b6bccb5e6d03f40f05c857d01d105b87 180 Gene3D G3DSA:2.60.40.1090 28 178 1.5E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS17110 3a4f4bac40f8ebeea68b56c6ff1540ea 111 Hamap MF_00546 Acid shock protein [asr]. 10 111 16.699 T 29-03-2018 IPR023497 Acid shock protein AM460_RS00710 ce701b3b5dfc225c7f1afc12c5cf014a 318 Pfam PF04754 Putative transposase, YhgA-like 8 210 5.3E-89 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like AM460_RS00710 ce701b3b5dfc225c7f1afc12c5cf014a 318 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 301 5.1E-50 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM460_RS21630 ddbdad2c510d018b4c6b6b3f4ea8dfa6 894 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 133 456 1.1E-124 T 29-03-2018 IPR008766 Replication gene A protein GO:0006260 AM460_RS21630 ddbdad2c510d018b4c6b6b3f4ea8dfa6 894 ProDom PD092055 ENDONUCLEASE POSSIBLE PROPHAGE FOR ORFE TRANSPOSABLE FELS-2 RETRON STY4635 ELEMENT 629 750 3.0E-5 T 29-03-2018 IPR020220 Retron, EC67, C-terminal GO:0016788 AM460_RS15415 9e6d6d1e3a7787ba4d21c6da90187136 129 Pfam PF06995 Phage P2 GpU 5 125 1.9E-33 T 29-03-2018 IPR009734 Myoviridae, GpU AM460_RS25320 0ea44a49b70285717a7432533a30b5a1 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 36.266 T 29-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM460_RS25320 0ea44a49b70285717a7432533a30b5a1 134 Pfam PF16358 RcsF lipoprotein 29 132 1.3E-50 T 29-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM460_RS18000 6345f92a12a069bafdda31f272282875 212 Gene3D G3DSA:3.40.50.720 1 204 7.6E-21 T 29-03-2018 AM460_RS18000 6345f92a12a069bafdda31f272282875 212 SUPERFAMILY SSF51735 1 200 5.15E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18000 6345f92a12a069bafdda31f272282875 212 Pfam PF13460 NAD(P)H-binding 8 189 8.4E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS02305 b870b93f46b9c501a6137f2ac75be44e 147 Gene3D G3DSA:3.10.180.10 7 147 1.6E-19 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS02305 b870b93f46b9c501a6137f2ac75be44e 147 SUPERFAMILY SSF54593 2 139 3.68E-28 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM460_RS02305 b870b93f46b9c501a6137f2ac75be44e 147 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 138 1.8E-6 T 29-03-2018 IPR028973 PhnB-like AM460_RS23880 c6d10f788cab36060a30a6609d07fc8f 152 Gene3D G3DSA:2.40.50.140 81 152 1.4E-13 T 29-03-2018 AM460_RS23880 c6d10f788cab36060a30a6609d07fc8f 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 1.2E-23 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain AM460_RS23880 c6d10f788cab36060a30a6609d07fc8f 152 SUPERFAMILY SSF141322 95 149 7.32E-5 T 29-03-2018 AM460_RS02555 2f3b955532e9e8efda65ae88b92ac7f3 229 Pfam PF04172 LrgB-like family 14 226 6.4E-68 T 29-03-2018 IPR007300 CidB/LrgB family AM460_RS04645 8179238bd3cd6e1b379e0f89a225773f 391 Pfam PF07690 Major Facilitator Superfamily 10 342 1.5E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS04645 8179238bd3cd6e1b379e0f89a225773f 391 SUPERFAMILY SSF103473 3 385 7.72E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS04645 8179238bd3cd6e1b379e0f89a225773f 391 Gene3D G3DSA:1.20.1250.20 193 391 6.2E-13 T 29-03-2018 AM460_RS04645 8179238bd3cd6e1b379e0f89a225773f 391 Gene3D G3DSA:1.20.1250.20 1 192 4.2E-33 T 29-03-2018 AM460_RS04645 8179238bd3cd6e1b379e0f89a225773f 391 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 391 37.635 T 29-03-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 Pfam PF00654 Voltage gated chloride channel 75 414 5.0E-74 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 16 425 40.589 T 29-03-2018 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 PRINTS PR00762 Chloride channel signature 115 134 2.8E-20 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 PRINTS PR00762 Chloride channel signature 165 184 2.8E-20 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 PRINTS PR00762 Chloride channel signature 382 401 2.8E-20 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 PRINTS PR00762 Chloride channel signature 364 380 2.8E-20 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 PRINTS PR00762 Chloride channel signature 329 349 2.8E-20 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 Gene3D G3DSA:1.10.3080.10 7 429 2.7E-74 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM460_RS17135 38a93f9d8ac66f51df1323f150022689 430 SUPERFAMILY SSF81340 4 426 3.79E-86 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM460_RS02130 4ab13bfa7f38d4245489085048fe75b8 57 Pfam PF10753 Toxin GhoT_OrtT 4 57 1.8E-25 T 29-03-2018 IPR019689 Toxin GhoT/OrtT AM460_RS19730 215c50a3212d17ea642d6dfa58a9b805 158 Hamap MF_04109 Endolysin. 1 154 39.457 T 29-03-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 AM460_RS19730 215c50a3212d17ea642d6dfa58a9b805 158 Gene3D G3DSA:1.10.530.10 1 158 1.6E-56 T 29-03-2018 AM460_RS19730 215c50a3212d17ea642d6dfa58a9b805 158 Pfam PF00959 Phage lysozyme 33 140 3.3E-23 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM460_RS19730 215c50a3212d17ea642d6dfa58a9b805 158 SUPERFAMILY SSF53955 3 152 4.39E-54 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS01545 ed28edc62f32294a86dd0d9d2423f93c 331 Gene3D G3DSA:1.10.3470.10 31 310 1.4E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS01545 ed28edc62f32294a86dd0d9d2423f93c 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 2.1E-43 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS27505 48b65676a9349dc6469bf6768f08adf9 103 Pfam PF07178 TraL protein 11 102 8.0E-32 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM460_RS27505 48b65676a9349dc6469bf6768f08adf9 103 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 9 102 4.2E-22 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM460_RS27505 48b65676a9349dc6469bf6768f08adf9 103 PIRSF PIRSF003259 1 103 3.8E-52 T 29-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 AM460_RS25020 ee71c20a584ee96a6b4a8734c909210a 267 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 102 254 1.3E-36 T 29-03-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system AM460_RS25020 ee71c20a584ee96a6b4a8734c909210a 267 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 11 98 1.5E-30 T 29-03-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain AM460_RS02260 a7a2fd4a1842200bf68a509b06def410 547 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 3.3E-43 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM460_RS02260 a7a2fd4a1842200bf68a509b06def410 547 Gene3D G3DSA:3.40.720.10 206 544 8.0E-22 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM460_RS02260 a7a2fd4a1842200bf68a509b06def410 547 Pfam PF00884 Sulfatase 238 527 3.5E-54 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM460_RS02260 a7a2fd4a1842200bf68a509b06def410 547 SUPERFAMILY SSF53649 239 531 1.64E-20 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM460_RS07660 6547a4edb113747cab8e6e6e19a4fd73 335 SUPERFAMILY SSF51679 7 328 1.07E-86 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM460_RS07660 6547a4edb113747cab8e6e6e19a4fd73 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 327 7.1E-134 T 29-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 AM460_RS07660 6547a4edb113747cab8e6e6e19a4fd73 335 Gene3D G3DSA:3.20.20.30 6 329 3.9E-71 T 29-03-2018 AM460_RS07660 6547a4edb113747cab8e6e6e19a4fd73 335 Pfam PF00296 Luciferase-like monooxygenase 20 300 1.3E-34 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM460_RS20305 59f5f7b6e786e367c7f6ab9b20260df6 124 Pfam PF13984 MsyB protein 3 124 6.2E-64 T 29-03-2018 IPR025729 MsyB protein AM460_RS24465 1ed5f291446673d46887c6beff93346e 86 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 1 86 26.833 T 29-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 AM460_RS24465 1ed5f291446673d46887c6beff93346e 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 5.0E-32 T 29-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 AM460_RS00470 ad6fbdfc8465cf486a65b0d66b0bc078 227 Pfam PF10979 Protein of unknown function (DUF2786) 8 44 2.0E-11 T 29-03-2018 IPR024498 Domain of unknown function DUF2786 AM460_RS00470 ad6fbdfc8465cf486a65b0d66b0bc078 227 PIRSF PIRSF028111 1 227 1.4E-90 T 29-03-2018 IPR016868 Bacteriophage B3, Orf5 AM460_RS11325 dcdab56e82a7c21f0700987d54cb3ed8 263 Pfam PF01578 Cytochrome C assembly protein 37 261 1.1E-44 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM460_RS14595 cab753bac7f7926a76e6608a8a1e815c 181 SUPERFAMILY SSF52540 2 181 3.16E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS14595 cab753bac7f7926a76e6608a8a1e815c 181 Gene3D G3DSA:3.40.50.300 2 181 3.0E-64 T 29-03-2018 AM460_RS14595 cab753bac7f7926a76e6608a8a1e815c 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 4.9E-64 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS14595 cab753bac7f7926a76e6608a8a1e815c 181 PIRSF PIRSF006135 1 181 1.0E-64 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM460_RS08955 e6f8b1ad88046f2ab78fd81e1225c559 512 Gene3D G3DSA:1.20.5.50 6 50 2.2E-4 T 29-03-2018 AM460_RS08955 e6f8b1ad88046f2ab78fd81e1225c559 512 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 161 2.7E-12 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM460_RS08955 e6f8b1ad88046f2ab78fd81e1225c559 512 Pfam PF03050 Transposase IS66 family 176 461 1.4E-101 T 29-03-2018 IPR004291 Transposase, IS66 AM460_RS08955 e6f8b1ad88046f2ab78fd81e1225c559 512 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 9.1E-14 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AM460_RS08955 e6f8b1ad88046f2ab78fd81e1225c559 512 Gene3D G3DSA:1.10.287.510 52 159 0.31 T 29-03-2018 AM460_RS08955 e6f8b1ad88046f2ab78fd81e1225c559 512 Pfam PF13817 IS66 C-terminal element 468 505 3.0E-16 T 29-03-2018 AM460_RS02660 772a7890f6cef176beaf1b7c205a4578 499 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 493 2.5E-72 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS02660 772a7890f6cef176beaf1b7c205a4578 499 PIRSF PIRSF002457 5 499 2.3E-133 T 29-03-2018 IPR030676 Citrate carrier CitT-related AM460_RS02660 772a7890f6cef176beaf1b7c205a4578 499 Pfam PF00939 Sodium:sulfate symporter transmembrane region 20 498 3.6E-116 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM460_RS21050 439884b262a888f33093b5ce352e478f 306 Pfam PF11300 Protein of unknown function (DUF3102) 65 173 5.2E-5 T 29-03-2018 IPR021451 Protein of unknown function DUF3102 AM460_RS04635 771aad9222bb4ada72854819b4f785b9 249 Gene3D G3DSA:3.90.470.20 11 140 1.7E-14 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM460_RS18720 c2e45c61f6be9bdbfbc338fb9fc21c7d 51 Pfam PF07151 Protein of unknown function (DUF1391) 2 48 3.3E-33 T 29-03-2018 IPR009821 Protein of unknown function DUF1391 AM460_RS18720 c2e45c61f6be9bdbfbc338fb9fc21c7d 51 ProDom PD019047 YDFA YDAF PROPHAGE ECS2210 ECS2767 ECS1505 STY2067 1 49 2.0E-21 T 29-03-2018 IPR009821 Protein of unknown function DUF1391 AM460_RS18520 012861f7be2aa2cf4205913bdc204cc6 116 Pfam PF05521 Phage head-tail joining protein 11 110 1.0E-15 T 29-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor AM460_RS18520 012861f7be2aa2cf4205913bdc204cc6 116 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 17 111 2.0E-6 T 29-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor AM460_RS12450 751f2621d29a8ffbaf5bb28650a7080b 80 ProDom PD857460 MEMBRANE YFDY INNER TRANSMEMBRANE STY2638 ECS3257 1 80 8.0E-39 T 29-03-2018 IPR024470 Protein of unknown function DUF2545 AM460_RS12450 751f2621d29a8ffbaf5bb28650a7080b 80 Pfam PF10810 Protein of unknown function (DUF2545) 1 80 2.3E-45 T 29-03-2018 IPR024470 Protein of unknown function DUF2545 AM460_RS06525 8eb89df85d843ad5d87215a05445a933 387 SUPERFAMILY SSF51419 34 268 1.83E-24 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS06525 8eb89df85d843ad5d87215a05445a933 387 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 6.9E-22 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM460_RS06525 8eb89df85d843ad5d87215a05445a933 387 Gene3D G3DSA:3.20.20.10 25 270 8.7E-27 T 29-03-2018 IPR029066 PLP-binding barrel AM460_RS06545 9db45a3f8c77995775ddeff0cf944fbf 434 Pfam PF10797 Protein of unknown function 6 431 7.8E-172 T 29-03-2018 IPR019733 Uncharacterised protein family YhfT AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 29-03-2018 IPR022272 Lipocalin family conserved site AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 SUPERFAMILY SSF50814 15 176 5.92E-49 T 29-03-2018 IPR012674 Calycin AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PIRSF PIRSF036893 1 177 1.5E-53 T 29-03-2018 IPR022271 Lipocalin, ApoD type AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 6.1E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 6.1E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 6.1E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 6.1E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 6.1E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 6.1E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 6.1E-51 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 Gene3D G3DSA:2.40.128.20 2 177 7.8E-45 T 29-03-2018 IPR012674 Calycin AM460_RS26575 242daac0a123d6e504da8db7831e006e 177 Pfam PF08212 Lipocalin-like domain 35 174 7.0E-47 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AM460_RS02860 ea8c0d748b8851e307dded14ffe3c860 80 Pfam PF11106 Exopolysaccharide production protein YjbE 1 79 2.0E-28 T 29-03-2018 IPR025858 Exopolysaccharide production protein YjbE AM460_RS05685 a9d4d9a622143818c6348a968168fbd0 309 Pfam PF00294 pfkB family carbohydrate kinase 3 305 6.8E-75 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS05685 a9d4d9a622143818c6348a968168fbd0 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS05685 a9d4d9a622143818c6348a968168fbd0 309 Gene3D G3DSA:3.40.1190.20 1 308 7.6E-59 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS05685 a9d4d9a622143818c6348a968168fbd0 309 SUPERFAMILY SSF53613 2 302 2.03E-74 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS14245 d66c9e648a79ec6e52fa4ce5a0565f37 475 Gene3D G3DSA:3.30.420.10 1 201 1.9E-28 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS14245 d66c9e648a79ec6e52fa4ce5a0565f37 475 Pfam PF00929 Exonuclease 13 188 9.8E-32 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS14245 d66c9e648a79ec6e52fa4ce5a0565f37 475 Pfam PF08411 Exonuclease C-terminal 212 472 5.1E-103 T 29-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AM460_RS14245 d66c9e648a79ec6e52fa4ce5a0565f37 475 SUPERFAMILY SSF53098 9 474 2.28E-135 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS14245 d66c9e648a79ec6e52fa4ce5a0565f37 475 PIRSF PIRSF000977 3 475 9.2E-202 T 29-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AM460_RS14245 d66c9e648a79ec6e52fa4ce5a0565f37 475 SMART SM00479 10 203 0.0015 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS08065 a66343ae1ae0ed0862055ecd995a3a4f 149 Pfam PF04074 Domain of unknown function (DUF386) 3 139 2.9E-24 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS08065 a66343ae1ae0ed0862055ecd995a3a4f 149 SUPERFAMILY SSF51197 3 142 2.28E-22 T 29-03-2018 AM460_RS08065 a66343ae1ae0ed0862055ecd995a3a4f 149 Gene3D G3DSA:2.60.120.370 2 142 1.8E-23 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family AM460_RS04885 880032f2f635a1cfbb721a90bb0235ce 119 PIRSF PIRSF018634 1 117 7.0E-48 T 29-03-2018 IPR009387 Toxin HigB-2 AM460_RS04885 880032f2f635a1cfbb721a90bb0235ce 119 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 113 3.9E-41 T 29-03-2018 IPR009387 Toxin HigB-2 AM460_RS25725 e1f11b794d647462366a094eeaf6a8b8 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 4.0E-63 T 29-03-2018 AM460_RS25725 e1f11b794d647462366a094eeaf6a8b8 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 23 106 2.6E-9 T 29-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like AM460_RS21735 4072e883e1c9a7aa5a432651fc550506 298 PIRSF PIRSF020481 1 298 2.2E-99 T 29-03-2018 IPR014507 Baseplate assembly protein J, predicted AM460_RS21735 4072e883e1c9a7aa5a432651fc550506 298 Pfam PF04865 Baseplate J-like protein 112 258 5.8E-20 T 29-03-2018 IPR006949 Baseplate protein J-like AM460_RS00120 f1d1dd58e24356ed2d0086d2d9020675 450 PIRSF PIRSF004548 1 447 1.9E-182 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM460_RS00120 f1d1dd58e24356ed2d0086d2d9020675 450 Pfam PF06123 Inner membrane protein CreD 6 427 5.4E-144 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM460_RS16350 71f70a139ec2cfd141ba8f5c3f0bd749 252 Gene3D G3DSA:3.20.20.370 1 252 7.8E-77 T 29-03-2018 AM460_RS16350 71f70a139ec2cfd141ba8f5c3f0bd749 252 Pfam PF04794 YdjC-like protein 5 240 2.0E-58 T 29-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like AM460_RS16350 71f70a139ec2cfd141ba8f5c3f0bd749 252 SUPERFAMILY SSF88713 1 252 1.25E-72 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM460_RS16350 71f70a139ec2cfd141ba8f5c3f0bd749 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 40.667 T 29-03-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AM460_RS00485 440f845436b08e3ffff0708b1680276f 150 Pfam PF06252 Protein of unknown function (DUF1018) 20 136 1.4E-39 T 29-03-2018 IPR009363 Bacteriophage Mu, Gp16 AM460_RS05450 fecb4c06da452aaa204fe0ab6a9dce92 331 Pfam PF01757 Acyltransferase family 6 318 8.6E-35 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM460_RS05450 fecb4c06da452aaa204fe0ab6a9dce92 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 37.959 T 29-03-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 AM460_RS17400 0fb1ba8afb40bd3731b0578c16a13ecc 167 SUPERFAMILY SSF49401 27 165 1.04E-23 T 29-03-2018 IPR008966 Adhesion domain AM460_RS17400 0fb1ba8afb40bd3731b0578c16a13ecc 167 Gene3D G3DSA:2.60.40.1090 36 167 8.9E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS27820 9340d08362b4ab2dba6522765f8d3e7d 134 Gene3D G3DSA:1.10.10.10 1 72 3.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS27820 9340d08362b4ab2dba6522765f8d3e7d 134 SUPERFAMILY SSF48295 7 59 1.31E-11 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM460_RS27820 9340d08362b4ab2dba6522765f8d3e7d 134 Pfam PF01527 Transposase 12 70 8.0E-13 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS00235 24cd30c90837b8d57d48f278973a2fce 204 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 79 199 1.8E-24 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS11030 82bc90196f4e0a557283a01ee8771022 178 SUPERFAMILY SSF109604 1 173 8.63E-40 T 29-03-2018 AM460_RS11030 82bc90196f4e0a557283a01ee8771022 178 Gene3D G3DSA:1.10.3210.10 1 178 2.1E-23 T 29-03-2018 AM460_RS22965 d503fe97bc63d6815349e6ed71bb4fd6 385 SUPERFAMILY SSF56796 5 377 8.77E-101 T 29-03-2018 AM460_RS22965 d503fe97bc63d6815349e6ed71bb4fd6 385 Gene3D G3DSA:3.40.50.1970 6 177 2.7E-36 T 29-03-2018 AM460_RS22965 d503fe97bc63d6815349e6ed71bb4fd6 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 6 370 2.3E-102 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM460_RS22965 d503fe97bc63d6815349e6ed71bb4fd6 385 Gene3D G3DSA:1.20.1090.10 178 384 1.6E-54 T 29-03-2018 AM460_RS26180 61913914683c9ecef01d172aaaa9153e 176 Gene3D G3DSA:3.40.50.360 1 176 8.4E-44 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS26180 61913914683c9ecef01d172aaaa9153e 176 SUPERFAMILY SSF52218 2 170 9.54E-47 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS26180 61913914683c9ecef01d172aaaa9153e 176 Pfam PF02525 Flavodoxin-like fold 2 167 4.5E-41 T 29-03-2018 IPR003680 Flavodoxin-like fold AM460_RS26180 61913914683c9ecef01d172aaaa9153e 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 54.28 T 29-03-2018 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM460_RS20840 12eefbf50026770070661910e53e33d2 263 SUPERFAMILY SSF161098 56 237 3.01E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS20840 12eefbf50026770070661910e53e33d2 263 Gene3D G3DSA:1.10.3720.10 7 254 5.1E-30 T 29-03-2018 AM460_RS20840 12eefbf50026770070661910e53e33d2 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 2.5E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS02430 d8725305957ea9473580144227432ab3 91 Pfam PF17090 Uncharacterised protein family 30 91 5.1E-16 T 29-03-2018 IPR031381 Uncharacterised protein YtcA AM460_RS05455 ae78c0ac118f3e4745472066d8ce6668 99 Pfam PF13983 YsaB-like lipoprotein 25 99 4.9E-42 T 29-03-2018 IPR025728 YsaB-like lipoprotein AM460_RS11220 5449cab370b012349ff2abc85a369908 109 Pfam PF05939 Phage minor tail protein 2 108 5.2E-37 T 29-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail AM460_RS27935 9923d9ff8fafc1e016f255d843c20d34 24 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 24 1.0E-17 T 29-03-2018 IPR012605 RepA1 leader peptide Tap AM460_RS27935 9923d9ff8fafc1e016f255d843c20d34 24 Pfam PF08048 Tap RepA1 leader peptide 1 24 9.4E-15 T 29-03-2018 IPR012605 RepA1 leader peptide Tap AM460_RS16815 22b3eda7338010d5fdc4e0b00e2b3963 365 Gene3D G3DSA:3.20.20.70 5 365 2.5E-124 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS16815 22b3eda7338010d5fdc4e0b00e2b3963 365 SUPERFAMILY SSF51395 4 364 6.72E-122 T 29-03-2018 AM460_RS16815 22b3eda7338010d5fdc4e0b00e2b3963 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 7.8E-90 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM460_RS05280 76ef4b0973c993f7f7c8a2ef5491fffa 120 PIRSF PIRSF028770 1 120 2.6E-67 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AM460_RS05280 76ef4b0973c993f7f7c8a2ef5491fffa 120 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.6E-40 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AM460_RS24910 0b5acab09ead5f1e2cb8485bf26a3862 380 SUPERFAMILY SSF51395 5 346 9.02E-95 T 29-03-2018 AM460_RS24910 0b5acab09ead5f1e2cb8485bf26a3862 380 Gene3D G3DSA:3.20.20.70 3 373 1.4E-95 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM460_RS24910 0b5acab09ead5f1e2cb8485bf26a3862 380 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 343 1.1E-76 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM460_RS20045 b304728c9f6dc5fa778e55c107c0ad93 125 Pfam PF07233 Protein of unknown function (DUF1425) 34 124 1.9E-26 T 29-03-2018 IPR010824 Protein of unknown function DUF1425 AM460_RS04715 6d272ba586a06e7a48590038c1f4f453 135 SUPERFAMILY SSF140804 6 133 7.32E-34 T 29-03-2018 IPR027405 YidB-like AM460_RS04715 6d272ba586a06e7a48590038c1f4f453 135 Pfam PF06078 Bacterial protein of unknown function (DUF937) 21 110 5.0E-11 T 29-03-2018 IPR009282 Protein of unknown function DUF937 AM460_RS04715 6d272ba586a06e7a48590038c1f4f453 135 Gene3D G3DSA:1.10.10.690 3 134 1.3E-38 T 29-03-2018 AM460_RS02140 c829b9724af43c60b70e0f10795110ed 90 SUPERFAMILY SSF55729 2 88 4.58E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS02140 c829b9724af43c60b70e0f10795110ed 90 Gene3D G3DSA:3.40.630.30 1 90 1.2E-15 T 29-03-2018 AM460_RS02140 c829b9724af43c60b70e0f10795110ed 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 1.8E-22 T 29-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AM460_RS08265 9021c74f2638bb1e724fb247342052ba 349 Gene3D G3DSA:2.60.40.1090 212 349 2.5E-9 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM460_RS14680 c080d35d24212351f27c2e5850b408d0 56 Gene3D G3DSA:2.60.120.260 1 48 2.7E-4 T 29-03-2018 IPR008979 Galactose-binding domain-like AM460_RS06455 d81913faaa238ca200773af50bf2bd03 179 Pfam PF05137 Fimbrial assembly protein (PilN) 99 169 2.2E-8 T 29-03-2018 IPR007813 Fimbrial assembly PilN AM460_RS19255 a7e337d07005aca63720bca8e79c203c 210 SUPERFAMILY SSF101473 2 204 5.1E-57 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM460_RS19255 a7e337d07005aca63720bca8e79c203c 210 SMART SM01120 32 206 2.3E-79 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM460_RS19255 a7e337d07005aca63720bca8e79c203c 210 Pfam PF02734 DAK2 domain 32 204 8.3E-55 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM460_RS19255 a7e337d07005aca63720bca8e79c203c 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.3E-81 T 29-03-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 AM460_RS14325 60ae4ac0efdf6159568cf274c335f7f8 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 3.6E-53 T 29-03-2018 IPR026325 Protein of unknown function DUF932 AM460_RS24640 45036a9b5bd9e830c17e694ef6e30e19 419 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 7.0E-83 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM460_RS12210 00a37121ffe14c72590d31ff3ecdcabc 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 2.9E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS12210 00a37121ffe14c72590d31ff3ecdcabc 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 8.5E-116 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM460_RS12210 00a37121ffe14c72590d31ff3ecdcabc 277 Gene3D G3DSA:1.10.3720.10 12 275 9.3E-48 T 29-03-2018 AM460_RS12210 00a37121ffe14c72590d31ff3ecdcabc 277 SUPERFAMILY SSF161098 16 264 3.64E-58 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS12210 00a37121ffe14c72590d31ff3ecdcabc 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 4.7E-114 T 29-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AM460_RS10575 8bce9f28149d4c4a54ad08136896005f 212 SUPERFAMILY SSF53639 7 211 1.82E-58 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS10575 8bce9f28149d4c4a54ad08136896005f 212 Gene3D G3DSA:3.40.225.10 7 193 6.1E-50 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS10575 8bce9f28149d4c4a54ad08136896005f 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 190 9.2E-44 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS10575 8bce9f28149d4c4a54ad08136896005f 212 SMART SM01007 13 192 5.5E-55 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM460_RS05020 65fb447cec3050795b513dd9a2f962e2 205 Pfam PF03458 UPF0126 domain 5 79 1.6E-18 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AM460_RS05020 65fb447cec3050795b513dd9a2f962e2 205 Pfam PF03458 UPF0126 domain 91 164 7.3E-22 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AM460_RS24350 492a3f5a9e1b76a8e5c0b23594a21fe3 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.3E-28 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM460_RS24350 492a3f5a9e1b76a8e5c0b23594a21fe3 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 56.675 T 29-03-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM460_RS24350 492a3f5a9e1b76a8e5c0b23594a21fe3 193 PIRSF PIRSF011489 1 193 6.6E-86 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM460_RS24755 731e183629abef6bf90692cccf65e716 677 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 501 8.4E-175 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM460_RS24755 731e183629abef6bf90692cccf65e716 677 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 3.7E-182 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM460_RS24755 731e183629abef6bf90692cccf65e716 677 ProSitePatterns PS01303 BCCT family of transporters signature. 318 327 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS05805 3bc6691779aee6283353b926074eddf8 207 Pfam PF13460 NAD(P)H-binding 9 190 8.8E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS05805 3bc6691779aee6283353b926074eddf8 207 Gene3D G3DSA:3.40.50.720 2 200 8.0E-21 T 29-03-2018 AM460_RS05805 3bc6691779aee6283353b926074eddf8 207 SUPERFAMILY SSF51735 5 202 2.23E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AM460_RS18620 d8306ad7647b8d97563e1b811bd6b1c6 43 Pfam PF13064 Protein of unknown function (DUF3927) 1 37 7.4E-27 T 29-03-2018 IPR025169 Protein of unknown function DUF3927 AM460_RS21325 d87cde9385d84e0577c1be72f0daf9a7 51 Pfam PF06528 Phage P2 GpE 13 48 2.3E-22 T 29-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 AM460_RS07710 3182b332d3bf53110c047a967d45302d 191 Pfam PF04972 BON domain 124 188 5.1E-18 T 29-03-2018 IPR007055 BON domain AM460_RS07710 3182b332d3bf53110c047a967d45302d 191 Pfam PF04972 BON domain 46 113 3.3E-14 T 29-03-2018 IPR007055 BON domain AM460_RS07710 3182b332d3bf53110c047a967d45302d 191 SMART SM00749 129 191 9.4E-7 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM460_RS07710 3182b332d3bf53110c047a967d45302d 191 SMART SM00749 51 114 8.0E-13 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM460_RS13855 f2c6b25bed66e4c1a53c681b18985c7f 274 Pfam PF03824 High-affinity nickel-transport protein 13 273 3.0E-65 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM460_RS13855 f2c6b25bed66e4c1a53c681b18985c7f 274 Gene3D G3DSA:3.40.50.1980 38 163 3.8E-5 T 29-03-2018 AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 SUPERFAMILY SSF82689 181 278 2.48E-33 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 Pfam PF05552 Conserved TM helix 16 64 3.4E-13 T 29-03-2018 IPR008910 Conserved TM helix AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 Gene3D G3DSA:3.30.70.100 180 273 8.2E-31 T 29-03-2018 AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 Pfam PF00924 Mechanosensitive ion channel 72 268 1.7E-59 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 Gene3D G3DSA:2.30.30.60 129 179 2.7E-15 T 29-03-2018 AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 SUPERFAMILY SSF50182 114 179 6.87E-17 T 29-03-2018 IPR010920 LSM domain AM460_RS09560 efef4a345edb3eacc67b4b99c580b204 286 SUPERFAMILY SSF82861 28 112 7.98E-18 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM460_RS10175 30d94fa5849ce8c277a207eed59ba858 512 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 89 508 5.0E-167 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM460_RS10175 30d94fa5849ce8c277a207eed59ba858 512 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 50 508 1.2E-199 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM460_RS15740 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Gene3D G3DSA:1.10.10.710 22 82 6.4E-26 T 29-03-2018 AM460_RS15740 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Pfam PF07130 YebG protein 1 74 6.2E-34 T 29-03-2018 IPR009813 Uncharacterised protein family YebG AM460_RS26580 af3c6d0f564bd648d4adf535531c0249 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.8E-32 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM460_RS26580 af3c6d0f564bd648d4adf535531c0249 105 SUPERFAMILY SSF103481 5 103 2.09E-20 T 29-03-2018 AM460_RS00105 811f135353b5fe17d81e4a6abd9cbd08 228 SUPERFAMILY SSF75217 2 157 9.16E-31 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM460_RS00105 811f135353b5fe17d81e4a6abd9cbd08 228 Gene3D G3DSA:3.40.1280.10 2 163 1.7E-33 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM460_RS00105 811f135353b5fe17d81e4a6abd9cbd08 228 PIRSF PIRSF004808 1 228 3.0E-65 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM460_RS00105 811f135353b5fe17d81e4a6abd9cbd08 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 226 1.5E-83 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM460_RS00105 811f135353b5fe17d81e4a6abd9cbd08 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 9.7E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 TIGRFAM TIGR00746 arcC: carbamate kinase 2 296 2.1E-128 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PIRSF PIRSF000723 1 297 1.2E-111 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 Pfam PF00696 Amino acid kinase family 2 277 8.3E-28 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 Gene3D G3DSA:3.40.1160.10 1 297 3.4E-46 T 29-03-2018 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 SUPERFAMILY SSF53633 1 295 5.11E-71 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PRINTS PR01469 Bacterial carbamate kinase signature 201 216 5.1E-59 T 29-03-2018 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 5.1E-59 T 29-03-2018 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 5.1E-59 T 29-03-2018 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PRINTS PR01469 Bacterial carbamate kinase signature 72 90 5.1E-59 T 29-03-2018 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 5.1E-59 T 29-03-2018 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 5.1E-59 T 29-03-2018 AM460_RS23730 b2b0536be3c8e3035017c2e936923db2 297 PRINTS PR01469 Bacterial carbamate kinase signature 252 267 5.1E-59 T 29-03-2018 AM460_RS21100 58c992da3c25b3d858b977a7fb8fbe53 216 Gene3D G3DSA:1.20.1170.10 31 216 5.9E-5 T 29-03-2018 AM460_RS00640 d526f91c3249da88f671995e4d216fb2 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 1.9E-34 T 29-03-2018 IPR025299 CstA, C-terminal domain AM460_RS00640 d526f91c3249da88f671995e4d216fb2 716 Pfam PF02554 Carbon starvation protein CstA 34 405 1.7E-162 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AM460_RS18465 93c34ac44b46fdc4476f73a26632ade1 1157 Gene3D G3DSA:2.60.40.10 614 810 3.2E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM460_RS18465 93c34ac44b46fdc4476f73a26632ade1 1157 Pfam PF13550 Putative phage tail protein 331 494 8.5E-37 T 29-03-2018 IPR032876 Tip attachment protein J AM460_RS18465 93c34ac44b46fdc4476f73a26632ade1 1157 SUPERFAMILY SSF49265 617 719 3.78E-5 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM460_RS18465 93c34ac44b46fdc4476f73a26632ade1 1157 Pfam PF09327 Domain of unknown function (DUF1983) 871 951 4.8E-22 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 AM460_RS18465 93c34ac44b46fdc4476f73a26632ade1 1157 Pfam PF12421 Fibronectin type III protein 975 1115 1.4E-39 T 29-03-2018 IPR021034 Domain of unknown function, DUF3672 AM460_RS00750 e5b60efd5b317491c57ba470fbfae8d2 286 Gene3D G3DSA:2.120.10.30 44 286 7.9E-12 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM460_RS00750 e5b60efd5b317491c57ba470fbfae8d2 286 SUPERFAMILY SSF50956 15 282 8.24E-39 T 29-03-2018 AM460_RS00750 e5b60efd5b317491c57ba470fbfae8d2 286 Pfam PF06977 SdiA-regulated 38 281 6.3E-92 T 29-03-2018 IPR009722 SdiA-regulated AM460_RS14365 57f205d586bef5793d0e231b0ced8792 356 Pfam PF01734 Patatin-like phospholipase 9 238 1.3E-19 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM460_RS14365 57f205d586bef5793d0e231b0ced8792 356 SUPERFAMILY SSF52151 4 80 1.34E-34 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS14365 57f205d586bef5793d0e231b0ced8792 356 SUPERFAMILY SSF52151 123 282 1.34E-34 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM460_RS14365 57f205d586bef5793d0e231b0ced8792 356 Gene3D G3DSA:3.40.1090.10 2 336 4.8E-29 T 29-03-2018 AM460_RS11370 d30833677061d7e113829b51bee8f565 121 Pfam PF10973 Protein of unknown function (DUF2799) 32 111 3.0E-17 T 29-03-2018 IPR021242 Protein of unknown function DUF2799 AM460_RS01685 dfbf6e0e9c88d2cca647528eb8bac4df 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM460_RS01685 dfbf6e0e9c88d2cca647528eb8bac4df 258 Gene3D G3DSA:3.90.226.10 1 258 1.4E-60 T 29-03-2018 AM460_RS01685 dfbf6e0e9c88d2cca647528eb8bac4df 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 257 2.1E-45 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM460_RS01685 dfbf6e0e9c88d2cca647528eb8bac4df 258 SUPERFAMILY SSF52096 1 256 9.78E-63 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM460_RS19305 a55b93dd6c48bdb5a80b2aa35f912a2e 84 Pfam PF04226 Transglycosylase associated protein 34 83 1.3E-13 T 29-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AM460_RS18005 a235e41286a7eb789939a244922ffe69 242 Gene3D G3DSA:3.40.630.10 37 235 1.9E-28 T 29-03-2018 AM460_RS18005 a235e41286a7eb789939a244922ffe69 242 SUPERFAMILY SSF53187 129 234 3.31E-33 T 29-03-2018 AM460_RS18005 a235e41286a7eb789939a244922ffe69 242 SUPERFAMILY SSF53187 16 102 3.31E-33 T 29-03-2018 AM460_RS18005 a235e41286a7eb789939a244922ffe69 242 Pfam PF00246 Zinc carboxypeptidase 73 157 1.3E-12 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AM460_RS13345 d307ccb7224a87bc3686037bd68ee470 69 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 1.9E-16 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM460_RS13345 d307ccb7224a87bc3686037bd68ee470 69 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 2.2E-19 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM460_RS23965 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Pfam PF00294 pfkB family carbohydrate kinase 79 293 5.6E-9 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM460_RS23965 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Gene3D G3DSA:3.40.1190.20 32 431 4.1E-43 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS23965 f8f4894b2ba9ef23ee23d36a37b7e00f 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM460_RS23965 f8f4894b2ba9ef23ee23d36a37b7e00f 434 SUPERFAMILY SSF53613 36 305 3.12E-45 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS23965 f8f4894b2ba9ef23ee23d36a37b7e00f 434 SUPERFAMILY SSF53613 338 416 3.12E-45 T 29-03-2018 IPR029056 Ribokinase-like AM460_RS08050 266318c1ddc0dd83f4ce8c79ddb601df 783 Gene3D G3DSA:2.70.98.50 26 254 2.6E-90 T 29-03-2018 AM460_RS08050 266318c1ddc0dd83f4ce8c79ddb601df 783 Gene3D G3DSA:1.10.287.100 256 293 3.5E-19 T 29-03-2018 AM460_RS08050 266318c1ddc0dd83f4ce8c79ddb601df 783 Pfam PF01204 Trehalase 414 761 2.1E-10 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM460_RS08050 266318c1ddc0dd83f4ce8c79ddb601df 783 SUPERFAMILY SSF48208 558 779 4.54E-85 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM460_RS08050 266318c1ddc0dd83f4ce8c79ddb601df 783 SUPERFAMILY SSF48208 270 530 4.54E-85 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM460_RS08050 266318c1ddc0dd83f4ce8c79ddb601df 783 Gene3D G3DSA:1.50.10.10 295 783 1.5E-100 T 29-03-2018 AM460_RS09535 8d7febbe28bd7321554cb697d9c361c0 143 Gene3D G3DSA:3.30.1330.80 12 143 9.2E-36 T 29-03-2018 AM460_RS09535 8d7febbe28bd7321554cb697d9c361c0 143 Pfam PF03479 Domain of unknown function (DUF296) 14 119 6.4E-22 T 29-03-2018 IPR005175 PPC domain AM460_RS09535 8d7febbe28bd7321554cb697d9c361c0 143 SUPERFAMILY SSF117856 10 140 1.57E-32 T 29-03-2018 AM460_RS22355 269cbc4f01d6e8320cc644935a905f52 377 Pfam PF12698 ABC-2 family transporter protein 29 370 2.3E-37 T 29-03-2018 AM460_RS22355 269cbc4f01d6e8320cc644935a905f52 377 Gene3D G3DSA:3.40.1710.10 45 196 2.2E-22 T 29-03-2018 AM460_RS03675 7af7c71623053cc55d5bd31d5c8f3c9b 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.351 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM460_RS03675 7af7c71623053cc55d5bd31d5c8f3c9b 145 SUPERFAMILY SSF69500 1 144 4.45E-57 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM460_RS03675 7af7c71623053cc55d5bd31d5c8f3c9b 145 Gene3D G3DSA:3.50.80.10 1 145 1.2E-55 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM460_RS03675 7af7c71623053cc55d5bd31d5c8f3c9b 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 6.0E-55 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM460_RS03675 7af7c71623053cc55d5bd31d5c8f3c9b 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 3.7E-77 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM460_RS04090 2e36ba404ad656ec808ce9512e699f36 126 ProDom PD031864 YIGF SIMILAR ESCHERICHIA COLI MEMBRANE XCC4223 XAC4357 XAC2195 1 126 9.0E-50 T 29-03-2018 AM460_RS04090 2e36ba404ad656ec808ce9512e699f36 126 Pfam PF10947 Protein of unknown function (DUF2628) 12 117 9.4E-11 T 29-03-2018 IPR024399 Protein of unknown function DUF2628 AM460_RS27470 cbec3d3ef72402d88746cbe5e7f92789 114 PIRSF PIRSF003269 1 114 3.6E-64 T 29-03-2018 IPR016385 Conjugal transfer repressor TrbA AM460_RS17800 154aa2ae790840fecf26a13108b409a4 266 Pfam PF02698 DUF218 domain 40 173 1.6E-15 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AM460_RS17800 154aa2ae790840fecf26a13108b409a4 266 Gene3D G3DSA:1.10.3620.10 150 254 4.8E-39 T 29-03-2018 AM460_RS26315 e1aa9a0f12208a37c33eda9f1d979318 457 Gene3D G3DSA:1.20.1250.20 27 225 1.1E-12 T 29-03-2018 AM460_RS26315 e1aa9a0f12208a37c33eda9f1d979318 457 Pfam PF13347 MFS/sugar transport protein 23 439 4.1E-82 T 29-03-2018 AM460_RS26315 e1aa9a0f12208a37c33eda9f1d979318 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 21 453 4.7E-108 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM460_RS26315 e1aa9a0f12208a37c33eda9f1d979318 457 SUPERFAMILY SSF103473 39 442 1.57E-31 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS26315 e1aa9a0f12208a37c33eda9f1d979318 457 Gene3D G3DSA:1.20.1250.20 228 444 4.5E-13 T 29-03-2018 AM460_RS10320 a1d2a6e6cf8b5784cab8c8694eea6e81 149 Gene3D G3DSA:3.40.50.360 1 149 8.0E-28 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10320 a1d2a6e6cf8b5784cab8c8694eea6e81 149 SUPERFAMILY SSF52218 1 148 2.42E-38 T 29-03-2018 IPR029039 Flavoprotein-like domain AM460_RS10320 a1d2a6e6cf8b5784cab8c8694eea6e81 149 PRINTS PR00369 Flavodoxin signature 53 64 2.2E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM460_RS10320 a1d2a6e6cf8b5784cab8c8694eea6e81 149 PRINTS PR00369 Flavodoxin signature 108 127 2.2E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM460_RS10320 a1d2a6e6cf8b5784cab8c8694eea6e81 149 PRINTS PR00369 Flavodoxin signature 84 94 2.2E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM460_RS10320 a1d2a6e6cf8b5784cab8c8694eea6e81 149 Pfam PF00258 Flavodoxin 6 140 1.7E-24 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM460_RS12190 7045a9a9b315694d9a18e58201cd2e9e 474 SUPERFAMILY SSF55604 9 82 8.24E-17 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS12190 7045a9a9b315694d9a18e58201cd2e9e 474 Gene3D G3DSA:3.30.1360.60 7 83 1.4E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM460_RS12190 7045a9a9b315694d9a18e58201cd2e9e 474 Pfam PF02378 Phosphotransferase system, EIIC 120 401 3.2E-41 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM460_RS12190 7045a9a9b315694d9a18e58201cd2e9e 474 Pfam PF00367 phosphotransferase system, EIIB 13 44 1.4E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS12190 7045a9a9b315694d9a18e58201cd2e9e 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM460_RS28050 98ff56b07aa3397bfaf78d8e3fff8701 106 SUPERFAMILY SSF103473 2 103 9.81E-5 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS15635 23e694631cab873db1fde02990ca2ce0 188 Gene3D G3DSA:3.40.50.850 1 188 4.0E-44 T 29-03-2018 AM460_RS15635 23e694631cab873db1fde02990ca2ce0 188 Pfam PF00857 Isochorismatase family 9 182 7.9E-39 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS15635 23e694631cab873db1fde02990ca2ce0 188 SUPERFAMILY SSF52499 4 188 3.79E-50 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM460_RS21480 8c9d42ac8a6f9760509120c162010ec8 91 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 3 78 3.0E-38 T 29-03-2018 IPR020284 Protein of unknown function CP83 AM460_RS21480 8c9d42ac8a6f9760509120c162010ec8 91 Pfam PF17399 Domain of unknown function (DUF5405) 7 88 9.8E-11 T 29-03-2018 IPR035404 Domain of unknown function DUF5405 AM460_RS27790 5fdeccb6114900b424528f7ecdb403de 338 Pfam PF01609 Transposase DDE domain 150 324 1.3E-31 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM460_RS27790 5fdeccb6114900b424528f7ecdb403de 338 Pfam PF05598 Transposase domain (DUF772) 63 136 3.8E-21 T 29-03-2018 IPR008490 Transposase InsH, N-terminal AM460_RS22385 130574c61c401441d6d0e7c6d61f44e1 237 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 223 4.8E-12 T 29-03-2018 IPR006214 Bax inhibitor 1-related AM460_RS28030 efb9d12e1d893d199fda959498bac118 141 PIRSF PIRSF003271 12 139 5.8E-39 T 29-03-2018 IPR016386 Plasmid mobilisation, TrbF AM460_RS22400 708230ee3709c47087a57b470028490b 81 Pfam PF02597 ThiS family 4 81 3.3E-22 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM460_RS22400 708230ee3709c47087a57b470028490b 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.9E-24 T 29-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 AM460_RS22400 708230ee3709c47087a57b470028490b 81 Gene3D G3DSA:3.10.20.30 1 81 1.1E-19 T 29-03-2018 IPR012675 Beta-grasp domain AM460_RS22400 708230ee3709c47087a57b470028490b 81 SUPERFAMILY SSF54285 1 81 1.07E-23 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM460_RS12735 5c50ada9f55248c77e70969235d76163 331 PIRSF PIRSF020588 2 331 6.7E-154 T 29-03-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 AM460_RS11395 56a38ea72f0be578bfef7f17b93bd275 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 8.0E-22 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS11395 56a38ea72f0be578bfef7f17b93bd275 113 Gene3D G3DSA:3.30.160.100 1 99 2.1E-27 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS11395 56a38ea72f0be578bfef7f17b93bd275 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 7.1E-36 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS11395 56a38ea72f0be578bfef7f17b93bd275 113 SUPERFAMILY SSF69754 3 111 8.37E-34 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM460_RS11190 1f30d81c00f76036c776909586c216ff 192 PIRSF PIRSF004395 1 192 2.3E-88 T 29-03-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail AM460_RS11190 1f30d81c00f76036c776909586c216ff 192 Pfam PF06763 Prophage minor tail protein Z (GPZ) 1 192 1.6E-74 T 29-03-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail AM460_RS19860 970691c586268392308a3c8b02bd0497 79 Pfam PF13973 Domain of unknown function (DUF4222) 4 53 1.7E-18 T 29-03-2018 IPR025317 Protein of unknown function DUF4222 AM460_RS12615 638e7bfc7f0395da44c390897d13ecfb 446 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 446 1.7E-151 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM460_RS12615 638e7bfc7f0395da44c390897d13ecfb 446 SUPERFAMILY SSF56935 26 446 2.38E-109 T 29-03-2018 AM460_RS12615 638e7bfc7f0395da44c390897d13ecfb 446 Gene3D G3DSA:2.40.160.60 26 446 1.1E-87 T 29-03-2018 AM460_RS26570 7a33ea9e8988c2d664f38e5d909d8ab8 381 Pfam PF00144 Beta-lactamase 32 379 6.5E-87 T 29-03-2018 IPR001466 Beta-lactamase-related AM460_RS26570 7a33ea9e8988c2d664f38e5d909d8ab8 381 Gene3D G3DSA:3.40.710.10 19 381 1.9E-73 T 29-03-2018 AM460_RS26570 7a33ea9e8988c2d664f38e5d909d8ab8 381 SUPERFAMILY SSF56601 24 380 9.77E-103 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS26570 7a33ea9e8988c2d664f38e5d909d8ab8 381 ProSitePatterns PS00336 Beta-lactamase class-C active site. 80 87 - T 29-03-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 AM460_RS18995 c346b9fb16e04ffe7778f4491b5aa784 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 1 365 1.0E-128 T 29-03-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM460_RS18995 c346b9fb16e04ffe7778f4491b5aa784 366 Pfam PF01699 Sodium/calcium exchanger protein 223 364 3.5E-9 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM460_RS18995 c346b9fb16e04ffe7778f4491b5aa784 366 Pfam PF01699 Sodium/calcium exchanger protein 40 190 3.3E-14 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM460_RS11125 9aa0bebcd9defb5bcfa4e6363017a673 67 Gene3D G3DSA:1.10.10.10 1 64 8.7E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS26715 ca3cb6b44e07a951f0a91729cc859cec 356 Gene3D G3DSA:3.40.30.10 205 334 1.1E-12 T 29-03-2018 AM460_RS26715 ca3cb6b44e07a951f0a91729cc859cec 356 Pfam PF13098 Thioredoxin-like domain 208 328 1.7E-6 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS26715 ca3cb6b44e07a951f0a91729cc859cec 356 SUPERFAMILY SSF52833 202 328 8.13E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AM460_RS11255 d422be8a8ed63401e315acde05f5889a 194 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 72 191 5.5E-40 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS08015 75183c57f10403186addf4d29960bea2 230 Pfam PF02698 DUF218 domain 64 179 4.1E-20 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AM460_RS08015 75183c57f10403186addf4d29960bea2 230 Gene3D G3DSA:3.40.50.620 49 178 5.7E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM460_RS14920 06fc43f4d8fe0d35237de79ebe9ef69b 154 Pfam PF03748 Flagellar basal body-associated protein FliL 56 152 1.5E-19 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AM460_RS09530 5fbbe4390c9a552ee311af428eef9532 192 Pfam PF12822 ECF transporter, substrate-specific component 10 173 2.1E-10 T 29-03-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 AM460_RS22855 f0406faac8b1ec3e482d3820d2abdc1d 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 7 29 2.5E-5 T 29-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AM460_RS22855 f0406faac8b1ec3e482d3820d2abdc1d 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 5.7E-9 T 29-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AM460_RS08830 9b1fdea17ea591f41639e514c4a7365b 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 9.1E-59 T 29-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system AM460_RS26405 a6b72cdde1df3c9de34ccf3d6af1acb3 87 Pfam PF10554 Ash protein family 11 48 1.1E-7 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein AM460_RS16700 3287a6f2b9acbd908d9f59dd0fc43f64 534 Pfam PF13454 FAD-NAD(P)-binding 5 164 3.4E-29 T 29-03-2018 AM460_RS16700 3287a6f2b9acbd908d9f59dd0fc43f64 534 SUPERFAMILY SSF51905 1 269 7.51E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS16700 3287a6f2b9acbd908d9f59dd0fc43f64 534 Gene3D G3DSA:3.50.50.60 2 531 2.2E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS13995 4f80daed540af147c45fc9fbfc84422b 18 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 18 6.2E-11 T 29-03-2018 IPR025881 Toxin Ibs AM460_RS13100 a0e2361decaf4c3fe669247097fdc86b 267 Gene3D G3DSA:3.20.20.60 1 266 6.5E-54 T 29-03-2018 AM460_RS13100 a0e2361decaf4c3fe669247097fdc86b 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 7.8E-69 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM460_RS13100 a0e2361decaf4c3fe669247097fdc86b 267 Hamap MF_01290 2-keto-3-deoxy-L-rhamnonate aldolase [rhmA]. 1 267 75.246 T 29-03-2018 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase GO:0016832 KEGG: 00051+4.1.2.53|MetaCyc: PWY-6713 AM460_RS13100 a0e2361decaf4c3fe669247097fdc86b 267 SUPERFAMILY SSF51621 4 255 1.07E-82 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM460_RS08860 12aa0841ba10c1b867fd6f61080a2c77 272 Pfam PF06067 Domain of unknown function (DUF932) 36 261 1.0E-53 T 29-03-2018 IPR026325 Protein of unknown function DUF932 AM460_RS18685 3d8afa147ea7a0119620a589a9a344e4 141 Pfam PF06163 Bacterial protein of unknown function (DUF977) 1 135 4.0E-31 T 29-03-2018 IPR010382 Protein of unknown function DUF977 AM460_RS00645 64ebf211c2df241d1e2cc73dd08a01e7 67 Pfam PF04328 Selenoprotein, putative 5 67 1.3E-27 T 29-03-2018 IPR007423 Selenoprotein, putative AM460_RS21155 7573f3069275f91098aec2323804d68e 148 Pfam PF07030 Protein of unknown function (DUF1320) 2 132 4.9E-37 T 29-03-2018 IPR009752 Bacteriophage Mu, Gp36 AM460_RS00325 7573f3069275f91098aec2323804d68e 148 Pfam PF07030 Protein of unknown function (DUF1320) 2 132 4.9E-37 T 29-03-2018 IPR009752 Bacteriophage Mu, Gp36 AM460_RS10135 3d2757cc1a898ac90b9d2d2f9e848b05 175 Pfam PF11745 Protein of unknown function (DUF3304) 62 145 2.1E-7 T 29-03-2018 IPR021733 Protein of unknown function DUF3304 AM460_RS15795 74fdeb5058e2b008d6d7f03a381ce213 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 1.3E-35 T 29-03-2018 IPR009954 Protein of unknown function DUF1482 AM460_RS10235 3dca18030d360a2d65805a168ed98b5d 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.8E-23 T 29-03-2018 IPR006696 Protein of unknown function DUF423 AM460_RS00255 2196dba204ced547d1588fc8a1d30180 367 Pfam PF04865 Baseplate J-like protein 70 327 5.3E-73 T 29-03-2018 IPR006949 Baseplate protein J-like AM460_RS00255 2196dba204ced547d1588fc8a1d30180 367 PIRSF PIRSF020481 1 366 2.0E-99 T 29-03-2018 IPR014507 Baseplate assembly protein J, predicted AM460_RS07705 c158c95b96b63777722fe061bd0c8527 346 Pfam PF03773 Predicted permease 56 161 4.1E-14 T 29-03-2018 IPR005524 Predicted permease DUF318 AM460_RS07705 c158c95b96b63777722fe061bd0c8527 346 Pfam PF03773 Predicted permease 73 340 1.0E-28 T 29-03-2018 IPR005524 Predicted permease DUF318 AM460_RS20030 0ccbf50d0ac0a7b79b67ec74f9febbc1 341 Gene3D G3DSA:3.20.20.300 1 341 8.2E-80 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS20030 0ccbf50d0ac0a7b79b67ec74f9febbc1 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM460_RS20030 0ccbf50d0ac0a7b79b67ec74f9febbc1 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.802 T 29-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM460_RS20030 0ccbf50d0ac0a7b79b67ec74f9febbc1 341 SUPERFAMILY SSF51445 3 316 4.42E-86 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM460_RS20030 0ccbf50d0ac0a7b79b67ec74f9febbc1 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 318 2.6E-101 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM460_RS09940 ec3710bdce58c83c1c423dbf2ef76d99 237 Pfam PF03741 Integral membrane protein TerC family 17 203 2.1E-52 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM460_RS08810 4abfc6b074b689f9ada0e72b695775b2 131 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 10 55 6.6E-6 T 29-03-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin AM460_RS05005 4181cf83cf26ea2fecc18adef347d76c 91 SUPERFAMILY SSF63562 1 79 8.2E-25 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM460_RS05005 4181cf83cf26ea2fecc18adef347d76c 91 Gene3D G3DSA:3.90.940.10 1 91 5.9E-28 T 29-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM460_RS05005 4181cf83cf26ea2fecc18adef347d76c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS05005 4181cf83cf26ea2fecc18adef347d76c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM460_RS05005 4181cf83cf26ea2fecc18adef347d76c 91 SMART SM01409 8 61 1.3E-15 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM460_RS05005 4181cf83cf26ea2fecc18adef347d76c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.9E-15 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM460_RS14875 72e2520f273898f23d559569705062d9 75 Pfam PF10733 Protein of unknown function (DUF2525) 18 75 2.4E-33 T 29-03-2018 IPR019669 Uncharacterised bacterial stress protein YodD AM460_RS00655 bae8860759b16cac548d127fe37fc966 100 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 37 93 1.0E-17 T 29-03-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system AM460_RS13175 2696a0761b997da423a849b34e18724d 562 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 16 559 4.5E-241 T 29-03-2018 IPR018671 Protein of unknown function DUF2138 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 Gene3D G3DSA:2.40.230.20 26 294 1.1E-80 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 SUPERFAMILY SSF111364 32 294 5.23E-90 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 4.8E-82 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS24315 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 2.7E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM460_RS14085 3fb7ee31f03f4132d8cc1fed2baf4a40 292 Pfam PF00483 Nucleotidyl transferase 5 241 5.2E-74 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM460_RS14085 3fb7ee31f03f4132d8cc1fed2baf4a40 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 1.7E-164 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM460_RS14085 3fb7ee31f03f4132d8cc1fed2baf4a40 292 SUPERFAMILY SSF53448 4 289 9.86E-98 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS14085 3fb7ee31f03f4132d8cc1fed2baf4a40 292 Gene3D G3DSA:3.90.550.10 5 292 1.1E-74 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM460_RS26375 8ce8a3e2be9e527eea7a8d006959b245 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 92 6.8E-16 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM460_RS26375 8ce8a3e2be9e527eea7a8d006959b245 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 92 4.5E-8 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM460_RS26375 8ce8a3e2be9e527eea7a8d006959b245 93 Gene3D G3DSA:3.30.2310.20 1 91 5.5E-7 T 29-03-2018 AM460_RS12460 e0eace5fc5513bb6b5255dc24be24e8c 210 Pfam PF10938 YfdX protein 55 205 1.5E-46 T 29-03-2018 IPR021236 Uncharacterised protein family YfdX AM460_RS17735 1ac7195a7f8a3f832140dcf4d595aa8c 179 Gene3D G3DSA:3.40.630.30 1 178 9.9E-24 T 29-03-2018 AM460_RS17735 1ac7195a7f8a3f832140dcf4d595aa8c 179 SUPERFAMILY SSF55729 7 175 3.78E-43 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS17735 1ac7195a7f8a3f832140dcf4d595aa8c 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 2.6E-21 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS28080 3d389b6f78b70175db29480c159d066e 86 Pfam PF11100 Conjugal transfer protein TrbE 11 70 2.5E-15 T 29-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE AM460_RS28080 3d389b6f78b70175db29480c159d066e 86 ProDom PD028820 PLASMID TRBE CONJUGATIVE TRANSFER MEMBRANE TRANSMEMBRANE INNER 10 73 6.0E-29 T 29-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE AM460_RS06955 edc9be11bc26a002d33a77c99671d51f 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 72 3.4E-23 T 29-03-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain AM460_RS02835 60703ed43b255e006d148e32d78d30ea 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 25.437 T 29-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM460_RS02835 60703ed43b255e006d148e32d78d30ea 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 2.1E-16 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AM460_RS02835 60703ed43b255e006d148e32d78d30ea 136 PIRSF PIRSF029598 1 136 2.1E-53 T 29-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM460_RS15095 33fb3d053aad10fe4b94b1aac17a4bd1 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 1.1E-36 T 29-03-2018 AM460_RS18080 31d267a4e80d9caed27ae117032c4ea9 293 Gene3D G3DSA:1.10.3720.10 13 287 1.8E-52 T 29-03-2018 AM460_RS18080 31d267a4e80d9caed27ae117032c4ea9 293 SUPERFAMILY SSF161098 58 282 3.53E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS18080 31d267a4e80d9caed27ae117032c4ea9 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 281 1.0E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS19000 4b2d8ed7d5b5bd20f0f50e2ef664c1a4 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 3.9E-23 T 29-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr AM460_RS10830 7dba39328cde732f18c77a4933ff15b3 142 Pfam PF09335 SNARE associated Golgi protein 26 131 5.5E-10 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS08515 41cd95fed8352133b976830ca3ed6a6f 219 Pfam PF09335 SNARE associated Golgi protein 48 173 8.0E-19 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS09445 73340d20313520da6931f65a511eadf0 43 ProDom PD050163 YQGB INNER MEMBRANE STY3241 1 39 2.0E-16 T 29-03-2018 IPR020196 Uncharacterised protein family YqgB AM460_RS09445 73340d20313520da6931f65a511eadf0 43 Pfam PF11036 Virulence promoting factor 1 43 2.9E-33 T 29-03-2018 IPR020196 Uncharacterised protein family YqgB AM460_RS27570 730985db70e357b11ae2671ccf05bdea 239 Pfam PF06952 PsiA protein 2 235 3.6E-77 T 29-03-2018 IPR009713 Uncharacterised protein family PsiA AM460_RS20170 a1c23fed22f5654f2ba02bd709f0ae4e 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 28.091 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM460_RS20170 a1c23fed22f5654f2ba02bd709f0ae4e 232 Pfam PF02107 Flagellar L-ring protein 47 231 2.4E-60 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM460_RS20170 a1c23fed22f5654f2ba02bd709f0ae4e 232 PRINTS PR01008 Flagellar L-ring protein signature 73 85 1.8E-36 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM460_RS20170 a1c23fed22f5654f2ba02bd709f0ae4e 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 1.8E-36 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM460_RS20170 a1c23fed22f5654f2ba02bd709f0ae4e 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 1.8E-36 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM460_RS20170 a1c23fed22f5654f2ba02bd709f0ae4e 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 1.8E-36 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM460_RS20170 a1c23fed22f5654f2ba02bd709f0ae4e 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 1.8E-36 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM460_RS15345 e057a1dcd915b0377706b0c273be5a2d 139 Pfam PF14000 DNA packaging protein FI 3 133 9.6E-9 T 29-03-2018 IPR025147 DNA packaging protein FI AM460_RS04225 103f1949edab5a23c4977b7cc453d1ee 450 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 446 1.0E-263 T 29-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 AM460_RS04225 103f1949edab5a23c4977b7cc453d1ee 450 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 43.009 T 29-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 AM460_RS11295 9eddc944709ec6ef4afe37deef2da94e 113 Gene3D G3DSA:3.30.1450.10 35 107 6.1E-11 T 29-03-2018 AM460_RS11295 9eddc944709ec6ef4afe37deef2da94e 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 34.055 T 29-03-2018 IPR026592 Outer membrane protein assembly factor BamE AM460_RS11295 9eddc944709ec6ef4afe37deef2da94e 113 Pfam PF04355 SmpA / OmlA family 35 104 4.4E-27 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM460_RS14095 966e687222d5a53aad82a94b358bb36b 419 Pfam PF01943 Polysaccharide biosynthesis protein 3 281 4.1E-19 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM460_RS21240 7ac72415866f3dc006a331209677a833 153 Gene3D G3DSA:3.90.1340.10 1 52 1.6E-19 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS21240 7ac72415866f3dc006a331209677a833 153 SUPERFAMILY SSF88874 4 152 1.22E-36 T 29-03-2018 AM460_RS21240 7ac72415866f3dc006a331209677a833 153 Pfam PF07484 Phage Tail Collar Domain 10 57 1.3E-14 T 29-03-2018 IPR011083 Phage tail collar domain AM460_RS21240 7ac72415866f3dc006a331209677a833 153 Gene3D G3DSA:4.10.1070.10 53 145 1.7E-15 T 29-03-2018 AM460_RS20385 81e30ecf38cdb07c6e8dcfc6d04c85a1 129 Pfam PF10627 Curli assembly protein CsgE 27 128 2.4E-33 T 29-03-2018 IPR018900 Curli assembly protein CsgE AM460_RS06340 cc095b83713ec956035336e441074964 136 Gene3D G3DSA:1.10.10.60 82 132 3.2E-4 T 29-03-2018 AM460_RS06340 cc095b83713ec956035336e441074964 136 Pfam PF04754 Putative transposase, YhgA-like 13 53 5.9E-7 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like AM460_RS12945 26e88bb20aa45666ba298fd045b8a027 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.378 T 29-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM460_RS12945 26e88bb20aa45666ba298fd045b8a027 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 8.1E-21 T 29-03-2018 AM460_RS01640 5dadf855b1a162954eaa653c0c77b7ae 321 Pfam PF00892 EamA-like transporter family 3 134 2.0E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM460_RS01640 5dadf855b1a162954eaa653c0c77b7ae 321 SUPERFAMILY SSF103481 43 137 3.92E-9 T 29-03-2018 AM460_RS26865 fd65d43b4a61f6e14d0a361da272f214 144 Pfam PF07128 Protein of unknown function (DUF1380) 1 136 2.2E-67 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 AM460_RS16775 1dbc92244904a599dede070adc915e31 389 Gene3D G3DSA:1.20.1250.20 191 384 8.6E-17 T 29-03-2018 AM460_RS16775 1dbc92244904a599dede070adc915e31 389 Pfam PF07690 Major Facilitator Superfamily 10 322 1.4E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS16775 1dbc92244904a599dede070adc915e31 389 Gene3D G3DSA:1.20.1250.20 3 190 6.8E-24 T 29-03-2018 AM460_RS16775 1dbc92244904a599dede070adc915e31 389 SUPERFAMILY SSF103473 6 379 2.09E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS22975 4c2bd9b021137e9aa41b9a127ce4eb91 252 Pfam PF03741 Integral membrane protein TerC family 15 205 5.7E-48 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM460_RS20645 8c1b585e7dbff1a7560d1b255f066a81 514 PIRSF PIRSF006446 355 514 5.0E-36 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM460_RS20645 8c1b585e7dbff1a7560d1b255f066a81 514 PIRSF PIRSF006446 1 333 3.6E-119 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM460_RS20645 8c1b585e7dbff1a7560d1b255f066a81 514 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.4E-177 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM460_RS21095 108c937072c9b3ca4318e0ba2bd01341 246 SUPERFAMILY SSF53955 75 241 1.69E-33 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS21095 108c937072c9b3ca4318e0ba2bd01341 246 Gene3D G3DSA:1.10.530.10 55 232 6.2E-27 T 29-03-2018 AM460_RS21095 108c937072c9b3ca4318e0ba2bd01341 246 Pfam PF01464 Transglycosylase SLT domain 97 193 3.5E-13 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS16665 cec23b87dbcb2822c751fda67bdbd9a6 69 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 69 5.0E-34 T 29-03-2018 AM460_RS16665 cec23b87dbcb2822c751fda67bdbd9a6 69 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 1.8E-34 T 29-03-2018 IPR024493 Fumarase D AM460_RS04055 2f65f64caa5f405b22c0faa2b849c9f8 286 Pfam PF04754 Putative transposase, YhgA-like 6 207 2.4E-83 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like AM460_RS04055 2f65f64caa5f405b22c0faa2b849c9f8 286 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 283 1.6E-53 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM460_RS12800 685f31e784c817259980d418e4eca207 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 3.8E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS12800 685f31e784c817259980d418e4eca207 228 SUPERFAMILY SSF161098 7 205 1.1E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS12800 685f31e784c817259980d418e4eca207 228 Gene3D G3DSA:1.10.3720.10 2 224 6.7E-38 T 29-03-2018 AM460_RS12800 685f31e784c817259980d418e4eca207 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 7.8E-19 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM460_RS26730 78672672cdf1c33122b5010abb0f1e9c 110 Gene3D G3DSA:1.10.1220.10 15 53 7.0E-6 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS05255 acf1c175b982a03ecd877fb3c8e5bb5b 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 6.0E-33 T 29-03-2018 IPR021230 Protein of unknown function DUF2810 AM460_RS08085 cdccbcc9edbe0d90a5e314971b79dca6 110 SUPERFAMILY SSF50249 8 109 1.37E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM460_RS08085 cdccbcc9edbe0d90a5e314971b79dca6 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.7E-31 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM460_RS08085 cdccbcc9edbe0d90a5e314971b79dca6 110 Gene3D G3DSA:2.40.50.140 7 110 3.2E-34 T 29-03-2018 AM460_RS02575 52258828d5982dfc68a479832f1b944c 449 Pfam PF00860 Permease family 26 409 1.3E-88 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS27450 e008ba1118cfb5a0bef72a8898ab5d9b 141 PIRSF PIRSF003271 12 139 2.7E-73 T 29-03-2018 IPR016386 Plasmid mobilisation, TrbF AM460_RS26465 84a45bfd99710408f29863c7d6bc735a 560 Pfam PF07655 Secretin N-terminal domain 204 283 1.8E-15 T 29-03-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 AM460_RS26465 84a45bfd99710408f29863c7d6bc735a 560 Pfam PF00263 Bacterial type II and III secretion system protein 385 552 4.3E-11 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM460_RS26465 84a45bfd99710408f29863c7d6bc735a 560 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 63 551 1.1E-144 T 29-03-2018 IPR013359 Pilus formation type IVB, outer membrane PilN AM460_RS22175 bba9fa128425eff4e7f9f37a738546fe 321 Pfam PF01112 Asparaginase 5 311 1.8E-119 T 29-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AM460_RS22175 bba9fa128425eff4e7f9f37a738546fe 321 Gene3D G3DSA:3.60.20.30 179 321 9.5E-52 T 29-03-2018 AM460_RS22175 bba9fa128425eff4e7f9f37a738546fe 321 SUPERFAMILY SSF56235 4 309 1.47E-99 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM460_RS12180 51df061736055c82e24408a03a02458c 191 Gene3D G3DSA:2.60.460.10 31 190 5.4E-70 T 29-03-2018 AM460_RS12180 51df061736055c82e24408a03a02458c 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 2.0E-82 T 29-03-2018 IPR010938 Protein of unknown function DUF1131 AM460_RS12180 51df061736055c82e24408a03a02458c 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 8.0E-110 T 29-03-2018 IPR010938 Protein of unknown function DUF1131 AM460_RS27575 57ce8d31a49e8e9a9fe9eefdf1ae371e 144 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 5 142 3.6E-52 T 29-03-2018 IPR009385 Plasmid SOS inhibition AM460_RS12525 4d0ccae45639f0123673c3f661bed93f 75 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 15 64 6.9E-20 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM460_RS21685 57cd2c3022759d514d46c2770e4db9cd 164 Pfam PF05926 Phage head completion protein (GPL) 26 163 1.4E-48 T 29-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AM460_RS10055 88b9afa56fad56d21723d1cba5d0ab53 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 19 166 4.0E-33 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM460_RS10055 88b9afa56fad56d21723d1cba5d0ab53 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 159 7.8E-23 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM460_RS09170 3711b9081bcc7fd43e0faa9ea7ca6ebd 397 Pfam PF07690 Major Facilitator Superfamily 18 353 1.2E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM460_RS09170 3711b9081bcc7fd43e0faa9ea7ca6ebd 397 SUPERFAMILY SSF103473 9 394 3.01E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM460_RS09170 3711b9081bcc7fd43e0faa9ea7ca6ebd 397 Gene3D G3DSA:1.20.1250.20 11 213 4.5E-15 T 29-03-2018 AM460_RS09170 3711b9081bcc7fd43e0faa9ea7ca6ebd 397 Gene3D G3DSA:1.20.1250.20 214 397 4.2E-7 T 29-03-2018 AM460_RS10370 f67fe03d01de8d1f994e52f3a21e3ee7 290 Pfam PF04536 TPM domain 29 151 7.6E-32 T 29-03-2018 IPR007621 TPM domain AM460_RS10370 f67fe03d01de8d1f994e52f3a21e3ee7 290 Gene3D G3DSA:1.20.1070.10 93 270 8.8E-4 T 29-03-2018 AM460_RS13615 25039a1482469b5f2e4756711abe51d9 332 Pfam PF13407 Periplasmic binding protein domain 28 299 1.0E-63 T 29-03-2018 IPR025997 Periplasmic binding protein AM460_RS13615 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 20 116 8.6E-14 T 29-03-2018 AM460_RS13615 25039a1482469b5f2e4756711abe51d9 332 SUPERFAMILY SSF53822 25 330 2.94E-84 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM460_RS13615 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 122 332 1.4E-41 T 29-03-2018 AM460_RS03325 047f138079f946ebe9d1452906bbaa0f 359 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 10 335 2.8E-90 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM460_RS09435 32a3ada6b16c12c45827045566310c13 83 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 1 83 6.0E-43 T 29-03-2018 IPR020263 Uncharacterised protein family YqgD AM460_RS09435 32a3ada6b16c12c45827045566310c13 83 Pfam PF10885 Protein of unknown function (DUF2684) 3 79 3.3E-23 T 29-03-2018 IPR020263 Uncharacterised protein family YqgD AM460_RS04800 2f97e51edb6b8346e68036b4d2668b8c 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 1.3E-15 T 29-03-2018 IPR003807 Domain of unknown function DUF202 AM460_RS12775 9117bbc343b0b643f07748ca67d2c7ad 162 Pfam PF02674 Colicin V production protein 4 141 1.6E-35 T 29-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AM460_RS26505 fde01e436b30f3e7d363b3199e99f5c2 430 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 33 361 1.5E-187 T 29-03-2018 IPR007001 Bacterial shufflon protein, N-terminal AM460_RS26505 fde01e436b30f3e7d363b3199e99f5c2 430 SUPERFAMILY SSF54826 143 217 2.12E-5 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM460_RS09355 327a0b665a3829a39167c64a87f62e2d 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 156 1.5E-28 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AM460_RS21210 a29e1e50fd583b572983cc2a510ecd6c 384 Gene3D G3DSA:3.55.50.10 121 239 4.2E-6 T 29-03-2018 AM460_RS21210 a29e1e50fd583b572983cc2a510ecd6c 384 SUPERFAMILY SSF69279 34 196 9.07E-23 T 29-03-2018 AM460_RS21210 a29e1e50fd583b572983cc2a510ecd6c 384 Pfam PF05954 Phage late control gene D protein (GPD) 127 341 4.1E-11 T 29-03-2018 AM460_RS19775 1ea1a18008cba4f9bd693c0a11e48cf7 347 Pfam PF07859 alpha/beta hydrolase fold 88 309 2.7E-23 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM460_RS19775 1ea1a18008cba4f9bd693c0a11e48cf7 347 Gene3D G3DSA:3.40.50.1820 29 336 5.9E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS19775 1ea1a18008cba4f9bd693c0a11e48cf7 347 SUPERFAMILY SSF53474 66 330 1.97E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM460_RS23160 0754593e315c348cebd3f7d40cdf821f 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 8.4E-53 T 29-03-2018 IPR009912 Zinc-ribbon containing domain AM460_RS10870 74004031f1307930979c5181cd39f532 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 2.1E-14 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AM460_RS27150 e534181e1f124cfa029841313f958ccd 144 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 5 142 1.2E-52 T 29-03-2018 IPR009385 Plasmid SOS inhibition AM460_RS01945 cc0fe12bf30642df7d3d635784fe57c9 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 45.336 T 29-03-2018 IPR022894 Oligoribonuclease GO:0000175 AM460_RS01945 cc0fe12bf30642df7d3d635784fe57c9 181 Pfam PF00929 Exonuclease 9 170 2.2E-37 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS01945 cc0fe12bf30642df7d3d635784fe57c9 181 SUPERFAMILY SSF53098 3 180 3.89E-49 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS01945 cc0fe12bf30642df7d3d635784fe57c9 181 SMART SM00479 7 180 1.2E-21 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM460_RS01945 cc0fe12bf30642df7d3d635784fe57c9 181 Gene3D G3DSA:3.30.420.10 2 181 2.3E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM460_RS17145 97702728f4da2df50f293184dfa82d9f 284 Gene3D G3DSA:1.20.1630.10 2 282 1.4E-43 T 29-03-2018 AM460_RS17145 97702728f4da2df50f293184dfa82d9f 284 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 274 1.2E-114 T 29-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM460_RS18485 3410a379c1c8e4c473028c27dc268f46 113 Pfam PF05939 Phage minor tail protein 6 112 3.6E-27 T 29-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail AM460_RS02020 812912794cc80a1be6472a871e11a1e4 41 Pfam PF08085 Entericidin EcnA/B family 20 40 1.8E-7 T 29-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AM460_RS08980 69725cca5f238a32762f1b14de829524 45 Pfam PF13006 Insertion element 4 transposase N-terminal 11 45 3.1E-6 T 29-03-2018 IPR024473 Transposase, IS4, N-terminal AM460_RS26500 8c32c03863424566738c3bb1020437ac 218 Pfam PF01478 Type IV leader peptidase family 79 174 4.9E-5 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AM460_RS11135 749ab00c4909f333cf0f172c92eac7e0 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 1.0E-50 T 29-03-2018 IPR007054 Lysis protein S GO:0019835 AM460_RS11135 749ab00c4909f333cf0f172c92eac7e0 71 PIRSF PIRSF030786 1 71 3.8E-46 T 29-03-2018 IPR007054 Lysis protein S GO:0019835 AM460_RS08255 ea5d554fec55cf2532f7b85cb5210dce 119 Pfam PF04380 Membrane fusogenic activity 21 98 1.5E-28 T 29-03-2018 IPR007475 Membrane fusogenic activity AM460_RS25790 8de25dc58072f4732686d3569d7f48a2 79 SUPERFAMILY SSF54060 1 64 5.59E-12 T 29-03-2018 AM460_RS25790 8de25dc58072f4732686d3569d7f48a2 79 Gene3D G3DSA:3.90.540.10 1 67 9.5E-12 T 29-03-2018 AM460_RS07250 117d247c168403a4f9eab06697202f21 1266 Pfam PF13502 AsmA-like C-terminal region 1009 1252 3.0E-66 T 29-03-2018 IPR032712 AsmA-like, C-terminal AM460_RS07250 117d247c168403a4f9eab06697202f21 1266 Pfam PF13116 Protein of unknown function 505 789 1.1E-96 T 29-03-2018 IPR025263 Domain of unknown function DUF3971 AM460_RS07250 117d247c168403a4f9eab06697202f21 1266 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1262 0.0 T 29-03-2018 IPR011836 Conserved hypothetical protein CHP02099 AM460_RS04790 9655569195d0ffd48eeb088ee0ba899e 571 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 160 185 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM460_RS04790 9655569195d0ffd48eeb088ee0ba899e 571 Pfam PF00474 Sodium:solute symporter family 35 442 1.1E-50 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS04790 9655569195d0ffd48eeb088ee0ba899e 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 443 8.8E-125 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS10510 ed8c3c8822b99245f1fc16f04fafc15f 107 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 1.8E-47 T 29-03-2018 IPR022721 Protein of unknown function DUF3561 AM460_RS10510 ed8c3c8822b99245f1fc16f04fafc15f 107 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 6 107 3.0E-52 T 29-03-2018 IPR022721 Protein of unknown function DUF3561 AM460_RS21300 7db2d6b30baccf5a59d44830fbf845a0 159 Pfam PF06995 Phage P2 GpU 6 125 1.2E-44 T 29-03-2018 IPR009734 Myoviridae, GpU AM460_RS21300 7db2d6b30baccf5a59d44830fbf845a0 159 PIRSF PIRSF029208 1 154 1.9E-63 T 29-03-2018 IPR016912 Bacteriophage P2, GpU AM460_RS08060 099c26405ddc3eaaa3280e45e949c8a7 477 PIRSF PIRSF006060 1 476 3.7E-54 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS08060 099c26405ddc3eaaa3280e45e949c8a7 477 Pfam PF13520 Amino acid permease 11 439 1.5E-30 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS27535 9a37d194a94e5b75a960bf85ba41caed 291 Pfam PF06067 Domain of unknown function (DUF932) 54 280 3.3E-56 T 29-03-2018 IPR026325 Protein of unknown function DUF932 AM460_RS05445 61374125e3236f1025c16cc85379f696 145 Pfam PF05360 yiaA/B two helix domain 12 64 4.2E-21 T 29-03-2018 IPR008024 YiaAB two helix AM460_RS05445 61374125e3236f1025c16cc85379f696 145 Pfam PF05360 yiaA/B two helix domain 75 127 2.4E-19 T 29-03-2018 IPR008024 YiaAB two helix AM460_RS02840 fbb6498f0e2700d373910bd08ba7709a 92 Pfam PF17089 Uncharacterised protein family 1 92 1.0E-65 T 29-03-2018 IPR031382 Uncharacterised protein YjbT AM460_RS17855 1ff566c450dce3bddc4bede3bcd78349 140 Pfam PF03724 META domain 28 131 3.6E-23 T 29-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AM460_RS05260 3b71aebc857797f6b97324e944b78985 69 Gene3D G3DSA:1.20.970.20 14 63 2.9E-16 T 29-03-2018 AM460_RS19600 9dca34dd2f05324e410e4e009b88f38b 213 Pfam PF06805 Bacteriophage lambda tail assembly protein I 14 97 3.0E-29 T 29-03-2018 IPR010654 Bacteriophage lambda tail assembly I AM460_RS28110 031e6feb76a72d555f1d146b72605811 128 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 20 124 1.1E-39 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI AM460_RS28110 031e6feb76a72d555f1d146b72605811 128 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 14 125 9.6E-57 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI AM460_RS27015 031e6feb76a72d555f1d146b72605811 128 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 20 124 1.1E-39 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI AM460_RS27015 031e6feb76a72d555f1d146b72605811 128 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 14 125 9.6E-57 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI AM460_RS00905 6ceea571b6308d455ec3e91e2da74fc0 238 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 22 236 8.1E-29 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin AM460_RS00905 6ceea571b6308d455ec3e91e2da74fc0 238 Gene3D G3DSA:2.40.160.40 25 238 2.3E-31 T 29-03-2018 AM460_RS15020 2e5fb87c8be88e819af54edd7a6c1b15 401 Pfam PF04143 Sulphur transport 3 160 4.2E-26 T 29-03-2018 IPR007272 Sulphur transport domain AM460_RS15020 2e5fb87c8be88e819af54edd7a6c1b15 401 Pfam PF04143 Sulphur transport 237 392 2.9E-24 T 29-03-2018 IPR007272 Sulphur transport domain AM460_RS02255 6da51f605a6d8b0aed027998b72f6c2f 445 PIRSF PIRSF006060 1 435 1.2E-61 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS02255 6da51f605a6d8b0aed027998b72f6c2f 445 Pfam PF13520 Amino acid permease 12 403 6.1E-50 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM460_RS21720 c6a89eea1ea0cec537373b1920a5fe9c 211 Pfam PF05069 Phage virion morphogenesis family 6 63 1.6E-10 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS21720 c6a89eea1ea0cec537373b1920a5fe9c 211 Pfam PF05069 Phage virion morphogenesis family 121 203 6.0E-15 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS21720 c6a89eea1ea0cec537373b1920a5fe9c 211 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 129 202 1.5E-10 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM460_RS04275 aa3cea93b80b2669d0a7587ee31acb21 367 Pfam PF00953 Glycosyl transferase family 4 76 232 2.2E-27 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM460_RS04275 aa3cea93b80b2669d0a7587ee31acb21 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.196 T 29-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AM460_RS04275 aa3cea93b80b2669d0a7587ee31acb21 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 1.0E-173 T 29-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AM460_RS26885 403618ff90359ff1f7aeb831083aa33d 323 Gene3D G3DSA:1.10.3530.10 46 222 1.8E-77 T 29-03-2018 IPR023136 Api92-like domain AM460_RS26885 403618ff90359ff1f7aeb831083aa33d 323 Pfam PF06924 Protein of unknown function (DUF1281) 26 155 9.8E-33 T 29-03-2018 IPR009694 Protein of unknown function DUF1281 AM460_RS26885 403618ff90359ff1f7aeb831083aa33d 323 SUPERFAMILY SSF160940 18 297 1.24E-119 T 29-03-2018 AM460_RS28100 e8f7229fe21e04559b77942d6677efb0 330 Pfam PF06834 TraU protein 28 329 2.1E-115 T 29-03-2018 IPR009649 TraU AM460_RS02285 25433685cdfe6ddd95ab2df22c24e3cb 292 Pfam PF13990 YjcZ-like protein 21 287 2.9E-135 T 29-03-2018 IPR025599 YjcZ-like protein AM460_RS22665 9e441c32db8af40efbbc54336b0dd9dc 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 4.5E-15 T 29-03-2018 IPR012994 Membrane bound YbgT-like AM460_RS22665 9e441c32db8af40efbbc54336b0dd9dc 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.4E-20 T 29-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AM460_RS16360 176860dc1e15267a7b6a14d9eb7a9ac8 87 Hamap MF_01580 Cell division activator CedA [cedA]. 8 87 37.647 T 29-03-2018 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 AM460_RS16360 176860dc1e15267a7b6a14d9eb7a9ac8 87 Pfam PF10729 Cell division activator CedA 10 85 1.6E-45 T 29-03-2018 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 AM460_RS18575 7e232250d24e6c37dbe355459d0f2a06 164 Pfam PF03245 Bacteriophage Rz lysis protein 30 153 7.4E-48 T 29-03-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 AM460_RS10890 e896edf8907270a739f561109aa1fb14 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 324 6.3E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS10890 e896edf8907270a739f561109aa1fb14 354 SUPERFAMILY SSF161098 142 324 6.93E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM460_RS10890 e896edf8907270a739f561109aa1fb14 354 Gene3D G3DSA:1.10.3720.10 100 336 9.5E-36 T 29-03-2018 AM460_RS21145 f6813c04f7262cb7d8d5e7d65d84ccb7 317 Gene3D G3DSA:3.90.1690.10 2 317 1.1E-55 T 29-03-2018 AM460_RS00335 f6813c04f7262cb7d8d5e7d65d84ccb7 317 Gene3D G3DSA:3.90.1690.10 2 317 1.1E-55 T 29-03-2018 AM460_RS23145 0195da3af211955acf298bd0ccbe3578 235 Pfam PF06889 Protein of unknown function (DUF1266) 41 216 4.5E-38 T 29-03-2018 IPR009677 Protein of unknown function DUF1266 AM460_RS22850 90cf55ba974ffb05900546f5517665f9 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 1.0E-34 T 29-03-2018 IPR019663 Uncharacterised protein YbfA AM460_RS00700 4cc064c31617a605cca0d7d6a285aea3 54 Pfam PF06568 Domain of unknown function (DUF1127) 18 54 1.5E-13 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 AM460_RS01490 f11f0a0cd138fc93b923468f234e4779 17 Pfam PF17059 MgtA leader peptide 1 17 6.0E-11 T 29-03-2018 IPR031434 MgtA leader peptide AM460_RS05820 46ccc8677925febbf9a460fd4419d41d 330 SUPERFAMILY SSF53807 76 330 5.1E-58 T 29-03-2018 AM460_RS05820 46ccc8677925febbf9a460fd4419d41d 330 Pfam PF01497 Periplasmic binding protein 79 307 1.1E-31 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM460_RS05820 46ccc8677925febbf9a460fd4419d41d 330 Gene3D G3DSA:3.40.50.1980 183 330 3.1E-32 T 29-03-2018 AM460_RS05820 46ccc8677925febbf9a460fd4419d41d 330 Gene3D G3DSA:3.40.50.1980 75 182 1.7E-29 T 29-03-2018 AM460_RS14665 ac15e9022b9a93f777df7d5f10a3b4e6 350 SUPERFAMILY SSF53756 30 349 1.26E-33 T 29-03-2018 AM460_RS14665 ac15e9022b9a93f777df7d5f10a3b4e6 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 232 320 5.4E-7 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM460_RS14665 ac15e9022b9a93f777df7d5f10a3b4e6 350 Gene3D G3DSA:3.40.50.2000 194 350 1.6E-17 T 29-03-2018 AM460_RS16850 e3384b3d27ef2cef6db9e0a4b0ac2877 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 70 3.7E-14 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AM460_RS23690 fd1019aeb59aa626d15025f4b82b2f83 173 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 167 3.5E-32 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AM460_RS27825 1167129a794677e510c947b51dfedcd3 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.4E-38 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS22515 388b7440f751b01deb0d56ef744bb678 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 3.0E-29 T 29-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM460_RS22515 388b7440f751b01deb0d56ef744bb678 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.084 T 29-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM460_RS01710 ab35b820ca0827f27f7346453ae5055f 168 Pfam PF13657 HipA N-terminal domain 18 94 1.0E-4 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AM460_RS14990 b3c18e5eabe7fd5f9929abc33ac16dd1 161 SUPERFAMILY SSF143081 17 143 1.11E-36 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM460_RS14990 b3c18e5eabe7fd5f9929abc33ac16dd1 161 Pfam PF02586 SOS response associated peptidase (SRAP) 27 132 7.1E-27 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM460_RS14990 b3c18e5eabe7fd5f9929abc33ac16dd1 161 Gene3D G3DSA:3.90.1680.10 5 147 9.4E-32 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM460_RS05775 b06069eed9d51d080555c57448ff8e0a 190 Pfam PF03729 Short repeat of unknown function (DUF308) 84 153 5.1E-8 T 29-03-2018 IPR005325 Protein of unknown function DUF308, membrane AM460_RS05775 b06069eed9d51d080555c57448ff8e0a 190 Pfam PF03729 Short repeat of unknown function (DUF308) 27 97 5.8E-12 T 29-03-2018 IPR005325 Protein of unknown function DUF308, membrane AM460_RS05630 77e673648253e578993b884895bff75a 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 2.0E-22 T 29-03-2018 IPR024487 Cellulose biosynthesis protein BcsR AM460_RS05630 77e673648253e578993b884895bff75a 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 62 2.0E-29 T 29-03-2018 IPR024487 Cellulose biosynthesis protein BcsR AM460_RS07575 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM460_RS07575 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM460_RS07575 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM460_RS07575 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM460_RS07575 c9d64c9174aefb2a599ee9a9f81fde03 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 2.3E-21 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM460_RS07575 c9d64c9174aefb2a599ee9a9f81fde03 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 1.4E-26 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM460_RS19745 2d7c34f7750541ff6582395b000e6e4c 46 ProDom PD026569 PROPHAGE GIFSY-1 3'REGION ORF45 C1558 RUSA LAMBDOID YLCG DLP12 2 44 3.0E-8 T 29-03-2018 AM460_RS26725 2e0fad0e2a811bb4d6df73e0d4e1d39c 899 Pfam PF03432 Relaxase/Mobilisation nuclease domain 62 314 1.3E-64 T 29-03-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 AM460_RS20980 fea898379c020a37b8ea2247fec9d276 129 SUPERFAMILY SSF46689 12 107 8.51E-27 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS20980 fea898379c020a37b8ea2247fec9d276 129 Pfam PF08765 Mor transcription activator family 9 116 1.3E-43 T 29-03-2018 IPR014875 Mor transcription activator AM460_RS20980 fea898379c020a37b8ea2247fec9d276 129 Gene3D G3DSA:1.10.10.60 62 116 6.5E-19 T 29-03-2018 AM460_RS15270 8aeb1a49fdb8bb7b6c2a6070c2e90a28 198 Pfam PF07105 Protein of unknown function (DUF1367) 1 196 2.9E-77 T 29-03-2018 IPR009797 Protein of unknown function DUF1367 AM460_RS07280 1062621ed99d416d9d264916ad240b05 90 SUPERFAMILY SSF52038 1 89 2.75E-30 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM460_RS07280 1062621ed99d416d9d264916ad240b05 90 Gene3D G3DSA:3.30.370.10 1 90 1.4E-19 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM460_RS07280 1062621ed99d416d9d264916ad240b05 90 Pfam PF01337 Barstar (barnase inhibitor) 5 79 5.4E-5 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM460_RS25015 193ebb010e7d2aaea83402b3fd2b49ea 306 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 14 223 1.1E-36 T 29-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AM460_RS02850 2fed49003cbf4a3e58d022c8bdb7c19e 245 Pfam PF06251 Capsule biosynthesis GfcC 19 245 1.6E-89 T 29-03-2018 IPR010425 Domain of unknown function DUF1017 AM460_RS13075 3926941b125dc477463ad67192abbf6a 180 Gene3D G3DSA:2.40.160.10 4 180 4.6E-12 T 29-03-2018 AM460_RS13075 3926941b125dc477463ad67192abbf6a 180 Pfam PF07437 YfaZ precursor 1 180 6.4E-89 T 29-03-2018 IPR009998 YfaZ AM460_RS13075 3926941b125dc477463ad67192abbf6a 180 SUPERFAMILY SSF56925 56 177 3.61E-9 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM460_RS27075 c3da6337cfd3063cc8b38b6a37b7b996 242 Pfam PF06586 TraK protein 14 234 8.4E-45 T 29-03-2018 IPR010563 Pilus assembly TraK AM460_RS27075 c3da6337cfd3063cc8b38b6a37b7b996 242 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 13 237 4.6E-74 T 29-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK AM460_RS08425 4d4ac49da1a84306769685913185a1fd 160 SMART SM00871 6 160 1.0E-30 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AM460_RS08425 4d4ac49da1a84306769685913185a1fd 160 SUPERFAMILY SSF55136 7 159 8.72E-32 T 29-03-2018 AM460_RS08425 4d4ac49da1a84306769685913185a1fd 160 Pfam PF06445 GyrI-like small molecule binding domain 7 159 2.9E-30 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain AM460_RS08425 4d4ac49da1a84306769685913185a1fd 160 Gene3D G3DSA:3.20.80.10 2 159 3.0E-25 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AM460_RS08285 ace7e4c2f995253436b746eb290d1661 56 Pfam PF13260 Protein of unknown function (DUF4051) 1 50 4.1E-25 T 29-03-2018 IPR025125 Protein of unknown function DUF4051 AM460_RS18745 50ae818db68856e7ce7e97333bbfc7d5 63 Pfam PF07358 Protein of unknown function (DUF1482) 4 61 1.8E-24 T 29-03-2018 IPR009954 Protein of unknown function DUF1482 AM460_RS08580 cd9f5956f94fc8cb7105b18e978d56f7 392 Pfam PF03916 Polysulphide reductase, NrfD 45 330 1.8E-18 T 29-03-2018 IPR005614 NrfD family AM460_RS08580 cd9f5956f94fc8cb7105b18e978d56f7 392 Gene3D G3DSA:1.20.1630.10 41 337 1.6E-40 T 29-03-2018 AM460_RS22935 a341c114d295970881c5f8bd92756313 108 Pfam PF13982 YbfN-like lipoprotein 20 107 9.8E-49 T 29-03-2018 IPR025727 YbfN-like lipoprotein AM460_RS27115 33174a5779c063360d3d8fd6def595d1 283 Pfam PF06067 Domain of unknown function (DUF932) 46 272 7.0E-57 T 29-03-2018 IPR026325 Protein of unknown function DUF932 AM460_RS17515 4f56ef81d6622cc1f5000ca16467b31d 94 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 1.3E-27 T 29-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 AM460_RS17515 4f56ef81d6622cc1f5000ca16467b31d 94 SUPERFAMILY SSF47413 9 88 7.04E-24 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM460_RS17515 4f56ef81d6622cc1f5000ca16467b31d 94 Pfam PF01381 Helix-turn-helix 14 65 2.3E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS17515 4f56ef81d6622cc1f5000ca16467b31d 94 Gene3D G3DSA:1.10.260.40 1 82 1.9E-12 T 29-03-2018 AM460_RS17515 4f56ef81d6622cc1f5000ca16467b31d 94 SMART SM00530 12 67 6.6E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM460_RS23140 7c01fdc27eaab394b88959b0ffb45865 483 Gene3D G3DSA:1.10.287.110 1 257 5.5E-5 T 29-03-2018 IPR001623 DnaJ domain AM460_RS23140 7c01fdc27eaab394b88959b0ffb45865 483 SUPERFAMILY SSF46565 2 47 9.94E-5 T 29-03-2018 IPR001623 DnaJ domain AM460_RS03390 70f08df6e8e8bcdf8d000464ddbd5cd3 202 Gene3D G3DSA:3.90.1720.10 17 202 9.3E-48 T 29-03-2018 AM460_RS03390 70f08df6e8e8bcdf8d000464ddbd5cd3 202 SUPERFAMILY SSF54001 19 195 1.04E-49 T 29-03-2018 AM460_RS03390 70f08df6e8e8bcdf8d000464ddbd5cd3 202 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 21 193 2.4E-51 T 29-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM460_RS10085 5b3e67457b50932c227a1e9ad4b2bd4d 536 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 226 489 1.0E-85 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 AM460_RS10085 5b3e67457b50932c227a1e9ad4b2bd4d 536 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 490 8.4E-142 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 AM460_RS10085 5b3e67457b50932c227a1e9ad4b2bd4d 536 Pfam PF06812 ImpA, N-terminal, type VI secretion system 34 138 4.5E-18 T 29-03-2018 IPR010657 ImpA, N-terminal AM460_RS27095 472c8af466bf5f84e569ae065fb024c6 131 Pfam PF05509 TraY domain 70 117 2.4E-21 T 29-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 AM460_RS27095 472c8af466bf5f84e569ae065fb024c6 131 Pfam PF05509 TraY domain 15 58 2.9E-14 T 29-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 AM460_RS27020 1b86705af129d9c2370e2a638ddc5d51 876 SUPERFAMILY SSF52540 441 763 2.25E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS27020 1b86705af129d9c2370e2a638ddc5d51 876 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 44 854 3.4E-290 T 29-03-2018 IPR014117 Type-IV secretion system protein TraC AM460_RS27020 1b86705af129d9c2370e2a638ddc5d51 876 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 39 277 4.5E-46 T 29-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM460_RS27020 1b86705af129d9c2370e2a638ddc5d51 876 Gene3D G3DSA:3.40.50.300 318 789 8.1E-18 T 29-03-2018 AM460_RS27020 1b86705af129d9c2370e2a638ddc5d51 876 Pfam PF01935 Domain of unknown function DUF87 483 669 4.9E-5 T 29-03-2018 IPR002789 Helicase HerA, central domain AM460_RS12990 00926371a557641dc94145ad2fafee4b 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 1.4E-30 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM460_RS24710 e92d964b4a8f08d6e907ec0a3b052713 287 Pfam PF11392 Protein of unknown function (DUF2877) 167 274 1.3E-26 T 29-03-2018 IPR021530 Protein of unknown function DUF2877 AM460_RS09765 fa857e189c3f4836b58afabb17b10182 455 Pfam PF00860 Permease family 32 415 2.3E-79 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS17785 88fb4b8cd00069f7fe5c29bacf5b457b 176 SUPERFAMILY SSF81342 4 172 7.14E-28 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM460_RS17785 88fb4b8cd00069f7fe5c29bacf5b457b 176 Gene3D G3DSA:1.20.950.20 2 176 1.1E-27 T 29-03-2018 AM460_RS17785 88fb4b8cd00069f7fe5c29bacf5b457b 176 Pfam PF01292 Prokaryotic cytochrome b561 4 172 1.5E-21 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM460_RS04135 dc343b156af7733f266206c0e34d4d10 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 6.5E-9 T 29-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site AM460_RS14000 4ebb5f471b63e2f150a38e4f9c36e42f 18 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 18 6.0E-10 T 29-03-2018 IPR025881 Toxin Ibs AM460_RS18645 897e665e5f7d0a4e28a21f9f454619fe 65 SUPERFAMILY SSF46785 1 57 9.56E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18645 897e665e5f7d0a4e28a21f9f454619fe 65 Gene3D G3DSA:1.10.10.10 1 62 1.3E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS08770 66e2d393703bcc42d5d10d38b21d9812 400 Pfam PF05159 Capsule polysaccharide biosynthesis protein 83 389 5.5E-90 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 AM460_RS08770 66e2d393703bcc42d5d10d38b21d9812 400 Gene3D G3DSA:3.40.50.2000 222 346 7.6E-4 T 29-03-2018 AM460_RS16690 7c693c2aa686710c6f432823818f3e1a 261 Pfam PF01292 Prokaryotic cytochrome b561 69 257 1.6E-28 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM460_RS16690 7c693c2aa686710c6f432823818f3e1a 261 Gene3D G3DSA:1.20.950.20 60 261 3.7E-34 T 29-03-2018 AM460_RS16690 7c693c2aa686710c6f432823818f3e1a 261 SUPERFAMILY SSF81342 63 259 2.12E-25 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM460_RS06405 688420a7f588eef90a00db170c6a9335 574 Pfam PF13687 Domain of unknown function (DUF4153) 150 389 6.3E-45 T 29-03-2018 IPR025291 Protein of unknown function DUF4153 AM460_RS15135 01ee8bc3a0b18fa0a5ed51cf383c4a29 87 Pfam PF13986 Domain of unknown function (DUF4224) 7 51 2.0E-16 T 29-03-2018 IPR025319 Domain of unknown function DUF4224 AM460_RS09165 ecac2fc8b9092521d17f8704e9558d94 595 Pfam PF04183 IucA / IucC family 157 386 1.7E-47 T 29-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AM460_RS09165 ecac2fc8b9092521d17f8704e9558d94 595 Pfam PF06276 Ferric iron reductase FhuF-like transporter 419 575 6.2E-29 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain AM460_RS20000 73b02d4ad99a424c0b72a434a130c16e 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 1.6E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS20000 73b02d4ad99a424c0b72a434a130c16e 85 SUPERFAMILY SSF159871 3 85 2.62E-24 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 AM460_RS20000 73b02d4ad99a424c0b72a434a130c16e 85 Gene3D G3DSA:3.30.1660.10 21 85 2.1E-21 T 29-03-2018 IPR025543 Dodecin-like AM460_RS27070 bea672c7a9986cddb81d9b43aab574d6 483 Pfam PF03743 Bacterial conjugation TrbI-like protein 213 409 1.0E-30 T 29-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM460_RS22380 5ec0e541086a11b0ae0c659a679198c4 318 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 1.9E-16 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AM460_RS15465 96c5f61e193689d16bb38315cf420562 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 2.3E-48 T 29-03-2018 IPR020262 Uncharacterised protein family YecJ AM460_RS15465 96c5f61e193689d16bb38315cf420562 83 ProDom PD060536 YECJ YPO1738 1 77 1.0E-37 T 29-03-2018 IPR020262 Uncharacterised protein family YecJ AM460_RS13820 819bdf5d8e4c4421a139dc25920dfb59 93 Pfam PF10836 Protein of unknown function (DUF2574) 1 93 1.4E-51 T 29-03-2018 IPR020386 Uncharacterised protein family YehE AM460_RS13820 819bdf5d8e4c4421a139dc25920dfb59 93 ProDom PD064930 YEHE MEMBRANE OUTER STY2382 PRECURSOR ECS2918 SIGNAL 1 83 2.0E-44 T 29-03-2018 IPR020386 Uncharacterised protein family YehE AM460_RS13135 6dc25f6c99fa38468286669e0eb4daca 358 SUPERFAMILY SSF51695 32 356 7.06E-95 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM460_RS13135 6dc25f6c99fa38468286669e0eb4daca 358 Gene3D G3DSA:3.20.20.190 29 356 1.5E-65 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM460_RS13135 6dc25f6c99fa38468286669e0eb4daca 358 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 350 1.0E-78 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM460_RS17350 86a4a9472da27f683b25cb575addbde0 304 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 280 2.7E-56 T 29-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 AM460_RS16205 a4f2835ffa56d9592c74e5bc16b81292 90 Pfam PF07383 Protein of unknown function (DUF1496) 34 89 3.1E-24 T 29-03-2018 IPR009971 Protein of unknown function DUF1496 AM460_RS11900 5e2777069dc3cfa1cc66e785831ad0dd 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 63 2.0E-29 T 29-03-2018 IPR022576 Protein of unknown function DUF2633 AM460_RS11900 5e2777069dc3cfa1cc66e785831ad0dd 63 Pfam PF11119 Protein of unknown function (DUF2633) 9 62 1.1E-30 T 29-03-2018 IPR022576 Protein of unknown function DUF2633 AM460_RS27090 8d08ebdd744b7d0767820a822c4ac346 119 Pfam PF05513 TraA 1 117 2.0E-56 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 AM460_RS27090 8d08ebdd744b7d0767820a822c4ac346 119 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 23 119 9.6E-38 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 AM460_RS19510 48ab9db8b5960d4236b69b65cd655cde 78 Pfam PF10798 Biofilm development protein YmgB/AriR 27 63 3.5E-5 T 29-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 AM460_RS19510 48ab9db8b5960d4236b69b65cd655cde 78 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 25 76 0.006 T 29-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 AM460_RS17825 447153696cc2a3094919df08379583a3 63 Gene3D G3DSA:2.160.10.10 1 63 2.6E-11 T 29-03-2018 AM460_RS17825 447153696cc2a3094919df08379583a3 63 SUPERFAMILY SSF51161 1 62 5.13E-13 T 29-03-2018 IPR011004 Trimeric LpxA-like AM460_RS01150 8091a184ba37ae9ab3a2d2cfc4972bb0 317 Pfam PF04773 FecR protein 110 202 3.2E-16 T 29-03-2018 IPR006860 FecR protein AM460_RS01150 8091a184ba37ae9ab3a2d2cfc4972bb0 317 Pfam PF16344 Domain of unknown function (DUF4974) 219 305 1.9E-7 T 29-03-2018 IPR032508 Protein FecR, C-terminal AM460_RS01150 8091a184ba37ae9ab3a2d2cfc4972bb0 317 Pfam PF16220 Domain of unknown function (DUF4880) 15 56 5.3E-9 T 29-03-2018 IPR032623 FecR, N-terminal AM460_RS01150 8091a184ba37ae9ab3a2d2cfc4972bb0 317 PIRSF PIRSF018266 4 317 6.4E-88 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM460_RS22775 f39b853be3e6f37ed0929722de1021ad 398 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 2 383 2.5E-110 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AM460_RS12105 0258db62944cfdf2ec2a4525305a48dc 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.4E-29 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM460_RS12105 0258db62944cfdf2ec2a4525305a48dc 95 Gene3D G3DSA:2.40.50.220 2 95 6.6E-33 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM460_RS12105 0258db62944cfdf2ec2a4525305a48dc 95 SUPERFAMILY SSF159133 1 94 1.44E-30 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM460_RS12105 0258db62944cfdf2ec2a4525305a48dc 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 7.0E-37 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM460_RS08970 4149cd8db0dfe49f1c221db58f919250 141 Pfam PF01527 Transposase 11 65 1.1E-14 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM460_RS08970 4149cd8db0dfe49f1c221db58f919250 141 SUPERFAMILY SSF46689 10 62 1.13E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM460_RS08970 4149cd8db0dfe49f1c221db58f919250 141 Gene3D G3DSA:1.10.10.10 1 70 2.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS01365 aec6787580bbe11ce3ab3b06fc0a1c8c 196 Pfam PF13356 Arm DNA-binding domain 3 86 3.2E-20 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM460_RS01365 aec6787580bbe11ce3ab3b06fc0a1c8c 196 Gene3D G3DSA:1.10.150.130 86 196 5.8E-7 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM460_RS26965 658639e662ff302e956d1dd6f8a1e3d7 196 Gene3D G3DSA:1.10.10.10 1 94 7.7E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM460_RS18845 e386a8a3a33c0602477b38a52c658ca7 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 5.6E-86 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM460_RS18845 e386a8a3a33c0602477b38a52c658ca7 215 Pfam PF01914 MarC family integral membrane protein 9 210 3.8E-76 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM460_RS05515 02340643b88ac0073adc845451d06c7e 187 SUPERFAMILY SSF48150 2 184 6.48E-84 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM460_RS05515 02340643b88ac0073adc845451d06c7e 187 Gene3D G3DSA:1.10.340.30 1 182 4.7E-86 T 29-03-2018 AM460_RS05515 02340643b88ac0073adc845451d06c7e 187 Pfam PF03352 Methyladenine glycosylase 6 181 1.5E-82 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AM460_RS05515 02340643b88ac0073adc845451d06c7e 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 3.4E-97 T 29-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AM460_RS10035 f0c3764009fabb6ce76bbd5130d4c648 198 SUPERFAMILY SSF53697 7 195 6.68E-45 T 29-03-2018 AM460_RS10035 f0c3764009fabb6ce76bbd5130d4c648 198 Pfam PF01380 SIS domain 41 170 1.5E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM460_RS10035 f0c3764009fabb6ce76bbd5130d4c648 198 Gene3D G3DSA:3.40.50.10490 1 198 4.1E-49 T 29-03-2018 AM460_RS12900 abb4b6a86bef04ba68715671b2093714 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.913 T 29-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AM460_RS12900 abb4b6a86bef04ba68715671b2093714 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 6.3E-31 T 29-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS16035 f17bc1c5b7afd9c5316597d6e8e9b45d 115 Pfam PF04343 Protein of unknown function, DUF488 5 112 6.4E-32 T 29-03-2018 IPR007438 Protein of unknown function DUF488 AM460_RS10120 563a94bc751d78cb09190149373af268 200 SUPERFAMILY SSF53955 64 166 6.19E-7 T 29-03-2018 IPR023346 Lysozyme-like domain AM460_RS10120 563a94bc751d78cb09190149373af268 200 Pfam PF01464 Transglycosylase SLT domain 68 166 3.3E-5 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM460_RS10120 563a94bc751d78cb09190149373af268 200 Gene3D G3DSA:1.10.530.10 1 190 5.2E-13 T 29-03-2018 AM460_RS03475 d244eb03d45cd5bb160b0d6de8cca75d 199 Pfam PF07305 Protein of unknown function (DUF1454) 9 192 4.3E-86 T 29-03-2018 IPR009918 Protein of unknown function DUF1454 AM460_RS08805 94fb6809f58562eda0212533f081505a 246 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 34 231 3.0E-29 T 29-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AM460_RS21795 04dc2064dfe712439890cebab20b3b6a 170 Pfam PF04985 Phage tail tube protein FII 4 168 7.1E-49 T 29-03-2018 IPR006498 Tail tube protein AM460_RS21795 04dc2064dfe712439890cebab20b3b6a 170 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 169 1.5E-34 T 29-03-2018 IPR006498 Tail tube protein AM460_RS13490 dec985e5a1518aa346f21e460276cc28 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 1.9E-6 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM460_RS26995 ee78b7dc30b731481a798a10a999e004 216 Gene3D G3DSA:3.40.30.10 42 196 8.1E-4 T 29-03-2018 AM460_RS26995 ee78b7dc30b731481a798a10a999e004 216 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 97 209 5.0E-37 T 29-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup AM460_RS26995 ee78b7dc30b731481a798a10a999e004 216 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 98 175 9.0E-20 T 29-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AM460_RS21425 fe880874d1e0f9d8a9b2c16fd58c9514 169 Pfam PF05926 Phage head completion protein (GPL) 31 169 9.4E-52 T 29-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AM460_RS07960 06d0c04686cf093876a7be5f2128f8f0 122 Pfam PF06476 Protein of unknown function (DUF1090) 10 116 2.2E-36 T 29-03-2018 IPR009468 Protein of unknown function DUF1090 AM460_RS15445 81b5dc60a40f17ff8d057986760c72c8 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 3.4E-36 T 29-03-2018 IPR019620 Putative metal-binding protein AM460_RS15445 81b5dc60a40f17ff8d057986760c72c8 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 9.0E-36 T 29-03-2018 IPR019620 Putative metal-binding protein AM460_RS15220 0e6d96a36dedc482280653eeda1a3372 262 Pfam PF10543 ORF6N domain 15 96 7.8E-18 T 29-03-2018 IPR018873 KilA-N, DNA-binding domain AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 29-03-2018 IPR018080 Band 7/stomatin-like, conserved site AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 SUPERFAMILY SSF117892 49 183 2.75E-41 T 29-03-2018 IPR001107 Band 7 domain AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 Pfam PF01145 SPFH domain / Band 7 family 22 202 7.1E-34 T 29-03-2018 IPR001107 Band 7 domain AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 171 192 3.4E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 73 94 3.4E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 128 151 3.4E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 108 125 3.4E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 152 170 3.4E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 Pfam PF16200 C-terminal region of band_7 238 297 4.1E-7 T 29-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 AM460_RS23875 8e611a4de452fc9d06b5ec86cf4671fc 305 SMART SM00244 18 176 6.3E-60 T 29-03-2018 IPR001107 Band 7 domain AM460_RS22770 a79985d66e9bd25f023d9c87fb5632c4 322 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 306 2.9E-66 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM460_RS22770 a79985d66e9bd25f023d9c87fb5632c4 322 Gene3D G3DSA:3.40.190.10 149 232 6.7E-6 T 29-03-2018 AM460_RS22770 a79985d66e9bd25f023d9c87fb5632c4 322 SUPERFAMILY SSF53850 128 222 1.09E-6 T 29-03-2018 AM460_RS17860 b2074c2ff5be6c80052b63e75c031300 88 Pfam PF03891 Domain of unknown function (DUF333) 38 83 3.1E-15 T 29-03-2018 IPR005590 Protein of unknown function DUF333 AM460_RS07965 c35569e8f23a67f5c55632336801054c 127 Pfam PF13721 SecD export protein N-terminal TM region 17 104 3.2E-17 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain AM460_RS07965 c35569e8f23a67f5c55632336801054c 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 29.371 T 29-03-2018 IPR026574 Modulator protein MzrA AM460_RS08940 8e69af7619cfdb35ba6bd1491c0ae2eb 201 Pfam PF11726 Inovirus Gp2 24 199 1.2E-53 T 29-03-2018 AM460_RS09285 6c7c372c18d2423f773484231fc8b6ce 235 Pfam PF04474 Protein of unknown function (DUF554) 3 227 1.3E-68 T 29-03-2018 IPR007563 Protein of unknown function DUF554 AM460_RS03635 73f22b7708e1d7ea086f6d51a40c67c7 70 Gene3D G3DSA:1.10.1220.10 3 42 4.2E-9 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM460_RS03635 73f22b7708e1d7ea086f6d51a40c67c7 70 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 41 3.6E-11 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM460_RS07970 1b45aff4a92a5c24bb94916cc3ee652b 220 Pfam PF09335 SNARE associated Golgi protein 48 173 5.7E-22 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS15870 9030c1c05bccbd63c9ee00333b30276d 47 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 1.3E-30 T 29-03-2018 IPR019672 Protein of unknown function DUF2627 AM460_RS01825 2e324a74ec7405e619235cc6b94be008 132 Pfam PF03994 Domain of Unknown Function (DUF350) 13 65 6.6E-12 T 29-03-2018 IPR007140 Protein of unknown function DUF350 AM460_RS01825 2e324a74ec7405e619235cc6b94be008 132 Pfam PF03994 Domain of Unknown Function (DUF350) 78 130 3.0E-7 T 29-03-2018 IPR007140 Protein of unknown function DUF350 AM460_RS16050 359cc2ab9a43705c447cacc1a5617997 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 1.8E-45 T 29-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM460_RS16050 359cc2ab9a43705c447cacc1a5617997 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 1.0E-41 T 29-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM460_RS16050 359cc2ab9a43705c447cacc1a5617997 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.673 T 29-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM460_RS16110 6449dcd2d0a59a0ba893f9b679694dbd 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 80 2.9E-28 T 29-03-2018 IPR009749 Protein of unknown function DUF1315 AM460_RS21905 7cdbd0652d1ebbc49aa2374abd369af3 330 Pfam PF04393 Protein of unknown function (DUF535) 48 325 1.6E-100 T 29-03-2018 IPR007488 Protein of unknown function DUF535 AM460_RS03930 858a958e2781e0b18675bd359a359f73 334 Pfam PF05035 2-keto-3-deoxy-galactonokinase 11 316 1.4E-92 T 29-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 AM460_RS14315 7c1e39550add47ece1f048ba1cac3fdc 157 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 60 157 2.0E-53 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS14315 7c1e39550add47ece1f048ba1cac3fdc 157 Pfam PF03230 Antirestriction protein 62 157 3.6E-36 T 29-03-2018 IPR004914 Antirestriction protein AM460_RS22645 029ef8d31b6e4eba21b7bb703a4276ae 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.4E-23 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM460_RS22645 029ef8d31b6e4eba21b7bb703a4276ae 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 1.4E-39 T 29-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 AM460_RS15490 b709f04c3a75b18d27876632be36a528 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 315 1.4E-45 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS15490 b709f04c3a75b18d27876632be36a528 328 Gene3D G3DSA:1.10.3470.10 27 321 1.7E-32 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS02060 6869292c1579b4b0631cb8153c509de2 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 3.7E-33 T 29-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AM460_RS17640 c4fe1a8022ddf0471db04283c2540c36 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 1.4E-43 T 29-03-2018 IPR019671 Protein of unknown function DUF2526 AM460_RS24860 d540689e1af81096d2a3ffcbadac3064 197 Pfam PF04224 Protein of unknown function, DUF417 3 182 7.0E-80 T 29-03-2018 IPR007339 Protein of unknown function DUF417 AM460_RS24860 d540689e1af81096d2a3ffcbadac3064 197 PIRSF PIRSF028065 83 181 3.5E-12 T 29-03-2018 IPR016865 Inner membrane protein RclC AM460_RS24860 d540689e1af81096d2a3ffcbadac3064 197 PIRSF PIRSF028065 6 60 7.3E-12 T 29-03-2018 IPR016865 Inner membrane protein RclC AM460_RS03950 90f97b03a077d4362bb5ed432662ba8d 496 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 439 1.7E-140 T 29-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AM460_RS18975 48bb0710770b0a7fcdf6fa06233cf976 464 Pfam PF11924 Inverse autotransporter, beta-domain 65 341 7.7E-100 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain AM460_RS03920 15ab42685f36ea5865a2ed3f70bf15f4 475 Gene3D G3DSA:1.20.5.340 148 298 2.2E-24 T 29-03-2018 AM460_RS03920 15ab42685f36ea5865a2ed3f70bf15f4 475 Pfam PF02646 RmuC family 136 432 4.3E-107 T 29-03-2018 IPR003798 DNA recombination RmuC AM460_RS27080 2b120e05dce4101752c1d54679e7e580 188 Pfam PF05309 TraE protein 1 182 8.3E-56 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 AM460_RS27080 2b120e05dce4101752c1d54679e7e580 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 5.1E-63 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 AM460_RS11150 9cc713333063e72705f1851e5cd3fdb4 120 Pfam PF10549 ORF11CD3 domain 51 103 6.4E-17 T 29-03-2018 IPR018877 Bacteriophage P22, Orf201, C-terminal AM460_RS24510 0467bb3e436dbdb8c4efe3d3fb17d469 385 Gene3D G3DSA:3.40.710.10 26 375 1.7E-71 T 29-03-2018 AM460_RS24510 0467bb3e436dbdb8c4efe3d3fb17d469 385 Pfam PF00144 Beta-lactamase 45 357 1.9E-64 T 29-03-2018 IPR001466 Beta-lactamase-related AM460_RS24510 0467bb3e436dbdb8c4efe3d3fb17d469 385 SUPERFAMILY SSF56601 33 361 1.68E-68 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM460_RS23770 dfd7216e097efae4ef15e312e0cfd946 433 Pfam PF00860 Permease family 9 394 9.4E-98 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM460_RS01015 a5eb67d1e90d08ada68daeaa4d755883 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 2.4E-53 T 29-03-2018 IPR026325 Protein of unknown function DUF932 AM460_RS26685 9d2cc726bda23dac7e011eb09449c2fe 722 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 38 671 9.6E-168 T 29-03-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY AM460_RS25665 449c36c971a94c97f318bd1840a3f631 65 Gene3D G3DSA:1.10.10.60 3 65 1.6E-7 T 29-03-2018 AM460_RS06005 8f66727642fb90c715defc8e471ff0f9 254 SMART SM00382 28 218 7.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM460_RS06005 8f66727642fb90c715defc8e471ff0f9 254 SUPERFAMILY SSF52540 16 241 5.01E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM460_RS06005 8f66727642fb90c715defc8e471ff0f9 254 Gene3D G3DSA:3.40.50.300 1 246 1.7E-50 T 29-03-2018 AM460_RS06005 8f66727642fb90c715defc8e471ff0f9 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM460_RS06005 8f66727642fb90c715defc8e471ff0f9 254 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 18 245 2.9E-106 T 29-03-2018 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 AM460_RS06005 8f66727642fb90c715defc8e471ff0f9 254 Pfam PF00005 ABC transporter 20 168 2.1E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM460_RS01870 50ba39a5e7587e96d30d0fca5fd4db4b 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 1.9E-21 T 29-03-2018 IPR019201 Protein of unknown function DUF2065 AM460_RS19840 2f82f9d23e6d98e310678c0e14489330 63 Pfam PF07131 Protein of unknown function (DUF1382) 1 61 8.5E-42 T 29-03-2018 IPR009814 Bacteriophage lambda, Xis (Q38267) AM460_RS26805 24233820d2c71de5890da4714c81a30c 144 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 5 142 6.8E-49 T 29-03-2018 IPR009385 Plasmid SOS inhibition AM460_RS02745 25fdf06ad3d108fdc19bec278d1c2b9a 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 3.0E-27 T 29-03-2018 IPR014318 Phage shock protein, PspG AM460_RS02745 25fdf06ad3d108fdc19bec278d1c2b9a 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 2.3E-26 T 29-03-2018 IPR014318 Phage shock protein, PspG AM460_RS04810 ee3828c3f3fdb5b7492172a2a4204a91 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 165 3.0E-94 T 29-03-2018 AM460_RS21580 18b0901e365ee628c41dbe2e52fb4030 116 Pfam PF15958 Domain of unknown function (DUF4761) 12 116 3.8E-67 T 29-03-2018 IPR031881 Protein of unknown function DUF4761 AM460_RS00355 72614c25c7813a0f4297cdf673c62f0f 498 Pfam PF06074 Protein of unknown function (DUF935) 27 493 8.4E-134 T 29-03-2018 IPR009279 Protein of unknown function DUF935 AM460_RS07940 c6b93a6e425486ed8c6a3fc0122d6c15 160 Pfam PF07681 DoxX 39 117 1.3E-17 T 29-03-2018 IPR032808 DoxX family AM460_RS20250 6f259138602043a6e267b4c0031e2b2e 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.2E-55 T 29-03-2018 IPR010835 Protein of unknown function DUF1439 AM460_RS17180 715552cc00b8648057e149949e26d2ab 186 Gene3D G3DSA:3.40.630.30 5 174 8.0E-35 T 29-03-2018 AM460_RS17180 715552cc00b8648057e149949e26d2ab 186 Pfam PF13302 Acetyltransferase (GNAT) domain 8 141 4.9E-21 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM460_RS17180 715552cc00b8648057e149949e26d2ab 186 SUPERFAMILY SSF55729 6 164 3.04E-41 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM460_RS20715 01f69ff97eb2baf3793e4041dd5e9dfe 220 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 216 25.771 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AM460_RS20715 01f69ff97eb2baf3793e4041dd5e9dfe 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 213 3.9E-46 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AM460_RS17885 10bc5b5b47085ccf460371385a028a02 88 Pfam PF00950 ABC 3 transport family 20 82 1.2E-6 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM460_RS18430 55f9283347efcd75be4a8769e04440c5 177 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 40 177 5.8E-33 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS27215 547db6c28b1fe9dd17c6dec80d949e81 139 Pfam PF07128 Protein of unknown function (DUF1380) 1 101 1.7E-12 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 AM460_RS04610 c3a49c5be1c8f377b69f56a6d791925d 195 Pfam PF03691 Uncharacterised protein family (UPF0167) 8 194 1.0E-67 T 29-03-2018 IPR005363 Uncharacterised protein family UPF0167 AM460_RS24990 6cfeb758a2d8685d750e1cac80c5ae05 204 Pfam PF07274 Protein of unknown function (DUF1440) 26 181 1.2E-54 T 29-03-2018 IPR009898 Protein of unknown function DUF1440 AM460_RS16615 8c63fc96f97653b11afadb2b7220c9a5 89 Pfam PF15930 Domain of unknown function 28 89 6.6E-43 T 29-03-2018 IPR031830 Uncharacterised protein YdiH AM460_RS12675 6eb62b4d0f25652a932a945e36286dda 274 Pfam PF11245 Protein of unknown function (DUF2544) 49 274 9.9E-81 T 29-03-2018 IPR021407 Protein of unknown function DUF2544 AM460_RS18335 e0feb7bbc229559059ba7d840c51f97b 631 Pfam PF09972 Predicted membrane protein (DUF2207) 35 573 1.8E-66 T 29-03-2018 IPR018702 Protein of unknown function DUF2207, membrane AM460_RS26630 841463e29c6da99275c0e6ad00328402 327 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 80 321 3.6E-59 T 29-03-2018 IPR022073 Putative outer membrane core complex of type IVb secretion AM460_RS07230 8228d7e366b2276f7bf5069d67ec76c3 367 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 6.8E-127 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM460_RS07230 8228d7e366b2276f7bf5069d67ec76c3 367 Pfam PF04085 rod shape-determining protein MreC 123 269 5.3E-36 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM460_RS19955 e81c453b5c2c84eace768dc482609993 262 Pfam PF04536 TPM domain 41 152 3.3E-6 T 29-03-2018 IPR007621 TPM domain AM460_RS21750 564c3ad865c6344f7ffecb3e3f1825b4 177 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 39 177 3.9E-37 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS08965 e8d98c33d9d0110ba59f1a25c62bdb37 116 Pfam PF05717 IS66 Orf2 like protein 9 106 7.9E-35 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AM460_RS16255 1a2432273cf0a5f7ab95aaeea1905fee 236 Pfam PF09335 SNARE associated Golgi protein 63 179 2.4E-27 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS17780 42952d8e9f391db6599ea5fe34a06fec 57 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 1 57 4.0E-26 T 29-03-2018 AM460_RS07175 7013244b03fbeefe3e0de496ed8a2414 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 6.4E-45 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM460_RS07175 7013244b03fbeefe3e0de496ed8a2414 329 Gene3D G3DSA:1.10.3470.10 26 325 1.8E-37 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM460_RS18510 ec35f60560b73d3311e9c397353e514c 114 Pfam PF11367 Protein of unknown function (DUF3168) 8 88 2.0E-10 T 29-03-2018 IPR021508 Tail completion protein AM460_RS20650 cc854c19434661b27ea42fab27e960c9 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 164 279 3.8E-32 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal AM460_RS20650 cc854c19434661b27ea42fab27e960c9 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 50 139 3.6E-8 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal AM460_RS20650 cc854c19434661b27ea42fab27e960c9 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 49 149 3.0E-26 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal AM460_RS20650 cc854c19434661b27ea42fab27e960c9 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 164 279 7.0E-63 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal AM460_RS26240 26f1551667c79d4a82cd647d6741e60d 131 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 1 131 3.0E-72 T 29-03-2018 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 AM460_RS26240 26f1551667c79d4a82cd647d6741e60d 131 Pfam PF07180 CaiF/GrlA transcriptional regulator 5 61 1.3E-6 T 29-03-2018 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 AM460_RS02185 9af1aa72c7e13573407ba244690d0f90 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 1.5E-28 T 29-03-2018 IPR010693 Divergent 4Fe-4S mono-cluster AM460_RS24100 b07e61a211cd339d73ef424fe70b80af 190 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 46 150 1.7E-41 T 29-03-2018 AM460_RS21510 f4d02ef0f3f0ca5d0b347f5d646b8a36 123 Pfam PF10743 Regulatory phage protein cox 31 110 2.6E-27 T 29-03-2018 IPR019679 Bacteriophage P2, regulatory protein Cox AM460_RS19985 62b5d92b8b5cf4b61c4492b80fe03321 357 Pfam PF01757 Acyltransferase family 7 326 3.7E-22 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM460_RS26440 ae004497d8c33eca043d89e204f3d058 84 Pfam PF10623 Plasmid conjugative transfer protein PilI 1 83 5.7E-47 T 29-03-2018 IPR018897 Plasmid conjugative transfer protein PilI AM460_RS03470 a5d1bdd1b361b80765545ea5339b209c 146 Pfam PF05656 Protein of unknown function (DUF805) 8 132 1.2E-21 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM460_RS14290 14b09aac3ad116a09cee93b3a206454c 124 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 1.8E-56 T 29-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system AM460_RS18600 a209b1d366dfc7f0289e49646c7cf84e 114 Pfam PF07041 Protein of unknown function (DUF1327) 1 112 2.7E-61 T 29-03-2018 IPR009759 Bacteriophage ES18, Gp24 AM460_RS16010 455f98bebfeb521aa6aa9acd749a3b4e 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.8E-17 T 29-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AM460_RS15030 17485a0952b974dc67a3569f61055394 137 Pfam PF13987 YedD-like protein 25 129 6.8E-55 T 29-03-2018 IPR025596 YedD-like protein AM460_RS25335 b0efae29d05b5ca2484bef872486112d 274 SUPERFAMILY SSF54001 64 160 5.23E-29 T 29-03-2018 AM460_RS25335 b0efae29d05b5ca2484bef872486112d 274 SUPERFAMILY SSF54001 201 260 5.23E-29 T 29-03-2018 AM460_RS25335 b0efae29d05b5ca2484bef872486112d 274 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 65 156 1.6E-9 T 29-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM460_RS25335 b0efae29d05b5ca2484bef872486112d 274 Gene3D G3DSA:3.90.1720.10 61 252 1.9E-28 T 29-03-2018 AM460_RS19455 8b08c833e3518549015b4b6fa73d2b24 109 Gene3D G3DSA:1.10.890.10 31 101 0.0014 T 29-03-2018 AM460_RS19455 8b08c833e3518549015b4b6fa73d2b24 109 Pfam PF16456 YmgD protein 26 107 1.6E-48 T 29-03-2018 IPR032497 Uncharacterised protein YmgD AM460_RS09025 9fef55ec7dfc5fd6dc552075477d7007 329 SUPERFAMILY SSF52266 303 328 2.11E-39 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS09025 9fef55ec7dfc5fd6dc552075477d7007 329 SUPERFAMILY SSF52266 14 271 2.11E-39 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM460_RS09025 9fef55ec7dfc5fd6dc552075477d7007 329 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 18 213 5.1E-11 T 29-03-2018 IPR005181 Sialate O-acetylesterase domain AM460_RS09025 9fef55ec7dfc5fd6dc552075477d7007 329 Gene3D G3DSA:3.40.50.1110 13 327 1.8E-26 T 29-03-2018 AM460_RS16600 5be097b8ae749bf16dd50bec75f372a4 370 Pfam PF01594 AI-2E family transporter 15 344 1.4E-65 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AM460_RS14045 18f148d0376327eedf7f76643002a40a 617 Pfam PF05170 AsmA family 225 511 1.1E-23 T 29-03-2018 IPR007844 AsmA AM460_RS26165 d00d546f64ec8ac7fb3d46e5e822b3ec 77 Pfam PF07362 Post-segregation antitoxin CcdA 8 77 8.7E-26 T 29-03-2018 IPR009956 Post-segregation antitoxin CcdA AM460_RS20640 caf21cb721a1a2659c949691d6861497 378 PIRSF PIRSF000267 2 377 3.0E-117 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM460_RS20640 caf21cb721a1a2659c949691d6861497 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.1E-198 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM460_RS20640 caf21cb721a1a2659c949691d6861497 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.7E-97 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM460_RS26010 b0d7e14348bbe9ca5277cc67cff46ff4 28 Pfam PF08054 Leucine operon leader peptide 1 28 2.6E-19 T 29-03-2018 IPR012570 Leucine operon leader peptide GO:0009098 AM460_RS23825 d46d61a0105ee5e8233a0cf2a77c5aed 222 Pfam PF11153 Protein of unknown function (DUF2931) 8 220 2.1E-38 T 29-03-2018 IPR021326 Protein of unknown function DUF2931 AM460_RS01180 c6429aeddd5c48fa872d0cdfcb48d5fe 137 Gene3D G3DSA:3.40.50.720 11 79 0.0012 T 29-03-2018 AM460_RS18350 a656f81e21bd955cd09a74e9d6759db3 14 Pfam PF08255 Trp-operon Leader Peptide 1 14 3.2E-9 T 29-03-2018 IPR013205 Leader peptide, tryptophan-operon AM460_RS03990 3831c5888fedb26f394af969be5cdb3c 129 Gene3D G3DSA:3.10.490.10 1 128 4.9E-24 T 29-03-2018 AM460_RS01705 578121ea44b60bda76de5002745c134f 253 Pfam PF07804 HipA-like C-terminal domain 15 228 1.7E-46 T 29-03-2018 IPR012893 HipA-like, C-terminal AM460_RS26590 0398e8fbf58574e25783bfdb4af32b90 152 Pfam PF16816 DotD protein 71 145 3.7E-18 T 29-03-2018 IPR031817 DotD protein AM460_RS21755 947614c5f4e8c6cd35b716bcbb72908a 175 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 40 175 1.6E-39 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM460_RS19855 ea0f5e4f659f67519e2757a4d86c8973 108 Gene3D G3DSA:2.30.130.30 1 107 9.9E-5 T 29-03-2018 AM460_RS26485 c110258599459a736a4bd4f33c04abcb 365 Pfam PF00482 Type II secretion system (T2SS), protein F 27 150 1.3E-6 T 29-03-2018 IPR018076 Type II secretion system F domain AM460_RS26485 c110258599459a736a4bd4f33c04abcb 365 Pfam PF00482 Type II secretion system (T2SS), protein F 232 352 3.2E-13 T 29-03-2018 IPR018076 Type II secretion system F domain AM460_RS21650 4016f1839d7b965008663eee90b0b9d3 165 Pfam PF15956 Domain of unknown function (DUF4760) 21 161 6.0E-54 T 29-03-2018 IPR031876 Protein of unknown function DUF4760 AM460_RS18500 ada21a58e30d6190800ecacea6e24889 124 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 63 - T 29-03-2018 IPR010916 TonB box, conserved site AM460_RS18500 ada21a58e30d6190800ecacea6e24889 124 Pfam PF06222 Phage tail assembly chaperone 1 124 1.6E-58 T 29-03-2018 IPR010411 Bacteriophage tail assembly protein, Gp13/14 AM460_RS04735 b2b13b1c02462fa5bfa24302dcd2eba9 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 286 1.3E-96 T 29-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 AM460_RS01125 a611b4395e6af34de246371cb3949fe4 457 Pfam PF13449 Esterase-like activity of phytase 58 396 2.1E-50 T 29-03-2018 IPR027372 Phytase-like domain AM460_RS24980 8f2617947e8eb0f318b70d59abc83627 109 Pfam PF03692 Putative zinc- or iron-chelating domain 6 98 1.7E-12 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM460_RS12550 cc4eb4ab4122a6c11fa73effb5ebb42f 196 Pfam PF10554 Ash protein family 26 141 2.4E-24 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein AM460_RS15290 ff5b541f4756a617ab602ead759b59bd 90 Pfam PF05449 Putative 3TM holin, Phage_holin_3 11 86 7.0E-23 T 29-03-2018 IPR008473 Putative 3TM holin, Phage holin 3 AM460_RS05490 d7997edec107c0e6dafb6563581aac7f 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 231 1.8E-93 T 29-03-2018 IPR021413 Protein of unknown function DUF3053 AM460_RS12940 dadb23aca088493e208ad39c45dda147 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 157 3.5E-33 T 29-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM460_RS08230 f9f917a1183296d395a359eb3f1a47a5 19 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 19 7.9E-12 T 29-03-2018 IPR025881 Toxin Ibs AM460_RS18905 22a4ee42fa708d44036b03a2944f1f45 374 Pfam PF04116 Fatty acid hydroxylase superfamily 78 211 6.9E-27 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AM460_RS12860 957393d58ba08f00c4dc8206d69808a0 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 1.4E-57 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 AM460_RS12860 957393d58ba08f00c4dc8206d69808a0 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.961 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 AM460_RS21785 2788e3135e6a0dfb2a65b975e2018f95 78 Pfam PF06528 Phage P2 GpE 37 72 1.1E-12 T 29-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 AM460_RS00275 fcc8a738509cd93355d6ccd89a367ead 71 Pfam PF05489 Phage Tail Protein X 6 58 2.4E-17 T 29-03-2018 IPR008861 Phage Tail Protein X-like AM460_RS21205 fcc8a738509cd93355d6ccd89a367ead 71 Pfam PF05489 Phage Tail Protein X 6 58 2.4E-17 T 29-03-2018 IPR008861 Phage Tail Protein X-like AM460_RS26990 ba5b46818f51f9773565af008e750663 256 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 2 206 2.5E-73 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM460_RS14280 5e041e0b89834b43b36b05960042b0be 37 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 8 37 1.2E-9 T 29-03-2018 IPR009301 Protein of unknown function DUF957 AM460_RS21090 c5673e144e96a887fc51c93e989f8448 116 Pfam PF13272 Putative 2/3 transmembrane domain holin 16 116 8.8E-40 T 29-03-2018 IPR025140 Putative 2/3 transmembrane domain holin AM460_RS00380 f646eff21488d5f454dde47ed71a6f9e 203 Gene3D G3DSA:1.20.1170.10 22 203 6.0E-6 T 29-03-2018 AM460_RS26910 aa157464e935f610e94aafbcd0182835 138 Pfam PF10784 Plasmid stability protein 8 79 7.2E-28 T 29-03-2018 IPR019720 Plasmid stability protein, StbB AM460_RS12055 f9c34a6b23fe0e4fa429977741cad5f0 347 Pfam PF06674 Protein of unknown function (DUF1176) 25 347 3.2E-98 T 29-03-2018 IPR009560 Protein of unknown function DUF1176 AM460_RS08455 4e549637bb922d97a25ad5923ca7c031 160 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 154 4.1E-26 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AM460_RS11890 c12b5ef0c6dd1862a1773a26d182306a 172 Pfam PF05433 Glycine zipper 2TM domain 73 114 7.1E-8 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM460_RS11500 962d4fcebb60e4ebfeeeb772f9870fd3 195 Pfam PF01810 LysE type translocator 15 194 3.9E-14 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM460_RS02560 d2d083b412e2d79ee2a31761464e1cee 136 Pfam PF03788 LrgA family 32 122 1.6E-25 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 AM460_RS01395 8a3198a08c3043736c517d2711479048 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 5.5E-116 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AM460_RS01395 8a3198a08c3043736c517d2711479048 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 2.4E-72 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM460_RS07775 39cf10cc54ad0e25226e848764bc1cf1 292 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 291 1.5E-92 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM460_RS00770 7cbd5b2fcab772bec69158cce8668da0 153 Pfam PF07670 Nucleoside recognition 27 90 6.8E-9 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM460_RS00360 053bc55f20b8bbdefe3ee2716fef1477 507 PIRSF PIRSF007056 1 506 2.0E-237 T 29-03-2018 IPR012036 Bacteriophage Mu, Gp28 AM460_RS12610 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 30 43 4.9E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM460_RS12610 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 48 64 4.9E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM460_RS12610 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 138 155 4.9E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM460_RS12610 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 99 116 4.9E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM460_RS12610 1bd30368f210cbeefcd2a69dbb8b491a 251 Pfam PF04333 MlaA lipoprotein 29 222 6.3E-67 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM460_RS21775 8cea1f4e911091de0ac89f4110e739f3 164 Pfam PF06995 Phage P2 GpU 8 127 8.3E-38 T 29-03-2018 IPR009734 Myoviridae, GpU AM460_RS21775 8cea1f4e911091de0ac89f4110e739f3 164 PIRSF PIRSF029208 1 158 1.6E-62 T 29-03-2018 IPR016912 Bacteriophage P2, GpU AM460_RS06735 f7eedf512dcd2ecef19d0652fbafd476 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 1.3E-14 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM460_RS26065 7eed216044ddb2a6a2ef1bc1bc583f93 495 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 16 439 3.7E-124 T 29-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AM460_RS27280 5610345387c0ed6aa3c242b35d60ed73 295 TIGRFAM TIGR04424 metallo_McbB: McbB family protein 13 294 1.4E-86 T 29-03-2018 IPR030956 Microcin B17-processing protein McbB AM460_RS09875 2e8772e4139a5c9333f3cfb4f88bd647 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 379 4.8E-11 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM460_RS09615 38a95d84901e00f2c24db98e397096fa 19 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 19 5.5E-12 T 29-03-2018 IPR025881 Toxin Ibs AM460_RS03945 284a57a96fdd03e98f31a4cf130e6749 168 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 23 162 3.5E-21 T 29-03-2018 IPR009936 Protein of unknown function DUF1468 AM460_RS20125 53fd3b3ffa801fe18b080a169dc0e83d 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 1.4E-19 T 29-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AM460_RS13700 dacf8958b65df1f1a5cefd58154fc07b 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 3.0E-44 T 29-03-2018 IPR009698 Protein of unknown function DUF1282 AM460_RS07780 6411c997c6374d0b5809a22358cbf04d 259 Pfam PF03609 PTS system sorbose-specific iic component 5 236 4.0E-72 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM460_RS02040 b8fbd7e971e10d4cb10475b0eb1206c3 117 Gene3D G3DSA:3.50.50.60 7 94 0.0011 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM460_RS02040 b8fbd7e971e10d4cb10475b0eb1206c3 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 2.7E-32 T 29-03-2018 IPR025294 Protein of unknown function DUF4156 AM460_RS05575 ae93da7c88aeb9777280d6c3c8ba1f21 423 Pfam PF03222 Tryptophan/tyrosine permease family 21 404 3.2E-6 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM460_RS26800 ea9ef5bd6a5ea3f1e8f9b68373bbcfde 239 Pfam PF06952 PsiA protein 2 235 1.5E-72 T 29-03-2018 IPR009713 Uncharacterised protein family PsiA AM460_RS17645 f3a03d81bbe7de32fe50e39362f0bd92 73 Pfam PF10753 Toxin GhoT_OrtT 20 73 1.2E-27 T 29-03-2018 IPR019689 Toxin GhoT/OrtT AM460_RS09380 06fd6953cb87860372addbefa67a6dc4 184 Pfam PF02325 YGGT family 104 167 1.1E-15 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 AM460_RS09380 06fd6953cb87860372addbefa67a6dc4 184 Pfam PF02325 YGGT family 10 78 1.0E-21 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 AM460_RS05365 1bd48621e15f3439f06ad2a350127cef 155 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 18 145 5.8E-30 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AM460_RS18385 b853cc3316c3e1b0d95b835d4c7356df 91 Pfam PF10554 Ash protein family 9 82 4.5E-9 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein AM460_RS27920 de164874dcb4feb356f2bacc2be079ba 217 Pfam PF02517 CAAX protease self-immunity 121 207 9.9E-15 T 29-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AM460_RS26640 36deec49dd66d7c999f23e13f398b774 234 Gene3D G3DSA:1.20.120.20 93 226 5.9E-4 T 29-03-2018 AM460_RS11155 a077337e3d230fae639f42d20eb7a0cb 164 Pfam PF07278 Protein of unknown function (DUF1441) 10 151 7.9E-48 T 29-03-2018 IPR009901 Bacteriophage VT1-Sakai, H0025 AM460_RS20360 abdb3363f7dc57220464db0d83ad70a7 152 Pfam PF07012 Curlin associated repeat 41 75 9.1E-9 T 29-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AM460_RS20360 abdb3363f7dc57220464db0d83ad70a7 152 Pfam PF07012 Curlin associated repeat 87 120 1.0E-9 T 29-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AM460_RS20360 abdb3363f7dc57220464db0d83ad70a7 152 Pfam PF07012 Curlin associated repeat 109 142 1.2E-6 T 29-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AM460_RS21680 8d77db4f8ab05e9a455bfd0bac6bd679 266 Pfam PF05944 Phage small terminase subunit 36 169 3.2E-37 T 29-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AM460_RS12755 5cb3c2151df8dcf2cf314a83f6e5b1b8 219 Pfam PF09335 SNARE associated Golgi protein 49 176 4.4E-27 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM460_RS08775 2c201ba0b4df44054600b5d4b90a0f18 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 366 620 4.8E-43 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 AM460_RS08775 2c201ba0b4df44054600b5d4b90a0f18 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 37 299 2.6E-55 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 AM460_RS17845 26ff3acfc999ae35f1c36912b23a25ad 879 Pfam PF11739 Dicarboxylate transport 657 858 2.4E-62 T 29-03-2018 IPR021730 Dicarboxylate transport AM460_RS00745 3ff47eb6656b66d93c5cc779bf9d2e16 85 Pfam PF11823 Protein of unknown function (DUF3343) 3 56 8.7E-12 T 29-03-2018 IPR021778 Domain of unknown function DUF3343 AM460_RS09345 f83604464c9f9bf3169ed2495bbc4d5d 335 Pfam PF06717 Protein of unknown function (DUF1202) 14 320 4.2E-196 T 29-03-2018 IPR009592 Protein of unknown function DUF1202 AM460_RS27290 31a24101ec49c75e3e38c06bb056e258 396 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 53 272 4.2E-15 T 29-03-2018 IPR003776 YcaO-like domain AM460_RS20610 12d246d8816a6232049dfe3015021a51 76 Pfam PF15939 Putative antitoxin of bacterial toxin-antitoxin system 1 76 1.2E-56 T 29-03-2018 IPR031853 Putative antitoxin YmcE AM460_RS00730 198d1e65ceedb4660dc30d4b0845939f 426 Pfam PF04286 Protein of unknown function (DUF445) 44 417 3.1E-108 T 29-03-2018 IPR007383 Protein of unknown function DUF445 AM460_RS01415 8659fbcae71cce0d57054d3277be7421 398 Pfam PF05987 Bacterial protein of unknown function (DUF898) 13 367 1.2E-44 T 29-03-2018 IPR010295 Protein of unknown function DUF898 AM460_RS08815 b7014ad9e36aa7f59d1d0b7edc10cd9e 281 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 9.3E-58 T 29-03-2018 IPR031339 Domain of unknown function DUF4942 AM460_RS11365 fd2eff2e427e301931fc785ccd9524cf 172 Pfam PF13689 Domain of unknown function (DUF4154) 34 167 5.3E-29 T 29-03-2018 IPR025293 Protein of unknown function DUF4154 AM460_RS27515 98924318460f34086a28b567aee1af45 75 Pfam PF05509 TraY domain 14 61 2.0E-23 T 29-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677