AM365_RS00035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS00035	SM00387	Histidine kinase-like ATPases
AM365_RS00035	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS00040	SM00448	cheY-homologous receiver domain
AM365_RS00040	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS00070	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AM365_RS00070	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AM365_RS00155	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS00195	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS00230	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS00290	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS00350	SM00507	HNH nucleases
AM365_RS00440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS00440	SM00895	AM365_RS00440
AM365_RS00475	SM00267	diguanylate cyclase
AM365_RS00495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS00495	SM00866	AM365_RS00495
AM365_RS00530	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS00535	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM365_RS00585	SM00267	diguanylate cyclase
AM365_RS00620	SM01133	AM365_RS00620
AM365_RS00640	SM00382	ATPases associated with a variety of cellular activities
AM365_RS00655	SM00869	Autotransporter beta-domain
AM365_RS00660	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS00725	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS00750	SM00382	ATPases associated with a variety of cellular activities
AM365_RS00785	SM00267	diguanylate cyclase
AM365_RS00790	SM00052	Putative diguanylate phosphodiesterase
AM365_RS00790	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM365_RS00790	SM00091	PAS domain
AM365_RS00790	SM00267	diguanylate cyclase
AM365_RS00815	SM00382	ATPases associated with a variety of cellular activities
AM365_RS00820	SM00382	ATPases associated with a variety of cellular activities
AM365_RS00845	SM00919	Malic enzyme, NAD binding domain
AM365_RS00845	SM01274	AM365_RS00845
AM365_RS00850	SM00829	Enoylreductase
AM365_RS00855	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS00905	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS00935	SM00903	Flavin reductase like domain
AM365_RS00995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS00995	SM00895	AM365_RS00995
AM365_RS01000	SM00829	Enoylreductase
AM365_RS01060	SM00382	ATPases associated with a variety of cellular activities
AM365_RS01070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS01075	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS01095	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS01160	SM01150	AM365_RS01160
AM365_RS01170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM365_RS01170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS01170	SM00319	Homologues of the ligand binding domain of Tar
AM365_RS01190	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM365_RS01205	SM00382	ATPases associated with a variety of cellular activities
AM365_RS01205	SM00487	DEAD-like helicases superfamily
AM365_RS01205	SM00490	helicase superfamily c-terminal domain
AM365_RS01205	SM00847	Helicase associated domain (HA2)  Add an annotation
AM365_RS01215	SM00195	Dual specificity phosphatase, catalytic domain
AM365_RS01215	SM00404	Protein tyrosine phosphatase, catalytic domain motif
AM365_RS01270	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS01305	SM00890	Domain of unknown function
AM365_RS01330	SM00857	Resolvase, N terminal domain
AM365_RS01420	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS01495	SM00487	DEAD-like helicases superfamily
AM365_RS01495	SM00490	helicase superfamily c-terminal domain
AM365_RS01510	SM00091	PAS domain
AM365_RS01510	SM00267	diguanylate cyclase
AM365_RS01515	SM00463	Small MutS-related domain
AM365_RS01550	SM00100	Cyclic nucleotide-monophosphate binding domain
AM365_RS01550	SM00419	helix_turn_helix, cAMP Regulatory protein
AM365_RS01600	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS01610	SM00091	PAS domain
AM365_RS01610	SM00382	ATPases associated with a variety of cellular activities
AM365_RS01625	SM00354	helix_turn _helix lactose operon repressor
AM365_RS01635	SM00382	ATPases associated with a variety of cellular activities
AM365_RS01680	SM00642	Alpha-amylase domain
AM365_RS01685	SM00450	Rhodanese Homology Domain
AM365_RS01710	SM00382	ATPases associated with a variety of cellular activities
AM365_RS01735	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS01745	SM01230	AM365_RS01745
AM365_RS01780	SM00382	ATPases associated with a variety of cellular activities
AM365_RS01785	SM00382	ATPases associated with a variety of cellular activities
AM365_RS01810	SM00357	Cold shock protein domain
AM365_RS01810	SM00955	AM365_RS01810
AM365_RS01820	SM00052	Putative diguanylate phosphodiesterase
AM365_RS01820	SM00091	PAS domain
AM365_RS01820	SM00267	diguanylate cyclase
AM365_RS01830	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS01830	SM01134	AM365_RS01830
AM365_RS01845	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM365_RS01850	SM00028	Tetratricopeptide repeats
AM365_RS01860	SM00014	Acid phosphatase homologues
AM365_RS01900	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM365_RS01900	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM365_RS01900	SM00493	AM365_RS01900
AM365_RS01920	SM00822	AM365_RS01920
AM365_RS01930	SM00363	S4 RNA-binding domain
AM365_RS01940	SM00481	DNA polymerase alpha chain like domain
AM365_RS02025	SM00857	Resolvase, N terminal domain
AM365_RS02265	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS02270	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS02330	SM00155	Phospholipase D. Active site motifs.
AM365_RS02340	SM00382	ATPases associated with a variety of cellular activities
AM365_RS02345	SM00382	ATPases associated with a variety of cellular activities
AM365_RS02390	SM00528	Domain in histone-like proteins of HNS family
AM365_RS02400	SM00448	cheY-homologous receiver domain
AM365_RS02460	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS02475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS02475	SM00387	Histidine kinase-like ATPases
AM365_RS02480	SM00421	helix_turn_helix, Lux Regulon
AM365_RS02480	SM00448	cheY-homologous receiver domain
AM365_RS02550	SM00937	AM365_RS02550
AM365_RS02570	SM01400	AM365_RS02570
AM365_RS02625	SM00382	ATPases associated with a variety of cellular activities
AM365_RS02770	SM00869	Autotransporter beta-domain
AM365_RS02775	SM00091	PAS domain
AM365_RS02775	SM00382	ATPases associated with a variety of cellular activities
AM365_RS02785	SM01120	AM365_RS02785
AM365_RS02835	SM01091	Transporter associated domain
AM365_RS02840	SM01005	Alanine racemase, C-terminal domain
AM365_RS02855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS02970	SM00869	Autotransporter beta-domain
AM365_RS02990	SM00052	Putative diguanylate phosphodiesterase
AM365_RS03015	SM00052	Putative diguanylate phosphodiesterase
AM365_RS03015	SM01034	Sensors of blue-light using FAD
AM365_RS03020	SM00422	helix_turn_helix, mercury resistance
AM365_RS03035	SM01329	AM365_RS03035
AM365_RS03065	SM00448	cheY-homologous receiver domain
AM365_RS03065	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS03070	SM00387	Histidine kinase-like ATPases
AM365_RS03075	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AM365_RS03090	SM00382	ATPases associated with a variety of cellular activities
AM365_RS03135	SM00382	ATPases associated with a variety of cellular activities
AM365_RS03150	SM00487	DEAD-like helicases superfamily
AM365_RS03150	SM00490	helicase superfamily c-terminal domain
AM365_RS03150	SM00982	AM365_RS03150
AM365_RS03150	SM01058	CarD-like/TRCF domain
AM365_RS03155	SM00257	Lysin motif
AM365_RS03250	SM00825	Beta-ketoacyl synthase
AM365_RS03260	SM00822	AM365_RS03260
AM365_RS03265	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM365_RS03295	SM00363	S4 RNA-binding domain
AM365_RS03305	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS03320	SM00047	Lysozyme subfamily 2
AM365_RS03365	SM00858	AM365_RS03365
AM365_RS03445	SM00867	YceI-like domain 
AM365_RS03450	SM00450	Rhodanese Homology Domain
AM365_RS03500	SM00155	Phospholipase D. Active site motifs.
AM365_RS03505	SM00506	Appr-1"-p processing enzyme
AM365_RS03540	SM00421	helix_turn_helix, Lux Regulon
AM365_RS03570	SM00481	DNA polymerase alpha chain like domain
AM365_RS03605	SM00267	diguanylate cyclase
AM365_RS03610	SM00028	Tetratricopeptide repeats
AM365_RS03715	SM00903	Flavin reductase like domain
AM365_RS03755	SM00271	DnaJ molecular chaperone homology domain
AM365_RS03780	SM00448	cheY-homologous receiver domain
AM365_RS03780	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS03790	SM00073	Histidine Phosphotransfer domain
AM365_RS03790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS03790	SM00387	Histidine kinase-like ATPases
AM365_RS03790	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS03790	SM00448	cheY-homologous receiver domain
AM365_RS03815	SM00357	Cold shock protein domain
AM365_RS03820	SM00357	Cold shock protein domain
AM365_RS03850	SM00226	Low molecular weight phosphatase family
AM365_RS03930	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM365_RS03935	SM00992	Hemimethylated DNA-binding protein YccV like
AM365_RS03940	SM00881	CoA binding domain
AM365_RS03950	SM00851	MGS-like domain
AM365_RS04025	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04030	SM00981	AM365_RS04030
AM365_RS04095	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS04110	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04155	SM00849	Metallo-beta-lactamase superfamily
AM365_RS04225	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04230	SM00849	Metallo-beta-lactamase superfamily
AM365_RS04235	SM00411	bacterial (prokaryotic) histone like domain
AM365_RS04240	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS04325	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS04335	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04345	SM00843	AM365_RS04345
AM365_RS04350	SM00344	helix_turn_helix ASNC type
AM365_RS04365	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04370	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04385	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS04395	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04395	SM01086	C-terminal, D2-small domain, of ClpB protein
AM365_RS04405	SM00357	Cold shock protein domain
AM365_RS04410	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04475	SM00644	AM365_RS04475
AM365_RS04490	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04495	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS04495	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM365_RS04510	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS04510	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM365_RS04535	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04610	SM00014	Acid phosphatase homologues
AM365_RS04615	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS04615	SM01134	AM365_RS04615
AM365_RS04620	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM365_RS04640	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS04645	SM00267	diguanylate cyclase
AM365_RS04650	SM00052	Putative diguanylate phosphodiesterase
AM365_RS04670	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04680	SM00852	Probable molybdopterin binding domain
AM365_RS04725	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04740	SM00529	Helix-turn-helix diphteria tox regulatory element
AM365_RS04785	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS04785	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM365_RS04795	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04820	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM365_RS04845	SM00487	DEAD-like helicases superfamily
AM365_RS04845	SM00488	AM365_RS04845
AM365_RS04845	SM00491	AM365_RS04845
AM365_RS04860	SM00487	DEAD-like helicases superfamily
AM365_RS04860	SM00490	helicase superfamily c-terminal domain
AM365_RS04875	SM00382	ATPases associated with a variety of cellular activities
AM365_RS04900	SM00155	Phospholipase D. Active site motifs.
AM365_RS04940	SM00852	Probable molybdopterin binding domain
AM365_RS04945	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS04955	SM00487	DEAD-like helicases superfamily
AM365_RS04955	SM00490	helicase superfamily c-terminal domain
AM365_RS04975	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS04975	SM00876	Biotin and Thiamin Synthesis associated domain
AM365_RS05030	SM00382	ATPases associated with a variety of cellular activities
AM365_RS05060	SM00382	ATPases associated with a variety of cellular activities
AM365_RS05085	SM00855	Phosphoglycerate mutase family
AM365_RS05220	SM00872	Alpha mannosidase, middle domain
AM365_RS05230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS05230	SM00866	AM365_RS05230
AM365_RS05235	SM00881	CoA binding domain
AM365_RS05250	SM00861	Transketolase, pyrimidine binding domain
AM365_RS05315	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM365_RS05315	SM01232	AM365_RS05315
AM365_RS05325	SM00797	Allophanate hydrolase subunit 2
AM365_RS05330	SM00796	Allophanate hydrolase subunit 1
AM365_RS05405	SM00387	Histidine kinase-like ATPases
AM365_RS05405	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS05410	SM00448	cheY-homologous receiver domain
AM365_RS05410	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS05565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS05580	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM365_RS05580	SM01091	Transporter associated domain
AM365_RS05600	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS05615	SM00382	ATPases associated with a variety of cellular activities
AM365_RS05640	SM00671	Sel1-like repeats.
AM365_RS05645	SM00271	DnaJ molecular chaperone homology domain
AM365_RS05655	SM00671	Sel1-like repeats.
AM365_RS05685	SM00855	Phosphoglycerate mutase family
AM365_RS05715	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM365_RS05745	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS05765	SM00357	Cold shock protein domain
AM365_RS05785	SM00448	cheY-homologous receiver domain
AM365_RS05790	SM00091	PAS domain
AM365_RS05790	SM00387	Histidine kinase-like ATPases
AM365_RS05795	SM00764	Citrate lyase ligase C-terminal domain
AM365_RS05885	SM00470	ParB-like nuclease domain
AM365_RS05915	SM00822	AM365_RS05915
AM365_RS05955	SM00382	ATPases associated with a variety of cellular activities
AM365_RS05965	SM00823	Phosphopantetheine attachment site
AM365_RS05965	SM00824	Thioesterase
AM365_RS05970	SM00923	MbtH-like protein
AM365_RS06070	SM00448	cheY-homologous receiver domain
AM365_RS06070	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS06075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS06075	SM00387	Histidine kinase-like ATPases
AM365_RS06075	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS06120	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS06140	SM00421	helix_turn_helix, Lux Regulon
AM365_RS06140	SM00448	cheY-homologous receiver domain
AM365_RS06185	SM00840	AM365_RS06185
AM365_RS06205	SM01001	AIR carboxylase
AM365_RS06285	SM00346	helix_turn_helix isocitrate lyase regulation
AM365_RS06300	SM00450	Rhodanese Homology Domain
AM365_RS06335	SM00382	ATPases associated with a variety of cellular activities
AM365_RS06345	SM00822	AM365_RS06345
AM365_RS06360	SM00382	ATPases associated with a variety of cellular activities
AM365_RS06365	SM00244	prohibitin homologues
AM365_RS06375	SM00422	helix_turn_helix, mercury resistance
AM365_RS06400	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS06465	SM00387	Histidine kinase-like ATPases
AM365_RS06470	SM00493	AM365_RS06470
AM365_RS06480	SM00382	ATPases associated with a variety of cellular activities
AM365_RS06545	SM01266	AM365_RS06545
AM365_RS06555	SM00052	Putative diguanylate phosphodiesterase
AM365_RS06590	SM00938	Nitrogen regulatory protein P-II
AM365_RS06595	SM00382	ATPases associated with a variety of cellular activities
AM365_RS06600	SM00382	ATPases associated with a variety of cellular activities
AM365_RS06605	SM00344	helix_turn_helix ASNC type
AM365_RS06630	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM365_RS06640	SM00411	bacterial (prokaryotic) histone like domain
AM365_RS06645	SM00382	ATPases associated with a variety of cellular activities
AM365_RS06645	SM00464	Found in ATP-dependent protease La (LON)
AM365_RS06650	SM00382	ATPases associated with a variety of cellular activities
AM365_RS06650	SM00994	ClpX C4-type zinc finger
AM365_RS06650	SM01086	C-terminal, D2-small domain, of ClpB protein
AM365_RS06725	SM00671	Sel1-like repeats.
AM365_RS06750	SM00981	AM365_RS06750
AM365_RS06765	SM00861	Transketolase, pyrimidine binding domain
AM365_RS06815	SM00507	HNH nucleases
AM365_RS06830	SM01323	AM365_RS06830
AM365_RS06850	SM00642	Alpha-amylase domain
AM365_RS06865	SM00091	PAS domain
AM365_RS06865	SM00387	Histidine kinase-like ATPases
AM365_RS06865	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS06870	SM00448	cheY-homologous receiver domain
AM365_RS06870	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS06945	SM00267	diguanylate cyclase
AM365_RS06955	SM00098	Alkaline phosphatase homologues
AM365_RS07010	SM00869	Autotransporter beta-domain
AM365_RS07020	SM01004	Delta-aminolevulinic acid dehydratase
AM365_RS07035	SM00382	ATPases associated with a variety of cellular activities
AM365_RS07040	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS07075	SM00829	Enoylreductase
AM365_RS07115	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM365_RS07140	SM00346	helix_turn_helix isocitrate lyase regulation
AM365_RS07145	SM00354	helix_turn _helix lactose operon repressor
AM365_RS07155	SM01038	Beta galactosidase small chain
AM365_RS07165	SM01266	AM365_RS07165
AM365_RS07175	SM01116	AM365_RS07175
AM365_RS07180	SM00947	Carbonic anhydrase
AM365_RS07220	SM00382	ATPases associated with a variety of cellular activities
AM365_RS07245	SM00829	Enoylreductase
AM365_RS07260	SM00382	ATPases associated with a variety of cellular activities
AM365_RS07270	SM01022	AM365_RS07270
AM365_RS07300	SM00248	ankyrin repeats
AM365_RS07320	SM00052	Putative diguanylate phosphodiesterase
AM365_RS07320	SM00421	helix_turn_helix, Lux Regulon
AM365_RS07325	SM00869	Autotransporter beta-domain
AM365_RS07360	SM00421	helix_turn_helix, Lux Regulon
AM365_RS07370	SM00869	Autotransporter beta-domain
AM365_RS07405	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS07435	SM00634	Bacterial Ig-like domain (group 1)
AM365_RS07475	SM00421	helix_turn_helix, Lux Regulon
AM365_RS07535	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM365_RS07600	SM00857	Resolvase, N terminal domain
AM365_RS07640	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS07650	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS07775	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM365_RS07880	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS07980	SM00382	ATPases associated with a variety of cellular activities
AM365_RS08005	SM00382	ATPases associated with a variety of cellular activities
AM365_RS08175	SM00479	AM365_RS08175
AM365_RS08190	SM00849	Metallo-beta-lactamase superfamily
AM365_RS08195	SM00257	Lysin motif
AM365_RS08260	SM00382	ATPases associated with a variety of cellular activities
AM365_RS08260	SM00930	AM365_RS08260
AM365_RS08315	SM01322	AM365_RS08315
AM365_RS08330	SM00977	TilS substrate C-terminal domain
AM365_RS08350	SM00481	DNA polymerase alpha chain like domain
AM365_RS08380	SM00935	Outer membrane protein (OmpH-like)
AM365_RS08390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM365_RS08445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM365_RS08465	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM365_RS08475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM365_RS08520	SM00382	ATPases associated with a variety of cellular activities
AM365_RS08540	SM00487	DEAD-like helicases superfamily
AM365_RS08540	SM00490	helicase superfamily c-terminal domain
AM365_RS08540	SM00847	Helicase associated domain (HA2)  Add an annotation
AM365_RS08655	SM00382	ATPases associated with a variety of cellular activities
AM365_RS08660	SM00947	Carbonic anhydrase
AM365_RS08670	SM00564	beta-propeller repeat
AM365_RS08735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS08735	SM00895	AM365_RS08735
AM365_RS08750	SM00644	AM365_RS08750
AM365_RS08780	SM01240	AM365_RS08780
AM365_RS08805	SM00957	SecA DEAD-like domain
AM365_RS08805	SM00958	SecA preprotein cross-linking domain
AM365_RS08820	SM00864	Tubulin/FtsZ family, GTPase domain
AM365_RS08820	SM00865	Tubulin/FtsZ family, C-terminal domain
AM365_RS08825	SM00842	Cell division protein FtsA
AM365_RS08900	SM00354	helix_turn _helix lactose operon repressor
AM365_RS08930	SM00917	LeuA allosteric (dimerisation) domain
AM365_RS08935	SM01329	AM365_RS08935
AM365_RS08975	SM00382	ATPases associated with a variety of cellular activities
AM365_RS08985	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS09005	SM01007	Class II Aldolase and Adducin N-terminal domain
AM365_RS09010	SM00486	DNA polymerase type-B family
AM365_RS09015	SM00487	DEAD-like helicases superfamily
AM365_RS09015	SM00490	helicase superfamily c-terminal domain
AM365_RS09025	SM00271	DnaJ molecular chaperone homology domain
AM365_RS09045	SM00650	Ribosomal RNA adenine dimethylases
AM365_RS09090	SM00893	Electron transfer flavoprotein domain
AM365_RS09095	SM00893	Electron transfer flavoprotein domain
AM365_RS09140	SM00851	MGS-like domain
AM365_RS09140	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AM365_RS09145	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AM365_RS09185	SM00904	Riboflavin kinase
AM365_RS09235	SM00271	DnaJ molecular chaperone homology domain
AM365_RS09260	SM00852	Probable molybdopterin binding domain
AM365_RS09315	SM00448	cheY-homologous receiver domain
AM365_RS09315	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS09325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS09325	SM00387	Histidine kinase-like ATPases
AM365_RS09325	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS09330	SM00448	cheY-homologous receiver domain
AM365_RS09330	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS09340	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS09340	SM00871	Bacterial transcription activator, effector binding domain
AM365_RS09345	SM00855	Phosphoglycerate mutase family
AM365_RS09370	SM00382	ATPases associated with a variety of cellular activities
AM365_RS09375	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS09380	SM00382	ATPases associated with a variety of cellular activities
AM365_RS09410	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AM365_RS09415	SM01133	AM365_RS09415
AM365_RS09445	SM00749	bacterial OsmY and nodulation domain
AM365_RS09500	SM00421	helix_turn_helix, Lux Regulon
AM365_RS09505	SM00421	helix_turn_helix, Lux Regulon
AM365_RS09525	SM00382	ATPases associated with a variety of cellular activities
AM365_RS09540	SM00829	Enoylreductase
AM365_RS09545	SM00895	AM365_RS09545
AM365_RS09555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM365_RS09555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS09555	SM00319	Homologues of the ligand binding domain of Tar
AM365_RS09560	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM365_RS09600	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS09610	SM00903	Flavin reductase like domain
AM365_RS09630	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM365_RS09645	SM00487	DEAD-like helicases superfamily
AM365_RS09675	SM01059	Chloramphenicol acetyltransferase
AM365_RS09695	SM00857	Resolvase, N terminal domain
AM365_RS09925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS09925	SM00895	AM365_RS09925
AM365_RS10045	SM00382	ATPases associated with a variety of cellular activities
AM365_RS10090	SM00220	Serine/Threonine protein kinases, catalytic domain
AM365_RS10110	SM00829	Enoylreductase
AM365_RS10185	SM00822	AM365_RS10185
AM365_RS10220	SM00831	Cation transporter/ATPase, N-terminus
AM365_RS10225	SM00354	helix_turn _helix lactose operon repressor
AM365_RS10235	SM00642	Alpha-amylase domain
AM365_RS10285	SM00382	ATPases associated with a variety of cellular activities
AM365_RS10305	SM00966	SpoVT / AbrB like domain 
AM365_RS10345	SM01091	Transporter associated domain
AM365_RS10430	SM00882	Coenzyme A transferase
AM365_RS10480	SM01007	Class II Aldolase and Adducin N-terminal domain
AM365_RS10490	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM365_RS10515	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS10515	SM01134	AM365_RS10515
AM365_RS10575	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM365_RS10580	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS10580	SM00357	Cold shock protein domain
AM365_RS10580	SM00955	AM365_RS10580
AM365_RS10590	SM00788	Adenylosuccinate synthetase
AM365_RS10600	SM00244	prohibitin homologues
AM365_RS10605	SM00244	prohibitin homologues
AM365_RS10625	SM00853	MutL C terminal dimerisation domain
AM365_RS10625	SM01340	AM365_RS10625
AM365_RS10630	SM00646	AM365_RS10630
AM365_RS10665	SM00479	AM365_RS10665
AM365_RS10750	SM00841	Elongation factor P, C-terminal
AM365_RS10750	SM01185	AM365_RS10750
AM365_RS10775	SM00883	Chaperonin 10 Kd subunit
AM365_RS10865	SM00487	DEAD-like helicases superfamily
AM365_RS10865	SM00490	helicase superfamily c-terminal domain
AM365_RS10885	SM00470	ParB-like nuclease domain
AM365_RS10980	SM00877	AM365_RS10980
AM365_RS10985	SM00877	AM365_RS10985
AM365_RS10995	SM00877	AM365_RS10995
AM365_RS11045	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS11045	SM00448	cheY-homologous receiver domain
AM365_RS11055	SM00877	AM365_RS11055
AM365_RS11175	SM00382	ATPases associated with a variety of cellular activities
AM365_RS11330	SM00091	PAS domain
AM365_RS11330	SM00387	Histidine kinase-like ATPases
AM365_RS11335	SM00448	cheY-homologous receiver domain
AM365_RS11375	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS11385	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS11400	SM00448	cheY-homologous receiver domain
AM365_RS11400	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS11405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS11405	SM00387	Histidine kinase-like ATPases
AM365_RS11405	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS11445	SM00382	ATPases associated with a variety of cellular activities
AM365_RS11460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS11460	SM00866	AM365_RS11460
AM365_RS11485	SM00382	ATPases associated with a variety of cellular activities
AM365_RS11490	SM00382	ATPases associated with a variety of cellular activities
AM365_RS11500	SM00072	Guanylate kinase homologues.
AM365_RS11525	SM00849	Metallo-beta-lactamase superfamily
AM365_RS11555	SM00671	Sel1-like repeats.
AM365_RS11570	SM00028	Tetratricopeptide repeats
AM365_RS11655	SM00422	helix_turn_helix, mercury resistance
AM365_RS11660	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS11665	SM00052	Putative diguanylate phosphodiesterase
AM365_RS11715	SM01005	Alanine racemase, C-terminal domain
AM365_RS11720	SM00382	ATPases associated with a variety of cellular activities
AM365_RS11725	SM00829	Enoylreductase
AM365_RS11770	SM00563	Phosphate acyltransferases
AM365_RS11810	SM00382	ATPases associated with a variety of cellular activities
AM365_RS11900	SM00244	prohibitin homologues
AM365_RS11910	SM00363	S4 RNA-binding domain
AM365_RS11925	SM01018	B12 binding domain
AM365_RS11930	SM00346	helix_turn_helix isocitrate lyase regulation
AM365_RS11990	SM00798	AICARFT/IMPCHase bienzyme
AM365_RS11990	SM00851	MGS-like domain
AM365_RS11995	SM01209	AM365_RS11995
AM365_RS11995	SM01210	AM365_RS11995
AM365_RS12000	SM00382	ATPases associated with a variety of cellular activities
AM365_RS12000	SM00448	cheY-homologous receiver domain
AM365_RS12005	SM00387	Histidine kinase-like ATPases
AM365_RS12005	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS12025	SM00411	bacterial (prokaryotic) histone like domain
AM365_RS12080	SM00876	Biotin and Thiamin Synthesis associated domain
AM365_RS12090	SM00663	RNA polymerase I subunit A N-terminus
AM365_RS12120	SM00649	Ribosomal protein L11/L12
AM365_RS12125	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM365_RS12125	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM365_RS12250	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS12270	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM365_RS12290	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS12400	SM00487	DEAD-like helicases superfamily
AM365_RS12400	SM00490	helicase superfamily c-terminal domain
AM365_RS12405	SM00354	helix_turn _helix lactose operon repressor
AM365_RS12420	SM00382	ATPases associated with a variety of cellular activities
AM365_RS12420	SM01086	C-terminal, D2-small domain, of ClpB protein
AM365_RS12555	SM00857	Resolvase, N terminal domain
AM365_RS12710	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS12725	SM00448	cheY-homologous receiver domain
AM365_RS12725	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS12730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS12730	SM00387	Histidine kinase-like ATPases
AM365_RS12730	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS12775	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS12780	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS12795	SM01007	Class II Aldolase and Adducin N-terminal domain
AM365_RS12850	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS12890	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS12940	SM00829	Enoylreductase
AM365_RS12945	SM01133	AM365_RS12945
AM365_RS12960	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS12960	SM01134	AM365_RS12960
AM365_RS12980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS12980	SM00866	AM365_RS12980
AM365_RS12995	SM01230	AM365_RS12995
AM365_RS13005	SM00091	PAS domain
AM365_RS13005	SM00387	Histidine kinase-like ATPases
AM365_RS13005	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS13010	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13010	SM00448	cheY-homologous receiver domain
AM365_RS13020	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS13035	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM365_RS13035	SM00474	3'-5' exonuclease
AM365_RS13035	SM00475	5'-3' exonuclease
AM365_RS13035	SM00482	DNA polymerase A domain
AM365_RS13045	SM00563	Phosphate acyltransferases
AM365_RS13145	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM365_RS13235	SM00341	Helicase and RNase D C-terminal
AM365_RS13235	SM00487	DEAD-like helicases superfamily
AM365_RS13235	SM00490	helicase superfamily c-terminal domain
AM365_RS13235	SM00956	AM365_RS13235
AM365_RS13335	SM01219	AM365_RS13335
AM365_RS13435	SM00984	UDP binding domain
AM365_RS13460	SM00357	Cold shock protein domain
AM365_RS13460	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13460	SM00959	Rho termination factor, N-terminal domain
AM365_RS13475	SM00487	DEAD-like helicases superfamily
AM365_RS13475	SM00490	helicase superfamily c-terminal domain
AM365_RS13545	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS13590	SM00895	AM365_RS13590
AM365_RS13600	SM00354	helix_turn _helix lactose operon repressor
AM365_RS13620	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13635	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13640	SM00327	von Willebrand factor (vWF) type A domain
AM365_RS13650	SM00344	helix_turn_helix ASNC type
AM365_RS13660	SM01228	AM365_RS13660
AM365_RS13705	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13765	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13775	SM01061	CAT RNA binding domain
AM365_RS13870	SM01234	AM365_RS13870
AM365_RS13890	SM00382	ATPases associated with a variety of cellular activities
AM365_RS13890	SM00760	Bacterial dnaA protein helix-turn-helix domain
AM365_RS13895	SM00480	DNA polymerase III beta subunit
AM365_RS13905	SM00387	Histidine kinase-like ATPases
AM365_RS13905	SM00433	TopoisomeraseII
AM365_RS13925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS13925	SM00895	AM365_RS13925
AM365_RS13940	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS13980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS13980	SM00866	AM365_RS13980
AM365_RS13995	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS14075	SM00421	helix_turn_helix, Lux Regulon
AM365_RS14075	SM00448	cheY-homologous receiver domain
AM365_RS14080	SM00387	Histidine kinase-like ATPases
AM365_RS14205	SM00382	ATPases associated with a variety of cellular activities
AM365_RS14285	SM00487	DEAD-like helicases superfamily
AM365_RS14285	SM00490	helicase superfamily c-terminal domain
AM365_RS14295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM365_RS14295	SM00954	Region found in RelA / SpoT proteins
AM365_RS14300	SM01409	AM365_RS14300
AM365_RS14305	SM00072	Guanylate kinase homologues.
AM365_RS14310	SM00532	Ligase N family
AM365_RS14375	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM365_RS14375	SM01232	AM365_RS14375
AM365_RS14455	SM00829	Enoylreductase
AM365_RS14485	SM00450	Rhodanese Homology Domain
AM365_RS14505	SM00971	Serine acetyltransferase, N-terminal
AM365_RS14520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS14520	SM00895	AM365_RS14520
AM365_RS14665	SM01007	Class II Aldolase and Adducin N-terminal domain
AM365_RS14675	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM365_RS14710	SM00346	helix_turn_helix isocitrate lyase regulation
AM365_RS14725	SM00642	Alpha-amylase domain
AM365_RS14730	SM00047	Lysozyme subfamily 2
AM365_RS14735	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS14745	SM00382	ATPases associated with a variety of cellular activities
AM365_RS14800	SM00357	Cold shock protein domain
AM365_RS14805	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS14920	SM00382	ATPases associated with a variety of cellular activities
AM365_RS14925	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15010	SM00028	Tetratricopeptide repeats
AM365_RS15015	SM00052	Putative diguanylate phosphodiesterase
AM365_RS15015	SM00267	diguanylate cyclase
AM365_RS15050	SM00052	Putative diguanylate phosphodiesterase
AM365_RS15075	SM00421	helix_turn_helix, Lux Regulon
AM365_RS15095	SM01235	AM365_RS15095
AM365_RS15105	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS15110	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS15160	SM00421	helix_turn_helix, Lux Regulon
AM365_RS15185	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM365_RS15200	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM365_RS15290	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15315	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15320	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15395	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15395	SM00962	SRP54-type protein, GTPase domain
AM365_RS15395	SM00963	SRP54-type protein, helical bundle domain
AM365_RS15400	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15445	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15450	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15470	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15530	SM00354	helix_turn _helix lactose operon repressor
AM365_RS15550	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM365_RS15555	SM00642	Alpha-amylase domain
AM365_RS15560	SM00642	Alpha-amylase domain
AM365_RS15605	SM00450	Rhodanese Homology Domain
AM365_RS15615	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS15615	SM01134	AM365_RS15615
AM365_RS15620	SM00382	ATPases associated with a variety of cellular activities
AM365_RS15635	SM00421	helix_turn_helix, Lux Regulon
AM365_RS15690	SM00899	AM365_RS15690
AM365_RS15700	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS15700	SM00732	Likely ribonuclease with RNase H fold.
AM365_RS15715	SM00448	cheY-homologous receiver domain
AM365_RS15715	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS15720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS15720	SM00387	Histidine kinase-like ATPases
AM365_RS15720	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS15745	SM00363	S4 RNA-binding domain
AM365_RS15790	SM00965	Secretin and TonB N terminus short domain
AM365_RS15935	SM00100	Cyclic nucleotide-monophosphate binding domain
AM365_RS15935	SM00419	helix_turn_helix, cAMP Regulatory protein
AM365_RS15965	SM00382	ATPases associated with a variety of cellular activities
AM365_RS16035	SM00838	Elongation factor G C-terminus
AM365_RS16035	SM00889	Elongation factor G, domain IV
AM365_RS16070	SM01403	AM365_RS16070
AM365_RS16090	SM01382	AM365_RS16090
AM365_RS16090	SM01383	AM365_RS16090
AM365_RS16105	SM00322	K homology RNA-binding domain
AM365_RS16125	SM01374	AM365_RS16125
AM365_RS16130	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM365_RS16195	SM00363	S4 RNA-binding domain
AM365_RS16195	SM01390	AM365_RS16195
AM365_RS16200	SM00662	RNA polymerases D
AM365_RS16215	SM00422	helix_turn_helix, mercury resistance
AM365_RS16320	SM00382	ATPases associated with a variety of cellular activities
AM365_RS16335	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS16405	SM00878	Biotin carboxylase C-terminal domain
AM365_RS16420	SM00829	Enoylreductase
AM365_RS16425	SM00052	Putative diguanylate phosphodiesterase
AM365_RS16425	SM00267	diguanylate cyclase
AM365_RS16460	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS16515	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM365_RS16520	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM365_RS16575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS16575	SM00895	AM365_RS16575
AM365_RS16580	SM01130	AM365_RS16580
AM365_RS16630	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS16635	SM00073	Histidine Phosphotransfer domain
AM365_RS16635	SM00091	PAS domain
AM365_RS16635	SM00387	Histidine kinase-like ATPases
AM365_RS16635	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS16635	SM00448	cheY-homologous receiver domain
AM365_RS16680	SM00382	ATPases associated with a variety of cellular activities
AM365_RS16710	SM00382	ATPases associated with a variety of cellular activities
AM365_RS16785	SM01103	AM365_RS16785
AM365_RS16795	SM00382	ATPases associated with a variety of cellular activities
AM365_RS16845	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS16865	SM01387	AM365_RS16865
AM365_RS16870	SM00316	Ribosomal protein S1-like RNA-binding domain
AM365_RS16870	SM00322	K homology RNA-binding domain
AM365_RS16875	SM00028	Tetratricopeptide repeats
AM365_RS16885	SM00487	DEAD-like helicases superfamily
AM365_RS16885	SM00490	helicase superfamily c-terminal domain
AM365_RS16920	SM00465	GIY-YIG type nucleases (URI domain)
AM365_RS16935	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM365_RS16945	SM00749	bacterial OsmY and nodulation domain
AM365_RS17055	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS17055	SM01134	AM365_RS17055
AM365_RS17070	SM00858	AM365_RS17070
AM365_RS17230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS17230	SM00895	AM365_RS17230
AM365_RS17265	SM00858	AM365_RS17265
AM365_RS17335	SM01038	Beta galactosidase small chain
AM365_RS17340	SM00354	helix_turn _helix lactose operon repressor
AM365_RS17365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM365_RS17365	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM365_RS17405	SM00400	zinc finger
AM365_RS17405	SM00493	AM365_RS17405
AM365_RS17405	SM00766	DNA primase DnaG DnaB-binding
AM365_RS17445	SM01207	AM365_RS17445
AM365_RS17450	SM00905	Dihydroneopterin aldolase
AM365_RS17465	SM00287	Bacterial SH3 domain homologues
AM365_RS17475	SM01118	AM365_RS17475
AM365_RS17495	SM00244	prohibitin homologues
AM365_RS17595	SM00387	Histidine kinase-like ATPases
AM365_RS17595	SM00433	TopoisomeraseII
AM365_RS17615	SM00387	Histidine kinase-like ATPases
AM365_RS17615	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS17620	SM00448	cheY-homologous receiver domain
AM365_RS17620	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS17630	SM00871	Bacterial transcription activator, effector binding domain
AM365_RS17640	SM00434	DNA Topoisomerase IV
AM365_RS17645	SM00563	Phosphate acyltransferases
AM365_RS17655	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS17680	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS17875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS17875	SM00895	AM365_RS17875
AM365_RS18005	SM00478	endonuclease III
AM365_RS18005	SM00525	AM365_RS18005
AM365_RS18030	SM00870	AM365_RS18030
AM365_RS18040	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM365_RS18050	SM01152	AM365_RS18050
AM365_RS18065	SM00382	ATPases associated with a variety of cellular activities
AM365_RS18070	SM00732	Likely ribonuclease with RNase H fold.
AM365_RS18095	SM00731	SprT homologues.
AM365_RS18140	SM00382	ATPases associated with a variety of cellular activities
AM365_RS18180	SM00861	Transketolase, pyrimidine binding domain
AM365_RS18215	SM00382	ATPases associated with a variety of cellular activities
AM365_RS18220	SM00382	ATPases associated with a variety of cellular activities
AM365_RS18245	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM365_RS18360	SM01011	Aminopeptidase P, N-terminal domain
AM365_RS18400	SM01022	AM365_RS18400
AM365_RS18500	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM365_RS18505	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM365_RS18560	SM00091	PAS domain
AM365_RS18560	SM00382	ATPases associated with a variety of cellular activities
AM365_RS18570	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM365_RS18575	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM365_RS18585	SM00257	Lysin motif
AM365_RS18720	SM00421	helix_turn_helix, Lux Regulon
AM365_RS18760	SM00421	helix_turn_helix, Lux Regulon
AM365_RS18780	SM00028	Tetratricopeptide repeats
AM365_RS18780	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS18810	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS18865	SM00354	helix_turn _helix lactose operon repressor
AM365_RS18870	SM00563	Phosphate acyltransferases
AM365_RS18895	SM00927	DNA mismatch repair enzyme MutH
AM365_RS18905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM365_RS18955	SM00382	ATPases associated with a variety of cellular activities
AM365_RS18965	SM00646	AM365_RS18965
AM365_RS18990	SM00925	MltA specific insert domain
AM365_RS19030	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS19030	SM01134	AM365_RS19030
AM365_RS19055	SM01007	Class II Aldolase and Adducin N-terminal domain
AM365_RS19065	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM365_RS19065	SM00475	5'-3' exonuclease
AM365_RS19115	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS19120	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS19125	SM00073	Histidine Phosphotransfer domain
AM365_RS19125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS19125	SM00387	Histidine kinase-like ATPases
AM365_RS19125	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS19125	SM00448	cheY-homologous receiver domain
AM365_RS19135	SM00954	Region found in RelA / SpoT proteins
AM365_RS19140	SM00966	SpoVT / AbrB like domain 
AM365_RS19160	SM01192	AM365_RS19160
AM365_RS19160	SM01193	AM365_RS19160
AM365_RS19205	SM00893	Electron transfer flavoprotein domain
AM365_RS19255	SM00487	DEAD-like helicases superfamily
AM365_RS19285	SM01101	AM365_RS19285
AM365_RS19355	SM00257	Lysin motif
AM365_RS19365	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM365_RS19395	SM01007	Class II Aldolase and Adducin N-terminal domain
AM365_RS19410	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS19410	SM01134	AM365_RS19410
AM365_RS19420	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AM365_RS19420	SM00534	ATPase domain of DNA mismatch repair MUTS family
AM365_RS19430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM365_RS19430	SM00382	ATPases associated with a variety of cellular activities
AM365_RS19520	SM00354	helix_turn _helix lactose operon repressor
AM365_RS19540	SM00849	Metallo-beta-lactamase superfamily
AM365_RS19545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM365_RS19545	SM00382	ATPases associated with a variety of cellular activities
AM365_RS19555	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS19555	SM01134	AM365_RS19555
AM365_RS19595	SM00382	ATPases associated with a variety of cellular activities
AM365_RS19605	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM365_RS19670	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM365_RS19700	SM00382	ATPases associated with a variety of cellular activities
AM365_RS19740	SM00528	Domain in histone-like proteins of HNS family
AM365_RS19745	SM00450	Rhodanese Homology Domain
AM365_RS19750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM365_RS19760	SM00257	Lysin motif
AM365_RS19760	SM00749	bacterial OsmY and nodulation domain
AM365_RS19765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS19765	SM00895	AM365_RS19765
AM365_RS19890	SM01091	Transporter associated domain
AM365_RS19900	SM00382	ATPases associated with a variety of cellular activities
AM365_RS19900	SM00962	SRP54-type protein, GTPase domain
AM365_RS19900	SM00963	SRP54-type protein, helical bundle domain
AM365_RS19930	SM00267	diguanylate cyclase
AM365_RS19950	SM00830	Chorismate mutase type II
AM365_RS19955	SM00830	Chorismate mutase type II
AM365_RS19975	SM00363	S4 RNA-binding domain
AM365_RS19985	SM00382	ATPases associated with a variety of cellular activities
AM365_RS19985	SM01086	C-terminal, D2-small domain, of ClpB protein
AM365_RS20025	SM00155	Phospholipase D. Active site motifs.
AM365_RS20030	SM00881	CoA binding domain
AM365_RS20035	SM01144	AM365_RS20035
AM365_RS20050	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM365_RS20055	SM00986	Uracil DNA glycosylase superfamily
AM365_RS20055	SM00987	UreE urease accessory protein, C-terminal domain 
AM365_RS20075	SM00487	DEAD-like helicases superfamily
AM365_RS20075	SM00490	helicase superfamily c-terminal domain
AM365_RS20125	SM00358	Double-stranded RNA binding motif
AM365_RS20125	SM00535	Ribonuclease III family
AM365_RS20185	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS20195	SM01211	AM365_RS20195
AM365_RS20200	SM00387	Histidine kinase-like ATPases
AM365_RS20200	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS20210	SM00382	ATPases associated with a variety of cellular activities
AM365_RS20210	SM00448	cheY-homologous receiver domain
AM365_RS20215	SM00938	Nitrogen regulatory protein P-II
AM365_RS20235	SM00028	Tetratricopeptide repeats
AM365_RS20245	SM00382	ATPases associated with a variety of cellular activities
AM365_RS20255	SM00829	Enoylreductase
AM365_RS20345	SM00271	DnaJ molecular chaperone homology domain
AM365_RS20375	SM00450	Rhodanese Homology Domain
AM365_RS20380	SM01359	AM365_RS20380
AM365_RS20380	SM01360	AM365_RS20380
AM365_RS20390	SM00562	AM365_RS20390
AM365_RS20400	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS20420	SM00564	beta-propeller repeat
AM365_RS20440	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM365_RS20440	SM01240	AM365_RS20440
AM365_RS20475	SM00052	Putative diguanylate phosphodiesterase
AM365_RS20475	SM00267	diguanylate cyclase
AM365_RS20545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM365_RS20545	SM00382	ATPases associated with a variety of cellular activities
AM365_RS20625	SM01130	AM365_RS20625
AM365_RS20690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS20690	SM00387	Histidine kinase-like ATPases
AM365_RS20710	SM00861	Transketolase, pyrimidine binding domain
AM365_RS20725	SM00919	Malic enzyme, NAD binding domain
AM365_RS20725	SM01274	AM365_RS20725
AM365_RS20730	SM00877	AM365_RS20730
AM365_RS20755	SM00877	AM365_RS20755
AM365_RS20800	SM00877	AM365_RS20800
AM365_RS20805	SM00877	AM365_RS20805
AM365_RS20810	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS20820	SM00646	AM365_RS20820
AM365_RS20865	SM00822	AM365_RS20865
AM365_RS20885	SM00382	ATPases associated with a variety of cellular activities
AM365_RS20930	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AM365_RS20935	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM365_RS20935	SM00292	breast cancer carboxy-terminal domain
AM365_RS20935	SM00532	Ligase N family
AM365_RS21025	SM00052	Putative diguanylate phosphodiesterase
AM365_RS21025	SM00267	diguanylate cyclase
AM365_RS21080	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS21085	SM00448	cheY-homologous receiver domain
AM365_RS21085	SM00850	LytTr DNA-binding domain
AM365_RS21090	SM00387	Histidine kinase-like ATPases
AM365_RS21150	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS21150	SM00073	Histidine Phosphotransfer domain
AM365_RS21150	SM00387	Histidine kinase-like ATPases
AM365_RS21150	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS21150	SM00448	cheY-homologous receiver domain
AM365_RS21155	SM00421	helix_turn_helix, Lux Regulon
AM365_RS21155	SM00448	cheY-homologous receiver domain
AM365_RS21180	SM00354	helix_turn _helix lactose operon repressor
AM365_RS21185	SM00640	Glycosyl hydrolases family 32
AM365_RS21205	SM00528	Domain in histone-like proteins of HNS family
AM365_RS21370	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS21375	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS21475	SM01252	AM365_RS21475
AM365_RS21510	SM00507	HNH nucleases
AM365_RS21585	SM00994	ClpX C4-type zinc finger
AM365_RS21715	SM00463	Small MutS-related domain
AM365_RS21765	SM00825	Beta-ketoacyl synthase
AM365_RS21790	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM365_RS21835	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS21840	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS21855	SM00382	ATPases associated with a variety of cellular activities
AM365_RS21870	SM00905	Dihydroneopterin aldolase
AM365_RS21930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM365_RS21970	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AM365_RS21975	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS21975	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AM365_RS22075	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS22145	SM00852	Probable molybdopterin binding domain
AM365_RS22150	SM00346	helix_turn_helix isocitrate lyase regulation
AM365_RS22155	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM365_RS22235	SM00869	Autotransporter beta-domain
AM365_RS22245	SM00434	DNA Topoisomerase IV
AM365_RS22260	SM01359	AM365_RS22260
AM365_RS22260	SM01360	AM365_RS22260
AM365_RS22275	SM00387	Histidine kinase-like ATPases
AM365_RS22275	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS22275	SM00448	cheY-homologous receiver domain
AM365_RS22280	SM00421	helix_turn_helix, Lux Regulon
AM365_RS22280	SM00448	cheY-homologous receiver domain
AM365_RS22285	SM00387	Histidine kinase-like ATPases
AM365_RS22310	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS22320	SM00382	ATPases associated with a variety of cellular activities
AM365_RS22350	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM365_RS22375	SM00382	ATPases associated with a variety of cellular activities
AM365_RS22415	SM00421	helix_turn_helix, Lux Regulon
AM365_RS22415	SM00448	cheY-homologous receiver domain
AM365_RS22425	SM00869	Autotransporter beta-domain
AM365_RS22460	SM00487	DEAD-like helicases superfamily
AM365_RS22460	SM00490	helicase superfamily c-terminal domain
AM365_RS22470	SM00363	S4 RNA-binding domain
AM365_RS22490	SM00382	ATPases associated with a variety of cellular activities
AM365_RS22510	SM00052	Putative diguanylate phosphodiesterase
AM365_RS22520	SM00014	Acid phosphatase homologues
AM365_RS22525	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM365_RS22535	SM00841	Elongation factor P, C-terminal
AM365_RS22535	SM01185	AM365_RS22535
AM365_RS22580	SM00100	Cyclic nucleotide-monophosphate binding domain
AM365_RS22600	SM00518	AP endonuclease family 2
AM365_RS22665	SM00354	helix_turn _helix lactose operon repressor
AM365_RS22675	SM00382	ATPases associated with a variety of cellular activities
AM365_RS22770	SM01217	AM365_RS22770
AM365_RS22785	SM00382	ATPases associated with a variety of cellular activities
AM365_RS22800	SM00422	helix_turn_helix, mercury resistance
AM365_RS22805	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM365_RS22810	SM00448	cheY-homologous receiver domain
AM365_RS22810	SM00850	LytTr DNA-binding domain
AM365_RS22830	SM00327	von Willebrand factor (vWF) type A domain
AM365_RS22840	SM00382	ATPases associated with a variety of cellular activities
AM365_RS22855	SM00773	Proposed nucleic acid binding domain
AM365_RS22925	SM00641	Glycosyl hydrolases family 25
AM365_RS22930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM365_RS22930	SM00866	AM365_RS22930
AM365_RS22950	SM01133	AM365_RS22950
AM365_RS22985	SM00829	Enoylreductase
AM365_RS22990	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM365_RS22990	SM01134	AM365_RS22990
AM365_RS22995	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AM365_RS23030	SM00448	cheY-homologous receiver domain
AM365_RS23030	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS23035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS23035	SM00387	Histidine kinase-like ATPases
AM365_RS23035	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS23065	SM00327	von Willebrand factor (vWF) type A domain
AM365_RS23085	SM00478	endonuclease III
AM365_RS23085	SM01009	AlkA N-terminal domain
AM365_RS23090	SM00052	Putative diguanylate phosphodiesterase
AM365_RS23090	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM365_RS23090	SM00091	PAS domain
AM365_RS23090	SM00267	diguanylate cyclase
AM365_RS23110	SM01091	Transporter associated domain
AM365_RS23120	SM00226	Low molecular weight phosphatase family
AM365_RS23235	SM00858	AM365_RS23235
AM365_RS23275	SM01350	AM365_RS23275
AM365_RS23280	SM00984	UDP binding domain
AM365_RS23375	SM00479	AM365_RS23375
AM365_RS23380	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM365_RS23385	SM00871	Bacterial transcription activator, effector binding domain
AM365_RS23470	SM00869	Autotransporter beta-domain
AM365_RS23600	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AM365_RS23600	SM00634	Bacterial Ig-like domain (group 1)
AM365_RS23660	SM00487	DEAD-like helicases superfamily
AM365_RS23660	SM00490	helicase superfamily c-terminal domain
AM365_RS23805	SM00822	AM365_RS23805
AM365_RS23805	SM00823	Phosphopantetheine attachment site
AM365_RS23805	SM00824	Thioesterase
AM365_RS23805	SM00825	Beta-ketoacyl synthase
AM365_RS23805	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM365_RS23810	SM00823	Phosphopantetheine attachment site
AM365_RS23815	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS23820	SM00382	ATPases associated with a variety of cellular activities
AM365_RS23825	SM00382	ATPases associated with a variety of cellular activities
AM365_RS23910	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS23955	SM00507	HNH nucleases
AM365_RS24025	SM00507	HNH nucleases
AM365_RS24095	SM00095	Transthyretin
AM365_RS24100	SM00448	cheY-homologous receiver domain
AM365_RS24100	SM00862	Transcriptional regulatory protein, C terminal
AM365_RS24105	SM00387	Histidine kinase-like ATPases
AM365_RS24105	SM00388	His Kinase A (phosphoacceptor) domain
AM365_RS24130	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM365_RS24165	SM00267	diguanylate cyclase
AM365_RS24190	SM00421	helix_turn_helix, Lux Regulon
AM365_RS24240	SM00382	ATPases associated with a variety of cellular activities
AM365_RS24295	SM00642	Alpha-amylase domain
AM365_RS24330	SM00062	Bacterial periplasmic substrate-binding proteins
AM365_RS24330	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM365_RS24345	SM00382	ATPases associated with a variety of cellular activities
AM365_RS24350	SM00421	helix_turn_helix, Lux Regulon
AM365_RS24360	SM00421	helix_turn_helix, Lux Regulon
AM365_RS24360	SM00448	cheY-homologous receiver domain
AM365_RS24365	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM365_RS24365	SM00465	GIY-YIG type nucleases (URI domain)
AM365_RS24440	SM00382	ATPases associated with a variety of cellular activities
AM365_RS24485	SM00073	Histidine Phosphotransfer domain
AM365_RS24485	SM00260	Two component signalling adaptor domain
AM365_RS24485	SM00387	Histidine kinase-like ATPases
AM365_RS24485	SM01231	AM365_RS24485
AM365_RS24490	SM00260	Two component signalling adaptor domain
AM365_RS24495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM365_RS24495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS24495	SM00319	Homologues of the ligand binding domain of Tar
AM365_RS24500	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM365_RS24500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM365_RS24500	SM00319	Homologues of the ligand binding domain of Tar
AM365_RS24505	SM00138	Methyltransferase, chemotaxis proteins 
AM365_RS24510	SM00448	cheY-homologous receiver domain
AM365_RS24515	SM00448	cheY-homologous receiver domain
AM365_RS24545	SM00836	DALR anticodon binding domain
AM365_RS24545	SM01016	Arginyl tRNA synthetase N terminal dom
AM365_RS24640	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM365_RS24645	SM00382	ATPases associated with a variety of cellular activities
AM365_RS24655	SM00382	ATPases associated with a variety of cellular activities
AM365_RS24665	SM00257	Lysin motif
AM365_RS24730	SM00479	AM365_RS24730
AM365_RS24790	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM365_RS24795	SM00945	ProQ/FINO family
AM365_RS24800	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM365_RS24800	SM00245	tail specific protease
AM365_RS24815	SM00346	helix_turn_helix isocitrate lyase regulation
AM365_RS24845	SM00357	Cold shock protein domain
AM365_RS24895	SM01091	Transporter associated domain
AM365_RS24900	SM00052	Putative diguanylate phosphodiesterase
AM365_RS24935	SM00487	DEAD-like helicases superfamily
AM365_RS24935	SM00491	AM365_RS24935
AM365_RS24955	SM00341	Helicase and RNase D C-terminal
AM365_RS24955	SM00474	3'-5' exonuclease
AM365_RS24975	SM01329	AM365_RS24975
AM365_RS25000	SM01321	AM365_RS25000
AM365_RS25025	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM365_RS25025	SM00267	diguanylate cyclase
AM365_RS25045	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS25065	SM00267	diguanylate cyclase
AM365_RS25070	SM00267	diguanylate cyclase
AM365_RS25080	SM00763	PrkA AAA domain
AM365_RS25100	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM365_RS25120	SM00870	AM365_RS25120
AM365_RS25150	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM365_RS25150	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM365_RS25150	SM00493	AM365_RS25150
AM365_RS25160	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AM365_RS25180	SM00450	Rhodanese Homology Domain
AM365_RS25185	SM00382	ATPases associated with a variety of cellular activities
AM365_RS25265	SM00465	GIY-YIG type nucleases (URI domain)
AM365_RS25300	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS25315	SM01060	AM365_RS25315
AM365_RS25385	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM365_RS25415	SM00873	B3/4 domain
AM365_RS25415	SM00874	tRNA synthetase B5 domain
AM365_RS25415	SM00896	Ferredoxin-fold anticodon binding domain
AM365_RS25420	SM00411	bacterial (prokaryotic) histone like domain
AM365_RS25520	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS25550	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS25580	SM00382	ATPases associated with a variety of cellular activities
AM365_RS25640	SM00893	Electron transfer flavoprotein domain
AM365_RS25645	SM00893	Electron transfer flavoprotein domain
AM365_RS25655	SM00342	helix_turn_helix, arabinose operon control protein
AM365_RS25665	SM00882	Coenzyme A transferase
AM365_RS25735	SM00382	ATPases associated with a variety of cellular activities
AM365_RS25755	SM00257	Lysin motif
AM365_RS25780	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
AM365_RS25785	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
AM365_RS25860	SM00354	helix_turn _helix lactose operon repressor
AM365_RS25895	SM00382	ATPases associated with a variety of cellular activities
AM365_RS25895	SM00487	DEAD-like helicases superfamily
AM365_RS25895	SM00490	helicase superfamily c-terminal domain
AM365_RS25900	SM00479	AM365_RS25900
AM365_RS25950	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM365_RS25975	SM00363	S4 RNA-binding domain
AM365_RS26000	SM00478	endonuclease III
AM365_RS26000	SM00525	AM365_RS26000
AM365_RS26010	SM00900	AM365_RS26010
AM365_RS26075	SM00354	helix_turn _helix lactose operon repressor
AM365_RS26100	SM00382	ATPases associated with a variety of cellular activities
AM365_RS26160	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS26170	SM00411	bacterial (prokaryotic) histone like domain
AM365_RS26175	SM00318	Staphylococcal nuclease homologues
AM365_RS26395	SM00883	Chaperonin 10 Kd subunit
AM365_RS26420	SM00849	Metallo-beta-lactamase superfamily
AM365_RS26440	SM00479	AM365_RS26440
AM365_RS26510	SM00422	helix_turn_helix, mercury resistance
AM365_RS26575	SM00478	endonuclease III
AM365_RS26625	SM00857	Resolvase, N terminal domain
AM365_RS26650	SM00778	Zinc-binding domain of primase-helicase
AM365_RS26880	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM365_RS26880	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM365_RS26880	SM00493	AM365_RS26880
AM365_RS26885	SM00382	ATPases associated with a variety of cellular activities
AM365_RS26965	SM00470	ParB-like nuclease domain
AM365_RS27170	SM00155	Phospholipase D. Active site motifs.
AM365_RS27315	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM365_RS27375	SM00052	Putative diguanylate phosphodiesterase
AM365_RS27400	SM00857	Resolvase, N terminal domain
AM365_RS27460	SM00974	AM365_RS27460
AM365_RS27515	SM00857	Resolvase, N terminal domain
AM365_RS27545	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM365_RS27580	SM00382	ATPases associated with a variety of cellular activities
AM365_RS27960	SM00530	Helix-turn-helix XRE-family like proteins 
AM365_RS28040	SM00994	ClpX C4-type zinc finger
AM365_RS28195	SM00244	prohibitin homologues
AM365_RS28245	SM00990	AM365_RS28245
AM365_RS28260	SM00487	DEAD-like helicases superfamily
