locus-tag	class	description
AM365_RS00010	COG5339	Protein conserved in bacteria
AM365_RS00015	COG1482	cell wall glycoprotein biosynthetic process
AM365_RS00020	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM365_RS00020	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM365_RS00025	COG0114	fumarate hydratase activity
AM365_RS00035	COG2205	protein histidine kinase activity
AM365_RS00040	COG0745	RESPONSE REGULATOR receiver
AM365_RS00045	COG3136	membrane protein required for alginate biosynthesis
AM365_RS00055	COG0531	amino acid
AM365_RS00070	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AM365_RS00075	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AM365_RS00080	COG0628	permease
AM365_RS00095	COG3591	Belongs to the peptidase S1B family
AM365_RS00115	COG2814	Major facilitator Superfamily
AM365_RS00120	COG0583	DNA-binding transcription factor activity
AM365_RS00125	COG1940	carbohydrate kinase activity
AM365_RS00130	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM365_RS00140	COG3381	protein complex oligomerization
AM365_RS00145	COG3302	dmso reductase anchor subunit
AM365_RS00150	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS00155	COG0243	molybdopterin cofactor binding
AM365_RS00160	COG0243	molybdopterin cofactor binding
AM365_RS00195	COG0243	molybdopterin cofactor binding
AM365_RS00210	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM365_RS00230	COG4948	Mandelate Racemase Muconate Lactonizing
AM365_RS00235	COG1063	alcohol dehydrogenase
AM365_RS00245	COG0582	viral genome integration into host DNA
AM365_RS00255	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM365_RS00290	COG1396	sequence-specific DNA binding
AM365_RS00305	COG1846	Transcriptional regulator
AM365_RS00320	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM365_RS00350	COG1403	HNH endonuclease
AM365_RS00365	COG3272	Protein of unknown function (DUF1722)
AM365_RS00380	COG3772	lysozyme
AM365_RS00410	COG5301	cellulose 1,4-beta-cellobiosidase activity
AM365_RS00415	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AM365_RS00425	COG0477	Major facilitator Superfamily
AM365_RS00430	COG0246	Mannitol dehydrogenase
AM365_RS00440	COG1802	Transcriptional regulator
AM365_RS00445	COG4221	oxidoreductase activity
AM365_RS00455	COG0339	signal peptide processing
AM365_RS00465	COG1546	Belongs to the CinA family
AM365_RS00470	COG3111	PFAM Bacterial OB fold (BOF) protein
AM365_RS00475	COG3706	GGDEF domain
AM365_RS00485	COG2814	Major facilitator Superfamily
AM365_RS00490	COG0697	spore germination
AM365_RS00495	COG2188	Transcriptional regulator
AM365_RS00505	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM365_RS00510	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM365_RS00520	COG2723	6-phospho-beta-galactosidase activity
AM365_RS00530	COG4977	sequence-specific DNA binding
AM365_RS00535	COG1846	Transcriptional regulator
AM365_RS00560	COG0583	DNA-binding transcription factor activity
AM365_RS00565	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS00570	COG2066	Belongs to the glutaminase family
AM365_RS00585	COG2199	diguanylate cyclase activity
AM365_RS00605	COG3781	membrane
AM365_RS00655	COG2911	Protein conserved in bacteria
AM365_RS00655	COG3210	domain, Protein
AM365_RS00660	COG1396	sequence-specific DNA binding
AM365_RS00665	COG3550	peptidyl-serine autophosphorylation
AM365_RS00685	COG3539	Fimbrial protein
AM365_RS00695	COG3188	usher protein
AM365_RS00700	COG3539	Fimbrial protein
AM365_RS00705	COG3539	Fimbrial protein
AM365_RS00710	COG3539	Fimbrial protein
AM365_RS00715	COG0243	molybdopterin cofactor binding
AM365_RS00725	COG2207	Transcriptional regulator
AM365_RS00730	COG3119	arylsulfatase activity
AM365_RS00735	COG0641	radical SAM
AM365_RS00750	COG4178	(ABC) transporter
AM365_RS00755	COG4771	TonB-dependent receptor
AM365_RS00760	COG0612	Peptidase, M16
AM365_RS00770	COG0076	glutamate decarboxylase activity
AM365_RS00775	COG0531	amino acid
AM365_RS00780	COG1649	PFAM Uncharacterised BCR, COG1649
AM365_RS00790	COG2200	EAL domain
AM365_RS00790	COG2199	diguanylate cyclase activity
AM365_RS00790	COG2202	Pas domain
AM365_RS00795	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
AM365_RS00800	COG0747	negative chemotaxis
AM365_RS00805	COG0601	transmembrane transport
AM365_RS00810	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM365_RS00815	COG0444	Belongs to the ABC transporter superfamily
AM365_RS00820	COG4608	Belongs to the ABC transporter superfamily
AM365_RS00825	COG1764	response to oxidative stress
AM365_RS00850	COG1064	alcohol dehydrogenase
AM365_RS00855	COG3093	addiction module antidote protein HigA
AM365_RS00860	COG2864	formate dehydrogenase
AM365_RS00865	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS00875	COG0697	spore germination
AM365_RS00880	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM365_RS00885	COG4886	Leucine-rich repeat (LRR) protein
AM365_RS00895	COG4886	Leucine-rich repeat (LRR) protein
AM365_RS00900	COG2223	nitrite transmembrane transporter activity
AM365_RS00905	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM365_RS00910	COG1140	nitrate reductase beta subunit
AM365_RS00915	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM365_RS00920	COG2181	nitrate reductase activity
AM365_RS00925	COG0384	phenazine biosynthesis protein PhzF
AM365_RS00930	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AM365_RS00935	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM365_RS00955	COG3209	COG3209 Rhs family protein
AM365_RS00965	COG0625	glutathione transferase activity
AM365_RS00970	COG1113	amino acid transport
AM365_RS00975	COG3391	amine dehydrogenase activity
AM365_RS00990	COG4772	TonB-dependent receptor
AM365_RS00995	COG1802	Transcriptional regulator
AM365_RS01000	COG2130	NADP-dependent
AM365_RS01010	COG1247	-acetyltransferase
AM365_RS01015	COG3238	Protein conserved in bacteria
AM365_RS01050	COG1177	transmembrane transport
AM365_RS01055	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM365_RS01060	COG3842	ATPase activity
AM365_RS01065	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM365_RS01070	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM365_RS01075	COG1598	PFAM Uncharacterised protein family UPF0150
AM365_RS01080	COG1724	mRNA binding
AM365_RS01090	COG0826	peptidase U32
AM365_RS01095	COG1396	sequence-specific DNA binding
AM365_RS01100	COG3135	benzoate transporter
AM365_RS01105	COG0675	Transposase, IS605 OrfB family
AM365_RS01120	COG0500	methyltransferase
AM365_RS01125	COG1275	C4-dicarboxylate transporter malic acid transport protein
AM365_RS01130	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM365_RS01135	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM365_RS01140	COG2841	Protein conserved in bacteria
AM365_RS01160	COG5383	Protein conserved in bacteria
AM365_RS01165	COG0583	DNA-binding transcription factor activity
AM365_RS01170	COG0840	transmembrane signaling receptor activity
AM365_RS01185	COG3038	cytochrome b561
AM365_RS01190	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM365_RS01195	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS01200	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM365_RS01205	COG1643	Atp-dependent helicase
AM365_RS01215	COG0671	phosphoesterase, PA-phosphatase related
AM365_RS01215	COG2453	phosphatase
AM365_RS01220	COG2267	carboxylic ester hydrolase activity
AM365_RS01225	COG4589	Belongs to the CDS family
AM365_RS01230	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM365_RS01240	COG0667	Aldo Keto reductase
AM365_RS01245	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM365_RS01250	COG3327	negative regulation of DNA-templated transcription, initiation
AM365_RS01255	COG2030	dehydratase
AM365_RS01255	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS01260	COG3733	amine oxidase
AM365_RS01265	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS01270	COG2207	Transcriptional regulator
AM365_RS01275	COG3784	Protein of unknown function (DUF1318)
AM365_RS01285	COG2911	Protein conserved in bacteria
AM365_RS01290	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AM365_RS01295	COG3187	Heat shock protein
AM365_RS01300	COG3042	response to heat
AM365_RS01305	COG0674	pyruvate-flavodoxin oxidoreductase activity
AM365_RS01305	COG1013	pyruvate-flavodoxin oxidoreductase activity
AM365_RS01305	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AM365_RS01305	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM365_RS01315	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM365_RS01320	COG0589	response to stress
AM365_RS01330	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM365_RS01335	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AM365_RS01340	COG5301	cellulose 1,4-beta-cellobiosidase activity
AM365_RS01345	COG2801	Transposase and inactivated derivatives
AM365_RS01350	COG2963	transposase activity
AM365_RS01370	COG2814	Major facilitator Superfamily
AM365_RS01375	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AM365_RS01395	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM365_RS01460	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM365_RS01465	COG3723	Recombinational DNA repair protein, rece pathway
AM365_RS01485	COG0582	viral genome integration into host DNA
AM365_RS01495	COG0513	Belongs to the DEAD box helicase family
AM365_RS01510	COG3706	GGDEF domain
AM365_RS01515	COG2840	Smr protein MutS2
AM365_RS01520	COG0583	DNA-binding transcription factor activity
AM365_RS01525	COG1473	amidohydrolase
AM365_RS01530	COG1473	amidohydrolase
AM365_RS01540	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AM365_RS01545	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM365_RS01550	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM365_RS01555	COG0589	response to stress
AM365_RS01560	COG3182	Iron-regulated membrane protein
AM365_RS01565	COG0668	transmembrane transport
AM365_RS01570	COG4166	transmembrane transport
AM365_RS01575	COG0583	DNA-binding transcription factor activity
AM365_RS01580	COG1073	alpha beta
AM365_RS01585	COG1073	alpha beta
AM365_RS01590	COG0702	epimerase
AM365_RS01595	COG2866	Carboxypeptidase
AM365_RS01600	COG4948	Mandelate Racemase Muconate Lactonizing
AM365_RS01605	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AM365_RS01610	COG3283	Transcriptional regulator of aromatic amino acids metabolism
AM365_RS01620	COG3106	COG3106 Predicted ATPase
AM365_RS01625	COG1609	Transcriptional regulator
AM365_RS01635	COG3842	ATPase activity
AM365_RS01640	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM365_RS01645	COG1554	hydrolase, family 65, central catalytic
AM365_RS01650	COG0673	inositol 2-dehydrogenase activity
AM365_RS01655	COG1082	Xylose isomerase domain protein TIM barrel
AM365_RS01660	COG1063	alcohol dehydrogenase
AM365_RS01665	COG0395	ABC-type sugar transport system, permease component
AM365_RS01670	COG1175	transmembrane transport
AM365_RS01675	COG1653	transport
AM365_RS01680	COG0366	Alpha amylase catalytic
AM365_RS01685	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM365_RS01695	COG1983	PspC domain protein
AM365_RS01705	COG1842	Phage shock protein A
AM365_RS01710	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM365_RS01715	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM365_RS01720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM365_RS01725	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS01735	COG1917	Cupin 2, conserved barrel domain protein
AM365_RS01735	COG1396	sequence-specific DNA binding
AM365_RS01740	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AM365_RS01745	COG0174	glutamine synthetase
AM365_RS01750	COG0531	amino acid
AM365_RS01765	COG4166	transmembrane transport
AM365_RS01770	COG4168	peptide transport system, permease
AM365_RS01775	COG4171	peptide transport system, permease
AM365_RS01780	COG4172	Belongs to the ABC transporter superfamily
AM365_RS01785	COG4172	Belongs to the ABC transporter superfamily
AM365_RS01790	COG2852	Protein conserved in bacteria
AM365_RS01800	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AM365_RS01805	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM365_RS01805	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM365_RS01820	COG5001	Diguanylate cyclase
AM365_RS01830	COG1349	DNA-binding transcription factor activity
AM365_RS01840	COG0023	Translation Initiation Factor
AM365_RS01850	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AM365_RS01855	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AM365_RS01860	COG0671	phosphoesterase, PA-phosphatase related
AM365_RS01870	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM365_RS01890	COG0583	DNA-binding transcription factor activity
AM365_RS01900	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM365_RS01915	COG0616	signal peptide processing
AM365_RS01920	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS01925	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
AM365_RS01930	COG1187	pseudouridine synthase activity
AM365_RS01935	COG0009	L-threonylcarbamoyladenylate synthase
AM365_RS01940	COG0613	PHP domain protein
AM365_RS01950	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AM365_RS01955	COG0512	Glutamine amidotransferase of anthranilate synthase
AM365_RS01955	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM365_RS01960	COG0135	phosphoribosylanthranilate isomerase activity
AM365_RS01960	COG0134	indole-3-glycerol-phosphate synthase activity
AM365_RS01975	COG3729	General stress protein
AM365_RS01980	COG3685	Protein conserved in bacteria
AM365_RS01985	COG3685	Protein conserved in bacteria
AM365_RS01990	COG3047	cAMP biosynthetic process
AM365_RS02010	COG1607	acyl-coa hydrolase
AM365_RS02020	COG2350	Protein conserved in bacteria
AM365_RS02025	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM365_RS02165	COG1783	phage Terminase large subunit
AM365_RS02295	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM365_RS02320	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM365_RS02340	COG4608	Belongs to the ABC transporter superfamily
AM365_RS02345	COG0444	Belongs to the ABC transporter superfamily
AM365_RS02350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM365_RS02355	COG0601	transmembrane transport
AM365_RS02360	COG4166	transmembrane transport
AM365_RS02370	COG2095	MarC family integral membrane protein
AM365_RS02375	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS02375	COG1454	alcohol dehydrogenase
AM365_RS02385	COG1435	thymidine kinase activity
AM365_RS02395	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AM365_RS02400	COG0745	RESPONSE REGULATOR receiver
AM365_RS02405	COG1752	Esterase of the alpha-beta hydrolase superfamily
AM365_RS02415	COG0788	formyltetrahydrofolate deformylase activity
AM365_RS02440	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS02445	COG2181	nitrate reductase activity
AM365_RS02450	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM365_RS02455	COG1140	nitrate reductase beta subunit
AM365_RS02460	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM365_RS02465	COG2223	nitrite transmembrane transporter activity
AM365_RS02475	COG3850	Histidine kinase
AM365_RS02480	COG2197	response regulator
AM365_RS02485	COG4932	domain protein
AM365_RS02490	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AM365_RS02495	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AM365_RS02500	COG4572	Cation transport regulator
AM365_RS02505	COG0387	Pfam Sodium calcium exchanger
AM365_RS02535	COG2912	Transglutaminase-like superfamily
AM365_RS02540	COG3094	Invasion gene expression up-regulator, SirB
AM365_RS02545	COG2890	protein-(glutamine-N5) methyltransferase activity
AM365_RS02570	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AM365_RS02575	COG0659	secondary active sulfate transmembrane transporter activity
AM365_RS02590	COG0012	GTP binding
AM365_RS02595	COG0582	viral genome integration into host DNA
AM365_RS02600	COG2801	Transposase and inactivated derivatives
AM365_RS02605	COG2963	transposase activity
AM365_RS02610	COG2826	transposase and inactivated derivatives, IS30 family
AM365_RS02615	COG2963	transposase activity
AM365_RS02660	COG5290	Psort location Cytoplasmic, score
AM365_RS02680	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM365_RS02700	COG2003	Belongs to the UPF0758 family
AM365_RS02715	COG3423	Transcriptional regulator
AM365_RS02770	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS02775	COG3284	Transcriptional regulator
AM365_RS02780	COG2376	Dihydroxyacetone kinase
AM365_RS02785	COG1461	Dihydroxyacetone kinase
AM365_RS02790	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
AM365_RS02790	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS02790	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM365_RS02815	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
AM365_RS02830	COG1619	proteins homologs of microcin C7 resistance protein MccF
AM365_RS02840	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM365_RS02850	COG2719	SpoVR family
AM365_RS02865	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AM365_RS02870	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM365_RS02875	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM365_RS02880	COG3344	reverse transcriptase
AM365_RS02900	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM365_RS02930	COG2894	cell division
AM365_RS02990	COG2200	EAL domain
AM365_RS03015	COG2200	EAL domain
AM365_RS03020	COG0789	Transcriptional regulator
AM365_RS03025	COG5562	phage envelope protein
AM365_RS03035	COG0538	isocitrate dehydrogenase activity
AM365_RS03040	COG1187	pseudouridine synthase activity
AM365_RS03060	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AM365_RS03070	COG2205	protein histidine kinase activity
AM365_RS03075	COG2850	peptidyl-arginine hydroxylation
AM365_RS03100	COG1177	transmembrane transport
AM365_RS03105	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM365_RS03115	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AM365_RS03120	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AM365_RS03130	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM365_RS03135	COG1136	(ABC) transporter
AM365_RS03140	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM365_RS03145	COG4763	Acyl-transferase
AM365_RS03150	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AM365_RS03155	COG1376	ErfK ybiS ycfS ynhG family protein
AM365_RS03155	COG1388	LysM domain
AM365_RS03165	COG1309	transcriptional regulator
AM365_RS03170	COG3134	Outer membrane lipoprotein
AM365_RS03180	COG1252	NADH dehydrogenase
AM365_RS03200	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
AM365_RS03205	COG5633	Lipoprotein
AM365_RS03210	COG0537	adenosine 5'-monophosphoramidase activity
AM365_RS03215	COG4773	Receptor
AM365_RS03220	COG1263	PTS System
AM365_RS03220	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS03225	COG0084	hydrolase, TatD family'
AM365_RS03230	COG0470	DNA polymerase III
AM365_RS03240	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AM365_RS03245	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM365_RS03250	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM365_RS03260	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS03265	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM365_RS03285	COG1399	metal-binding, possibly nucleic acid-binding protein
AM365_RS03290	COG0424	maF-like protein
AM365_RS03295	COG0564	pseudouridine synthase activity
AM365_RS03305	COG1530	ribonuclease E activity
AM365_RS03310	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AM365_RS03315	COG1256	bacterial-type flagellum assembly
AM365_RS03320	COG1705	Flagellar rod assembly protein muramidase FlgJ
AM365_RS03320	COG3951	Flagellar rod assembly protein muramidase FlgJ
AM365_RS03335	COG4786	Flagellar basal body rod
AM365_RS03340	COG4787	bacterial-type flagellum-dependent cell motility
AM365_RS03350	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AM365_RS03355	COG1558	bacterial-type flagellum-dependent cell motility
AM365_RS03360	COG1815	bacterial-type flagellum-dependent cell motility
AM365_RS03365	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AM365_RS03370	COG2747	anti-sigma28 factor FlgM
AM365_RS03375	COG3418	PFAM FlgN family protein
AM365_RS03380	COG0728	peptidoglycan biosynthetic process
AM365_RS03385	COG0673	inositol 2-dehydrogenase activity
AM365_RS03395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM365_RS03405	COG2999	glutathione oxidoreductase activity
AM365_RS03440	COG3038	cytochrome b561
AM365_RS03445	COG2353	YceI-like domain
AM365_RS03455	COG1560	Kdo2-lipid A biosynthetic process
AM365_RS03470	COG5645	(Lipo)protein
AM365_RS03475	COG2943	transferase activity, transferring hexosyl groups
AM365_RS03500	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM365_RS03505	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AM365_RS03540	COG2197	response regulator
AM365_RS03555	COG1462	curli production assembly transport component CsgG
AM365_RS03565	COG3381	protein complex oligomerization
AM365_RS03605	COG3706	GGDEF domain
AM365_RS03610	COG0457	Tetratricopeptide repeat
AM365_RS03615	COG1649	PFAM Uncharacterised BCR, COG1649
AM365_RS03615	COG0726	polysaccharide deacetylase
AM365_RS03620	COG1215	transferase activity, transferring glycosyl groups
AM365_RS03625	COG3658	cytochrome
AM365_RS03630	COG1702	phosphate starvation-inducible protein PhoH
AM365_RS03640	COG2837	iron assimilation
AM365_RS03645	COG2822	iron ion transport
AM365_RS03665	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM365_RS03680	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM365_RS03680	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM365_RS03680	COG0506	proline dehydrogenase activity
AM365_RS03685	COG1309	transcriptional regulator
AM365_RS03720	COG2233	PERMEase
AM365_RS03725	COG3729	General stress protein
AM365_RS03770	COG0243	molybdopterin cofactor binding
AM365_RS03775	COG3005	denitrification pathway
AM365_RS03780	COG0745	RESPONSE REGULATOR receiver
AM365_RS03785	COG1879	ABC-type sugar transport system periplasmic component
AM365_RS03790	COG2198	Histidine kinase
AM365_RS03790	COG0784	Response regulator, receiver
AM365_RS03790	COG2205	protein histidine kinase activity
AM365_RS03795	COG0348	domain, Protein
AM365_RS03815	COG1278	Cold shock
AM365_RS03820	COG1278	Cold shock
AM365_RS03840	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM365_RS03845	COG1596	polysaccharide export
AM365_RS03850	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AM365_RS03855	COG3206	protein involved in exopolysaccharide biosynthesis
AM365_RS03855	COG0489	protein tyrosine kinase activity
AM365_RS03870	COG1294	oxidase, subunit
AM365_RS03875	COG1271	oxidase subunit
AM365_RS03880	COG1773	rubredoxin
AM365_RS03885	COG1999	signal sequence binding
AM365_RS03890	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM365_RS03895	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
AM365_RS03900	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AM365_RS03905	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AM365_RS03915	COG0670	Belongs to the BI1 family
AM365_RS03920	COG2920	part of a sulfur-relay system
AM365_RS03925	COG1254	Belongs to the acylphosphatase family
AM365_RS03940	COG1832	CoA-binding protein
AM365_RS03955	COG0210	DNA helicase
AM365_RS03960	COG3304	Inner membrane component domain
AM365_RS03965	COG1289	transmembrane transporter activity
AM365_RS03970	COG3070	regulator of competence-specific genes
AM365_RS03985	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM365_RS03985	COG2885	chlorophyll binding
AM365_RS03995	COG1067	ATP-dependent peptidase activity
AM365_RS04005	COG3130	regulation of translation
AM365_RS04010	COG3009	Protein conserved in bacteria
AM365_RS04015	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM365_RS04015	COG3008	intermembrane lipid transfer
AM365_RS04020	COG2995	paraquat-inducible protein a
AM365_RS04025	COG0488	(ABC) transporter
AM365_RS04035	COG3217	Mosc domain protein beta barrel domain protein
AM365_RS04035	COG0633	Ferredoxin
AM365_RS04050	COG3121	Chaperone
AM365_RS04055	COG3539	Fimbrial protein
AM365_RS04060	COG3539	Fimbrial protein
AM365_RS04065	COG3539	Fimbrial protein
AM365_RS04070	COG3188	usher protein
AM365_RS04075	COG3121	Chaperone
AM365_RS04080	COG3539	Fimbrial protein
AM365_RS04090	COG0431	NADPH-dependent FMN reductase
AM365_RS04095	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM365_RS04105	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM365_RS04115	COG0308	aminopeptidase N
AM365_RS04140	COG1448	Aminotransferase
AM365_RS04150	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS04155	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM365_RS04160	COG3108	Peptidase M15
AM365_RS04170	COG2989	Protein conserved in bacteria
AM365_RS04180	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AM365_RS04190	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM365_RS04195	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM365_RS04200	COG3173	Aminoglycoside phosphotransferase
AM365_RS04215	COG3214	Protein conserved in bacteria
AM365_RS04225	COG1132	(ABC) transporter
AM365_RS04230	COG2333	competence protein COMEC
AM365_RS04230	COG0658	competence protein
AM365_RS04240	COG0539	negative regulation of cytoplasmic translation
AM365_RS04250	COG0501	Belongs to the peptidase M48B family
AM365_RS04265	COG2323	membrane
AM365_RS04270	COG1944	ATP diphosphatase activity
AM365_RS04275	COG2116	formate transmembrane transporter activity
AM365_RS04280	COG1882	Formate acetyltransferase
AM365_RS04285	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM365_RS04290	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM365_RS04295	COG0583	DNA-binding transcription factor activity
AM365_RS04300	COG0531	amino acid
AM365_RS04310	COG1335	isochorismatase
AM365_RS04315	COG3302	dmso reductase anchor subunit
AM365_RS04320	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS04325	COG0243	molybdopterin cofactor binding
AM365_RS04335	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AM365_RS04350	COG1522	sequence-specific DNA binding
AM365_RS04360	COG0492	ferredoxin-NADP+ reductase activity
AM365_RS04365	COG4988	ABC transporter
AM365_RS04370	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AM365_RS04395	COG0542	response to heat
AM365_RS04405	COG1278	Cold shock
AM365_RS04415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM365_RS04420	COG2990	Protein conserved in bacteria
AM365_RS04425	COG3593	DNA synthesis involved in DNA repair
AM365_RS04430	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AM365_RS04440	COG2431	L-lysine efflux transmembrane transporter activity
AM365_RS04450	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM365_RS04455	COG0028	Belongs to the TPP enzyme family
AM365_RS04460	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
AM365_RS04465	COG0702	epimerase
AM365_RS04470	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM365_RS04475	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM365_RS04490	COG1126	abc transporter atp-binding protein
AM365_RS04495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS04500	COG4215	(ABC) transporter
AM365_RS04505	COG4160	amino acid transport
AM365_RS04510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS04525	COG1177	transmembrane transport
AM365_RS04530	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM365_RS04535	COG3842	ATPase activity
AM365_RS04540	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM365_RS04560	COG0778	Nitroreductase
AM365_RS04570	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM365_RS04585	COG3226	Transcriptional regulator
AM365_RS04590	COG0738	Major facilitator superfamily
AM365_RS04595	COG0561	phosphatase activity
AM365_RS04605	COG2814	Major facilitator Superfamily
AM365_RS04610	COG0671	phosphoesterase, PA-phosphatase related
AM365_RS04615	COG1349	DNA-binding transcription factor activity
AM365_RS04620	COG1686	Belongs to the peptidase S11 family
AM365_RS04625	COG0625	glutathione transferase activity
AM365_RS04630	COG2133	pyrroloquinoline quinone binding
AM365_RS04645	COG2199	diguanylate cyclase activity
AM365_RS04650	COG2200	EAL domain
AM365_RS04675	COG1446	asparaginase
AM365_RS04680	COG0303	'Molybdopterin
AM365_RS04685	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM365_RS04690	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM365_RS04695	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM365_RS04700	COG1882	Formate acetyltransferase
AM365_RS04705	COG0561	phosphatase activity
AM365_RS04715	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS04725	COG0488	(ABC) transporter
AM365_RS04730	COG1376	ErfK ybiS ycfS ynhG family protein
AM365_RS04735	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM365_RS04740	COG1321	iron dependent repressor
AM365_RS04750	COG2194	sulfuric ester hydrolase activity
AM365_RS04755	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM365_RS04760	COG5006	permease, DMT superfamily
AM365_RS04785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS04790	COG0765	amino acid transport
AM365_RS04795	COG1126	abc transporter atp-binding protein
AM365_RS04800	COG0668	transmembrane transport
AM365_RS04815	COG4774	siderophore transport
AM365_RS04825	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM365_RS04835	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM365_RS04840	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM365_RS04845	COG1199	ATP-dependent helicase activity
AM365_RS04855	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
AM365_RS04860	COG0513	Belongs to the DEAD box helicase family
AM365_RS04865	COG1309	transcriptional regulator
AM365_RS04875	COG1131	(ABC) transporter
AM365_RS04880	COG0842	Transport permease protein
AM365_RS04885	COG0842	Transport permease protein
AM365_RS04895	COG3568	Endonuclease Exonuclease Phosphatase
AM365_RS04900	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM365_RS04905	COG0392	lysyltransferase activity
AM365_RS04910	COG0670	Belongs to the BI1 family
AM365_RS04920	COG0670	Belongs to the BI1 family
AM365_RS04925	COG0314	molybdopterin synthase activity
AM365_RS04930	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AM365_RS04940	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM365_RS04950	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AM365_RS04960	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM365_RS04965	COG2226	methyltransferase
AM365_RS04980	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM365_RS04985	COG1881	PFAM PEBP family protein
AM365_RS04995	COG4677	pectinesterase activity
AM365_RS05000	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM365_RS05005	COG0471	metal ion transport
AM365_RS05010	COG2828	Protein conserved in bacteria
AM365_RS05015	COG0583	DNA-binding transcription factor activity
AM365_RS05025	COG0561	phosphatase activity
AM365_RS05035	COG4149	molybdate abc transporter
AM365_RS05040	COG0725	ABC transporter, periplasmic molybdate-binding protein
AM365_RS05055	COG2005	Transcriptional regulator
AM365_RS05055	COG3585	molybdate ion transport
AM365_RS05060	COG1119	ATPase activity
AM365_RS05065	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AM365_RS05070	COG1085	galactose-1-phosphate uridylyltransferase
AM365_RS05080	COG2017	converts alpha-aldose to the beta-anomer
AM365_RS05090	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM365_RS05105	COG1230	cation diffusion facilitator family transporter
AM365_RS05110	COG3201	nicotinamide mononucleotide transporter
AM365_RS05160	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AM365_RS05165	COG2885	chlorophyll binding
AM365_RS05175	COG3064	Membrane
AM365_RS05180	COG0848	biopolymer transport protein
AM365_RS05185	COG0811	peptide transport
AM365_RS05190	COG0824	Thioesterase
AM365_RS05195	COG3790	cyd operon protein YbgE
AM365_RS05200	COG4890	Cyd operon protein YbgT
AM365_RS05205	COG1294	oxidase, subunit
AM365_RS05210	COG1271	oxidase subunit
AM365_RS05220	COG0383	alpha-mannosidase activity
AM365_RS05225	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS05225	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS05225	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS05230	COG2188	Transcriptional regulator
AM365_RS05235	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM365_RS05245	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM365_RS05250	COG0567	Dehydrogenase, E1 component
AM365_RS05255	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM365_RS05260	COG1053	succinate dehydrogenase
AM365_RS05265	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AM365_RS05270	COG2009	succinate dehydrogenase
AM365_RS05285	COG0372	Belongs to the citrate synthase family
AM365_RS05290	COG3539	Fimbrial protein
AM365_RS05295	COG3188	usher protein
AM365_RS05300	COG3121	Chaperone
AM365_RS05305	COG3539	Fimbrial protein
AM365_RS05310	COG3180	Ammonia monooxygenase
AM365_RS05325	COG1984	allophanate hydrolase subunit 2
AM365_RS05330	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AM365_RS05335	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AM365_RS05345	COG0415	Belongs to the DNA photolyase family
AM365_RS05355	COG5433	transposase activity
AM365_RS05365	COG3209	COG3209 Rhs family protein
AM365_RS05375	COG3209	COG3209 Rhs family protein
AM365_RS05405	COG2205	protein histidine kinase activity
AM365_RS05410	COG0745	RESPONSE REGULATOR receiver
AM365_RS05420	COG1982	Orn Lys Arg decarboxylase major
AM365_RS05425	COG0531	amino acid
AM365_RS05430	COG0033	Phosphoglucomutase
AM365_RS05435	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AM365_RS05440	COG0596	Alpha beta hydrolase
AM365_RS05450	COG0716	FMN binding
AM365_RS05460	COG0735	belongs to the Fur family
AM365_RS05485	COG2190	(PTS) system
AM365_RS05485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS05485	COG1263	PTS System
AM365_RS05495	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM365_RS05500	COG1940	carbohydrate kinase activity
AM365_RS05500	COG1846	Transcriptional regulator
AM365_RS05505	COG0647	UMP catabolic process
AM365_RS05515	COG0367	asparagine synthase
AM365_RS05560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM365_RS05570	COG1702	phosphate starvation-inducible protein PhoH
AM365_RS05580	COG4535	Mg2 and Co2 transporter CorC
AM365_RS05585	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AM365_RS05600	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS05605	COG0765	amino acid transport
AM365_RS05610	COG0765	amino acid transport
AM365_RS05615	COG1126	abc transporter atp-binding protein
AM365_RS05625	COG0443	Heat shock 70 kDa protein
AM365_RS05630	COG2214	Heat shock protein DnaJ domain protein
AM365_RS05640	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM365_RS05645	COG2214	Heat shock protein DnaJ domain protein
AM365_RS05655	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM365_RS05660	COG2888	peptidyl-tyrosine sulfation
AM365_RS05675	COG1466	dna polymerase III delta subunit
AM365_RS05685	COG0406	alpha-ribazole phosphatase activity
AM365_RS05690	COG0799	negative regulation of ribosome biogenesis
AM365_RS05700	COG0768	penicillin binding
AM365_RS05705	COG0772	Belongs to the SEDS family
AM365_RS05710	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM365_RS05715	COG1686	Belongs to the peptidase S11 family
AM365_RS05735	COG0583	DNA-binding transcription factor activity
AM365_RS05750	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AM365_RS05755	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM365_RS05780	COG3069	C4-dicarboxylate transmembrane transporter activity
AM365_RS05785	COG4565	transcriptional regulatory protein
AM365_RS05790	COG3290	protein histidine kinase activity
AM365_RS05795	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AM365_RS05805	COG2301	Belongs to the HpcH HpaI aldolase family
AM365_RS05810	COG3051	citrate lyase alpha subunit
AM365_RS05825	COG0471	metal ion transport
AM365_RS05830	COG3719	Belongs to the RNase T2 family
AM365_RS05840	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM365_RS05850	COG1063	alcohol dehydrogenase
AM365_RS05855	COG0589	response to stress
AM365_RS05860	COG3634	alkyl hydroperoxide reductase activity
AM365_RS05865	COG0450	alkyl hydroperoxide reductase
AM365_RS05870	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM365_RS05875	COG0583	DNA-binding transcription factor activity
AM365_RS05880	COG3969	phosphoadenosine phosphosulfate
AM365_RS05885	COG1475	DNA binding
AM365_RS05890	COG0436	Aminotransferase
AM365_RS05895	COG0371	Dehydrogenase
AM365_RS05900	COG2879	small protein
AM365_RS05905	COG1966	Carbon starvation protein
AM365_RS05910	COG2050	protein possibly involved in aromatic compounds catabolism
AM365_RS05915	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS05920	COG3433	isochorismatase activity
AM365_RS05920	COG1535	isochorismatase
AM365_RS05925	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM365_RS05930	COG1169	isochorismate synthase
AM365_RS05935	COG4592	Periplasmic binding protein
AM365_RS05945	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM365_RS05950	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM365_RS05955	COG1120	ATPase activity
AM365_RS05960	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
AM365_RS05965	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AM365_RS05965	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM365_RS05970	COG3251	PFAM MbtH domain protein
AM365_RS05975	COG2382	esterase
AM365_RS05985	COG4771	TonB-dependent receptor
AM365_RS05990	COG2977	Belongs to the P-Pant transferase superfamily
AM365_RS06025	COG2315	Protein conserved in bacteria
AM365_RS06035	COG0668	transmembrane transport
AM365_RS06040	COG1113	amino acid transport
AM365_RS06045	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM365_RS06050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM365_RS06055	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM365_RS06060	COG1538	Outer membrane efflux protein
AM365_RS06070	COG0745	RESPONSE REGULATOR receiver
AM365_RS06075	COG5002	protein histidine kinase activity
AM365_RS06130	COG0582	viral genome integration into host DNA
AM365_RS06140	COG2197	response regulator
AM365_RS06145	COG3539	Fimbrial protein
AM365_RS06150	COG3539	Fimbrial protein
AM365_RS06155	COG3188	usher protein
AM365_RS06160	COG3121	Chaperone
AM365_RS06165	COG3539	Fimbrial protein
AM365_RS06175	COG2501	S4 domain
AM365_RS06180	COG1988	membrane-bound metal-dependent
AM365_RS06190	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM365_RS06205	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AM365_RS06210	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AM365_RS06215	COG0549	Belongs to the carbamate kinase family
AM365_RS06225	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM365_RS06230	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM365_RS06235	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM365_RS06240	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AM365_RS06245	COG3257	ureidoglycine aminohydrolase activity
AM365_RS06250	COG1929	Belongs to the glycerate kinase type-1 family
AM365_RS06255	COG2233	PERMEase
AM365_RS06265	COG1953	Uracil, thiamine, allantoin
AM365_RS06270	COG2084	Dehydrogenase
AM365_RS06275	COG3622	Belongs to the hyi family
AM365_RS06280	COG3960	tartronate-semialdehyde synthase activity
AM365_RS06285	COG1414	Transcriptional regulator
AM365_RS06295	COG0583	DNA-binding transcription factor activity
AM365_RS06305	COG2801	Transposase and inactivated derivatives
AM365_RS06315	COG3209	COG3209 Rhs family protein
AM365_RS06325	COG3209	COG3209 Rhs family protein
AM365_RS06330	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AM365_RS06335	COG4181	ATPase activity
AM365_RS06340	COG2755	lipolytic protein G-D-S-L family
AM365_RS06345	COG0300	oxidoreductase activity
AM365_RS06350	COG3118	belongs to the thioredoxin family
AM365_RS06355	COG0390	transport system, permease component
AM365_RS06360	COG4619	ABC transporter
AM365_RS06365	COG0330	HflC and HflK could
AM365_RS06370	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM365_RS06375	COG0789	Transcriptional regulator
AM365_RS06385	COG0531	amino acid
AM365_RS06390	COG2066	Belongs to the glutaminase family
AM365_RS06395	COG2217	Heavy metal translocating P-type atpase
AM365_RS06400	COG3093	addiction module antidote protein HigA
AM365_RS06405	COG3735	TraB family
AM365_RS06415	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM365_RS06420	COG0737	Belongs to the 5'-nucleotidase family
AM365_RS06430	COG2223	nitrite transmembrane transporter activity
AM365_RS06435	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM365_RS06435	COG4651	solute:proton antiporter activity
AM365_RS06440	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM365_RS06480	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AM365_RS06495	COG2832	Protein of unknown function (DUF454)
AM365_RS06500	COG3923	Primosomal replication protein n
AM365_RS06510	COG3264	Mechanosensitive ion channel
AM365_RS06510	COG1196	nuclear chromosome segregation
AM365_RS06520	COG1309	transcriptional regulator
AM365_RS06525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM365_RS06530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM365_RS06545	COG0110	maltose O-acetyltransferase activity
AM365_RS06555	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM365_RS06560	COG5507	3-demethylubiquinone-9 3-methyltransferase
AM365_RS06570	COG3695	enzyme binding
AM365_RS06575	COG3126	Type III secretion system lipoprotein chaperone (YscW)
AM365_RS06580	COG1946	Acyl-CoA thioesterase
AM365_RS06585	COG0004	ammonium transporteR
AM365_RS06590	COG0347	Belongs to the P(II) protein family
AM365_RS06595	COG1132	(ABC) transporter
AM365_RS06600	COG1132	(ABC) transporter
AM365_RS06605	COG1522	sequence-specific DNA binding
AM365_RS06615	COG4533	DNA binding
AM365_RS06625	COG0824	Thioesterase
AM365_RS06630	COG1555	photosystem II stabilization
AM365_RS06635	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM365_RS06640	COG0776	regulation of translation
AM365_RS06645	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AM365_RS06670	COG0271	Belongs to the BolA IbaG family
AM365_RS06680	COG3056	Lipoprotein
AM365_RS06685	COG2223	nitrite transmembrane transporter activity
AM365_RS06690	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AM365_RS06695	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AM365_RS06700	COG1845	cytochrome c oxidase, subunit III
AM365_RS06705	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AM365_RS06730	COG2814	Major facilitator Superfamily
AM365_RS06740	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AM365_RS06745	COG0693	protein deglycase activity
AM365_RS06760	COG0142	geranyltranstransferase activity
AM365_RS06770	COG0667	Aldo Keto reductase
AM365_RS06775	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AM365_RS06780	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AM365_RS06795	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM365_RS06795	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM365_RS06805	COG4238	major outer membrane lipoprotein
AM365_RS06810	COG3248	Nucleoside-binding outer membrane protein
AM365_RS06815	COG1403	HNH endonuclease
AM365_RS06820	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM365_RS06825	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM365_RS06830	COG1862	Preprotein translocase
AM365_RS06850	COG0366	Alpha amylase catalytic
AM365_RS06855	COG1113	amino acid transport
AM365_RS06860	COG1114	Component of the transport system for branched-chain amino acids
AM365_RS06865	COG5002	protein histidine kinase activity
AM365_RS06870	COG0745	RESPONSE REGULATOR receiver
AM365_RS06875	COG0420	3'-5' exonuclease activity
AM365_RS06880	COG0419	ATPase involved in DNA repair
AM365_RS06885	COG2814	Major facilitator Superfamily
AM365_RS06890	COG1940	carbohydrate kinase activity
AM365_RS06915	COG4126	flavin adenine dinucleotide binding
AM365_RS06940	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AM365_RS06945	COG3706	GGDEF domain
AM365_RS06955	COG1785	Belongs to the alkaline phosphatase family
AM365_RS06970	COG1181	Belongs to the D-alanine--D-alanine ligase family
AM365_RS06990	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AM365_RS07000	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM365_RS07005	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM365_RS07010	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS07020	COG0113	porphobilinogen synthase activity
AM365_RS07025	COG2175	clavaminate synthase activity
AM365_RS07030	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM365_RS07040	COG4521	taurine ABC transporter
AM365_RS07050	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AM365_RS07055	COG1215	transferase activity, transferring glycosyl groups
AM365_RS07090	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS07100	COG3122	Protein conserved in bacteria
AM365_RS07105	COG2814	Major facilitator Superfamily
AM365_RS07140	COG1414	Transcriptional regulator
AM365_RS07145	COG1609	Transcriptional regulator
AM365_RS07160	COG2223	nitrite transmembrane transporter activity
AM365_RS07165	COG0110	maltose O-acetyltransferase activity
AM365_RS07170	COG2807	transmembrane transport
AM365_RS07180	COG0288	reversible hydration of carbon dioxide
AM365_RS07185	COG0583	DNA-binding transcription factor activity
AM365_RS07190	COG0402	S-adenosylhomocysteine deaminase activity
AM365_RS07195	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM365_RS07200	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AM365_RS07205	COG2079	MmgE PrpD family protein
AM365_RS07210	COG0372	Belongs to the citrate synthase family
AM365_RS07215	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AM365_RS07220	COG3829	transcription factor binding
AM365_RS07230	COG1280	lysine exporter protein (LysE YggA)
AM365_RS07245	COG1064	alcohol dehydrogenase
AM365_RS07255	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM365_RS07260	COG1129	ABC transporter
AM365_RS07265	COG1879	ABC-type sugar transport system periplasmic component
AM365_RS07275	COG0402	S-adenosylhomocysteine deaminase activity
AM365_RS07280	COG0549	Belongs to the carbamate kinase family
AM365_RS07285	COG1304	FMN binding
AM365_RS07290	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM365_RS07300	COG0666	response to abiotic stimulus
AM365_RS07315	COG0583	DNA-binding transcription factor activity
AM365_RS07320	COG2771	luxR family
AM365_RS07320	COG2200	EAL domain
AM365_RS07330	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM365_RS07355	COG0582	viral genome integration into host DNA
AM365_RS07360	COG2771	luxR family
AM365_RS07360	COG2200	EAL domain
AM365_RS07370	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS07390	COG1556	Lactate utilization protein
AM365_RS07395	COG1139	Iron-sulfur cluster binding protein
AM365_RS07400	COG0247	lactate metabolic process
AM365_RS07405	COG2207	Transcriptional regulator
AM365_RS07410	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM365_RS07420	COG3059	membrane
AM365_RS07425	COG0656	L-ascorbic acid biosynthetic process
AM365_RS07435	COG1388	LysM domain
AM365_RS07490	COG3188	usher protein
AM365_RS07500	COG3121	Chaperone
AM365_RS07505	COG0727	PFAM Uncharacterised protein family (UPF0153)
AM365_RS07515	COG3477	response to acidic pH
AM365_RS07525	COG2080	2 iron, 2 sulfur cluster binding
AM365_RS07535	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AM365_RS07540	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AM365_RS07545	COG0583	DNA-binding transcription factor activity
AM365_RS07580	COG2135	peptidase activity
AM365_RS07600	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM365_RS07615	COG4386	tail sheath protein
AM365_RS07625	COG1802	Transcriptional regulator
AM365_RS07625	COG4626	Terminase
AM365_RS07670	COG0582	viral genome integration into host DNA
AM365_RS07780	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM365_RS07800	COG2195	Cleaves the N-terminal amino acid of tripeptides
AM365_RS07805	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM365_RS07810	COG1690	Belongs to the RtcB family
AM365_RS07820	COG0454	-acetyltransferase
AM365_RS07835	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AM365_RS07840	COG1191	sigma factor activity
AM365_RS07865	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AM365_RS07875	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AM365_RS07890	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AM365_RS07915	COG4786	Flagellar basal body rod
AM365_RS07920	COG4787	bacterial-type flagellum-dependent cell motility
AM365_RS07925	COG1749	Flagellar hook protein flgE
AM365_RS07935	COG1558	bacterial-type flagellum-dependent cell motility
AM365_RS07940	COG1815	bacterial-type flagellum-dependent cell motility
AM365_RS07970	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AM365_RS07990	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM365_RS08000	COG1677	Flagellar hook-basal body complex protein FliE
AM365_RS08050	COG0791	NLP P60 protein
AM365_RS08055	COG3077	Addiction module antitoxin, RelB DinJ family
AM365_RS08060	COG3041	Addiction module toxin RelE StbE family
AM365_RS08065	COG3034	peptidoglycan biosynthetic process
AM365_RS08070	COG0121	glutamine amidotransferase
AM365_RS08080	COG1960	acyl-CoA dehydrogenase activity
AM365_RS08090	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM365_RS08150	COG3157	Type VI secretion system effector, Hcp
AM365_RS08155	COG4104	PAAR repeat-containing protein
AM365_RS08175	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM365_RS08185	COG2226	methyltransferase
AM365_RS08195	COG0741	lytic transglycosylase activity
AM365_RS08195	COG1388	LysM domain
AM365_RS08200	COG2226	methyltransferase
AM365_RS08210	COG0583	DNA-binding transcription factor activity
AM365_RS08215	COG0656	L-ascorbic acid biosynthetic process
AM365_RS08255	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM365_RS08260	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AM365_RS08265	COG2011	ABC-type metal ion transport system permease component
AM365_RS08270	COG1464	Belongs to the NlpA lipoprotein family
AM365_RS08280	COG1720	tRNA m6t6A37 methyltransferase activity
AM365_RS08295	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS08305	COG3015	lipoprotein NlpE involved in copper resistance
AM365_RS08310	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM365_RS08315	COG4681	YaeQ
AM365_RS08325	COG4568	rho-dependent transcription termination
AM365_RS08335	COG0346	lactoylglutathione lyase activity
AM365_RS08340	COG1982	Orn Lys Arg decarboxylase major
AM365_RS08350	COG0587	DNA-directed DNA polymerase activity
AM365_RS08375	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AM365_RS08380	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
AM365_RS08390	COG0750	zinc metalloprotease
AM365_RS08395	COG0575	Belongs to the CDS family
AM365_RS08400	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AM365_RS08405	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AM365_RS08440	COG0024	Methionine aminopeptidase
AM365_RS08460	COG3835	regulator
AM365_RS08465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM365_RS08485	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM365_RS08490	COG2860	membrane
AM365_RS08510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM365_RS08515	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM365_RS08520	COG1120	ATPase activity
AM365_RS08525	COG4774	siderophore transport
AM365_RS08530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM365_RS08540	COG1643	Atp-dependent helicase
AM365_RS08545	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AM365_RS08555	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM365_RS08565	COG0617	tRNA 3'-terminal CCA addition
AM365_RS08570	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AM365_RS08575	COG3539	Fimbrial protein
AM365_RS08580	COG3121	Chaperone
AM365_RS08585	COG3188	usher protein
AM365_RS08590	COG3539	Fimbrial protein
AM365_RS08595	COG3539	Fimbrial protein
AM365_RS08600	COG3539	Fimbrial protein
AM365_RS08605	COG3539	Fimbrial protein
AM365_RS08620	COG5464	transposase or invertase
AM365_RS08640	COG0726	polysaccharide deacetylase
AM365_RS08645	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS08650	COG0842	Transport permease protein
AM365_RS08655	COG1131	(ABC) transporter
AM365_RS08660	COG0288	reversible hydration of carbon dioxide
AM365_RS08665	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AM365_RS08670	COG4993	Dehydrogenase
AM365_RS08675	COG2132	Multicopper oxidase
AM365_RS08700	COG1049	propionate catabolic process, 2-methylcitrate cycle
AM365_RS08710	COG3064	Membrane
AM365_RS08715	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM365_RS08720	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM365_RS08725	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AM365_RS08735	COG2186	Transcriptional regulator
AM365_RS08740	COG1113	amino acid transport
AM365_RS08745	COG3725	Membrane protein required for beta-lactamase induction
AM365_RS08750	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM365_RS08755	COG0157	Belongs to the NadC ModD family
AM365_RS08765	COG4969	Belongs to the N-Me-Phe pilin family
AM365_RS08770	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM365_RS08775	COG1459	type II secretion system
AM365_RS08785	COG0237	dephospho-CoA kinase activity
AM365_RS08800	COG0494	nUDIX hydrolase
AM365_RS08820	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AM365_RS08825	COG0849	cell division
AM365_RS08830	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AM365_RS08835	COG1181	Belongs to the D-alanine--D-alanine ligase family
AM365_RS08850	COG0772	Belongs to the SEDS family
AM365_RS08865	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AM365_RS08870	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AM365_RS08875	COG0768	penicillin binding
AM365_RS08880	COG3116	cell division
AM365_RS08900	COG1609	Transcriptional regulator
AM365_RS08910	COG0440	acetolactate synthase activity
AM365_RS08915	COG0028	Belongs to the TPP enzyme family
AM365_RS08920	COG0583	DNA-binding transcription factor activity
AM365_RS08935	COG0473	3-isopropylmalate dehydrogenase activity
AM365_RS08950	COG2814	Major facilitator Superfamily
AM365_RS08965	COG4143	(ABC) transporter
AM365_RS08970	COG1178	ABC-type Fe3 transport system permease component
AM365_RS08980	COG0586	Pfam SNARE associated Golgi protein
AM365_RS08985	COG4977	sequence-specific DNA binding
AM365_RS09005	COG0235	Class ii aldolase
AM365_RS09010	COG0417	DNA replication proofreading
AM365_RS09020	COG0564	pseudouridine synthase activity
AM365_RS09025	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AM365_RS09030	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM365_RS09035	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM365_RS09060	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AM365_RS09075	COG2271	Major facilitator Superfamily
AM365_RS09085	COG0644	oxidoreductase
AM365_RS09140	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AM365_RS09145	COG0505	Belongs to the CarA family
AM365_RS09170	COG1047	Peptidyl-prolyl cis-trans
AM365_RS09185	COG0196	riboflavin kinase activity
AM365_RS09205	COG3188	usher protein
AM365_RS09220	COG0583	DNA-binding transcription factor activity
AM365_RS09250	COG4735	regulation of single-species biofilm formation
AM365_RS09255	COG1584	GPR1 FUN34 yaaH family protein
AM365_RS09260	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM365_RS09270	COG1115	amino acid carrier protein
AM365_RS09285	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AM365_RS09295	COG0527	aspartate kinase activity
AM365_RS09295	COG0460	homoserine dehydrogenase
AM365_RS09305	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AM365_RS09315	COG0745	RESPONSE REGULATOR receiver
AM365_RS09320	COG4452	Inner membrane protein CreD
AM365_RS09325	COG2205	protein histidine kinase activity
AM365_RS09330	COG0745	RESPONSE REGULATOR receiver
AM365_RS09335	COG3045	CreA protein
AM365_RS09340	COG2207	Transcriptional regulator
AM365_RS09340	COG3708	Transcriptional regulator
AM365_RS09360	COG0741	lytic transglycosylase activity
AM365_RS09370	COG0488	(ABC) transporter
AM365_RS09375	COG3172	ATPase kinase involved in NAD metabolism
AM365_RS09375	COG1056	cytidyltransferase-related domain
AM365_RS09380	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AM365_RS09385	COG0560	Phosphoserine phosphatase
AM365_RS09390	COG3726	membrane protein affecting hemolysin expression
AM365_RS09420	COG1328	CTP reductase activity
AM365_RS09425	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM365_RS09430	COG0084	hydrolase, TatD family'
AM365_RS09435	COG4667	esterase of the alpha-beta hydrolase superfamily
AM365_RS09445	COG2823	Periplasmic or secreted lipoprotein
AM365_RS09455	COG1011	Hydrolase
AM365_RS09460	COG0456	acetyltransferase
AM365_RS09465	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
AM365_RS09495	COG4114	ferric iron reductase
AM365_RS09500	COG2197	response regulator
AM365_RS09505	COG2197	response regulator
AM365_RS09510	COG2966	Psort location CytoplasmicMembrane, score
AM365_RS09525	COG1484	DNA-dependent DNA replication
AM365_RS09540	COG1063	alcohol dehydrogenase
AM365_RS09545	COG1802	Transcriptional regulator
AM365_RS09550	COG2271	Major facilitator Superfamily
AM365_RS09555	COG0840	transmembrane signaling receptor activity
AM365_RS09560	COG1846	Transcriptional regulator
AM365_RS09565	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM365_RS09570	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS09575	COG3384	dioxygenase
AM365_RS09585	COG3971	2-oxopent-4-enoate hydratase activity
AM365_RS09605	COG2368	4-hydroxyphenylacetate
AM365_RS09610	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM365_RS09620	COG1966	Carbon starvation protein
AM365_RS09625	COG2879	small protein
AM365_RS09630	COG0523	cobalamin synthesis protein
AM365_RS09655	COG0732	type I restriction modification DNA specificity domain
AM365_RS09800	COG1660	Displays ATPase and GTPase activities
AM365_RS09810	COG2801	Transposase and inactivated derivatives
AM365_RS09830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM365_RS09845	COG2814	Major facilitator Superfamily
AM365_RS09850	COG2733	membrane
AM365_RS09855	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AM365_RS09860	COG1924	4 iron, 4 sulfur cluster binding
AM365_RS09875	COG0477	Major facilitator Superfamily
AM365_RS09890	COG3366	ferrous iron transmembrane transporter activity
AM365_RS09895	COG0700	Nucleoside recognition
AM365_RS09900	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM365_RS09905	COG0583	DNA-binding transcription factor activity
AM365_RS09925	COG2186	Transcriptional regulator
AM365_RS09935	COG0246	Mannitol dehydrogenase
AM365_RS09950	COG2610	gluconate transmembrane transporter activity
AM365_RS09955	COG3539	Fimbrial protein
AM365_RS09960	COG3539	Fimbrial protein
AM365_RS09965	COG3539	Fimbrial protein
AM365_RS09970	COG3188	usher protein
AM365_RS09975	COG3121	Chaperone
AM365_RS09980	COG3539	Fimbrial protein
AM365_RS09985	COG3539	Fimbrial protein
AM365_RS10000	COG4974	Belongs to the 'phage' integrase family
AM365_RS10005	COG0582	viral genome integration into host DNA
AM365_RS10020	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM365_RS10045	COG1401	restriction endodeoxyribonuclease activity
AM365_RS10090	COG2815	serine threonine protein kinase
AM365_RS10090	COG0515	serine threonine protein kinase
AM365_RS10095	COG0582	viral genome integration into host DNA
AM365_RS10110	COG1064	alcohol dehydrogenase
AM365_RS10115	COG0433	COG0433 Predicted ATPase
AM365_RS10120	COG0795	lipopolysaccharide-transporting ATPase activity
AM365_RS10125	COG0795	lipopolysaccharide-transporting ATPase activity
AM365_RS10135	COG2927	DNA polymerase III (CHI subunit)
AM365_RS10140	COG0525	valine-tRNA ligase activity
AM365_RS10145	COG4269	membrane
AM365_RS10150	COG0456	acetyltransferase
AM365_RS10155	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
AM365_RS10175	COG2731	YhcH YjgK YiaL family protein
AM365_RS10180	COG1309	transcriptional regulator
AM365_RS10185	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS10190	COG0251	oxidation-reduction process
AM365_RS10215	COG0251	oxidation-reduction process
AM365_RS10220	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AM365_RS10225	COG1609	Transcriptional regulator
AM365_RS10230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS10230	COG1263	PTS System
AM365_RS10235	COG0366	Alpha amylase catalytic
AM365_RS10240	COG1328	CTP reductase activity
AM365_RS10245	COG0602	queuosine metabolic process
AM365_RS10250	COG3783	Cytochrome b(562)
AM365_RS10255	COG0312	modulator of DNA gyrase
AM365_RS10265	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AM365_RS10275	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM365_RS10280	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM365_RS10285	COG1129	ABC transporter
AM365_RS10290	COG1879	ABC-type sugar transport system periplasmic component
AM365_RS10295	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AM365_RS10300	COG2337	Toxic component of a toxin-antitoxin (TA) module
AM365_RS10305	COG2336	PFAM SpoVT AbrB
AM365_RS10310	COG2105	PFAM AIG2 family protein
AM365_RS10315	COG2911	Protein conserved in bacteria
AM365_RS10320	COG0729	surface antigen
AM365_RS10335	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS10345	COG1253	flavin adenine dinucleotide binding
AM365_RS10355	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM365_RS10360	COG1218	3'(2'),5'-bisphosphate nucleotidase
AM365_RS10365	COG0737	Belongs to the 5'-nucleotidase family
AM365_RS10370	COG1733	regulation of RNA biosynthetic process
AM365_RS10375	COG0702	epimerase
AM365_RS10380	COG0697	spore germination
AM365_RS10390	COG1113	amino acid transport
AM365_RS10395	COG0545	Peptidyl-prolyl cis-trans isomerase
AM365_RS10405	COG3061	Opacity-associated protein A
AM365_RS10410	COG1309	transcriptional regulator
AM365_RS10425	COG1024	Enoyl-CoA hydratase
AM365_RS10430	COG4670	ketone body catabolic process
AM365_RS10440	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AM365_RS10450	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AM365_RS10460	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AM365_RS10505	COG3037	sugar-specific permease SgaT UlaA
AM365_RS10520	COG1073	alpha beta
AM365_RS10525	COG3650	response to hydrogen peroxide
AM365_RS10540	COG1960	acyl-CoA dehydrogenase activity
AM365_RS10545	COG0754	glutathionylspermidine amidase activity
AM365_RS10550	COG5463	Belongs to the UPF0441 family
AM365_RS10555	COG3766	membrane
AM365_RS10565	COG1842	Phage shock protein A
AM365_RS10570	COG3789	protein conserved in bacteria
AM365_RS10575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM365_RS10580	COG0557	exoribonuclease II activity
AM365_RS10595	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AM365_RS10600	COG0330	HflC and HflK could
AM365_RS10605	COG0330	HflC and HflK could
AM365_RS10610	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AM365_RS10630	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM365_RS10635	COG0802	atpase or kinase
AM365_RS10640	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AM365_RS10640	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AM365_RS10645	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AM365_RS10680	COG3264	Mechanosensitive ion channel
AM365_RS10680	COG1511	domain protein
AM365_RS10695	COG0531	amino acid
AM365_RS10705	COG1053	succinate dehydrogenase
AM365_RS10710	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM365_RS10725	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM365_RS10730	COG3040	lipid binding
AM365_RS10735	COG2076	Multidrug Resistance protein
AM365_RS10740	COG5510	response to toxic substance
AM365_RS10745	COG5510	response to toxic substance
AM365_RS10755	COG1509	lysine 2,3-aminomutase activity
AM365_RS10780	COG0531	amino acid
AM365_RS10785	COG3030	protein affecting phage T7 exclusion by the F plasmid
AM365_RS10790	COG1027	Aspartate ammonia-lyase
AM365_RS10795	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM365_RS10810	COG1309	transcriptional regulator
AM365_RS10820	COG0582	viral genome integration into host DNA
AM365_RS10825	COG2194	sulfuric ester hydrolase activity
AM365_RS10865	COG1201	RNA secondary structure unwinding
AM365_RS10885	COG1475	DNA binding
AM365_RS10890	COG3969	phosphoadenosine phosphosulfate
AM365_RS10950	COG4869	propanediol catabolic process
AM365_RS10955	COG4820	ethanolamine utilization protein (EutJ)
AM365_RS10990	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS11000	COG0693	protein deglycase activity
AM365_RS11005	COG1882	Formate acetyltransferase
AM365_RS11010	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM365_RS11030	COG3344	reverse transcriptase
AM365_RS11040	COG2972	Histidine kinase
AM365_RS11045	COG2207	Transcriptional regulator
AM365_RS11050	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AM365_RS11205	COG3596	GTP binding
AM365_RS11210	COG2378	regulation of single-species biofilm formation
AM365_RS11235	COG2003	Belongs to the UPF0758 family
AM365_RS11285	COG0531	amino acid
AM365_RS11290	COG1982	Orn Lys Arg decarboxylase major
AM365_RS11295	COG3104	oligopeptide transport
AM365_RS11300	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AM365_RS11320	COG2388	GCN5-related N-acetyl-transferase
AM365_RS11325	COG3592	Divergent 4Fe-4S mono-cluster
AM365_RS11330	COG3290	protein histidine kinase activity
AM365_RS11335	COG4565	transcriptional regulatory protein
AM365_RS11345	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM365_RS11350	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM365_RS11350	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM365_RS11355	COG3647	Membrane
AM365_RS11360	COG2211	Major facilitator Superfamily
AM365_RS11365	COG1486	melibiose metabolic process
AM365_RS11375	COG2169	Transcriptional regulator
AM365_RS11380	COG1982	Orn Lys Arg decarboxylase major
AM365_RS11385	COG2207	Transcriptional regulator
AM365_RS11390	COG0531	amino acid
AM365_RS11395	COG2194	sulfuric ester hydrolase activity
AM365_RS11400	COG0745	RESPONSE REGULATOR receiver
AM365_RS11405	COG0642	Histidine kinase
AM365_RS11415	COG0477	Major facilitator Superfamily
AM365_RS11435	COG2824	Alkylphosphonate utilization operon protein PhnA
AM365_RS11440	COG2764	glyoxalase bleomycin resistance protein dioxygenase
AM365_RS11450	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AM365_RS11455	COG3639	organic phosphonate transmembrane transporter activity
AM365_RS11460	COG2188	Transcriptional regulator
AM365_RS11465	COG3624	Phosphonate C-P lyase system protein PhnG
AM365_RS11470	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AM365_RS11475	COG3626	phosphonate metabolism
AM365_RS11480	COG3627	carbon phosphorus lyase activity
AM365_RS11485	COG4107	phosphonate C-P lyase system protein PhnK
AM365_RS11490	COG4778	phosphonate C-P lyase system protein PhnL
AM365_RS11495	COG3454	Phosphonate metabolism
AM365_RS11500	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AM365_RS11505	COG0456	acetyltransferase
AM365_RS11510	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AM365_RS11520	COG0698	ribose 5-phosphate isomerase
AM365_RS11525	COG2015	COG2015, Alkyl sulfatase and related hydrolases
AM365_RS11535	COG1566	PFAM secretion protein HlyD family protein
AM365_RS11540	COG1289	transmembrane transporter activity
AM365_RS11555	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM365_RS11560	COG1301	dicarboxylic acid transport
AM365_RS11570	COG4235	cytochrome complex assembly
AM365_RS11575	COG3088	subunit of a heme lyase
AM365_RS11580	COG1138	Cytochrome C-type biogenesis protein
AM365_RS11585	COG3301	Polysulphide reductase, NrfD
AM365_RS11590	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS11595	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AM365_RS11610	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AM365_RS11615	COG3162	membrane
AM365_RS11625	COG1357	PFAM Pentapeptide repeats (8 copies)
AM365_RS11630	COG0025	NhaP-type Na H and K H
AM365_RS11635	COG2252	PERMEase
AM365_RS11655	COG0789	Transcriptional regulator
AM365_RS11660	COG2207	Transcriptional regulator
AM365_RS11665	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM365_RS11680	COG0629	single-stranded DNA binding
AM365_RS11685	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AM365_RS11690	COG2315	Protein conserved in bacteria
AM365_RS11695	COG0432	Pfam Uncharacterised protein family UPF0047
AM365_RS11700	COG3700	Belongs to the class B bacterial acid phosphatase family
AM365_RS11710	COG1448	Aminotransferase
AM365_RS11715	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM365_RS11720	COG0305	Participates in initiation and elongation during chromosome replication
AM365_RS11725	COG0604	alcohol dehydrogenase
AM365_RS11735	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM365_RS11745	COG0735	belongs to the Fur family
AM365_RS11750	COG3237	CsbD-like
AM365_RS11755	COG0534	Mate efflux family protein
AM365_RS11765	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AM365_RS11790	COG1357	PFAM Pentapeptide repeats (8 copies)
AM365_RS11810	COG3842	ATPase activity
AM365_RS11820	COG2182	Extracellular solute-binding protein
AM365_RS11825	COG1175	transmembrane transport
AM365_RS11830	COG3833	ABC-type maltose transport systems, permease component
AM365_RS11835	COG2814	Major facilitator Superfamily
AM365_RS11835	COG0477	Major facilitator Superfamily
AM365_RS11850	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM365_RS11885	COG0527	aspartate kinase activity
AM365_RS11890	COG0542	response to heat
AM365_RS11895	COG3541	Predicted nucleotidyltransferase
AM365_RS11910	COG1187	pseudouridine synthase activity
AM365_RS11920	COG1283	sodium-dependent phosphate transmembrane transporter activity
AM365_RS11925	COG0646	methionine synthase
AM365_RS11925	COG1410	methionine synthase
AM365_RS11930	COG1414	Transcriptional regulator
AM365_RS11945	COG2224	Isocitrate lyase
AM365_RS11950	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM365_RS11960	COG0456	acetyltransferase
AM365_RS11995	COG0151	Belongs to the GarS family
AM365_RS12000	COG2204	response regulator
AM365_RS12005	COG4191	Histidine kinase
AM365_RS12015	COG3678	ATP-independent chaperone mediated protein folding
AM365_RS12030	COG3068	Protein conserved in bacteria
AM365_RS12065	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM365_RS12070	COG2104	thiamine diphosphate biosynthetic process
AM365_RS12080	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AM365_RS12125	COG0250	Participates in transcription elongation, termination and antitermination
AM365_RS12130	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM365_RS12175	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AM365_RS12175	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AM365_RS12240	COG0583	DNA-binding transcription factor activity
AM365_RS12245	COG2271	Major facilitator Superfamily
AM365_RS12250	COG4948	Mandelate Racemase Muconate Lactonizing
AM365_RS12270	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AM365_RS12285	COG2194	sulfuric ester hydrolase activity
AM365_RS12290	COG2207	Transcriptional regulator
AM365_RS12295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS12300	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM365_RS12305	COG1882	Formate acetyltransferase
AM365_RS12310	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS12315	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS12320	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS12320	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM365_RS12320	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS12325	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM365_RS12330	COG0371	Dehydrogenase
AM365_RS12335	COG3738	Protein conserved in bacteria
AM365_RS12340	COG0697	spore germination
AM365_RS12350	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AM365_RS12355	COG0527	aspartate kinase activity
AM365_RS12355	COG0460	homoserine dehydrogenase
AM365_RS12360	COG0626	cystathionine gamma-synthase activity
AM365_RS12370	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
AM365_RS12390	COG3209	COG3209 Rhs family protein
AM365_RS12400	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AM365_RS12405	COG1609	Transcriptional regulator
AM365_RS12410	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM365_RS12425	COG1575	Belongs to the MenA family. Type 1 subfamily
AM365_RS12440	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AM365_RS12450	COG1494	fructose-1,6-bisphosphatase
AM365_RS12460	COG0589	response to stress
AM365_RS12465	COG3691	Protein conserved in bacteria
AM365_RS12470	COG3152	Membrane
AM365_RS12495	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AM365_RS12555	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM365_RS12645	COG4695	Portal protein
AM365_RS12665	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AM365_RS12715	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM365_RS12720	COG3678	ATP-independent chaperone mediated protein folding
AM365_RS12725	COG0745	RESPONSE REGULATOR receiver
AM365_RS12730	COG2205	protein histidine kinase activity
AM365_RS12740	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS12750	COG2258	MOSC domain
AM365_RS12765	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM365_RS12815	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS12820	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS12820	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS12825	COG1363	Peptidase, m42
AM365_RS12830	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS12830	COG3711	transcriptional antiterminator
AM365_RS12850	COG0243	molybdopterin cofactor binding
AM365_RS12850	COG3383	formate dehydrogenase (NAD+) activity
AM365_RS12855	COG3383	formate dehydrogenase (NAD+) activity
AM365_RS12855	COG0243	molybdopterin cofactor binding
AM365_RS12860	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS12865	COG2864	formate dehydrogenase
AM365_RS12875	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM365_RS12880	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM365_RS12895	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
AM365_RS12905	COG0456	acetyltransferase
AM365_RS12920	COG1011	Hydrolase
AM365_RS12930	COG0477	Major facilitator Superfamily
AM365_RS12940	COG1063	alcohol dehydrogenase
AM365_RS12945	COG3684	Belongs to the aldolase LacD family
AM365_RS12950	COG2084	Dehydrogenase
AM365_RS12955	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM365_RS12960	COG1349	DNA-binding transcription factor activity
AM365_RS12970	COG2271	Major facilitator Superfamily
AM365_RS12975	COG1082	Xylose isomerase domain protein TIM barrel
AM365_RS12980	COG2188	Transcriptional regulator
AM365_RS12985	COG1217	gtp-binding protein TYPA
AM365_RS12995	COG0174	glutamine synthetase
AM365_RS13005	COG3852	Histidine kinase
AM365_RS13010	COG2204	response regulator
AM365_RS13020	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM365_RS13035	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AM365_RS13035	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AM365_RS13045	COG0204	Acyl-transferase
AM365_RS13050	COG5339	Protein conserved in bacteria
AM365_RS13055	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM365_RS13060	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AM365_RS13065	COG3084	Protein conserved in bacteria
AM365_RS13070	COG0746	molybdenum cofactor guanylyltransferase activity
AM365_RS13075	COG1763	Mo-molybdopterin cofactor biosynthetic process
AM365_RS13105	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AM365_RS13110	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AM365_RS13115	COG1739	Uncharacterized protein family UPF0029
AM365_RS13135	COG0543	2 iron, 2 sulfur cluster binding
AM365_RS13140	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM365_RS13145	COG0250	Participates in transcription elongation, termination and antitermination
AM365_RS13155	COG0805	protein transport
AM365_RS13160	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AM365_RS13165	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AM365_RS13175	COG3165	ubiquinone biosynthetic process from chorismate
AM365_RS13185	COG1322	Protein conserved in bacteria
AM365_RS13190	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AM365_RS13195	COG0412	Dienelactone hydrolase
AM365_RS13205	COG0583	DNA-binding transcription factor activity
AM365_RS13210	COG0697	spore germination
AM365_RS13215	COG0561	phosphatase activity
AM365_RS13220	COG2267	carboxylic ester hydrolase activity
AM365_RS13225	COG1280	lysine exporter protein (LysE YggA)
AM365_RS13230	COG1280	lysine exporter protein (LysE YggA)
AM365_RS13235	COG0514	ATP-dependent DNA helicase (RecQ)
AM365_RS13240	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
AM365_RS13245	COG2050	protein possibly involved in aromatic compounds catabolism
AM365_RS13250	COG2962	Rard protein
AM365_RS13290	COG0598	Magnesium transport protein CorA
AM365_RS13295	COG3698	Phosphodiester glycosidase
AM365_RS13300	COG0210	DNA helicase
AM365_RS13305	COG1011	Hydrolase
AM365_RS13315	COG3159	Protein conserved in bacteria
AM365_RS13325	COG5567	small periplasmic lipoprotein
AM365_RS13340	COG3072	Adenylate cyclase
AM365_RS13355	COG1587	Uroporphyrinogen-III synthase
AM365_RS13360	COG2959	enzyme of heme biosynthesis
AM365_RS13365	COG3071	HemY protein
AM365_RS13370	COG0641	radical SAM
AM365_RS13395	COG1113	amino acid transport
AM365_RS13415	COG2244	polysaccharide biosynthetic process
AM365_RS13420	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AM365_RS13425	COG0456	acetyltransferase
AM365_RS13435	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AM365_RS13440	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AM365_RS13445	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
AM365_RS13450	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AM365_RS13460	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AM365_RS13470	COG3118	belongs to the thioredoxin family
AM365_RS13490	COG0210	DNA helicase
AM365_RS13495	COG3692	DNA binding
AM365_RS13500	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM365_RS13510	COG0583	DNA-binding transcription factor activity
AM365_RS13515	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM365_RS13525	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM365_RS13530	COG3978	acetolactate synthase activity
AM365_RS13545	COG0606	chelatase, subunit chli
AM365_RS13550	COG3085	chromosome segregation
AM365_RS13590	COG2186	Transcriptional regulator
AM365_RS13595	COG0477	Major facilitator Superfamily
AM365_RS13600	COG1609	Transcriptional regulator
AM365_RS13605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM365_RS13610	COG1879	ABC-type sugar transport system periplasmic component
AM365_RS13615	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM365_RS13620	COG1129	ABC transporter
AM365_RS13650	COG1522	sequence-specific DNA binding
AM365_RS13655	COG0716	FMN binding
AM365_RS13670	COG3312	ion transport
AM365_RS13725	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM365_RS13750	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM365_RS13755	COG0573	inorganic phosphate transmembrane transporter activity
AM365_RS13760	COG0581	inorganic phosphate transmembrane transporter activity
AM365_RS13765	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AM365_RS13770	COG0704	Plays a role in the regulation of phosphate uptake
AM365_RS13775	COG3711	transcriptional antiterminator
AM365_RS13780	COG2190	(PTS) system
AM365_RS13780	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS13780	COG1263	PTS System
AM365_RS13785	COG2723	6-phospho-beta-galactosidase activity
AM365_RS13795	COG2382	esterase
AM365_RS13800	COG0363	glucosamine-6-phosphate deaminase activity
AM365_RS13805	COG3196	Protein conserved in bacteria
AM365_RS13815	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM365_RS13820	COG2252	PERMEase
AM365_RS13825	COG0431	NADPH-dependent FMN reductase
AM365_RS13830	COG2091	lysine biosynthetic process via aminoadipic acid
AM365_RS13845	COG0814	amino acid
AM365_RS13895	COG0592	DNA-directed DNA polymerase activity
AM365_RS13905	COG0187	DNA topoisomerase II activity
AM365_RS13910	COG3753	Protein conserved in bacteria
AM365_RS13915	COG0561	phosphatase activity
AM365_RS13925	COG2186	Transcriptional regulator
AM365_RS13930	COG3734	2-keto-3-deoxy-galactonokinase
AM365_RS13935	COG0800	Aldolase
AM365_RS13945	COG2271	Major facilitator Superfamily
AM365_RS13955	COG0823	Involved in the tonB-independent uptake of proteins
AM365_RS13960	COG5645	(Lipo)protein
AM365_RS13980	COG2188	Transcriptional regulator
AM365_RS13995	COG2207	Transcriptional regulator
AM365_RS14000	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM365_RS14005	COG3119	arylsulfatase activity
AM365_RS14015	COG2149	membrane
AM365_RS14025	COG0641	radical SAM
AM365_RS14030	COG2814	Major facilitator Superfamily
AM365_RS14065	COG0028	Belongs to the TPP enzyme family
AM365_RS14070	COG0440	acetolactate synthase activity
AM365_RS14075	COG2197	response regulator
AM365_RS14080	COG3851	Histidine kinase
AM365_RS14085	COG2271	Major facilitator Superfamily
AM365_RS14090	COG2271	Major facilitator Superfamily
AM365_RS14100	COG2252	PERMEase
AM365_RS14130	COG1464	Belongs to the NlpA lipoprotein family
AM365_RS14135	COG0697	spore germination
AM365_RS14155	COG4372	Transposase
AM365_RS14160	COG3436	PFAM IS66 Orf2 family protein
AM365_RS14170	COG3039	Transposase
AM365_RS14250	COG0582	viral genome integration into host DNA
AM365_RS14260	COG2211	Major facilitator Superfamily
AM365_RS14270	COG2982	Protein involved in outer membrane biogenesis
AM365_RS14275	COG2233	PERMEase
AM365_RS14280	COG0786	glutamate:sodium symporter activity
AM365_RS14285	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AM365_RS14290	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM365_RS14295	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM365_RS14305	COG0194	GDP metabolic process
AM365_RS14315	COG2860	membrane
AM365_RS14325	COG1561	YicC-like family, N-terminal region
AM365_RS14355	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AM365_RS14385	COG1519	Transferase
AM365_RS14390	COG0859	PFAM glycosyl transferase family 9
AM365_RS14395	COG0438	transferase activity, transferring glycosyl groups
AM365_RS14400	COG0515	serine threonine protein kinase
AM365_RS14415	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AM365_RS14420	COG1442	glycosyl transferase family 8
AM365_RS14425	COG1216	Glycosyl transferase, family 2
AM365_RS14430	COG3307	-O-antigen
AM365_RS14435	COG0859	PFAM glycosyl transferase family 9
AM365_RS14440	COG0859	PFAM glycosyl transferase family 9
AM365_RS14450	COG0156	8-amino-7-oxononanoate synthase activity
AM365_RS14460	COG1216	Glycosyl transferase, family 2
AM365_RS14465	COG2861	carbohydrate metabolic process
AM365_RS14470	COG4942	peptidase
AM365_RS14485	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM365_RS14490	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM365_RS14505	COG1045	serine acetyltransferase
AM365_RS14510	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AM365_RS14520	COG2186	Transcriptional regulator
AM365_RS14525	COG1620	l-lactate permease
AM365_RS14535	COG5295	Hep Hag repeat protein
AM365_RS14560	COG3722	fumarate hydratase activity
AM365_RS14570	COG2213	PTS system mannitol-specific
AM365_RS14570	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS14580	COG1566	PFAM secretion protein HlyD family protein
AM365_RS14605	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM365_RS14610	COG3209	COG3209 Rhs family protein
AM365_RS14615	COG0625	glutathione transferase activity
AM365_RS14625	COG3276	selenocysteine insertion sequence binding
AM365_RS14630	COG1454	alcohol dehydrogenase
AM365_RS14635	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS14650	COG1566	PFAM secretion protein HlyD family protein
AM365_RS14655	COG0583	DNA-binding transcription factor activity
AM365_RS14660	COG3713	MltA-interacting MipA family protein
AM365_RS14665	COG0235	Class ii aldolase
AM365_RS14670	COG3623	hexulose-6-phosphate isomerase
AM365_RS14675	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AM365_RS14680	COG1070	Carbohydrate kinase
AM365_RS14685	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AM365_RS14690	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AM365_RS14695	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AM365_RS14700	COG2731	YhcH YjgK YiaL family protein
AM365_RS14710	COG1414	Transcriptional regulator
AM365_RS14715	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS14720	COG3977	Valine--pyruvate aminotransferase
AM365_RS14725	COG0366	Alpha amylase catalytic
AM365_RS14730	COG2992	FlgJ-related protein
AM365_RS14735	COG2207	Transcriptional regulator
AM365_RS14735	COG1609	Transcriptional regulator
AM365_RS14740	COG4214	carbohydrate transport
AM365_RS14745	COG1129	ABC transporter
AM365_RS14750	COG4213	ABC transporter substrate-binding protein
AM365_RS14760	COG1070	Carbohydrate kinase
AM365_RS14765	COG4682	membrane
AM365_RS14770	COG4682	membrane
AM365_RS14775	COG3274	enterobacterial common antigen metabolic process
AM365_RS14800	COG1278	Cold shock
AM365_RS14805	COG2944	sequence-specific DNA binding
AM365_RS14820	COG2885	chlorophyll binding
AM365_RS14825	COG0243	molybdopterin cofactor binding
AM365_RS14830	COG0456	acetyltransferase
AM365_RS14835	COG2818	Glycosylase
AM365_RS14840	COG5571	outer membrane autotransporter
AM365_RS14850	COG2223	nitrite transmembrane transporter activity
AM365_RS14880	COG2194	sulfuric ester hydrolase activity
AM365_RS14900	COG0747	negative chemotaxis
AM365_RS14910	COG0601	transmembrane transport
AM365_RS14915	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM365_RS14920	COG0444	Belongs to the ABC transporter superfamily
AM365_RS14925	COG4608	Belongs to the ABC transporter superfamily
AM365_RS14930	COG0814	amino acid
AM365_RS14970	COG2194	sulfuric ester hydrolase activity
AM365_RS14995	COG1215	transferase activity, transferring glycosyl groups
AM365_RS15000	COG1215	transferase activity, transferring glycosyl groups
AM365_RS15005	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AM365_RS15010	COG3118	belongs to the thioredoxin family
AM365_RS15010	COG0457	Tetratricopeptide repeat
AM365_RS15015	COG2199	diguanylate cyclase activity
AM365_RS15015	COG2200	EAL domain
AM365_RS15035	COG0612	Peptidase, M16
AM365_RS15050	COG2200	EAL domain
AM365_RS15055	COG2982	Protein involved in outer membrane biogenesis
AM365_RS15060	COG0477	Major facilitator Superfamily
AM365_RS15065	COG1295	ribonuclease BN
AM365_RS15070	COG0583	DNA-binding transcription factor activity
AM365_RS15075	COG2197	response regulator
AM365_RS15095	COG1858	cytochrome C peroxidase
AM365_RS15100	COG0076	glutamate decarboxylase activity
AM365_RS15110	COG2207	Transcriptional regulator
AM365_RS15120	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM365_RS15125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM365_RS15135	COG2771	luxR family
AM365_RS15140	COG3247	response to pH
AM365_RS15155	COG1285	pathogenesis
AM365_RS15160	COG2197	response regulator
AM365_RS15170	COG3065	identical protein binding
AM365_RS15190	COG1393	Belongs to the ArsC family
AM365_RS15195	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM365_RS15200	COG0640	Transcriptional regulator
AM365_RS15215	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM365_RS15220	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AM365_RS15225	COG0339	signal peptide processing
AM365_RS15235	COG3104	oligopeptide transport
AM365_RS15245	COG0589	response to stress
AM365_RS15255	COG0306	phosphate transporter
AM365_RS15260	COG2081	HI0933 family
AM365_RS15285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM365_RS15290	COG1129	ABC transporter
AM365_RS15290	COG0842	Transport permease protein
AM365_RS15295	COG0842	Transport permease protein
AM365_RS15320	COG0444	Belongs to the ABC transporter superfamily
AM365_RS15325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM365_RS15330	COG0601	transmembrane transport
AM365_RS15335	COG0747	negative chemotaxis
AM365_RS15340	COG2091	lysine biosynthetic process via aminoadipic acid
AM365_RS15345	COG0628	permease
AM365_RS15360	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AM365_RS15375	COG3714	YhhN family
AM365_RS15385	COG3776	membrane
AM365_RS15390	COG0742	ribosomal rna small subunit methyltransferase
AM365_RS15395	COG0552	protein localization to endoplasmic reticulum
AM365_RS15400	COG2884	Cell division ATP-binding protein ftsE
AM365_RS15405	COG2177	Part of the ABC transporter FtsEX involved in
AM365_RS15410	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM365_RS15415	COG0683	leucine binding
AM365_RS15420	COG0456	acetyltransferase
AM365_RS15430	COG0683	leucine binding
AM365_RS15435	COG0559	Belongs to the binding-protein-dependent transport system permease family
AM365_RS15440	COG4177	L-phenylalanine transmembrane transporter activity
AM365_RS15445	COG0411	ABC transporter
AM365_RS15450	COG0410	ABC transporter
AM365_RS15455	COG1653	transport
AM365_RS15460	COG1175	transmembrane transport
AM365_RS15465	COG0395	ABC-type sugar transport system, permease component
AM365_RS15475	COG0584	glycerophosphoryl diester phosphodiesterase
AM365_RS15485	COG0405	Gamma-glutamyltransferase
AM365_RS15505	COG3157	Type VI secretion system effector, Hcp
AM365_RS15510	COG1247	-acetyltransferase
AM365_RS15520	COG0673	inositol 2-dehydrogenase activity
AM365_RS15525	COG1741	Belongs to the pirin family
AM365_RS15530	COG1609	Transcriptional regulator
AM365_RS15535	COG3265	gluconokinase activity
AM365_RS15540	COG2610	gluconate transmembrane transporter activity
AM365_RS15545	COG2095	MarC family integral membrane protein
AM365_RS15550	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM365_RS15575	COG0058	SHG alpha-glucan phosphorylase activity
AM365_RS15580	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM365_RS15600	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM365_RS15615	COG1349	DNA-binding transcription factor activity
AM365_RS15620	COG4650	regulator
AM365_RS15625	COG1690	Belongs to the RtcB family
AM365_RS15640	COG0058	SHG alpha-glucan phosphorylase activity
AM365_RS15645	COG1640	4-alpha-glucanotransferase
AM365_RS15650	COG2610	gluconate transmembrane transporter activity
AM365_RS15660	COG1040	competence protein
AM365_RS15685	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AM365_RS15690	COG1918	ferrous iron import across plasma membrane
AM365_RS15700	COG2183	response to ionizing radiation
AM365_RS15705	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM365_RS15735	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AM365_RS15745	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AM365_RS15750	COG1011	Hydrolase
AM365_RS15760	COG0494	nUDIX hydrolase
AM365_RS15765	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AM365_RS15770	COG4972	Pilus assembly protein
AM365_RS15775	COG3166	PFAM Fimbrial assembly family protein
AM365_RS15790	COG4796	Type ii and iii secretion system protein
AM365_RS15810	COG3266	domain, Protein
AM365_RS15815	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AM365_RS15820	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM365_RS15830	COG0180	Tryptophanyl-tRNA synthetase
AM365_RS15835	COG2188	Transcriptional regulator
AM365_RS15845	COG3457	Alanine racemase
AM365_RS15850	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AM365_RS15855	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AM365_RS15870	COG0626	cystathionine gamma-synthase activity
AM365_RS15885	COG2116	formate transmembrane transporter activity
AM365_RS15890	COG2146	nitrite reductase [NAD(P)H] activity
AM365_RS15895	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM365_RS15905	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM365_RS15915	COG2184	nucleotidyltransferase activity
AM365_RS15920	COG0512	Glutamine amidotransferase of anthranilate synthase
AM365_RS15925	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM365_RS15930	COG1289	transmembrane transporter activity
AM365_RS15935	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM365_RS15945	COG1765	OsmC-like protein
AM365_RS15950	COG3954	Phosphoribulokinase
AM365_RS15960	COG0429	hydrolase of the alpha beta-hydrolase fold
AM365_RS15965	COG0488	(ABC) transporter
AM365_RS15985	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AM365_RS15990	COG1047	Peptidyl-prolyl cis-trans
AM365_RS16000	COG0545	Peptidyl-prolyl cis-trans isomerase
AM365_RS16005	COG2964	Protein conserved in bacteria
AM365_RS16085	COG0089	rRNA binding
AM365_RS16175	COG0201	protein transport
AM365_RS16215	COG0789	Transcriptional regulator
AM365_RS16220	COG3036	rescue of stalled ribosome
AM365_RS16230	COG0569	domain protein
AM365_RS16250	COG0758	DNA mediated transformation
AM365_RS16260	COG0551	DNA topoisomerase type I activity
AM365_RS16280	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM365_RS16320	COG1126	abc transporter atp-binding protein
AM365_RS16325	COG0765	amino acid transport
AM365_RS16330	COG4597	amino acid ABC transporter
AM365_RS16335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS16350	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM365_RS16355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM365_RS16365	COG1309	transcriptional regulator
AM365_RS16375	COG2189	Belongs to the N(4) N(6)-methyltransferase family
AM365_RS16385	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM365_RS16395	COG4145	pantothenate transmembrane transporter activity
AM365_RS16400	COG3924	membrane
AM365_RS16405	COG0439	Biotin carboxylase
AM365_RS16410	COG0511	ligase activity, forming carbon-carbon bonds
AM365_RS16420	COG0604	alcohol dehydrogenase
AM365_RS16425	COG2199	diguanylate cyclase activity
AM365_RS16425	COG2200	EAL domain
AM365_RS16440	COG1077	Cell shape determining protein MreB Mrl
AM365_RS16445	COG1792	Involved in formation and maintenance of cell shape
AM365_RS16450	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AM365_RS16460	COG1530	ribonuclease E activity
AM365_RS16465	COG3164	Protein of unknown function
AM365_RS16470	COG0312	modulator of DNA gyrase
AM365_RS16475	COG0583	DNA-binding transcription factor activity
AM365_RS16495	COG2732	(Barnase) inhibitor
AM365_RS16515	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM365_RS16520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM365_RS16525	COG3105	Protein conserved in bacteria
AM365_RS16530	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM365_RS16555	COG0625	glutathione transferase activity
AM365_RS16560	COG2969	positive regulation of protein catabolic process
AM365_RS16565	COG3069	C4-dicarboxylate transmembrane transporter activity
AM365_RS16600	COG2731	YhcH YjgK YiaL family protein
AM365_RS16605	COG4804	nuclease activity
AM365_RS16610	COG0493	'glutamate synthase
AM365_RS16615	COG0067	glutamate synthase
AM365_RS16615	COG0069	glutamate synthase activity
AM365_RS16615	COG0070	glutamate synthase
AM365_RS16630	COG1242	4 iron, 4 sulfur cluster binding
AM365_RS16635	COG5002	protein histidine kinase activity
AM365_RS16635	COG2198	Histidine kinase
AM365_RS16635	COG0784	Response regulator, receiver
AM365_RS16640	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AM365_RS16650	COG0515	serine threonine protein kinase
AM365_RS16655	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS16670	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM365_RS16675	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AM365_RS16680	COG1137	ATPase activity
AM365_RS16685	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AM365_RS16690	COG3117	lipopolysaccharide transmembrane transporter activity
AM365_RS16695	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AM365_RS16700	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AM365_RS16700	COG0517	IMP dehydrogenase activity
AM365_RS16705	COG0530	calcium, potassium:sodium antiporter activity
AM365_RS16710	COG1127	ABC transporter
AM365_RS16715	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AM365_RS16720	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM365_RS16725	COG2854	intermembrane phospholipid transfer
AM365_RS16730	COG3113	response to antibiotic
AM365_RS16735	COG5007	Belongs to the BolA IbaG family
AM365_RS16745	COG3423	Transcriptional regulator
AM365_RS16750	COG0142	geranyltranstransferase activity
AM365_RS16765	COG0697	spore germination
AM365_RS16775	COG2027	D-alanyl-D-alanine carboxypeptidase
AM365_RS16780	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM365_RS16785	COG1534	Rna-binding protein
AM365_RS16795	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM365_RS16800	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AM365_RS16810	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM365_RS16825	COG2194	sulfuric ester hydrolase activity
AM365_RS16845	COG0195	Participates in both transcription termination and antitermination
AM365_RS16885	COG0513	Belongs to the DEAD box helicase family
AM365_RS16890	COG0814	amino acid
AM365_RS16895	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM365_RS16900	COG0826	peptidase U32
AM365_RS16905	COG0826	peptidase U32
AM365_RS16910	COG3154	lipid carrier protein
AM365_RS16915	COG3153	acetyltransferase
AM365_RS16930	COG0693	protein deglycase activity
AM365_RS16935	COG0702	epimerase
AM365_RS16940	COG0701	Predicted permease
AM365_RS16945	COG2823	Periplasmic or secreted lipoprotein
AM365_RS16960	COG3107	peptidoglycan biosynthetic process
AM365_RS16965	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AM365_RS16970	COG3539	Fimbrial protein
AM365_RS16975	COG3188	usher protein
AM365_RS16980	COG3121	Chaperone
AM365_RS16985	COG3539	Fimbrial protein
AM365_RS16990	COG0363	glucosamine-6-phosphate deaminase activity
AM365_RS16995	COG3716	PTS system mannose fructose sorbose family IID component
AM365_RS17000	COG3715	PTS system
AM365_RS17005	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS17015	COG2222	sugar isomerase
AM365_RS17020	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM365_RS17025	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS17030	COG3716	PTS system mannose fructose sorbose family IID component
AM365_RS17040	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS17055	COG1349	DNA-binding transcription factor activity
AM365_RS17065	COG2002	toxin-antitoxin pair type II binding
AM365_RS17070	COG2721	sulfolactate sulfo-lyase activity
AM365_RS17075	COG2271	Major facilitator Superfamily
AM365_RS17085	COG2084	Dehydrogenase
AM365_RS17090	COG1929	Belongs to the glycerate kinase type-1 family
AM365_RS17115	COG0583	DNA-binding transcription factor activity
AM365_RS17120	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM365_RS17130	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AM365_RS17135	COG1882	Formate acetyltransferase
AM365_RS17140	COG0251	oxidation-reduction process
AM365_RS17145	COG1760	l-serine dehydratase
AM365_RS17150	COG0814	amino acid
AM365_RS17165	COG1741	Belongs to the pirin family
AM365_RS17170	COG0583	DNA-binding transcription factor activity
AM365_RS17180	COG3152	Membrane
AM365_RS17185	COG3152	Membrane
AM365_RS17190	COG0435	Glutathione S-transferase
AM365_RS17195	COG2259	Doxx family
AM365_RS17205	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
AM365_RS17210	COG4575	ribosome binding
AM365_RS17215	COG1422	Protein of unknown function (DUF1090)
AM365_RS17225	COG0586	Pfam SNARE associated Golgi protein
AM365_RS17230	COG2186	Transcriptional regulator
AM365_RS17255	COG2271	Major facilitator Superfamily
AM365_RS17265	COG2721	sulfolactate sulfo-lyase activity
AM365_RS17275	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AM365_RS17285	COG0861	Integral membrane protein TerC family
AM365_RS17290	COG0673	inositol 2-dehydrogenase activity
AM365_RS17295	COG2949	membrane
AM365_RS17300	COG1451	nucleotide metabolic process
AM365_RS17310	COG1902	pentaerythritol trinitrate reductase activity
AM365_RS17310	COG0446	pyridine nucleotide-disulphide oxidoreductase
AM365_RS17315	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
AM365_RS17315	COG3408	Glycogen debranching enzyme
AM365_RS17325	COG0531	amino acid
AM365_RS17330	COG2731	YhcH YjgK YiaL family protein
AM365_RS17335	COG3250	beta-galactosidase activity
AM365_RS17340	COG1609	Transcriptional regulator
AM365_RS17350	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AM365_RS17365	COG0840	transmembrane signaling receptor activity
AM365_RS17370	COG1695	Transcriptional regulator
AM365_RS17380	COG2375	cellular response to nickel ion
AM365_RS17395	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM365_RS17405	COG0358	DNA primase activity
AM365_RS17410	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AM365_RS17420	COG0471	metal ion transport
AM365_RS17425	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM365_RS17430	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM365_RS17450	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM365_RS17465	COG4991	sh3 domain protein
AM365_RS17475	COG3025	triphosphatase activity
AM365_RS17495	COG2268	Band 7 protein
AM365_RS17500	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM365_RS17510	COG3539	Fimbrial protein
AM365_RS17515	COG3121	Chaperone
AM365_RS17520	COG3188	usher protein
AM365_RS17525	COG3539	Fimbrial protein
AM365_RS17530	COG2960	long-chain fatty acid transporting porin activity
AM365_RS17550	COG3384	dioxygenase
AM365_RS17555	COG0754	glutathionylspermidine amidase activity
AM365_RS17570	COG1538	Outer membrane efflux protein
AM365_RS17575	COG0494	nUDIX hydrolase
AM365_RS17580	COG3151	Protein conserved in bacteria
AM365_RS17585	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM365_RS17590	COG3150	esterase
AM365_RS17595	COG0187	DNA topoisomerase II activity
AM365_RS17600	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AM365_RS17605	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM365_RS17615	COG0642	Histidine kinase
AM365_RS17620	COG0745	RESPONSE REGULATOR receiver
AM365_RS17625	COG3111	PFAM Bacterial OB fold (BOF) protein
AM365_RS17630	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AM365_RS17640	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AM365_RS17645	COG0204	Acyl-transferase
AM365_RS17650	COG2132	Multicopper oxidase
AM365_RS17655	COG1032	radical SAM domain protein
AM365_RS17660	COG4238	major outer membrane lipoprotein
AM365_RS17670	COG0656	L-ascorbic acid biosynthetic process
AM365_RS17675	COG1979	alcohol dehydrogenase
AM365_RS17680	COG2207	Transcriptional regulator
AM365_RS17685	COG0586	Pfam SNARE associated Golgi protein
AM365_RS17690	COG0626	cystathionine gamma-synthase activity
AM365_RS17700	COG0811	peptide transport
AM365_RS17705	COG0848	biopolymer transport protein
AM365_RS17715	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS17720	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS17730	COG0667	Aldo Keto reductase
AM365_RS17750	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AM365_RS17755	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS17760	COG5557	Pfam Polysulphide reductase, NrfD
AM365_RS17765	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AM365_RS17770	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM365_RS17775	COG1773	rubredoxin
AM365_RS17780	COG0375	protein maturation
AM365_RS17785	COG0298	carbon dioxide binding
AM365_RS17790	COG0625	glutathione transferase activity
AM365_RS17795	COG0754	glutathionylspermidine amidase activity
AM365_RS17800	COG0306	phosphate transporter
AM365_RS17805	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AM365_RS17810	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AM365_RS17815	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AM365_RS17820	COG2244	polysaccharide biosynthetic process
AM365_RS17830	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM365_RS17835	COG0795	lipopolysaccharide-transporting ATPase activity
AM365_RS17845	COG0156	8-amino-7-oxononanoate synthase activity
AM365_RS17850	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AM365_RS17860	COG0318	PFAM AMP-dependent synthetase and ligase
AM365_RS17870	COG0456	acetyltransferase
AM365_RS17875	COG2186	Transcriptional regulator
AM365_RS17880	COG0277	FAD linked oxidase domain protein
AM365_RS17885	COG0277	FAD linked oxidase domain protein
AM365_RS17890	COG0247	lactate metabolic process
AM365_RS17895	COG3193	protein, possibly involved in utilization of glycolate and propanediol
AM365_RS17900	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM365_RS17905	COG1620	l-lactate permease
AM365_RS17920	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AM365_RS17940	COG2194	sulfuric ester hydrolase activity
AM365_RS17945	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM365_RS17945	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AM365_RS17965	COG0582	viral genome integration into host DNA
AM365_RS17975	COG1811	Na channel or pump
AM365_RS17985	COG1982	Orn Lys Arg decarboxylase major
AM365_RS17990	COG2211	Major facilitator Superfamily
AM365_RS18005	COG1194	a g-specific adenine glycosylase
AM365_RS18020	COG3171	Protein conserved in bacteria
AM365_RS18030	COG0252	asparaginase activity
AM365_RS18040	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM365_RS18055	COG0762	integral membrane protein
AM365_RS18060	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AM365_RS18065	COG2805	Type II/IV secretion system protein
AM365_RS18080	COG0189	ligase activity
AM365_RS18085	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AM365_RS18090	COG2356	endonuclease I
AM365_RS18100	COG2814	Major facilitator Superfamily
AM365_RS18125	COG1166	arginine decarboxylase activity
AM365_RS18150	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS18150	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS18155	COG3715	PTS system
AM365_RS18160	COG3716	PTS system mannose fructose sorbose family IID component
AM365_RS18175	COG0501	Belongs to the peptidase M48B family
AM365_RS18180	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM365_RS18185	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS18190	COG2213	PTS system mannitol-specific
AM365_RS18195	COG1063	alcohol dehydrogenase
AM365_RS18200	COG1494	fructose-1,6-bisphosphatase
AM365_RS18210	COG1072	(Pantothenic acid kinase))
AM365_RS18215	COG1122	ATPase activity
AM365_RS18220	COG1122	ATPase activity
AM365_RS18255	COG0191	fructose-bisphosphate aldolase activity
AM365_RS18260	COG0668	transmembrane transport
AM365_RS18265	COG1279	arginine transmembrane transporter activity
AM365_RS18270	COG2968	Membrane
AM365_RS18275	COG0583	DNA-binding transcription factor activity
AM365_RS18280	COG0427	acetyl-CoA hydrolase
AM365_RS18285	COG1024	Enoyl-CoA hydratase
AM365_RS18290	COG1703	isobutyryl-CoA mutase activity
AM365_RS18295	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AM365_RS18295	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AM365_RS18320	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM365_RS18335	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AM365_RS18360	COG0006	proline dipeptidase activity
AM365_RS18365	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM365_RS18370	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM365_RS18390	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS18395	COG2723	6-phospho-beta-galactosidase activity
AM365_RS18405	COG1272	protein, Hemolysin III
AM365_RS18415	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AM365_RS18425	COG0716	FMN binding
AM365_RS18430	COG4974	Belongs to the 'phage' integrase family
AM365_RS18435	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM365_RS18440	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AM365_RS18465	COG2233	PERMEase
AM365_RS18475	COG0493	'glutamate synthase
AM365_RS18475	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS18480	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS18485	COG2252	PERMEase
AM365_RS18490	COG0402	S-adenosylhomocysteine deaminase activity
AM365_RS18495	COG2233	PERMEase
AM365_RS18500	COG2080	2 iron, 2 sulfur cluster binding
AM365_RS18500	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AM365_RS18505	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AM365_RS18510	COG0402	S-adenosylhomocysteine deaminase activity
AM365_RS18515	COG0493	'glutamate synthase
AM365_RS18515	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS18520	COG2068	MobA-Related Protein
AM365_RS18525	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AM365_RS18530	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AM365_RS18530	COG3608	succinylglutamate desuccinylase aspartoacylase
AM365_RS18535	COG0549	Belongs to the carbamate kinase family
AM365_RS18545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AM365_RS18550	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM365_RS18555	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AM365_RS18560	COG3829	transcription factor binding
AM365_RS18565	COG2080	2 iron, 2 sulfur cluster binding
AM365_RS18570	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AM365_RS18575	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AM365_RS18585	COG4942	peptidase
AM365_RS18675	COG3387	PFAM Glycoside hydrolase 15-related
AM365_RS18760	COG2197	response regulator
AM365_RS18780	COG3710	Transcriptional regulator
AM365_RS18780	COG0457	Tetratricopeptide repeat
AM365_RS18785	COG0457	Tetratricopeptide repeat
AM365_RS18810	COG3710	Transcriptional regulator
AM365_RS18815	COG2771	luxR family
AM365_RS18820	COG0814	amino acid
AM365_RS18825	COG0183	Belongs to the thiolase family
AM365_RS18840	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS18845	COG2814	Major facilitator Superfamily
AM365_RS18850	COG1794	racemase activity, acting on amino acids and derivatives
AM365_RS18855	COG0583	DNA-binding transcription factor activity
AM365_RS18865	COG1609	Transcriptional regulator
AM365_RS18880	COG0667	Aldo Keto reductase
AM365_RS18890	COG0861	Integral membrane protein TerC family
AM365_RS18905	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
AM365_RS18920	COG2165	general secretion pathway protein
AM365_RS18925	COG4795	General secretion pathway protein
AM365_RS18935	COG4967	type IV pilus modification protein PilV
AM365_RS18940	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AM365_RS18945	COG1025	Belongs to the peptidase M16 family
AM365_RS18950	COG1074	ATP-dependent DNA helicase activity
AM365_RS18955	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AM365_RS18960	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AM365_RS18960	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AM365_RS18965	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM365_RS18990	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AM365_RS18995	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AM365_RS19000	COG2166	iron-sulfur cluster assembly
AM365_RS19005	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AM365_RS19015	COG0583	DNA-binding transcription factor activity
AM365_RS19020	COG2363	Small membrane protein
AM365_RS19030	COG1349	DNA-binding transcription factor activity
AM365_RS19040	COG1070	Carbohydrate kinase
AM365_RS19050	COG0738	Major facilitator superfamily
AM365_RS19055	COG0235	Class ii aldolase
AM365_RS19060	COG1454	alcohol dehydrogenase
AM365_RS19070	COG1760	l-serine dehydratase
AM365_RS19075	COG0814	amino acid
AM365_RS19080	COG1611	Belongs to the LOG family
AM365_RS19095	COG3098	single-species biofilm formation
AM365_RS19100	COG0564	pseudouridine synthase activity
AM365_RS19105	COG0716	FMN binding
AM365_RS19110	COG2271	Major facilitator Superfamily
AM365_RS19115	COG4948	Mandelate Racemase Muconate Lactonizing
AM365_RS19120	COG4948	Mandelate Racemase Muconate Lactonizing
AM365_RS19125	COG3850	Histidine kinase
AM365_RS19125	COG3437	response regulator, receiver
AM365_RS19125	COG2205	protein histidine kinase activity
AM365_RS19125	COG4999	Histidine kinase
AM365_RS19135	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM365_RS19140	COG2336	PFAM SpoVT AbrB
AM365_RS19145	COG2337	Toxic component of a toxin-antitoxin (TA) module
AM365_RS19150	COG3956	TIGRFAM MazG family protein
AM365_RS19165	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AM365_RS19175	COG0602	queuosine metabolic process
AM365_RS19180	COG1070	Carbohydrate kinase
AM365_RS19185	COG2223	nitrite transmembrane transporter activity
AM365_RS19190	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS19195	COG0277	FAD linked oxidase domain protein
AM365_RS19200	COG0477	Major facilitator Superfamily
AM365_RS19205	COG2086	electron transfer activity
AM365_RS19210	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AM365_RS19215	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AM365_RS19220	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AM365_RS19225	COG0644	oxidoreductase
AM365_RS19230	COG0720	synthase
AM365_RS19255	COG1203	CRISPR-associated helicase, Cas3
AM365_RS19275	COG1857	crispr-associated protein
AM365_RS19290	COG1518	maintenance of DNA repeat elements
AM365_RS19295	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM365_RS19300	COG2234	aminopeptidase activity
AM365_RS19355	COG1388	LysM domain
AM365_RS19355	COG4942	peptidase
AM365_RS19360	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM365_RS19375	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM365_RS19385	COG2610	gluconate transmembrane transporter activity
AM365_RS19390	COG3622	Belongs to the hyi family
AM365_RS19395	COG0235	Class ii aldolase
AM365_RS19400	COG3395	kinase activity
AM365_RS19405	COG2084	Dehydrogenase
AM365_RS19410	COG1349	DNA-binding transcription factor activity
AM365_RS19415	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AM365_RS19430	COG3604	Transcriptional regulator
AM365_RS19435	COG0309	Hydrogenase expression formation protein (HypE)
AM365_RS19440	COG0409	Hydrogenase expression formation protein
AM365_RS19445	COG0298	carbon dioxide binding
AM365_RS19450	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AM365_RS19455	COG0375	protein maturation
AM365_RS19470	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS19475	COG0651	ATP synthesis coupled electron transport
AM365_RS19480	COG0650	Formate hydrogenlyase subunit 4
AM365_RS19485	COG3261	NADH dehydrogenase
AM365_RS19485	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM365_RS19490	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM365_RS19495	COG3260	NADH ubiquinone oxidoreductase 20
AM365_RS19505	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM365_RS19510	COG2723	6-phospho-beta-galactosidase activity
AM365_RS19515	COG1263	PTS System
AM365_RS19515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS19520	COG1609	Transcriptional regulator
AM365_RS19525	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS19530	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AM365_RS19550	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AM365_RS19550	COG0517	IMP dehydrogenase activity
AM365_RS19555	COG1349	DNA-binding transcription factor activity
AM365_RS19560	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS19565	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS19575	COG3732	PTS system glucitol sorbitol-specific
AM365_RS19580	COG3730	PTS system glucitol sorbitol-specific
AM365_RS19585	COG2951	lytic endotransglycosylase activity
AM365_RS19590	COG1546	Belongs to the CinA family
AM365_RS19610	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AM365_RS19640	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM365_RS19645	COG1238	metal cluster binding
AM365_RS19660	COG2814	Major facilitator Superfamily
AM365_RS19665	COG1566	PFAM secretion protein HlyD family protein
AM365_RS19670	COG1846	Transcriptional regulator
AM365_RS19680	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AM365_RS19685	COG2814	Major facilitator Superfamily
AM365_RS19690	COG2113	Glycine betaine
AM365_RS19695	COG4176	ABC-type proline glycine betaine transport system permease component
AM365_RS19700	COG4175	Glycine betaine
AM365_RS19705	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM365_RS19710	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM365_RS19720	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM365_RS19725	COG4575	ribosome binding
AM365_RS19740	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM365_RS19745	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM365_RS19750	COG0640	Transcriptional regulator
AM365_RS19755	COG0401	homolog of Blt101
AM365_RS19760	COG1652	LysM domain
AM365_RS19765	COG1802	Transcriptional regulator
AM365_RS19770	COG1113	amino acid transport
AM365_RS19775	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM365_RS19780	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS19785	COG0579	oxidoreductase
AM365_RS19795	COG0366	Alpha amylase catalytic
AM365_RS19835	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS19855	COG2867	negative regulation of translational initiation
AM365_RS19865	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM365_RS19870	COG0497	DNA recombination
AM365_RS19890	COG4536	flavin adenine dinucleotide binding
AM365_RS19895	COG4137	Cytochrome C assembly protein
AM365_RS19900	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AM365_RS19925	COG2885	chlorophyll binding
AM365_RS19930	COG2199	diguanylate cyclase activity
AM365_RS19945	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM365_RS19950	COG0287	Prephenate dehydrogenase
AM365_RS19950	COG1605	Chorismate mutase
AM365_RS19955	COG1605	Chorismate mutase
AM365_RS19955	COG0077	Prephenate dehydratase
AM365_RS19960	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM365_RS19970	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM365_RS19975	COG0564	pseudouridine synthase activity
AM365_RS19980	COG1496	oxidoreductase activity
AM365_RS19985	COG0542	response to heat
AM365_RS20015	COG0477	Major facilitator Superfamily
AM365_RS20020	COG5544	Lipoprotein
AM365_RS20025	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM365_RS20030	COG0045	succinate-CoA ligase (ADP-forming) activity
AM365_RS20030	COG1042	CoA-binding domain protein
AM365_RS20030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM365_RS20035	COG3148	PFAM DTW domain containing protein
AM365_RS20040	COG3118	belongs to the thioredoxin family
AM365_RS20050	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM365_RS20070	COG0583	DNA-binding transcription factor activity
AM365_RS20075	COG0513	Belongs to the DEAD box helicase family
AM365_RS20085	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AM365_RS20090	COG1595	DNA-templated transcription, initiation
AM365_RS20095	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AM365_RS20100	COG3026	antisigma factor binding
AM365_RS20105	COG3086	response to oxidative stress
AM365_RS20115	COG0681	Belongs to the peptidase S26 family
AM365_RS20140	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AM365_RS20165	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS20170	COG1737	Transcriptional regulator
AM365_RS20175	COG0560	Phosphoserine phosphatase
AM365_RS20195	COG0047	phosphoribosylformylglycinamidine synthase activity
AM365_RS20195	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AM365_RS20200	COG2205	protein histidine kinase activity
AM365_RS20205	COG3170	Tfp pilus assembly protein FimV
AM365_RS20210	COG2204	response regulator
AM365_RS20215	COG0347	Belongs to the P(II) protein family
AM365_RS20220	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM365_RS20220	COG1017	nitric oxide dioxygenase activity
AM365_RS20230	COG1940	carbohydrate kinase activity
AM365_RS20235	COG0457	Tetratricopeptide repeat
AM365_RS20240	COG1879	ABC-type sugar transport system periplasmic component
AM365_RS20245	COG1129	ABC transporter
AM365_RS20250	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM365_RS20255	COG1063	alcohol dehydrogenase
AM365_RS20260	COG2017	converts alpha-aldose to the beta-anomer
AM365_RS20265	COG2259	Doxx family
AM365_RS20290	COG4638	Rieske (2fe-2S)
AM365_RS20295	COG0583	DNA-binding transcription factor activity
AM365_RS20300	COG2814	Major facilitator Superfamily
AM365_RS20305	COG3711	transcriptional antiterminator
AM365_RS20310	COG1073	alpha beta
AM365_RS20315	COG0483	inositol monophosphate 1-phosphatase activity
AM365_RS20335	COG0822	iron-sulfur transferase activity
AM365_RS20355	COG0633	Ferredoxin
AM365_RS20360	COG2975	iron-sulfur cluster assembly
AM365_RS20375	COG2897	thiosulfate sulfurtransferase activity
AM365_RS20380	COG2373	Large extracellular alpha-helical protein
AM365_RS20385	COG4953	penicillin-binding protein 1C
AM365_RS20415	COG2976	Protein conserved in bacteria
AM365_RS20430	COG1645	bacterial-type flagellum-dependent swarming motility
AM365_RS20440	COG0516	GMP reductase activity
AM365_RS20440	COG0517	IMP dehydrogenase activity
AM365_RS20455	COG3133	Outer membrane lipoprotein
AM365_RS20475	COG2200	EAL domain
AM365_RS20480	COG0248	Ppx GppA phosphatase
AM365_RS20485	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AM365_RS20490	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AM365_RS20510	COG2233	PERMEase
AM365_RS20520	COG1393	Belongs to the ArsC family
AM365_RS20525	COG4783	chaperone-mediated protein folding
AM365_RS20530	COG0628	permease
AM365_RS20535	COG2116	formate transmembrane transporter activity
AM365_RS20540	COG2116	formate transmembrane transporter activity
AM365_RS20545	COG3604	Transcriptional regulator
AM365_RS20555	COG3260	NADH ubiquinone oxidoreductase 20
AM365_RS20560	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM365_RS20565	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM365_RS20565	COG3261	NADH dehydrogenase
AM365_RS20570	COG0651	ATP synthesis coupled electron transport
AM365_RS20580	COG4237	Hydrogenase 4 membrane
AM365_RS20590	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM365_RS20595	COG0650	Formate hydrogenlyase subunit 4
AM365_RS20600	COG0651	ATP synthesis coupled electron transport
AM365_RS20605	COG0651	ATP synthesis coupled electron transport
AM365_RS20610	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS20615	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AM365_RS20620	COG2716	regulation of RNA biosynthetic process
AM365_RS20630	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AM365_RS20650	COG2321	neutral zinc metallopeptidase
AM365_RS20660	COG0400	carboxylic ester hydrolase activity
AM365_RS20675	COG1393	Belongs to the ArsC family
AM365_RS20685	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM365_RS20690	COG3850	Histidine kinase
AM365_RS20695	COG0493	'glutamate synthase
AM365_RS20695	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS20705	COG5342	invasion associated locus B
AM365_RS20710	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM365_RS20715	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM365_RS20725	COG0281	malic enzyme
AM365_RS20725	COG0280	phosphate acetyltransferase
AM365_RS20730	COG4810	utilization protein
AM365_RS20735	COG4917	ethanolamine utilization protein
AM365_RS20740	COG4766	ethanolamine catabolic process
AM365_RS20745	COG4812	Cobalamin adenosyltransferase
AM365_RS20750	COG0280	phosphate acetyltransferase
AM365_RS20755	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AM365_RS20760	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
AM365_RS20765	COG1012	belongs to the aldehyde dehydrogenase family
AM365_RS20770	COG4820	ethanolamine utilization protein (EutJ)
AM365_RS20775	COG1454	alcohol dehydrogenase
AM365_RS20780	COG3192	ethanolamine utilization protein
AM365_RS20785	COG4819	ethanolamine utilization protein
AM365_RS20790	COG4303	Ethanolamine ammonia lyase large subunit
AM365_RS20800	COG4816	utilization protein
AM365_RS20805	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AM365_RS20810	COG2207	Transcriptional regulator
AM365_RS20820	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM365_RS20840	COG2837	iron assimilation
AM365_RS20845	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM365_RS20850	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS20850	COG1263	PTS System
AM365_RS20865	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS20870	COG4150	thiosulfate binding
AM365_RS20875	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AM365_RS20880	COG4208	sulfate ABC transporter
AM365_RS20885	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AM365_RS20890	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AM365_RS20905	COG2190	(PTS) system
AM365_RS20910	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM365_RS20915	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS20920	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AM365_RS20940	COG3530	Putative quorum-sensing-regulated virulence factor
AM365_RS20945	COG0385	Bile acid
AM365_RS20950	COG0583	DNA-binding transcription factor activity
AM365_RS20960	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AM365_RS20965	COG2211	Major facilitator Superfamily
AM365_RS20975	COG0583	DNA-binding transcription factor activity
AM365_RS21005	COG3415	Transposase
AM365_RS21010	COG3415	Transposase
AM365_RS21025	COG2199	diguanylate cyclase activity
AM365_RS21025	COG2200	EAL domain
AM365_RS21030	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM365_RS21055	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS21060	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS21065	COG0006	proline dipeptidase activity
AM365_RS21070	COG1363	Peptidase, m42
AM365_RS21080	COG2207	Transcriptional regulator
AM365_RS21085	COG3279	Response regulator of the LytR AlgR family
AM365_RS21090	COG3275	phosphorelay sensor kinase activity
AM365_RS21095	COG0436	Aminotransferase
AM365_RS21105	COG1560	Kdo2-lipid A biosynthetic process
AM365_RS21135	COG0028	Belongs to the TPP enzyme family
AM365_RS21140	COG0679	Auxin Efflux Carrier
AM365_RS21145	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AM365_RS21150	COG2205	protein histidine kinase activity
AM365_RS21150	COG2198	Histidine kinase
AM365_RS21150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS21150	COG0784	Response regulator, receiver
AM365_RS21155	COG2197	response regulator
AM365_RS21160	COG1566	PFAM secretion protein HlyD family protein
AM365_RS21165	COG0477	Major facilitator Superfamily
AM365_RS21175	COG2610	gluconate transmembrane transporter activity
AM365_RS21255	COG2963	transposase activity
AM365_RS21260	COG2801	Transposase and inactivated derivatives
AM365_RS21280	COG3422	double-strand break repair
AM365_RS21295	COG0582	viral genome integration into host DNA
AM365_RS21345	COG3723	Recombinational DNA repair protein, rece pathway
AM365_RS21395	COG0305	Participates in initiation and elongation during chromosome replication
AM365_RS21495	COG1783	phage Terminase large subunit
AM365_RS21615	COG0582	viral genome integration into host DNA
AM365_RS21625	COG2116	formate transmembrane transporter activity
AM365_RS21635	COG2853	Lipoprotein
AM365_RS21650	COG2067	long-chain fatty acid transport protein
AM365_RS21660	COG3691	Protein conserved in bacteria
AM365_RS21675	COG2062	phosphohistidine phosphatase, SixA
AM365_RS21680	COG3539	Fimbrial protein
AM365_RS21685	COG3188	usher protein
AM365_RS21690	COG3121	Chaperone
AM365_RS21695	COG3539	Fimbrial protein
AM365_RS21700	COG3539	Fimbrial protein
AM365_RS21705	COG3539	Fimbrial protein
AM365_RS21720	COG2890	protein-(glutamine-N5) methyltransferase activity
AM365_RS21735	COG0730	response to heat
AM365_RS21740	COG3101	peptidyl-lysine hydroxylation
AM365_RS21755	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS21765	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM365_RS21775	COG2814	Major facilitator Superfamily
AM365_RS21790	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM365_RS21800	COG0586	Pfam SNARE associated Golgi protein
AM365_RS21810	COG0285	dihydrofolate synthase activity
AM365_RS21815	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AM365_RS21820	COG1286	toxin biosynthetic process
AM365_RS21825	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AM365_RS21830	COG0163	prenyltransferase activity
AM365_RS21835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS21840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS21845	COG4215	(ABC) transporter
AM365_RS21850	COG4160	amino acid transport
AM365_RS21855	COG4598	ABC transporter
AM365_RS21860	COG5464	transposase or invertase
AM365_RS21865	COG1090	epimerase
AM365_RS21870	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM365_RS21875	COG0625	glutathione transferase activity
AM365_RS21880	COG0625	glutathione transferase activity
AM365_RS21885	COG0622	Phosphoesterase
AM365_RS21890	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AM365_RS21895	COG1288	antiporter activity
AM365_RS21900	COG0280	phosphate acetyltransferase
AM365_RS21900	COG0857	belongs to the CobB CobQ family
AM365_RS21905	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AM365_RS21920	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM365_RS21925	COG0490	domain, Protein
AM365_RS21925	COG0471	metal ion transport
AM365_RS21935	COG0436	Aminotransferase
AM365_RS21945	COG0583	DNA-binding transcription factor activity
AM365_RS21965	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
AM365_RS21970	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AM365_RS21975	COG1034	ATP synthesis coupled electron transport
AM365_RS21990	COG0839	Belongs to the complex I subunit 6 family
AM365_RS22000	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM365_RS22005	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM365_RS22020	COG2234	aminopeptidase activity
AM365_RS22030	COG3039	Transposase
AM365_RS22035	COG5160	protein modification by small protein removal
AM365_RS22045	COG2153	protein acetylation
AM365_RS22050	COG4575	ribosome binding
AM365_RS22055	COG1169	isochorismate synthase
AM365_RS22070	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AM365_RS22080	COG0318	PFAM AMP-dependent synthetase and ligase
AM365_RS22150	COG1414	Transcriptional regulator
AM365_RS22160	COG2271	Major facilitator Superfamily
AM365_RS22170	COG5464	transposase or invertase
AM365_RS22175	COG0247	lactate metabolic process
AM365_RS22185	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM365_RS22190	COG2271	Major facilitator Superfamily
AM365_RS22195	COG0584	glycerophosphoryl diester phosphodiesterase
AM365_RS22200	COG0583	DNA-binding transcription factor activity
AM365_RS22205	COG2814	Major facilitator Superfamily
AM365_RS22210	COG3642	lipopolysaccharide core region biosynthetic process
AM365_RS22215	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM365_RS22220	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM365_RS22225	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM365_RS22235	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS22245	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AM365_RS22250	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
AM365_RS22255	COG3234	Protein of unknown function (DUF1175)
AM365_RS22260	COG2373	Large extracellular alpha-helical protein
AM365_RS22265	COG5445	Predicted secreted protein (DUF2300)
AM365_RS22270	COG4676	Protein conserved in bacteria
AM365_RS22275	COG0784	Response regulator, receiver
AM365_RS22275	COG2205	protein histidine kinase activity
AM365_RS22280	COG2197	response regulator
AM365_RS22285	COG0642	Histidine kinase
AM365_RS22285	COG2198	Histidine kinase
AM365_RS22300	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM365_RS22305	COG1477	protein flavinylation
AM365_RS22310	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM365_RS22310	COG2169	Transcriptional regulator
AM365_RS22315	COG3145	DNA-N1-methyladenine dioxygenase activity
AM365_RS22320	COG4615	Cyclic peptide transporter
AM365_RS22340	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS22340	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM365_RS22345	COG3062	negative regulation of establishment of protein localization
AM365_RS22355	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS22360	COG0348	domain, Protein
AM365_RS22365	COG3043	anaerobic respiration
AM365_RS22370	COG3005	denitrification pathway
AM365_RS22375	COG4133	protoheme IX ABC transporter activity
AM365_RS22380	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM365_RS22385	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM365_RS22390	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM365_RS22400	COG1138	Cytochrome C-type biogenesis protein
AM365_RS22405	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM365_RS22410	COG3088	subunit of a heme lyase
AM365_RS22410	COG4235	cytochrome complex assembly
AM365_RS22415	COG2197	response regulator
AM365_RS22425	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS22430	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS22440	COG3083	sulfuric ester hydrolase activity
AM365_RS22460	COG1061	Type III restriction enzyme res subunit
AM365_RS22470	COG1187	pseudouridine synthase activity
AM365_RS22475	COG2814	Major facilitator Superfamily
AM365_RS22490	COG4172	Belongs to the ABC transporter superfamily
AM365_RS22495	COG4239	(ABC) transporter, permease
AM365_RS22500	COG4174	ABC transporter (Permease)
AM365_RS22505	COG4166	transmembrane transport
AM365_RS22510	COG2200	EAL domain
AM365_RS22515	COG0791	NLP P60 protein
AM365_RS22520	COG0671	phosphoesterase, PA-phosphatase related
AM365_RS22525	COG0523	cobalamin synthesis protein
AM365_RS22530	COG0246	Mannitol dehydrogenase
AM365_RS22545	COG2814	Major facilitator Superfamily
AM365_RS22550	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS22550	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS22555	COG1105	Belongs to the carbohydrate kinase PfkB family
AM365_RS22560	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS22560	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM365_RS22560	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM365_RS22565	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM365_RS22570	COG2313	pseudouridylate synthase activity
AM365_RS22575	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM365_RS22580	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM365_RS22590	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM365_RS22595	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM365_RS22595	COG1522	sequence-specific DNA binding
AM365_RS22605	COG2855	membrane
AM365_RS22610	COG0583	DNA-binding transcription factor activity
AM365_RS22620	COG0833	amino acid
AM365_RS22630	COG4771	TonB-dependent receptor
AM365_RS22655	COG2311	Membrane
AM365_RS22665	COG1609	Transcriptional regulator
AM365_RS22670	COG1879	ABC-type sugar transport system periplasmic component
AM365_RS22675	COG1129	ABC transporter
AM365_RS22680	COG4211	Belongs to the binding-protein-dependent transport system permease family
AM365_RS22685	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AM365_RS22685	COG0167	dihydroorotate dehydrogenase activity
AM365_RS22690	COG0493	'glutamate synthase
AM365_RS22700	COG2949	membrane
AM365_RS22710	COG1346	cytolysis
AM365_RS22720	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM365_RS22745	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS22750	COG0586	Pfam SNARE associated Golgi protein
AM365_RS22760	COG1686	Belongs to the peptidase S11 family
AM365_RS22765	COG0277	FAD linked oxidase domain protein
AM365_RS22770	COG1472	Belongs to the glycosyl hydrolase 3 family
AM365_RS22775	COG1732	Glycine betaine
AM365_RS22780	COG1174	glycine betaine transport
AM365_RS22785	COG1125	glycine betaine transport
AM365_RS22790	COG1174	glycine betaine transport
AM365_RS22800	COG0789	Transcriptional regulator
AM365_RS22805	COG3275	phosphorelay sensor kinase activity
AM365_RS22810	COG3279	Response regulator of the LytR AlgR family
AM365_RS22815	COG4807	Protein conserved in bacteria
AM365_RS22820	COG4808	Protein conserved in bacteria
AM365_RS22825	COG4715	Zinc finger, swim domain protein
AM365_RS22830	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AM365_RS22835	COG2425	protein containing a von Willebrand factor type A (vWA) domain
AM365_RS22840	COG0714	Associated with various cellular activities
AM365_RS22850	COG3831	ATPase activity
AM365_RS22855	COG3831	ATPase activity
AM365_RS22865	COG0489	protein tyrosine kinase activity
AM365_RS22880	COG3539	Fimbrial protein
AM365_RS22885	COG3121	Chaperone
AM365_RS22890	COG3188	usher protein
AM365_RS22895	COG3539	Fimbrial protein
AM365_RS22900	COG5455	response to cobalt ion
AM365_RS22920	COG0351	phosphomethylpyrimidine kinase
AM365_RS22925	COG3757	hydrolase, family 25
AM365_RS22930	COG2188	Transcriptional regulator
AM365_RS22935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM365_RS22940	COG1397	ADP-ribosylglycohydrolase
AM365_RS22945	COG2211	Major facilitator Superfamily
AM365_RS22950	COG1830	Aldolase
AM365_RS22970	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS22975	COG3414	Phosphotransferase system galactitol-specific IIB component
AM365_RS22980	COG3775	system Galactitol-specific IIC component
AM365_RS22985	COG1063	alcohol dehydrogenase
AM365_RS23010	COG0826	peptidase U32
AM365_RS23020	COG3609	addiction module antidote protein, CC2985 family
AM365_RS23030	COG0745	RESPONSE REGULATOR receiver
AM365_RS23035	COG2205	protein histidine kinase activity
AM365_RS23065	COG4245	von Willebrand factor, type A
AM365_RS23070	COG0631	protein serine/threonine phosphatase activity
AM365_RS23075	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
AM365_RS23080	COG0443	Heat shock 70 kDa protein
AM365_RS23085	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AM365_RS23090	COG5002	protein histidine kinase activity
AM365_RS23090	COG3447	MASE1 domain protein
AM365_RS23090	COG5001	Diguanylate cyclase
AM365_RS23095	COG0572	uridine kinase
AM365_RS23105	COG2982	Protein involved in outer membrane biogenesis
AM365_RS23110	COG1253	flavin adenine dinucleotide binding
AM365_RS23115	COG1596	polysaccharide export
AM365_RS23120	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AM365_RS23125	COG3206	protein involved in exopolysaccharide biosynthesis
AM365_RS23125	COG0489	protein tyrosine kinase activity
AM365_RS23130	COG0463	Glycosyl transferase, family 2
AM365_RS23135	COG1045	serine acetyltransferase
AM365_RS23140	COG0438	transferase activity, transferring glycosyl groups
AM365_RS23150	COG1216	Glycosyl transferase, family 2
AM365_RS23155	COG0110	maltose O-acetyltransferase activity
AM365_RS23160	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
AM365_RS23165	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM365_RS23170	COG1051	belongs to the nudix hydrolase family
AM365_RS23175	COG0297	glycogen (starch) synthase activity
AM365_RS23180	COG0662	Cupin 2, conserved barrel domain protein
AM365_RS23180	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
AM365_RS23185	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AM365_RS23190	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AM365_RS23195	COG2244	polysaccharide biosynthetic process
AM365_RS23200	COG2327	Polysaccharide pyruvyl transferase
AM365_RS23205	COG0438	transferase activity, transferring glycosyl groups
AM365_RS23215	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM365_RS23220	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AM365_RS23235	COG2089	acid synthase
AM365_RS23250	COG2244	polysaccharide biosynthetic process
AM365_RS23275	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AM365_RS23280	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AM365_RS23305	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AM365_RS23310	COG0131	Imidazoleglycerol-phosphate dehydratase
AM365_RS23310	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM365_RS23320	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AM365_RS23340	COG2161	toxin-antitoxin pair type II binding
AM365_RS23345	COG4115	mRNA cleavage
AM365_RS23350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM365_RS23355	COG0583	DNA-binding transcription factor activity
AM365_RS23360	COG0531	amino acid
AM365_RS23365	COG2391	methyltransferase activity
AM365_RS23370	COG0425	Belongs to the sulfur carrier protein TusA family
AM365_RS23375	COG2925	Exonuclease
AM365_RS23380	COG1686	Belongs to the peptidase S11 family
AM365_RS23390	COG1289	transmembrane transporter activity
AM365_RS23400	COG4917	ethanolamine utilization protein
AM365_RS23435	COG2003	Belongs to the UPF0758 family
AM365_RS23465	COG2020	methyltransferase activity
AM365_RS23470	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS23490	COG2826	transposase and inactivated derivatives, IS30 family
AM365_RS23495	COG2963	transposase activity
AM365_RS23520	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
AM365_RS23535	COG1376	ErfK ybiS ycfS ynhG family protein
AM365_RS23545	COG0583	DNA-binding transcription factor activity
AM365_RS23550	COG0583	DNA-binding transcription factor activity
AM365_RS23560	COG0534	Mate efflux family protein
AM365_RS23580	COG0217	transcriptional regulatory protein
AM365_RS23585	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AM365_RS23590	COG0477	Major facilitator Superfamily
AM365_RS23600	COG1470	cell adhesion involved in biofilm formation
AM365_RS23600	COG1388	LysM domain
AM365_RS23620	COG3621	Patatin-like phospholipase
AM365_RS23710	COG3504	Conjugal transfer protein
AM365_RS23785	COG4771	TonB-dependent receptor
AM365_RS23790	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM365_RS23810	COG3433	isochorismatase activity
AM365_RS23810	COG2226	methyltransferase
AM365_RS23810	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM365_RS23825	COG1132	(ABC) transporter
AM365_RS23830	COG2814	Major facilitator Superfamily
AM365_RS23835	COG1169	isochorismate synthase
AM365_RS23840	COG0582	viral genome integration into host DNA
AM365_RS23870	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM365_RS23910	COG1396	sequence-specific DNA binding
AM365_RS23935	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AM365_RS23955	COG1403	HNH endonuclease
AM365_RS23960	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
AM365_RS24005	COG3772	lysozyme
AM365_RS24060	COG5301	cellulose 1,4-beta-cellobiosidase activity
AM365_RS24065	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AM365_RS24075	COG3038	cytochrome b561
AM365_RS24080	COG3443	Belongs to the bacterial solute-binding protein 9 family
AM365_RS24095	COG2351	hydroxyisourate hydrolase activity
AM365_RS24100	COG0745	RESPONSE REGULATOR receiver
AM365_RS24105	COG2205	protein histidine kinase activity
AM365_RS24120	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM365_RS24130	COG1418	mRNA catabolic process
AM365_RS24135	COG0270	DNA (cytosine-5-)-methyltransferase activity
AM365_RS24140	COG3727	T/G mismatch-specific endonuclease activity
AM365_RS24145	COG0697	spore germination
AM365_RS24150	COG2354	Protein conserved in bacteria
AM365_RS24155	COG5475	Uncharacterized small protein (DUF2158)
AM365_RS24165	COG3706	GGDEF domain
AM365_RS24190	COG2197	response regulator
AM365_RS24195	COG1684	flagellar biosynthetic protein fliR
AM365_RS24200	COG1987	bacterial-type flagellum assembly
AM365_RS24205	COG1338	Plays a role in the flagellum-specific transport system
AM365_RS24210	COG3190	flagellar
AM365_RS24215	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM365_RS24220	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM365_RS24225	COG1580	Controls the rotational direction of flagella during chemotaxis
AM365_RS24230	COG3144	bacterial-type flagellum assembly
AM365_RS24235	COG2882	bacterial-type flagellum organization
AM365_RS24240	COG1157	protein secretion by the type III secretion system
AM365_RS24245	COG1317	bacterial-type flagellum organization
AM365_RS24250	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM365_RS24255	COG1766	The M ring may be actively involved in energy transduction
AM365_RS24270	COG2135	peptidase activity
AM365_RS24275	COG0425	Belongs to the sulfur carrier protein TusA family
AM365_RS24280	COG2391	methyltransferase activity
AM365_RS24295	COG0366	Alpha amylase catalytic
AM365_RS24305	COG1516	flagellar protein fliS
AM365_RS24310	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AM365_RS24320	COG1191	sigma factor activity
AM365_RS24330	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM365_RS24340	COG0765	amino acid transport
AM365_RS24345	COG1126	abc transporter atp-binding protein
AM365_RS24350	COG2197	response regulator
AM365_RS24360	COG2197	response regulator
AM365_RS24390	COG3318	Belongs to the UPF0149 family
AM365_RS24390	COG3012	SEC-C Motif Domain Protein
AM365_RS24395	COG0814	amino acid
AM365_RS24405	COG1528	Iron-storage protein
AM365_RS24425	COG1528	Iron-storage protein
AM365_RS24435	COG1879	ABC-type sugar transport system periplasmic component
AM365_RS24440	COG1129	ABC transporter
AM365_RS24445	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM365_RS24450	COG1877	trehalose-phosphatase activity
AM365_RS24460	COG0589	response to stress
AM365_RS24475	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AM365_RS24480	COG1360	Flagellar Motor Protein
AM365_RS24485	COG0643	Histidine kinase
AM365_RS24485	COG2198	Histidine kinase
AM365_RS24490	COG0835	chemotaxis
AM365_RS24495	COG0840	transmembrane signaling receptor activity
AM365_RS24500	COG0840	transmembrane signaling receptor activity
AM365_RS24505	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AM365_RS24510	COG2201	protein-glutamate methylesterase activity
AM365_RS24515	COG0745	RESPONSE REGULATOR receiver
AM365_RS24520	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AM365_RS24525	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AM365_RS24530	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AM365_RS24540	COG3755	Protein conserved in bacteria
AM365_RS24555	COG3102	Protein conserved in bacteria
AM365_RS24565	COG3005	denitrification pathway
AM365_RS24570	COG0243	molybdopterin cofactor binding
AM365_RS24580	COG3547	Transposase (IS116 IS110 IS902 family)
AM365_RS24595	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AM365_RS24600	COG1801	Protein of unknown function DUF72
AM365_RS24605	COG1335	isochorismatase
AM365_RS24615	COG0494	nUDIX hydrolase
AM365_RS24620	COG0217	transcriptional regulatory protein
AM365_RS24650	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM365_RS24660	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AM365_RS24665	COG0739	heme binding
AM365_RS24670	COG1560	Kdo2-lipid A biosynthetic process
AM365_RS24675	COG0469	pyruvate kinase activity
AM365_RS24680	COG1737	Transcriptional regulator
AM365_RS24685	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AM365_RS24690	COG0129	dihydroxy-acid dehydratase activity
AM365_RS24695	COG0800	Aldolase
AM365_RS24705	COG3141	response to X-ray
AM365_RS24715	COG2979	Protein of unknown function (DUF533)
AM365_RS24725	COG1770	oligopeptidase
AM365_RS24730	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM365_RS24735	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM365_RS24745	COG2372	response to copper ion
AM365_RS24750	COG1276	copper resistance
AM365_RS24760	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AM365_RS24780	COG3008	intermembrane lipid transfer
AM365_RS24785	COG2995	paraquat-inducible protein a
AM365_RS24790	COG1956	GAF domain-containing protein
AM365_RS24800	COG0793	Belongs to the peptidase S41A family
AM365_RS24810	COG2814	Major facilitator Superfamily
AM365_RS24815	COG1414	Transcriptional regulator
AM365_RS24850	COG2226	methyltransferase
AM365_RS24870	COG3716	PTS system mannose fructose sorbose family IID component
AM365_RS24875	COG3715	PTS system
AM365_RS24880	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM365_RS24880	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS24895	COG1253	flavin adenine dinucleotide binding
AM365_RS24900	COG2200	EAL domain
AM365_RS24905	COG1760	l-serine dehydratase
AM365_RS24915	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AM365_RS24930	COG0251	oxidation-reduction process
AM365_RS24935	COG1199	ATP-dependent helicase activity
AM365_RS24940	COG1214	PFAM Peptidase M22, glycoprotease
AM365_RS24945	COG3065	identical protein binding
AM365_RS24950	COG0318	PFAM AMP-dependent synthetase and ligase
AM365_RS24955	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AM365_RS24960	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM365_RS24965	COG4638	Rieske (2fe-2S)
AM365_RS24970	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM365_RS24975	COG0473	3-isopropylmalate dehydrogenase activity
AM365_RS24980	COG0583	DNA-binding transcription factor activity
AM365_RS24990	COG3615	Tellurite resistance protein tehB
AM365_RS25005	COG0675	Transposase, IS605 OrfB family
AM365_RS25010	COG2261	transglycosylase associated protein
AM365_RS25025	COG2203	Gaf domain
AM365_RS25025	COG2199	diguanylate cyclase activity
AM365_RS25030	COG3042	response to heat
AM365_RS25035	COG3189	MarR family transcriptional regulator
AM365_RS25040	COG2807	transmembrane transport
AM365_RS25045	COG2207	Transcriptional regulator
AM365_RS25060	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM365_RS25065	COG2199	diguanylate cyclase activity
AM365_RS25070	COG2199	diguanylate cyclase activity
AM365_RS25080	COG2766	serine protein kinase
AM365_RS25085	COG3713	MltA-interacting MipA family protein
AM365_RS25090	COG0656	L-ascorbic acid biosynthetic process
AM365_RS25095	COG0676	glucose-6-phosphate 1-epimerase activity
AM365_RS25100	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM365_RS25110	COG3139	Protein of unknown function (DUF1315)
AM365_RS25115	COG1335	isochorismatase
AM365_RS25120	COG0252	asparaginase activity
AM365_RS25125	COG0616	signal peptide processing
AM365_RS25135	COG0778	Nitroreductase
AM365_RS25150	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM365_RS25160	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM365_RS25170	COG0494	nUDIX hydrolase
AM365_RS25175	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM365_RS25180	COG2897	thiosulfate sulfurtransferase activity
AM365_RS25185	COG4136	ATPase activity
AM365_RS25190	COG4135	transport system, permease component
AM365_RS25195	COG4134	Bacterial extracellular solute-binding protein
AM365_RS25200	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM365_RS25205	COG0398	Pfam SNARE associated Golgi protein
AM365_RS25215	COG0398	Pfam SNARE associated Golgi protein
AM365_RS25220	COG0708	Exodeoxyribonuclease III
AM365_RS25255	COG3678	ATP-independent chaperone mediated protein folding
AM365_RS25265	COG0322	excinuclease ABC activity
AM365_RS25275	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM365_RS25285	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM365_RS25290	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM365_RS25295	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM365_RS25300	COG2169	Transcriptional regulator
AM365_RS25300	COG1917	Cupin 2, conserved barrel domain protein
AM365_RS25305	COG1486	melibiose metabolic process
AM365_RS25315	COG0753	catalase activity
AM365_RS25330	COG1823	symporter activity
AM365_RS25335	COG1988	membrane-bound metal-dependent
AM365_RS25340	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM365_RS25350	COG3001	Fructosamine kinase
AM365_RS25360	COG1105	Belongs to the carbohydrate kinase PfkB family
AM365_RS25365	COG3137	Salt-induced outer membrane protein
AM365_RS25485	COG0859	PFAM glycosyl transferase family 9
AM365_RS25490	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AM365_RS25495	COG5301	cellulose 1,4-beta-cellobiosidase activity
AM365_RS25510	COG4695	Portal protein
AM365_RS25555	COG4974	Belongs to the 'phage' integrase family
AM365_RS25575	COG0386	Belongs to the glutathione peroxidase family
AM365_RS25585	COG0791	NLP P60 protein
AM365_RS25590	COG2200	EAL domain
AM365_RS25600	COG4256	Hemin uptake protein
AM365_RS25605	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM365_RS25620	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM365_RS25620	COG0574	Belongs to the PEP-utilizing enzyme family
AM365_RS25625	COG0318	PFAM AMP-dependent synthetase and ligase
AM365_RS25630	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AM365_RS25635	COG0644	oxidoreductase
AM365_RS25640	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AM365_RS25645	COG2086	electron transfer activity
AM365_RS25655	COG2207	Transcriptional regulator
AM365_RS25655	COG1917	Cupin 2, conserved barrel domain protein
AM365_RS25660	COG1960	acyl-CoA dehydrogenase activity
AM365_RS25665	COG4670	ketone body catabolic process
AM365_RS25680	COG2271	Major facilitator Superfamily
AM365_RS25685	COG0738	Major facilitator superfamily
AM365_RS25700	COG0628	permease
AM365_RS25710	COG0277	FAD linked oxidase domain protein
AM365_RS25710	COG0247	lactate metabolic process
AM365_RS25715	COG2050	protein possibly involved in aromatic compounds catabolism
AM365_RS25725	COG0316	Belongs to the HesB IscA family
AM365_RS25730	COG0719	Fe-S assembly protein
AM365_RS25735	COG0396	ATPase activity
AM365_RS25755	COG1376	ErfK ybiS ycfS ynhG family protein
AM365_RS25760	COG4238	major outer membrane lipoprotein
AM365_RS25765	COG0469	pyruvate kinase activity
AM365_RS25775	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS25780	COG2414	aldehyde ferredoxin oxidoreductase
AM365_RS25785	COG2414	aldehyde ferredoxin oxidoreductase
AM365_RS25795	COG0437	4 iron, 4 sulfur cluster binding
AM365_RS25800	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
AM365_RS25810	COG4529	Protein conserved in bacteria
AM365_RS25830	COG3468	outer membrane autotransporter barrel domain protein
AM365_RS25840	COG0307	riboflavin synthase, alpha
AM365_RS25845	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM365_RS25850	COG2814	Major facilitator Superfamily
AM365_RS25855	COG0583	DNA-binding transcription factor activity
AM365_RS25875	COG2814	Major facilitator Superfamily
AM365_RS25880	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM365_RS25885	COG0791	NLP P60 protein
AM365_RS25890	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AM365_RS25895	COG1201	RNA secondary structure unwinding
AM365_RS25905	COG0346	lactoylglutathione lyase activity
AM365_RS25910	COG1902	pentaerythritol trinitrate reductase activity
AM365_RS25915	COG1309	transcriptional regulator
AM365_RS25920	COG3313	Fe-S protein
AM365_RS25925	COG4989	oxidoreductase activity
AM365_RS25930	COG2032	superoxide dismutase activity
AM365_RS25935	COG1289	transmembrane transporter activity
AM365_RS25940	COG1566	PFAM secretion protein HlyD family protein
AM365_RS25955	COG3133	Outer membrane lipoprotein
AM365_RS25965	COG3895	Periplasmic Protein
AM365_RS25980	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AM365_RS25985	COG0625	glutathione transferase activity
AM365_RS25990	COG3104	oligopeptide transport
AM365_RS26000	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AM365_RS26010	COG4659	FMN binding
AM365_RS26055	COG0673	inositol 2-dehydrogenase activity
AM365_RS26065	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AM365_RS26070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM365_RS26070	COG1263	PTS System
AM365_RS26075	COG1609	Transcriptional regulator
AM365_RS26080	COG1028	Short-chain dehydrogenase reductase Sdr
AM365_RS26085	COG1309	transcriptional regulator
AM365_RS26090	COG3250	beta-galactosidase activity
AM365_RS26100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM365_RS26175	COG1525	nuclease
AM365_RS26235	COG0616	signal peptide processing
AM365_RS26400	COG1324	tolerance protein
AM365_RS26405	COG0673	inositol 2-dehydrogenase activity
AM365_RS26445	COG4974	Belongs to the 'phage' integrase family
AM365_RS26575	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AM365_RS26730	COG0633	Ferredoxin
AM365_RS26765	COG0629	single-stranded DNA binding
AM365_RS26775	COG0714	Associated with various cellular activities
AM365_RS26790	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM365_RS26880	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM365_RS26970	COG1192	Involved in chromosome partitioning
AM365_RS27110	COG2003	Belongs to the UPF0758 family
AM365_RS27170	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM365_RS27185	COG4372	Transposase
AM365_RS27190	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM365_RS27300	COG0741	lytic transglycosylase activity
AM365_RS27395	COG4644	lycopene metabolic process
AM365_RS27455	COG3039	Transposase
AM365_RS27465	COG2135	peptidase activity
AM365_RS27530	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM365_RS27590	COG3436	PFAM IS66 Orf2 family protein
AM365_RS27595	COG4372	Transposase
AM365_RS27605	COG1196	nuclear chromosome segregation
AM365_RS27650	COG1192	Involved in chromosome partitioning
AM365_RS27720	COG0675	Transposase, IS605 OrfB family
AM365_RS27750	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM365_RS27770	COG5301	cellulose 1,4-beta-cellobiosidase activity
AM365_RS27905	COG1192	Involved in chromosome partitioning
AM365_RS27930	COG2974	May be involved in recombination
AM365_RS27955	COG3549	Plasmid maintenance system killer
AM365_RS27960	COG3093	addiction module antidote protein HigA
AM365_RS28040	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AM365_RS28065	COG1403	HNH endonuclease
AM365_RS28115	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM365_RS28140	COG0756	dUTP diphosphatase activity