locus-tag class description AM408_RS00015 PF10011 Predicted membrane protein (DUF2254) AM408_RS00035 PF04542 Sigma-70 region 2 AM408_RS00035 PF08281 Sigma-70, region 4 AM408_RS00040 PF16220 Domain of unknown function (DUF4880) AM408_RS00040 PF04773 FecR protein AM408_RS00045 PF07715 TonB-dependent Receptor Plug Domain AM408_RS00045 PF00593 TonB dependent receptor AM408_RS00045 PF07660 Secretin and TonB N terminus short domain AM408_RS00050 PF01497 Periplasmic binding protein AM408_RS00055 PF01032 FecCD transport family AM408_RS00060 PF01032 FecCD transport family AM408_RS00065 PF00005 ABC transporter AM408_RS00115 PF03279 Bacterial lipid A biosynthesis acyltransferase AM408_RS00120 PF00665 Integrase core domain AM408_RS00120 PF13333 Integrase core domain AM408_RS00120 PF13276 HTH-like domain AM408_RS00135 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM408_RS00140 PF01636 Phosphotransferase enzyme family AM408_RS00145 PF00809 Pterin binding enzyme AM408_RS00160 PF02371 Transposase IS116/IS110/IS902 family AM408_RS00160 PF01548 Transposase AM408_RS00165 PF13700 Domain of unknown function (DUF4158) AM408_RS00165 PF01526 Tn3 transposase DDE domain AM408_RS00175 PF13610 DDE domain AM408_RS00185 PF01526 Tn3 transposase DDE domain AM408_RS00185 PF13700 Domain of unknown function (DUF4158) AM408_RS00195 PF00440 Bacterial regulatory proteins, tetR family AM408_RS00195 PF02909 Tetracyclin repressor-like, C-terminal domain AM408_RS00200 PF07690 Major Facilitator Superfamily AM408_RS00205 PF00892 EamA-like transporter family AM408_RS00215 PF01526 Tn3 transposase DDE domain AM408_RS00215 PF13700 Domain of unknown function (DUF4158) AM408_RS00220 PF01238 Phosphomannose isomerase type I AM408_RS00225 PF00589 Phage integrase family AM408_RS00225 PF02899 Phage integrase, N-terminal SAM-like domain AM408_RS00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS00245 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS00245 PF09308 LuxQ, periplasmic AM408_RS00245 PF00072 Response regulator receiver domain AM408_RS00285 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AM408_RS00315 PF03743 Bacterial conjugation TrbI-like protein AM408_RS00320 PF00437 Type II/IV secretion system protein AM408_RS00345 PF01131 DNA topoisomerase AM408_RS00345 PF01751 Toprim domain AM408_RS00350 PF00816 H-NS histone family AM408_RS00365 PF13091 PLD-like domain AM408_RS00375 PF13362 Toprim domain AM408_RS00375 PF08401 Domain of unknown function (DUF1738) AM408_RS00375 PF18818 Metallopeptidase superfamily domain AM408_RS00380 PF00717 Peptidase S24-like AM408_RS00390 PF14319 Transposase zinc-binding domain AM408_RS00390 PF04986 Putative transposase AM408_RS00400 PF01051 Initiator Replication protein AM408_RS00405 PF18607 ParA helix turn helix domain AM408_RS00405 PF13614 AAA domain AM408_RS00410 PF02195 ParB-like nuclease domain AM408_RS00410 PF08775 ParB family AM408_RS00420 PF13610 DDE domain AM408_RS00425 PF01527 Transposase AM408_RS00445 PF02371 Transposase IS116/IS110/IS902 family AM408_RS00445 PF01548 Transposase AM408_RS00450 PF00665 Integrase core domain AM408_RS00450 PF13276 HTH-like domain AM408_RS00450 PF13333 Integrase core domain AM408_RS00500 PF13683 Integrase core domain AM408_RS00500 PF13276 HTH-like domain AM408_RS00535 PF13700 Domain of unknown function (DUF4158) AM408_RS00535 PF01526 Tn3 transposase DDE domain AM408_RS00545 PF13610 DDE domain AM408_RS00555 PF18644 Phage integrase SAM-like domain AM408_RS00555 PF00589 Phage integrase family AM408_RS00570 PF10011 Predicted membrane protein (DUF2254) AM408_RS00580 PF02028 BCCT, betaine/carnitine/choline family transporter AM408_RS00590 PF04221 RelB antitoxin AM408_RS00595 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AM408_RS00605 PF00239 Resolvase, N terminal domain AM408_RS00605 PF02796 Helix-turn-helix domain of resolvase AM408_RS00615 PF02796 Helix-turn-helix domain of resolvase AM408_RS00615 PF00239 Resolvase, N terminal domain AM408_RS00620 PF13599 Pentapeptide repeats (9 copies) AM408_RS00630 PF01526 Tn3 transposase DDE domain AM408_RS00630 PF13700 Domain of unknown function (DUF4158) AM408_RS00650 PF01526 Tn3 transposase DDE domain AM408_RS00650 PF13700 Domain of unknown function (DUF4158) AM408_RS00655 PF00239 Resolvase, N terminal domain AM408_RS00655 PF02796 Helix-turn-helix domain of resolvase AM408_RS00685 PF00437 Type II/IV secretion system protein AM408_RS00695 PF03743 Bacterial conjugation TrbI-like protein AM408_RS00725 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AM408_RS00790 PF00684 DnaJ central domain AM408_RS00790 PF01556 DnaJ C terminal domain AM408_RS00790 PF00226 DnaJ domain AM408_RS00800 PF01051 Initiator Replication protein AM408_RS00830 PF13614 AAA domain AM408_RS00835 PF02796 Helix-turn-helix domain of resolvase AM408_RS00835 PF00239 Resolvase, N terminal domain AM408_RS00840 PF13542 Helix-turn-helix domain of transposase family ISL3 AM408_RS00840 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM408_RS00840 PF01610 Transposase AM408_RS00850 PF00717 Peptidase S24-like AM408_RS00860 PF13610 DDE domain AM408_RS00865 PF03091 CutA1 divalent ion tolerance protein AM408_RS00870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM408_RS00875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM408_RS00885 PF00753 Metallo-beta-lactamase superfamily AM408_RS00890 PF01609 Transposase DDE domain AM408_RS00890 PF05598 Transposase domain (DUF772) AM408_RS00900 PF00665 Integrase core domain AM408_RS00900 PF13936 Helix-turn-helix domain AM408_RS00910 PF02796 Helix-turn-helix domain of resolvase AM408_RS00910 PF00239 Resolvase, N terminal domain AM408_RS00915 PF01526 Tn3 transposase DDE domain AM408_RS00915 PF13700 Domain of unknown function (DUF4158) AM408_RS00925 PF01526 Tn3 transposase DDE domain AM408_RS00925 PF13700 Domain of unknown function (DUF4158) AM408_RS00970 PF00816 H-NS histone family AM408_RS00975 PF01131 DNA topoisomerase AM408_RS00975 PF01751 Toprim domain AM408_RS00980 PF01434 Peptidase family M41 AM408_RS00980 PF06480 FtsH Extracellular AM408_RS00980 PF17862 AAA+ lid domain AM408_RS00980 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS00985 PF00565 Staphylococcal nuclease homologue AM408_RS00990 PF01137 RNA 3'-terminal phosphate cyclase AM408_RS00990 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AM408_RS00995 PF00196 Bacterial regulatory proteins, luxR family AM408_RS00995 PF17874 MalT-like TPR region AM408_RS01000 PF00343 Carbohydrate phosphorylase AM408_RS01005 PF02446 4-alpha-glucanotransferase AM408_RS01010 PF02447 GntP family permease AM408_RS01015 PF01106 NifU-like domain AM408_RS01015 PF01521 Iron-sulphur cluster biosynthesis AM408_RS01020 PF00156 Phosphoribosyl transferase domain AM408_RS01025 PF00561 alpha/beta hydrolase fold AM408_RS01030 PF04754 Putative transposase, YhgA-like AM408_RS01040 PF09012 FeoC like transcriptional regulator AM408_RS01045 PF17910 FeoB cytosolic helical domain AM408_RS01045 PF07670 Nucleoside recognition AM408_RS01045 PF02421 Ferrous iron transport protein B AM408_RS01045 PF07664 Ferrous iron transport protein B C terminus AM408_RS01050 PF04023 FeoA domain AM408_RS01060 PF09371 Tex-like protein N-terminal domain AM408_RS01060 PF17674 HHH domain AM408_RS01060 PF16921 Tex protein YqgF-like domain AM408_RS01060 PF00575 S1 RNA binding domain AM408_RS01065 PF01272 Transcription elongation factor, GreA/GreB, C-term AM408_RS01065 PF03449 Transcription elongation factor, N-terminal AM408_RS01075 PF00486 Transcriptional regulatory protein, C terminal AM408_RS01075 PF00072 Response regulator receiver domain AM408_RS01080 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS01080 PF00672 HAMP domain AM408_RS01085 PF01293 Phosphoenolpyruvate carboxykinase AM408_RS01095 PF13687 Domain of unknown function (DUF4153) AM408_RS01100 PF01430 Hsp33 protein AM408_RS01105 PF01479 S4 domain AM408_RS01110 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS01115 PF07095 Intracellular growth attenuator protein IgaA AM408_RS01120 PF00293 NUDIX domain AM408_RS01125 PF00912 Transglycosylase AM408_RS01125 PF17092 Penicillin-binding protein OB-like domain AM408_RS01125 PF00905 Penicillin binding protein transpeptidase domain AM408_RS01135 PF05137 Fimbrial assembly protein (PilN) AM408_RS01145 PF10748 DNA utilization proteins HofP AM408_RS01150 PF03958 Bacterial type II/III secretion system short domain AM408_RS01150 PF00263 Bacterial type II and III secretion system protein AM408_RS01155 PF01202 Shikimate kinase AM408_RS01160 PF01761 3-dehydroquinate synthase AM408_RS01165 PF05036 Sporulation related domain AM408_RS01170 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM408_RS01175 PF00834 Ribulose-phosphate 3 epimerase family AM408_RS01180 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS01185 PF00579 tRNA synthetases class I (W and Y) AM408_RS01195 PF14503 YhfZ C-terminal domain AM408_RS01195 PF14502 Helix-turn-helix domain AM408_RS01205 PF01168 Alanine racemase, N-terminal domain AM408_RS01210 PF01676 Metalloenzyme superfamily AM408_RS01215 PF02126 Phosphotriesterase family AM408_RS01220 PF10941 Protein of unknown function DUF2620 AM408_RS01225 PF10797 Protein of unknown function AM408_RS01230 PF00155 Aminotransferase class I and II AM408_RS01235 PF07702 UTRA domain AM408_RS01235 PF00392 Bacterial regulatory proteins, gntR family AM408_RS01240 PF00294 pfkB family carbohydrate kinase AM408_RS01245 PF01261 Xylose isomerase-like TIM barrel AM408_RS01250 PF01261 Xylose isomerase-like TIM barrel AM408_RS01255 PF01380 SIS domain AM408_RS01260 PF13520 Amino acid permease AM408_RS01265 PF13978 Protein of unknown function (DUF4223) AM408_RS01270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM408_RS01270 PF10414 Sirohaem synthase dimerisation region AM408_RS01270 PF14824 Sirohaem biosynthesis protein central AM408_RS01275 PF01226 Formate/nitrite transporter AM408_RS01280 PF13806 Rieske-like [2Fe-2S] domain AM408_RS01285 PF04324 BFD-like [2Fe-2S] binding domain AM408_RS01285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM408_RS01285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM408_RS01285 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM408_RS01285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS01290 PF07690 Major Facilitator Superfamily AM408_RS01295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM408_RS01300 PF10832 Protein of unknown function (DUF2559) AM408_RS01305 PF02661 Fic/DOC family AM408_RS01310 PF00117 Glutamine amidotransferase class-I AM408_RS01315 PF00202 Aminotransferase class-III AM408_RS01320 PF12805 FUSC-like inner membrane protein yccS AM408_RS01325 PF00027 Cyclic nucleotide-binding domain AM408_RS01325 PF13545 Crp-like helix-turn-helix domain AM408_RS01335 PF02566 OsmC-like protein AM408_RS01340 PF00485 Phosphoribulokinase / Uridine kinase family AM408_RS01345 PF06794 Uncharacterised protein family (UPF0270) AM408_RS01350 PF00561 alpha/beta hydrolase fold AM408_RS01355 PF12848 ABC transporter AM408_RS01355 PF00005 ABC transporter AM408_RS01365 PF02525 Flavodoxin-like fold AM408_RS01370 PF00999 Sodium/hydrogen exchanger family AM408_RS01370 PF02254 TrkA-N domain AM408_RS01375 PF09526 Probable metal-binding protein (DUF2387) AM408_RS01380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM408_RS01385 PF04102 SlyX AM408_RS01390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM408_RS01390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM408_RS01395 PF13309 HTH domain AM408_RS01395 PF08348 YheO-like PAS domain AM408_RS01400 PF02635 DsrE/DsrF-like family AM408_RS01405 PF02635 DsrE/DsrF-like family AM408_RS01410 PF04077 DsrH like protein AM408_RS01415 PF00164 Ribosomal protein S12/S23 AM408_RS01420 PF00177 Ribosomal protein S7p/S5e AM408_RS01425 PF00679 Elongation factor G C-terminus AM408_RS01425 PF03764 Elongation factor G, domain IV AM408_RS01425 PF03144 Elongation factor Tu domain 2 AM408_RS01425 PF14492 Elongation Factor G, domain II AM408_RS01425 PF00009 Elongation factor Tu GTP binding domain AM408_RS01430 PF03144 Elongation factor Tu domain 2 AM408_RS01430 PF00009 Elongation factor Tu GTP binding domain AM408_RS01430 PF03143 Elongation factor Tu C-terminal domain AM408_RS01440 PF02839 Carbohydrate binding domain AM408_RS01445 PF04324 BFD-like [2Fe-2S] binding domain AM408_RS01450 PF00210 Ferritin-like domain AM408_RS01455 PF01478 Type IV leader peptidase family AM408_RS01460 PF04612 Type II secretion system (T2SS), protein M AM408_RS01465 PF05134 Type II secretion system (T2SS), protein L AM408_RS01465 PF12693 GspL periplasmic domain AM408_RS01470 PF03934 Type II secretion system (T2SS), protein K AM408_RS01475 PF07963 Prokaryotic N-terminal methylation motif AM408_RS01475 PF11612 Type II secretion system (T2SS), protein J AM408_RS01480 PF02501 Type II secretion system (T2SS), protein I AM408_RS01480 PF07963 Prokaryotic N-terminal methylation motif AM408_RS01485 PF07963 Prokaryotic N-terminal methylation motif AM408_RS01485 PF12019 Type II transport protein GspH AM408_RS01490 PF07963 Prokaryotic N-terminal methylation motif AM408_RS01490 PF08334 Type II secretion system (T2SS), protein G AM408_RS01495 PF00482 Type II secretion system (T2SS), protein F AM408_RS01500 PF00437 Type II/IV secretion system protein AM408_RS01505 PF00263 Bacterial type II and III secretion system protein AM408_RS01505 PF03958 Bacterial type II/III secretion system short domain AM408_RS01510 PF11356 Type II secretion system protein C AM408_RS01515 PF13401 AAA domain AM408_RS01515 PF01471 Putative peptidoglycan binding domain AM408_RS01530 PF00338 Ribosomal protein S10p/S20e AM408_RS01535 PF00297 Ribosomal protein L3 AM408_RS01540 PF00573 Ribosomal protein L4/L1 family AM408_RS01545 PF00276 Ribosomal protein L23 AM408_RS01550 PF03947 Ribosomal Proteins L2, C-terminal domain AM408_RS01550 PF00181 Ribosomal Proteins L2, RNA binding domain AM408_RS01555 PF00203 Ribosomal protein S19 AM408_RS01560 PF00237 Ribosomal protein L22p/L17e AM408_RS01565 PF00189 Ribosomal protein S3, C-terminal domain AM408_RS01565 PF07650 KH domain AM408_RS01570 PF00252 Ribosomal protein L16p/L10e AM408_RS01575 PF00831 Ribosomal L29 protein AM408_RS01580 PF00366 Ribosomal protein S17 AM408_RS01585 PF00238 Ribosomal protein L14p/L23e AM408_RS01590 PF00467 KOW motif AM408_RS01590 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM408_RS01595 PF00281 Ribosomal protein L5 AM408_RS01595 PF00673 ribosomal L5P family C-terminus AM408_RS01600 PF00253 Ribosomal protein S14p/S29e AM408_RS01605 PF00410 Ribosomal protein S8 AM408_RS01610 PF00347 Ribosomal protein L6 AM408_RS01615 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM408_RS01620 PF03719 Ribosomal protein S5, C-terminal domain AM408_RS01620 PF00333 Ribosomal protein S5, N-terminal domain AM408_RS01625 PF00327 Ribosomal protein L30p/L7e AM408_RS01630 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM408_RS01635 PF00344 SecY translocase AM408_RS01640 PF00444 Ribosomal protein L36 AM408_RS01645 PF00416 Ribosomal protein S13/S18 AM408_RS01650 PF00411 Ribosomal protein S11 AM408_RS01655 PF00163 Ribosomal protein S4/S9 N-terminal domain AM408_RS01655 PF01479 S4 domain AM408_RS01660 PF01000 RNA polymerase Rpb3/RpoA insert domain AM408_RS01660 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM408_RS01660 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM408_RS01665 PF01196 Ribosomal protein L17 AM408_RS01670 PF09350 Domain of unknown function (DUF1992) AM408_RS01675 PF13411 MerR HTH family regulatory protein AM408_RS01680 PF03889 Alternative ribosome-rescue factor A AM408_RS01685 PF01741 Large-conductance mechanosensitive channel, MscL AM408_RS01690 PF02254 TrkA-N domain AM408_RS01690 PF02080 TrkA-C domain AM408_RS01695 PF01029 NusB family AM408_RS01695 PF01189 16S rRNA methyltransferase RsmB/F AM408_RS01700 PF00551 Formyl transferase AM408_RS01700 PF02911 Formyl transferase, C-terminal domain AM408_RS01705 PF01327 Polypeptide deformylase AM408_RS01710 PF02481 DNA recombination-mediator protein A AM408_RS01710 PF17782 DprA winged helix domain AM408_RS01715 PF04361 Protein of unknown function (DUF494) AM408_RS01720 PF01396 Topoisomerase DNA binding C4 zinc finger AM408_RS01725 PF01300 Telomere recombination AM408_RS01730 PF01488 Shikimate / quinate 5-dehydrogenase AM408_RS01730 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM408_RS01730 PF08501 Shikimate dehydrogenase substrate binding domain AM408_RS01735 PF07369 Protein of unknown function (DUF1488) AM408_RS01740 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS01780 PF00005 ABC transporter AM408_RS01785 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS01790 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS01795 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS01815 PF00873 AcrB/AcrD/AcrF family AM408_RS01820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS01820 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS01825 PF13737 Transposase DDE domain AM408_RS01835 PF01555 DNA methylase AM408_RS01840 PF02954 Bacterial regulatory protein, Fis family AM408_RS01845 PF01207 Dihydrouridine synthase (Dus) AM408_RS01855 PF00474 Sodium:solute symporter family AM408_RS01860 PF06196 Protein of unknown function (DUF997) AM408_RS01865 PF00289 Biotin carboxylase, N-terminal domain AM408_RS01865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM408_RS01865 PF02785 Biotin carboxylase C-terminal domain AM408_RS01870 PF00364 Biotin-requiring enzyme AM408_RS01880 PF00107 Zinc-binding dehydrogenase AM408_RS01880 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS01885 PF00563 EAL domain AM408_RS01885 PF17157 Gammaproteobacterial periplasmic sensor domain AM408_RS01885 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS01905 PF04085 rod shape-determining protein MreC AM408_RS01910 PF04093 rod shape-determining protein MreD AM408_RS01915 PF02545 Maf-like protein AM408_RS01920 PF10150 Ribonuclease E/G family AM408_RS01920 PF00575 S1 RNA binding domain AM408_RS01925 PF13116 Protein of unknown function AM408_RS01925 PF13502 AsmA-like C-terminal region AM408_RS01930 PF01523 Putative modulator of DNA gyrase AM408_RS01935 PF03466 LysR substrate binding domain AM408_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS01940 PF07869 Protein of unknown function (DUF1656) AM408_RS01945 PF13533 Biotin-lipoyl like AM408_RS01950 PF04632 Fusaric acid resistance protein family AM408_RS01955 PF01337 Barstar (barnase inhibitor) AM408_RS01960 PF07338 Protein of unknown function (DUF1471) AM408_RS01965 PF02863 Arginine repressor, C-terminal domain AM408_RS01965 PF01316 Arginine repressor, DNA binding domain AM408_RS01970 PF00056 lactate/malate dehydrogenase, NAD binding domain AM408_RS01970 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM408_RS01975 PF13180 PDZ domain AM408_RS01980 PF13180 PDZ domain AM408_RS01980 PF00595 PDZ domain AM408_RS01985 PF06295 Protein of unknown function (DUF1043) AM408_RS01990 PF03969 AFG1-like ATPase AM408_RS01995 PF00572 Ribosomal protein L13 AM408_RS02000 PF00380 Ribosomal protein S9/S16 AM408_RS02010 PF00043 Glutathione S-transferase, C-terminal domain AM408_RS02010 PF02798 Glutathione S-transferase, N-terminal domain AM408_RS02015 PF04386 Stringent starvation protein B AM408_RS02020 PF03606 C4-dicarboxylate anaerobic carrier AM408_RS02030 PF07729 FCD domain AM408_RS02030 PF00392 Bacterial regulatory proteins, gntR family AM408_RS02035 PF00701 Dihydrodipicolinate synthetase family AM408_RS02040 PF07690 Major Facilitator Superfamily AM408_RS02045 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM408_RS02050 PF00480 ROK family AM408_RS02055 PF04074 YhcH/YjgK/YiaL AM408_RS02060 PF06250 YhcG PDDEXK nuclease domain AM408_RS02060 PF17761 DUF1016 N-terminal domain AM408_RS02080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS02085 PF00665 Integrase core domain AM408_RS02085 PF13276 HTH-like domain AM408_RS02085 PF13333 Integrase core domain AM408_RS02090 PF17761 DUF1016 N-terminal domain AM408_RS02090 PF06250 YhcG PDDEXK nuclease domain AM408_RS02095 PF06551 Protein of unknown function (DUF1120) AM408_RS02105 PF00577 Outer membrane usher protein AM408_RS02105 PF13954 PapC N-terminal domain AM408_RS02105 PF13953 PapC C-terminal domain AM408_RS02110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS02115 PF06551 Protein of unknown function (DUF1120) AM408_RS02125 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM408_RS02125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS02130 PF00310 Glutamine amidotransferases class-II AM408_RS02130 PF01645 Conserved region in glutamate synthase AM408_RS02130 PF04898 Glutamate synthase central domain AM408_RS02130 PF01493 GXGXG motif AM408_RS02145 PF04055 Radical SAM superfamily AM408_RS02145 PF16199 Radical_SAM C-terminal domain AM408_RS02150 PF00072 Response regulator receiver domain AM408_RS02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS02150 PF00989 PAS fold AM408_RS02150 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS02150 PF01627 Hpt domain AM408_RS02150 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM408_RS02160 PF00912 Transglycosylase AM408_RS02165 PF10707 PhoP regulatory network protein YrbL AM408_RS02170 PF00381 PTS HPr component phosphorylation site AM408_RS02175 PF03668 P-loop ATPase protein family AM408_RS02180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS02185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM408_RS02190 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM408_RS02190 PF04552 Sigma-54, DNA binding domain AM408_RS02190 PF04963 Sigma-54 factor, core binding domain AM408_RS02195 PF00005 ABC transporter AM408_RS02195 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM408_RS02200 PF03968 OstA-like protein AM408_RS02205 PF06835 Lipopolysaccharide-assembly, LptC-related AM408_RS02215 PF00571 CBS domain AM408_RS02215 PF01380 SIS domain AM408_RS02220 PF01699 Sodium/calcium exchanger protein AM408_RS02225 PF00005 ABC transporter AM408_RS02230 PF02405 Permease MlaE AM408_RS02235 PF02470 MlaD protein AM408_RS02240 PF05494 MlaC protein AM408_RS02245 PF13466 STAS domain AM408_RS02250 PF01722 BolA-like protein AM408_RS02255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM408_RS02260 PF13693 Winged helix-turn-helix DNA-binding AM408_RS02265 PF00348 Polyprenyl synthetase AM408_RS02270 PF00829 Ribosomal prokaryotic L21 protein AM408_RS02275 PF01016 Ribosomal L27 protein AM408_RS02280 PF00892 EamA-like transporter family AM408_RS02285 PF01926 50S ribosome-binding GTPase AM408_RS02285 PF01018 GTP1/OBG AM408_RS02290 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM408_RS02295 PF01272 Transcription elongation factor, GreA/GreB, C-term AM408_RS02295 PF03449 Transcription elongation factor, N-terminal AM408_RS02300 PF01985 CRS1 / YhbY (CRM) domain AM408_RS02305 PF01728 FtsJ-like methyltransferase AM408_RS02310 PF17862 AAA+ lid domain AM408_RS02310 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS02310 PF06480 FtsH Extracellular AM408_RS02310 PF01434 Peptidase family M41 AM408_RS02315 PF00809 Pterin binding enzyme AM408_RS02320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM408_RS02320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM408_RS02320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM408_RS02320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM408_RS02325 PF03840 Preprotein translocase SecG subunit AM408_RS02340 PF00884 Sulfatase AM408_RS02345 PF00764 Arginosuccinate synthase AM408_RS02355 PF17384 RimP C-terminal SH3 domain AM408_RS02355 PF02576 RimP N-terminal domain AM408_RS02360 PF00575 S1 RNA binding domain AM408_RS02360 PF13184 NusA-like KH domain AM408_RS02360 PF08529 NusA N-terminal domain AM408_RS02365 PF08364 Bacterial translation initiation factor IF-2 associated region AM408_RS02365 PF00009 Elongation factor Tu GTP binding domain AM408_RS02365 PF04760 Translation initiation factor IF-2, N-terminal region AM408_RS02365 PF11987 Translation-initiation factor 2 AM408_RS02370 PF02033 Ribosome-binding factor A AM408_RS02375 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM408_RS02375 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM408_RS02375 PF09157 Pseudouridine synthase II TruB, C-terminal AM408_RS02380 PF00312 Ribosomal protein S15 AM408_RS02385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM408_RS02385 PF01138 3' exoribonuclease family, domain 1 AM408_RS02385 PF03725 3' exoribonuclease family, domain 2 AM408_RS02385 PF00575 S1 RNA binding domain AM408_RS02385 PF00013 KH domain AM408_RS02390 PF13181 Tetratricopeptide repeat AM408_RS02390 PF07719 Tetratricopeptide repeat AM408_RS02395 PF12343 Cold shock protein DEAD box A AM408_RS02395 PF00271 Helicase conserved C-terminal domain AM408_RS02395 PF00270 DEAD/DEAH box helicase AM408_RS02395 PF03880 DbpA RNA binding domain AM408_RS02400 PF03222 Tryptophan/tyrosine permease family AM408_RS02405 PF00296 Luciferase-like monooxygenase AM408_RS02410 PF01136 Peptidase family U32 AM408_RS02415 PF01136 Peptidase family U32 AM408_RS02420 PF02036 SCP-2 sterol transfer family AM408_RS02425 PF13508 Acetyltransferase (GNAT) domain AM408_RS02430 PF01541 GIY-YIG catalytic domain AM408_RS02440 PF01965 DJ-1/PfpI family AM408_RS02445 PF13460 NAD(P)H-binding AM408_RS02450 PF03773 Predicted permease AM408_RS02455 PF04972 BON domain AM408_RS02460 PF13580 SIS domain AM408_RS02465 PF02021 Uncharacterised protein family UPF0102 AM408_RS02470 PF04348 LppC putative lipoprotein AM408_RS02475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM408_RS02480 PF00419 Fimbrial protein AM408_RS02485 PF00577 Outer membrane usher protein AM408_RS02485 PF13954 PapC N-terminal domain AM408_RS02485 PF13953 PapC C-terminal domain AM408_RS02490 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS02490 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS02495 PF00419 Fimbrial protein AM408_RS02500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM408_RS02505 PF03613 PTS system mannose/fructose/sorbose family IID component AM408_RS02510 PF03609 PTS system sorbose-specific iic component AM408_RS02525 PF03830 PTS system sorbose subfamily IIB component AM408_RS02530 PF01116 Fructose-bisphosphate aldolase class-II AM408_RS02535 PF01380 SIS domain AM408_RS02540 PF01979 Amidohydrolase family AM408_RS02545 PF03610 PTS system fructose IIA component AM408_RS02550 PF03613 PTS system mannose/fructose/sorbose family IID component AM408_RS02555 PF03609 PTS system sorbose-specific iic component AM408_RS02560 PF03830 PTS system sorbose subfamily IIB component AM408_RS02565 PF08013 Tagatose 6 phosphate kinase AM408_RS02575 PF08220 DeoR-like helix-turn-helix domain AM408_RS02575 PF00455 DeoR C terminal sensor domain AM408_RS02580 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system AM408_RS02585 PF15937 prlF antitoxin for toxin YhaV_toxin AM408_RS02590 PF08666 SAF domain AM408_RS02590 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM408_RS02595 PF07690 Major Facilitator Superfamily AM408_RS02600 PF03328 HpcH/HpaI aldolase/citrate lyase family AM408_RS02605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM408_RS02605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM408_RS02610 PF02595 Glycerate kinase family AM408_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS02635 PF03466 LysR substrate binding domain AM408_RS02640 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS02645 PF03222 Tryptophan/tyrosine permease family AM408_RS02650 PF00871 Acetokinase family AM408_RS02655 PF02901 Pyruvate formate lyase-like AM408_RS02655 PF01228 Glycine radical AM408_RS02660 PF01042 Endoribonuclease L-PSP AM408_RS02665 PF03315 Serine dehydratase beta chain AM408_RS02665 PF03313 Serine dehydratase alpha chain AM408_RS02675 PF03313 Serine dehydratase alpha chain AM408_RS02685 PF17954 Quercetinase C-terminal cupin domain AM408_RS02685 PF02678 Pirin AM408_RS02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS02690 PF03466 LysR substrate binding domain AM408_RS02700 PF05656 Protein of unknown function (DUF805) AM408_RS02720 PF05656 Protein of unknown function (DUF805) AM408_RS02725 PF13409 Glutathione S-transferase, N-terminal domain AM408_RS02730 PF07681 DoxX AM408_RS02735 PF13997 YqjK-like protein AM408_RS02740 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM408_RS02745 PF05957 Bacterial protein of unknown function (DUF883) AM408_RS02750 PF06476 Protein of unknown function (DUF1090) AM408_RS02755 PF13721 SecD export protein N-terminal TM region AM408_RS02760 PF09335 SNARE associated Golgi protein AM408_RS02765 PF00392 Bacterial regulatory proteins, gntR family AM408_RS02765 PF07729 FCD domain AM408_RS02770 PF07690 Major Facilitator Superfamily AM408_RS02775 PF02614 Glucuronate isomerase AM408_RS02780 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM408_RS02780 PF08666 SAF domain AM408_RS02785 PF10688 Bacterial inner membrane protein AM408_RS02790 PF00375 Sodium:dicarboxylate symporter family AM408_RS02795 PF03741 Integral membrane protein TerC family AM408_RS02800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM408_RS02805 PF02698 DUF218 domain AM408_RS02810 PF01863 Protein of unknown function DUF45 AM408_RS02815 PF05175 Methyltransferase small domain AM408_RS02825 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AM408_RS02830 PF01381 Helix-turn-helix AM408_RS02835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS02835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM408_RS02840 PF01204 Trehalase AM408_RS02850 PF13520 Amino acid permease AM408_RS02855 PF04074 YhcH/YjgK/YiaL AM408_RS02860 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM408_RS02860 PF00703 Glycosyl hydrolases family 2 AM408_RS02860 PF16353 Domain of unknown function(DUF4981) AM408_RS02860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM408_RS02860 PF02929 Beta galactosidase small chain AM408_RS02865 PF00356 Bacterial regulatory proteins, lacI family AM408_RS02875 PF01588 Putative tRNA binding domain AM408_RS02880 PF00202 Aminotransferase class-III AM408_RS02890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM408_RS02890 PF08447 PAS fold AM408_RS02895 PF03551 Transcriptional regulator PadR-like family AM408_RS02905 PF04954 Siderophore-interacting protein AM408_RS02905 PF08021 Siderophore-interacting FAD-binding domain AM408_RS02915 PF03167 Uracil DNA glycosylase superfamily AM408_RS02920 PF04545 Sigma-70, region 4 AM408_RS02920 PF04539 Sigma-70 region 3 AM408_RS02920 PF03979 Sigma-70 factor, region 1.1 AM408_RS02920 PF04542 Sigma-70 region 2 AM408_RS02920 PF00140 Sigma-70 factor, region 1.2 AM408_RS02920 PF04546 Sigma-70, non-essential region AM408_RS02930 PF08275 DNA primase catalytic core, N-terminal domain AM408_RS02930 PF08278 DNA primase DnaG DnaB-binding AM408_RS02930 PF10410 DnaB-helicase binding domain of primase AM408_RS02930 PF01807 CHC2 zinc finger AM408_RS02935 PF01165 Ribosomal protein S21 AM408_RS02945 PF00814 Glycoprotease family AM408_RS02950 PF00939 Sodium:sulfate symporter transmembrane region AM408_RS02955 PF05683 Fumarase C-terminus AM408_RS02960 PF05681 Fumarate hydratase (Fumerase) AM408_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS02970 PF03466 LysR substrate binding domain AM408_RS02975 PF02660 Glycerol-3-phosphate acyltransferase AM408_RS02980 PF02152 Dihydroneopterin aldolase AM408_RS02985 PF02673 Bacitracin resistance protein BacA AM408_RS02990 PF01966 HD domain AM408_RS02990 PF01743 Poly A polymerase head domain AM408_RS02990 PF12627 Probable RNA and SrmB- binding site of polymerase A AM408_RS02995 PF08239 Bacterial SH3 domain AM408_RS03005 PF01928 CYTH domain AM408_RS03010 PF08335 GlnD PII-uridylyltransferase AM408_RS03010 PF03710 Glutamate-ammonia ligase adenylyltransferase AM408_RS03015 PF01467 Cytidylyltransferase-like AM408_RS03015 PF00294 pfkB family carbohydrate kinase AM408_RS03025 PF15975 Flotillin AM408_RS03025 PF01145 SPFH domain / Band 7 family AM408_RS03030 PF07290 Protein of unknown function (DUF1449) AM408_RS03035 PF08971 Glycogen synthesis protein AM408_RS03045 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS03045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS03050 PF00577 Outer membrane usher protein AM408_RS03050 PF13954 PapC N-terminal domain AM408_RS03050 PF13953 PapC C-terminal domain AM408_RS03055 PF13737 Transposase DDE domain AM408_RS03060 PF13953 PapC C-terminal domain AM408_RS03060 PF00577 Outer membrane usher protein AM408_RS03060 PF13954 PapC N-terminal domain AM408_RS03065 PF00419 Fimbrial protein AM408_RS03070 PF04380 Membrane fusogenic activity AM408_RS03075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM408_RS03085 PF02535 ZIP Zinc transporter AM408_RS03090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM408_RS03095 PF03738 Glutathionylspermidine synthase preATP-grasp AM408_RS03100 PF06693 Protein of unknown function (DUF1190) AM408_RS03110 PF02321 Outer membrane efflux protein AM408_RS03115 PF00293 NUDIX domain AM408_RS03120 PF06853 Protein of unknown function (DUF1249) AM408_RS03125 PF00149 Calcineurin-like phosphoesterase AM408_RS03130 PF05728 Uncharacterised protein family (UPF0227) AM408_RS03135 PF00204 DNA gyrase B AM408_RS03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS03135 PF01751 Toprim domain AM408_RS03135 PF00986 DNA gyrase B subunit, carboxyl terminus AM408_RS03140 PF03992 Antibiotic biosynthesis monooxygenase AM408_RS03145 PF02525 Flavodoxin-like fold AM408_RS03155 PF10840 Protein of unknown function (DUF2645) AM408_RS03160 PF08521 Two-component sensor kinase N-terminal AM408_RS03160 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS03165 PF00072 Response regulator receiver domain AM408_RS03165 PF00486 Transcriptional regulatory protein, C terminal AM408_RS03170 PF04076 Bacterial OB fold (BOF) protein AM408_RS03175 PF06445 GyrI-like small molecule binding domain AM408_RS03180 PF15723 Motility quorum-sensing regulator, toxin of MqsA AM408_RS03185 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AM408_RS03190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS03195 PF03989 DNA gyrase C-terminal domain, beta-propeller AM408_RS03195 PF00521 DNA gyrase/topoisomerase IV, subunit A AM408_RS03200 PF01553 Acyltransferase AM408_RS03205 PF07732 Multicopper oxidase AM408_RS03205 PF07731 Multicopper oxidase AM408_RS03205 PF00394 Multicopper oxidase AM408_RS03210 PF11842 Domain of unknown function (DUF3362) AM408_RS03210 PF08497 Radical SAM N-terminal AM408_RS03210 PF04055 Radical SAM superfamily AM408_RS03215 PF04728 Lipoprotein leucine-zipper AM408_RS03220 PF12883 Protein of unknown function (DUF3828) AM408_RS03225 PF00248 Aldo/keto reductase family AM408_RS03230 PF00465 Iron-containing alcohol dehydrogenase AM408_RS03235 PF12833 Helix-turn-helix domain AM408_RS03235 PF06719 AraC-type transcriptional regulator N-terminus AM408_RS03240 PF09335 SNARE associated Golgi protein AM408_RS03245 PF01053 Cys/Met metabolism PLP-dependent enzyme AM408_RS03255 PF01618 MotA/TolQ/ExbB proton channel family AM408_RS03260 PF02472 Biopolymer transport protein ExbD/TolR AM408_RS03270 PF03350 Uncharacterized protein family, UPF0114 AM408_RS03275 PF00248 Aldo/keto reductase family AM408_RS03290 PF11115 Protein of unknown function (DUF2623) AM408_RS03300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM408_RS03300 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM408_RS03305 PF13247 4Fe-4S dicluster domain AM408_RS03310 PF03916 Polysulphide reductase, NrfD AM408_RS03315 PF00374 Nickel-dependent hydrogenase AM408_RS03320 PF01750 Hydrogenase maturation protease AM408_RS03325 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AM408_RS03330 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM408_RS03335 PF01455 HupF/HypC family AM408_RS03340 PF02798 Glutathione S-transferase, N-terminal domain AM408_RS03345 PF05257 CHAP domain AM408_RS03345 PF03738 Glutathionylspermidine synthase preATP-grasp AM408_RS03350 PF01384 Phosphate transporter family AM408_RS03370 PF01943 Polysaccharide biosynthesis protein AM408_RS03380 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM408_RS03385 PF03739 Lipopolysaccharide export system permease LptF/LptG AM408_RS03395 PF00155 Aminotransferase class I and II AM408_RS03400 PF00550 Phosphopantetheine attachment site AM408_RS03410 PF00501 AMP-binding enzyme AM408_RS03410 PF14535 AMP-binding enzyme C-terminal domain AM408_RS03420 PF00392 Bacterial regulatory proteins, gntR family AM408_RS03420 PF07729 FCD domain AM408_RS03425 PF02913 FAD linked oxidases, C-terminal domain AM408_RS03425 PF01565 FAD binding domain AM408_RS03430 PF01565 FAD binding domain AM408_RS03435 PF02754 Cysteine-rich domain AM408_RS03435 PF13183 4Fe-4S dicluster domain AM408_RS03440 PF03928 Haem-degrading AM408_RS03445 PF01274 Malate synthase AM408_RS03450 PF02652 L-lactate permease AM408_RS03460 PF13322 Domain of unknown function (DUF4092) AM408_RS03460 PF17291 N-terminal domain of M60-like peptidases AM408_RS03460 PF13402 Peptidase M60, enhancin and enhancin-like AM408_RS03465 PF06750 Bacterial Peptidase A24 N-terminal domain AM408_RS03465 PF01478 Type IV leader peptidase family AM408_RS03470 PF16549 Type II secretion system (T2SS) pilotin, S protein AM408_RS03475 PF11356 Type II secretion system protein C AM408_RS03480 PF03958 Bacterial type II/III secretion system short domain AM408_RS03480 PF00263 Bacterial type II and III secretion system protein AM408_RS03485 PF00437 Type II/IV secretion system protein AM408_RS03490 PF00437 Type II/IV secretion system protein AM408_RS03495 PF00482 Type II secretion system (T2SS), protein F AM408_RS03500 PF08334 Type II secretion system (T2SS), protein G AM408_RS03500 PF07963 Prokaryotic N-terminal methylation motif AM408_RS03505 PF12019 Type II transport protein GspH AM408_RS03510 PF02501 Type II secretion system (T2SS), protein I AM408_RS03510 PF07963 Prokaryotic N-terminal methylation motif AM408_RS03515 PF11612 Type II secretion system (T2SS), protein J AM408_RS03515 PF07963 Prokaryotic N-terminal methylation motif AM408_RS03520 PF03934 Type II secretion system (T2SS), protein K AM408_RS03525 PF12693 GspL periplasmic domain AM408_RS03530 PF04612 Type II secretion system (T2SS), protein M AM408_RS03550 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM408_RS03555 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM408_RS03565 PF06174 Protein of unknown function (DUF987) AM408_RS03570 PF04002 RadC-like JAB domain AM408_RS03575 PF03230 Antirestriction protein AM408_RS03580 PF06067 Domain of unknown function (DUF932) AM408_RS03585 PF06006 Bacterial protein of unknown function (DUF905) AM408_RS03595 PF13280 WYL domain AM408_RS03595 PF08220 DeoR-like helix-turn-helix domain AM408_RS03600 PF01926 50S ribosome-binding GTPase AM408_RS03635 PF14602 Hexapeptide repeat of succinyl-transferase AM408_RS03635 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS03635 PF12804 MobA-like NTP transferase domain AM408_RS03640 PF00294 pfkB family carbohydrate kinase AM408_RS03645 PF04227 Indigoidine synthase A like protein AM408_RS03650 PF01773 Na+ dependent nucleoside transporter N-terminus AM408_RS03650 PF07662 Na+ dependent nucleoside transporter C-terminus AM408_RS03655 PF00294 pfkB family carbohydrate kinase AM408_RS03680 PF13276 HTH-like domain AM408_RS03680 PF01527 Transposase AM408_RS03680 PF00665 Integrase core domain AM408_RS03695 PF08361 MAATS-type transcriptional repressor, C-terminal region AM408_RS03695 PF00440 Bacterial regulatory proteins, tetR family AM408_RS03705 PF00936 BMC domain AM408_RS03710 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM408_RS03710 PF02772 S-adenosylmethionine synthetase, central domain AM408_RS03710 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM408_RS03715 PF12833 Helix-turn-helix domain AM408_RS03720 PF06580 Histidine kinase AM408_RS03720 PF02743 Cache domain AM408_RS03720 PF00672 HAMP domain AM408_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS03730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS03750 PF04055 Radical SAM superfamily AM408_RS03755 PF02901 Pyruvate formate lyase-like AM408_RS03755 PF01228 Glycine radical AM408_RS03760 PF01965 DJ-1/PfpI family AM408_RS03770 PF00171 Aldehyde dehydrogenase family AM408_RS03775 PF00936 BMC domain AM408_RS03780 PF00936 BMC domain AM408_RS03785 PF00871 Acetokinase family AM408_RS03790 PF03928 Haem-degrading AM408_RS03795 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM408_RS03810 PF06130 Phosphate propanoyltransferase AM408_RS03815 PF00465 Iron-containing alcohol dehydrogenase AM408_RS03870 PF11922 Domain of unknown function (DUF3440) AM408_RS03870 PF01507 Phosphoadenosine phosphosulfate reductase family AM408_RS03875 PF02195 ParB-like nuclease domain AM408_RS03895 PF00270 DEAD/DEAH box helicase AM408_RS03895 PF08494 DEAD/H associated AM408_RS03895 PF00271 Helicase conserved C-terminal domain AM408_RS03915 PF13505 Outer membrane protein beta-barrel domain AM408_RS03920 PF00884 Sulfatase AM408_RS03925 PF00589 Phage integrase family AM408_RS03925 PF13356 Arm DNA-binding domain AM408_RS03935 PF04474 Protein of unknown function (DUF554) AM408_RS03945 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM408_RS03945 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM408_RS03945 PF01276 Orn/Lys/Arg decarboxylase, major domain AM408_RS03950 PF03825 Nucleoside H+ symporter AM408_RS03955 PF01464 Transglycosylase SLT domain AM408_RS03955 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM408_RS03960 PF04362 Bacterial Fe(2+) trafficking AM408_RS03965 PF14815 NUDIX domain AM408_RS03965 PF10576 Iron-sulfur binding domain of endonuclease III AM408_RS03965 PF00633 Helix-hairpin-helix motif AM408_RS03965 PF00730 HhH-GPD superfamily base excision DNA repair protein AM408_RS03975 PF02390 Putative methyltransferase AM408_RS03980 PF04320 Protein with unknown function (DUF469) AM408_RS03985 PF11101 Protein of unknown function (DUF2884) AM408_RS03990 PF17763 Glutaminase/Asparaginase C-terminal domain AM408_RS03990 PF00710 Asparaginase, N-terminal AM408_RS03995 PF06717 Protein of unknown function (DUF1202) AM408_RS04000 PF06969 HemN C-terminal domain AM408_RS04000 PF04055 Radical SAM superfamily AM408_RS04005 PF01725 Ham1 family AM408_RS04010 PF02594 Uncharacterised ACR, YggU family COG1872 AM408_RS04015 PF02325 YGGT family AM408_RS04020 PF01168 Alanine racemase, N-terminal domain AM408_RS04025 PF00437 Type II/IV secretion system protein AM408_RS04030 PF03652 Holliday junction resolvase AM408_RS04035 PF02622 Uncharacterized ACR, COG1678 AM408_RS04040 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM408_RS04040 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM408_RS04045 PF04452 RNA methyltransferase AM408_RS04050 PF04231 Endonuclease I AM408_RS04055 PF17283 SprT-like zinc ribbon domain AM408_RS04055 PF10263 SprT-like family AM408_RS04060 PF00083 Sugar (and other) transporter AM408_RS04065 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM408_RS04065 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM408_RS04065 PF02772 S-adenosylmethionine synthetase, central domain AM408_RS04075 PF17430 Uncharacterized YqgC-like AM408_RS04080 PF11036 Virulence promoting factor AM408_RS04085 PF17944 Arginine decarboxylase C-terminal helical extension AM408_RS04085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM408_RS04085 PF17810 Arginine decarboxylase helical bundle domain AM408_RS04090 PF00491 Arginase family AM408_RS04095 PF01435 Peptidase family M48 AM408_RS04100 PF02779 Transketolase, pyrimidine binding domain AM408_RS04100 PF02780 Transketolase, C-terminal domain AM408_RS04100 PF00456 Transketolase, thiamine diphosphate binding domain AM408_RS04105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS04110 PF02378 Phosphotransferase system, EIIC AM408_RS04110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS04115 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS04115 PF00107 Zinc-binding dehydrogenase AM408_RS04120 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM408_RS04125 PF05068 Mannitol repressor AM408_RS04140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM408_RS04140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM408_RS04145 PF00162 Phosphoglycerate kinase AM408_RS04150 PF01116 Fructose-bisphosphate aldolase class-II AM408_RS04155 PF00924 Mechanosensitive ion channel AM408_RS04155 PF05552 Conserved TM helix AM408_RS04160 PF01810 LysE type translocator AM408_RS04165 PF04402 Protein of unknown function (DUF541) AM408_RS04170 PF03466 LysR substrate binding domain AM408_RS04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS04175 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM408_RS04175 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM408_RS04180 PF00378 Enoyl-CoA hydratase/isomerase AM408_RS04190 PF02310 B12 binding domain AM408_RS04190 PF01642 Methylmalonyl-CoA mutase AM408_RS04200 PF03466 LysR substrate binding domain AM408_RS04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS04205 PF03466 LysR substrate binding domain AM408_RS04210 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM408_RS04215 PF01842 ACT domain AM408_RS04215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM408_RS04215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM408_RS04230 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM408_RS04240 PF05164 Cell division protein ZapA AM408_RS04250 PF03695 Uncharacterised protein family (UPF0149) AM408_RS04255 PF05195 Aminopeptidase P, N-terminal domain AM408_RS04255 PF00557 Metallopeptidase family M24 AM408_RS04260 PF01494 FAD binding domain AM408_RS04265 PF01494 FAD binding domain AM408_RS04270 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM408_RS04270 PF01571 Aminomethyltransferase folate-binding domain AM408_RS04275 PF01597 Glycine cleavage H-protein AM408_RS04280 PF02347 Glycine cleavage system P-protein AM408_RS04290 PF00232 Glycosyl hydrolase family 1 AM408_RS04295 PF04266 ASCH domain AM408_RS04300 PF03006 Haemolysin-III related AM408_RS04305 PF01571 Aminomethyltransferase folate-binding domain AM408_RS04310 PF03937 Flavinator of succinate dehydrogenase AM408_RS04315 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM408_RS04320 PF00258 Flavodoxin AM408_RS04325 PF00589 Phage integrase family AM408_RS04325 PF02899 Phage integrase, N-terminal SAM-like domain AM408_RS04330 PF13098 Thioredoxin-like domain AM408_RS04330 PF10411 Disulfide bond isomerase protein N-terminus AM408_RS04335 PF17768 RecJ OB domain AM408_RS04335 PF02272 DHHA1 domain AM408_RS04335 PF01368 DHH family AM408_RS04345 PF01336 OB-fold nucleic acid binding domain AM408_RS04345 PF00152 tRNA synthetases class II (D, K and N) AM408_RS04350 PF00293 NUDIX domain AM408_RS04360 PF00860 Permease family AM408_RS04370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM408_RS04370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS04370 PF13247 4Fe-4S dicluster domain AM408_RS04375 PF13247 4Fe-4S dicluster domain AM408_RS04380 PF00860 Permease family AM408_RS04385 PF01979 Amidohydrolase family AM408_RS04390 PF00860 Permease family AM408_RS04395 PF01799 [2Fe-2S] binding domain AM408_RS04395 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM408_RS04395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM408_RS04400 PF00941 FAD binding domain in molybdopterin dehydrogenase AM408_RS04405 PF01979 Amidohydrolase family AM408_RS04410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM408_RS04410 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS04415 PF12804 MobA-like NTP transferase domain AM408_RS04425 PF13478 XdhC Rossmann domain AM408_RS04425 PF02625 XdhC and CoxI family AM408_RS04430 PF00696 Amino acid kinase family AM408_RS04435 PF01979 Amidohydrolase family AM408_RS04440 PF01546 Peptidase family M20/M25/M40 AM408_RS04440 PF07687 Peptidase dimerisation domain AM408_RS04445 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS04450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM408_RS04450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM408_RS04455 PF02954 Bacterial regulatory protein, Fis family AM408_RS04455 PF13188 PAS domain AM408_RS04455 PF00158 Sigma-54 interaction domain AM408_RS04460 PF01799 [2Fe-2S] binding domain AM408_RS04460 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS04465 PF00941 FAD binding domain in molybdopterin dehydrogenase AM408_RS04465 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM408_RS04470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM408_RS04470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM408_RS04480 PF01476 LysM domain AM408_RS04480 PF01551 Peptidase family M23 AM408_RS04490 PF02899 Phage integrase, N-terminal SAM-like domain AM408_RS04490 PF00589 Phage integrase family AM408_RS04500 PF01695 IstB-like ATP binding protein AM408_RS04505 PF00665 Integrase core domain AM408_RS04535 PF01609 Transposase DDE domain AM408_RS04550 PF00813 FliP family AM408_RS04555 PF01313 Bacterial export proteins, family 3 AM408_RS04560 PF01311 Bacterial export proteins, family 1 AM408_RS04565 PF01312 FlhB HrpN YscU SpaS Family AM408_RS04570 PF01312 FlhB HrpN YscU SpaS Family AM408_RS04585 PF09480 Type III secretion system protein PrgH-EprH (PrgH) AM408_RS04590 PF09480 Type III secretion system protein PrgH-EprH (PrgH) AM408_RS04595 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AM408_RS04605 PF01514 Secretory protein of YscJ/FliF family AM408_RS04610 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) AM408_RS04620 PF00072 Response regulator receiver domain AM408_RS04620 PF00196 Bacterial regulatory proteins, luxR family AM408_RS04625 PF00072 Response regulator receiver domain AM408_RS04625 PF00196 Bacterial regulatory proteins, luxR family AM408_RS04645 PF00486 Transcriptional regulatory protein, C terminal AM408_RS04655 PF07720 Tetratricopeptide repeat AM408_RS04685 PF00486 Transcriptional regulatory protein, C terminal AM408_RS04690 PF00196 Bacterial regulatory proteins, luxR family AM408_RS04695 PF03222 Tryptophan/tyrosine permease family AM408_RS04700 PF02803 Thiolase, C-terminal domain AM408_RS04700 PF00108 Thiolase, N-terminal domain AM408_RS04705 PF04962 KduI/IolB family AM408_RS04715 PF00083 Sugar (and other) transporter AM408_RS04720 PF01177 Asp/Glu/Hydantoin racemase AM408_RS04725 PF03466 LysR substrate binding domain AM408_RS04725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS04730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM408_RS04730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM408_RS04735 PF00356 Bacterial regulatory proteins, lacI family AM408_RS04740 PF01553 Acyltransferase AM408_RS04740 PF00501 AMP-binding enzyme AM408_RS04745 PF07690 Major Facilitator Superfamily AM408_RS04750 PF00248 Aldo/keto reductase family AM408_RS04755 PF06004 Bacterial protein of unknown function (DUF903) AM408_RS04760 PF03741 Integral membrane protein TerC family AM408_RS04765 PF02976 DNA mismatch repair enzyme MutH AM408_RS04770 PF00293 NUDIX domain AM408_RS04775 PF01590 GAF domain AM408_RS04775 PF05524 PEP-utilising enzyme, N-terminal AM408_RS04775 PF02896 PEP-utilising enzyme, TIM barrel domain AM408_RS04775 PF00391 PEP-utilising enzyme, mobile domain AM408_RS04780 PF01790 Prolipoprotein diacylglyceryl transferase AM408_RS04785 PF00303 Thymidylate synthase AM408_RS04790 PF07963 Prokaryotic N-terminal methylation motif AM408_RS04795 PF07963 Prokaryotic N-terminal methylation motif AM408_RS04800 PF10713 Protein of unknown function (DUF2509) AM408_RS04805 PF12528 Type II secretion prepilin peptidase dependent protein C AM408_RS04805 PF07963 Prokaryotic N-terminal methylation motif AM408_RS04810 PF17946 RecC C-terminal domain AM408_RS04815 PF00675 Insulinase (Peptidase family M16) AM408_RS04815 PF16187 Middle or third domain of peptidase_M16 AM408_RS04815 PF05193 Peptidase M16 inactive domain AM408_RS04820 PF13361 UvrD-like helicase C-terminal domain AM408_RS04820 PF00580 UvrD/REP helicase N-terminal domain AM408_RS04820 PF12705 PD-(D/E)XK nuclease superfamily AM408_RS04825 PF13538 UvrD-like helicase C-terminal domain AM408_RS04830 PF00583 Acetyltransferase (GNAT) family AM408_RS04830 PF00696 Amino acid kinase family AM408_RS04835 PF11741 AMIN domain AM408_RS04835 PF01520 N-acetylmuramoyl-L-alanine amidase AM408_RS04860 PF06725 3D domain AM408_RS04860 PF03562 MltA specific insert domain AM408_RS04865 PF00899 ThiF family AM408_RS04870 PF02657 Fe-S metabolism associated domain AM408_RS04875 PF00266 Aminotransferase class-V AM408_RS04880 PF06004 Bacterial protein of unknown function (DUF903) AM408_RS04885 PF03466 LysR substrate binding domain AM408_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS04890 PF04241 Protein of unknown function (DUF423) AM408_RS04895 PF18125 RlmM ferredoxin-like domain AM408_RS04895 PF01728 FtsJ-like methyltransferase AM408_RS04900 PF00455 DeoR C terminal sensor domain AM408_RS04900 PF08220 DeoR-like helix-turn-helix domain AM408_RS04905 PF05025 RbsD / FucU transport protein family AM408_RS04910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS04910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS04915 PF02952 L-fucose isomerase, C-terminal domain AM408_RS04915 PF07882 L-fucose isomerase, second N-terminal domain AM408_RS04915 PF07881 L-fucose isomerase, first N-terminal domain AM408_RS04920 PF07690 Major Facilitator Superfamily AM408_RS04925 PF00596 Class II Aldolase and Adducin N-terminal domain AM408_RS04930 PF00465 Iron-containing alcohol dehydrogenase AM408_RS04935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM408_RS04935 PF01367 5'-3' exonuclease, C-terminal SAM fold AM408_RS04940 PF03315 Serine dehydratase beta chain AM408_RS04940 PF03313 Serine dehydratase alpha chain AM408_RS04950 PF03641 Possible lysine decarboxylase AM408_RS04950 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM408_RS04950 PF11892 Domain of unknown function (DUF3412) AM408_RS04955 PF14489 QueF-like protein AM408_RS04955 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM408_RS04960 PF07348 Syd protein (SUKH-2) AM408_RS04965 PF04287 tRNA pseudouridine synthase C AM408_RS04970 PF00849 RNA pseudouridylate synthase AM408_RS04975 PF00258 Flavodoxin AM408_RS04980 PF07690 Major Facilitator Superfamily AM408_RS04985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM408_RS04985 PF13378 Enolase C-terminal domain-like AM408_RS04990 PF13378 Enolase C-terminal domain-like AM408_RS04995 PF01627 Hpt domain AM408_RS04995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS04995 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS04995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM408_RS04995 PF00672 HAMP domain AM408_RS04995 PF00072 Response regulator receiver domain AM408_RS05000 PF01938 TRAM domain AM408_RS05000 PF05958 tRNA (Uracil-5-)-methyltransferase AM408_RS05005 PF04607 Region found in RelA / SpoT proteins AM408_RS05005 PF02824 TGS domain AM408_RS05005 PF13291 ACT domain AM408_RS05010 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM408_RS05015 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM408_RS05020 PF03819 MazG nucleotide pyrophosphohydrolase domain AM408_RS05025 PF06418 CTP synthase N-terminus AM408_RS05025 PF00117 Glutamine amidotransferase class-I AM408_RS05030 PF00113 Enolase, C-terminal TIM barrel domain AM408_RS05030 PF03952 Enolase, N-terminal domain AM408_RS05035 PF04536 TPM domain AM408_RS05045 PF04055 Radical SAM superfamily AM408_RS05050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS05050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS05055 PF07690 Major Facilitator Superfamily AM408_RS05065 PF02913 FAD linked oxidases, C-terminal domain AM408_RS05065 PF01565 FAD binding domain AM408_RS05070 PF00083 Sugar (and other) transporter AM408_RS05075 PF01012 Electron transfer flavoprotein domain AM408_RS05080 PF00766 Electron transfer flavoprotein FAD-binding domain AM408_RS05080 PF01012 Electron transfer flavoprotein domain AM408_RS05085 PF04309 Glycerol-3-phosphate responsive antiterminator AM408_RS05095 PF01266 FAD dependent oxidoreductase AM408_RS05100 PF01242 6-pyruvoyl tetrahydropterin synthase AM408_RS05105 PF00258 Flavodoxin AM408_RS05105 PF00175 Oxidoreductase NAD-binding domain AM408_RS05105 PF00667 FAD binding domain AM408_RS05110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM408_RS05110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM408_RS05115 PF01507 Phosphoadenosine phosphosulfate reductase family AM408_RS05120 PF18019 HD domain AM408_RS05120 PF00271 Helicase conserved C-terminal domain AM408_RS05120 PF00270 DEAD/DEAH box helicase AM408_RS05125 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) AM408_RS05130 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) AM408_RS05135 PF09344 CT1975-like protein AM408_RS05140 PF09704 CRISPR-associated protein (Cas_Cas5) AM408_RS05145 PF08798 CRISPR associated protein AM408_RS05150 PF01867 CRISPR associated protein Cas1 AM408_RS05155 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AM408_RS05160 PF04389 Peptidase family M28 AM408_RS05165 PF01507 Phosphoadenosine phosphosulfate reductase family AM408_RS05170 PF00009 Elongation factor Tu GTP binding domain AM408_RS05180 PF12084 Protein of unknown function (DUF3561) AM408_RS05185 PF04977 Septum formation initiator AM408_RS05190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM408_RS05195 PF02542 YgbB family AM408_RS05200 PF01142 tRNA pseudouridine synthase D (TruD) AM408_RS05205 PF01975 Survival protein SurE AM408_RS05215 PF01476 LysM domain AM408_RS05215 PF01551 Peptidase family M23 AM408_RS05220 PF00140 Sigma-70 factor, region 1.2 AM408_RS05220 PF04545 Sigma-70, region 4 AM408_RS05220 PF04542 Sigma-70 region 2 AM408_RS05220 PF04539 Sigma-70 region 3 AM408_RS05225 PF02447 GntP family permease AM408_RS05230 PF01261 Xylose isomerase-like TIM barrel AM408_RS05235 PF00596 Class II Aldolase and Adducin N-terminal domain AM408_RS05240 PF17042 Nucleotide-binding C-terminal domain AM408_RS05240 PF07005 Sugar-binding N-terminal domain AM408_RS05245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM408_RS05245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM408_RS05250 PF00455 DeoR C terminal sensor domain AM408_RS05250 PF08220 DeoR-like helix-turn-helix domain AM408_RS05255 PF00149 Calcineurin-like phosphoesterase AM408_RS05260 PF05192 MutS domain III AM408_RS05260 PF05188 MutS domain II AM408_RS05260 PF05190 MutS family domain IV AM408_RS05260 PF00488 MutS domain V AM408_RS05260 PF01624 MutS domain I AM408_RS05265 PF11756 Nitrous oxide-stimulated promoter AM408_RS05270 PF01590 GAF domain AM408_RS05270 PF00158 Sigma-54 interaction domain AM408_RS05275 PF02769 AIR synthase related protein, C-terminal domain AM408_RS05275 PF00586 AIR synthase related protein, N-terminal domain AM408_RS05280 PF01924 Hydrogenase formation hypA family AM408_RS05285 PF01455 HupF/HypC family AM408_RS05290 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM408_RS05295 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM408_RS05300 PF11046 Transcriptional repressor of hyc and hyp operons AM408_RS05310 PF13247 4Fe-4S dicluster domain AM408_RS05315 PF00361 Proton-conducting membrane transporter AM408_RS05320 PF00146 NADH dehydrogenase AM408_RS05325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM408_RS05325 PF00374 Nickel-dependent hydrogenase AM408_RS05325 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM408_RS05330 PF12838 4Fe-4S dicluster domain AM408_RS05335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM408_RS05340 PF07450 Formate hydrogenlyase maturation protein HycH AM408_RS05345 PF01750 Hydrogenase maturation protease AM408_RS05350 PF00232 Glycosyl hydrolase family 1 AM408_RS05355 PF02378 Phosphotransferase system, EIIC AM408_RS05355 PF00367 phosphotransferase system, EIIB AM408_RS05360 PF00356 Bacterial regulatory proteins, lacI family AM408_RS05365 PF13247 4Fe-4S dicluster domain AM408_RS05365 PF12800 4Fe-4S binding domain AM408_RS05370 PF01300 Telomere recombination AM408_RS05370 PF07503 HypF finger AM408_RS05370 PF00708 Acylphosphatase AM408_RS05370 PF17788 HypF Kae1-like domain AM408_RS05375 PF18113 Rubredoxin binding C-terminal domain AM408_RS05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS05380 PF00258 Flavodoxin AM408_RS05380 PF00753 Metallo-beta-lactamase superfamily AM408_RS05380 PF00301 Rubredoxin AM408_RS05385 PF01590 GAF domain AM408_RS05385 PF00158 Sigma-54 interaction domain AM408_RS05390 PF00571 CBS domain AM408_RS05390 PF01380 SIS domain AM408_RS05395 PF08220 DeoR-like helix-turn-helix domain AM408_RS05395 PF00455 DeoR C terminal sensor domain AM408_RS05400 PF06923 Glucitol operon activator protein (GutM) AM408_RS05405 PF00106 short chain dehydrogenase AM408_RS05410 PF03829 PTS system glucitol/sorbitol-specific IIA component AM408_RS05415 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM408_RS05415 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM408_RS05420 PF03608 PTS system enzyme II sorbitol-specific factor AM408_RS05425 PF13406 Transglycosylase SLT domain AM408_RS05430 PF02464 Competence-damaged protein AM408_RS05435 PF00154 recA bacterial DNA recombination protein AM408_RS05440 PF02631 RecX family AM408_RS05445 PF01411 tRNA synthetases class II (A) AM408_RS05445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM408_RS05445 PF02272 DHHA1 domain AM408_RS05450 PF02599 Global regulator protein family AM408_RS05480 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS05485 PF09335 SNARE associated Golgi protein AM408_RS05490 PF04262 Glutamate-cysteine ligase AM408_RS05495 PF02664 S-Ribosylhomocysteinase (LuxS) AM408_RS05500 PF07690 Major Facilitator Superfamily AM408_RS05505 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS05505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS05510 PF01047 MarR family AM408_RS05515 PF05437 Branched-chain amino acid transport protein (AzlD) AM408_RS05520 PF03591 AzlC protein AM408_RS05525 PF07690 Major Facilitator Superfamily AM408_RS05530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM408_RS05535 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS05540 PF00005 ABC transporter AM408_RS05540 PF00571 CBS domain AM408_RS05550 PF00268 Ribonucleotide reductase, small chain AM408_RS05555 PF08343 Ribonucleotide reductase N-terminal AM408_RS05555 PF02867 Ribonucleotide reductase, barrel domain AM408_RS05555 PF00317 Ribonucleotide reductase, all-alpha domain AM408_RS05560 PF07972 NrdI Flavodoxin like AM408_RS05565 PF00462 Glutaredoxin AM408_RS05570 PF05957 Bacterial protein of unknown function (DUF883) AM408_RS05575 PF09400 Protein of unknown function (DUF2002) AM408_RS05580 PF06610 L-alanine exporter AM408_RS05585 PF00816 H-NS histone family AM408_RS05590 PF11127 Protein of unknown function (DUF2892) AM408_RS05590 PF00581 Rhodanese-like domain AM408_RS05595 PF01022 Bacterial regulatory protein, arsR family AM408_RS05600 PF01679 Proteolipid membrane potential modulator AM408_RS05605 PF04972 BON domain AM408_RS05605 PF01476 LysM domain AM408_RS05610 PF00392 Bacterial regulatory proteins, gntR family AM408_RS05610 PF07729 FCD domain AM408_RS05615 PF00324 Amino acid permease AM408_RS05620 PF00202 Aminotransferase class-III AM408_RS05625 PF00171 Aldehyde dehydrogenase family AM408_RS05630 PF01266 FAD dependent oxidoreductase AM408_RS05635 PF08943 CsiD AM408_RS05650 PF00128 Alpha amylase, catalytic domain AM408_RS05660 PF17612 Family of unknown function (DUF5507) AM408_RS05665 PF17621 Family of unknown function (DUF5508) AM408_RS05700 PF01668 SmpB protein AM408_RS05705 PF03364 Polyketide cyclase / dehydrase and lipid transport AM408_RS05710 PF03658 RnfH family Ubiquitin AM408_RS05715 PF04355 SmpA / OmlA family AM408_RS05720 PF02463 RecF/RecN/SMC N terminal domain AM408_RS05725 PF01513 ATP-NAD kinase AM408_RS05735 PF01025 GrpE AM408_RS05740 PF03471 Transporter associated domain AM408_RS05740 PF00571 CBS domain AM408_RS05740 PF01595 Cyclin M transmembrane N-terminal domain AM408_RS05745 PF01578 Cytochrome C assembly protein AM408_RS05750 PF02978 Signal peptide binding domain AM408_RS05750 PF00448 SRP54-type protein, GTPase domain AM408_RS05750 PF02881 SRP54-type protein, helical bundle domain AM408_RS05755 PF00886 Ribosomal protein S16 AM408_RS05760 PF05239 PRC-barrel domain AM408_RS05760 PF01782 RimM N-terminal domain AM408_RS05765 PF01746 tRNA (Guanine-1)-methyltransferase AM408_RS05770 PF01245 Ribosomal protein L19 AM408_RS05775 PF00691 OmpA family AM408_RS05780 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS05780 PF17152 Periplasmic sensor domain AM408_RS05785 PF13689 YfiR/HmsC-like AM408_RS05790 PF10973 Protein of unknown function (DUF2799) AM408_RS05795 PF00793 DAHP synthetase I family AM408_RS05800 PF02153 Prephenate dehydrogenase AM408_RS05800 PF01817 Chorismate mutase type II AM408_RS05805 PF01817 Chorismate mutase type II AM408_RS05805 PF00800 Prephenate dehydratase AM408_RS05810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM408_RS05820 PF13525 Outer membrane lipoprotein AM408_RS05825 PF00849 RNA pseudouridylate synthase AM408_RS05825 PF01479 S4 domain AM408_RS05830 PF02578 Multi-copper polyphenol oxidoreductase laccase AM408_RS05835 PF02861 Clp amino terminal domain, pathogenicity island component AM408_RS05835 PF17871 AAA lid domain AM408_RS05835 PF10431 C-terminal, D2-small domain, of ClpB protein AM408_RS05835 PF07724 AAA domain (Cdc48 subfamily) AM408_RS05835 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS05865 PF00083 Sugar (and other) transporter AM408_RS05870 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM408_RS05875 PF13091 PLD-like domain AM408_RS05880 PF13607 Succinyl-CoA ligase like flavodoxin domain AM408_RS05880 PF00583 Acetyltransferase (GNAT) family AM408_RS05880 PF13380 CoA binding domain AM408_RS05885 PF03942 DTW domain AM408_RS05890 PF00085 Thioredoxin AM408_RS05900 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM408_RS05900 PF00588 SpoU rRNA Methylase family AM408_RS05905 PF03167 Uracil DNA glycosylase superfamily AM408_RS05910 PF01228 Glycine radical AM408_RS05915 PF01810 LysE type translocator AM408_RS05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS05920 PF03466 LysR substrate binding domain AM408_RS05925 PF00271 Helicase conserved C-terminal domain AM408_RS05925 PF00270 DEAD/DEAH box helicase AM408_RS05930 PF05175 Methyltransferase small domain AM408_RS05935 PF00890 FAD binding domain AM408_RS05935 PF02910 Fumarate reductase flavoprotein C-term AM408_RS05940 PF08281 Sigma-70, region 4 AM408_RS05940 PF04542 Sigma-70 region 2 AM408_RS05945 PF03873 Anti sigma-E protein RseA, C-terminal domain AM408_RS05945 PF03872 Anti sigma-E protein RseA, N-terminal domain AM408_RS05950 PF17188 MucB/RseB C-terminal domain AM408_RS05950 PF03888 MucB/RseB N-terminal domain AM408_RS05960 PF06421 GTP-binding protein LepA C-terminus AM408_RS05960 PF03144 Elongation factor Tu domain 2 AM408_RS05960 PF00679 Elongation factor G C-terminus AM408_RS05960 PF00009 Elongation factor Tu GTP binding domain AM408_RS05965 PF10502 Signal peptidase, peptidase S26 AM408_RS05975 PF00035 Double-stranded RNA binding motif AM408_RS05975 PF14622 Ribonuclease-III-like AM408_RS05980 PF07650 KH domain AM408_RS05980 PF01926 50S ribosome-binding GTPase AM408_RS05985 PF02565 Recombination protein O C terminal AM408_RS05985 PF11967 Recombination protein O N terminal AM408_RS05990 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM408_RS05995 PF01648 4'-phosphopantetheinyl transferase superfamily AM408_RS06015 PF12838 4Fe-4S dicluster domain AM408_RS06020 PF01418 Helix-turn-helix domain, rpiR family AM408_RS06020 PF01380 SIS domain AM408_RS06030 PF14437 MafB19-like deaminase AM408_RS06035 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS06035 PF01464 Transglycosylase SLT domain AM408_RS06045 PF02769 AIR synthase related protein, C-terminal domain AM408_RS06045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM408_RS06045 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM408_RS06050 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS06055 PF13942 YfhG lipoprotein AM408_RS06060 PF00158 Sigma-54 interaction domain AM408_RS06060 PF00072 Response regulator receiver domain AM408_RS06065 PF00543 Nitrogen regulatory protein P-II AM408_RS06070 PF00970 Oxidoreductase FAD-binding domain AM408_RS06070 PF00042 Globin AM408_RS06070 PF00175 Oxidoreductase NAD-binding domain AM408_RS06075 PF00464 Serine hydroxymethyltransferase AM408_RS06080 PF00480 ROK family AM408_RS06085 PF13181 Tetratricopeptide repeat AM408_RS06085 PF17128 Domain of unknown function (DUF5107) AM408_RS06090 PF13407 Periplasmic binding protein domain AM408_RS06095 PF00005 ABC transporter AM408_RS06100 PF02653 Branched-chain amino acid transport system / permease component AM408_RS06105 PF00107 Zinc-binding dehydrogenase AM408_RS06105 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS06110 PF01263 Aldose 1-epimerase AM408_RS06115 PF07681 DoxX AM408_RS06120 PF14759 Reductase C-terminal AM408_RS06120 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS06125 PF00106 short chain dehydrogenase AM408_RS06130 PF00355 Rieske [2Fe-2S] domain AM408_RS06135 PF00866 Ring hydroxylating beta subunit AM408_RS06140 PF00355 Rieske [2Fe-2S] domain AM408_RS06140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM408_RS06145 PF03466 LysR substrate binding domain AM408_RS06145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS06150 PF12832 MFS_1 like family AM408_RS06155 PF00874 PRD domain AM408_RS06160 PF12146 Serine aminopeptidase, S33 AM408_RS06165 PF00459 Inositol monophosphatase family AM408_RS06170 PF00588 SpoU rRNA Methylase family AM408_RS06175 PF02082 Transcriptional regulator AM408_RS06180 PF00266 Aminotransferase class-V AM408_RS06185 PF01592 NifU-like N terminal domain AM408_RS06190 PF01521 Iron-sulphur cluster biosynthesis AM408_RS06195 PF07743 HSCB C-terminal oligomerisation domain AM408_RS06200 PF00012 Hsp70 protein AM408_RS06205 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS06210 PF04384 Iron-sulphur cluster assembly AM408_RS06215 PF12404 Peptidase AM408_RS06215 PF00883 Cytosol aminopeptidase family, catalytic domain AM408_RS06220 PF07179 SseB protein N-terminal domain AM408_RS06220 PF14581 SseB protein C-terminal domain AM408_RS06225 PF00581 Rhodanese-like domain AM408_RS06230 PF00207 Alpha-2-macroglobulin family AM408_RS06230 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM408_RS06230 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM408_RS06230 PF17962 Bacterial macroglobulin domain 6 AM408_RS06230 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM408_RS06230 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM408_RS06230 PF01835 MG2 domain AM408_RS06230 PF07703 Alpha-2-macroglobulin bait region domain AM408_RS06230 PF07678 A-macroglobulin TED domain AM408_RS06235 PF00912 Transglycosylase AM408_RS06235 PF06832 Penicillin-Binding Protein C-terminus Family AM408_RS06235 PF00905 Penicillin binding protein transpeptidase domain AM408_RS06240 PF00334 Nucleoside diphosphate kinase AM408_RS06245 PF04055 Radical SAM superfamily AM408_RS06250 PF13464 Domain of unknown function (DUF4115) AM408_RS06255 PF04551 GcpE protein AM408_RS06260 PF03129 Anticodon binding domain AM408_RS06260 PF13393 Histidyl-tRNA synthetase AM408_RS06265 PF09976 Tetratricopeptide repeat-like domain AM408_RS06270 PF13360 PQQ-like domain AM408_RS06275 PF01926 50S ribosome-binding GTPase AM408_RS06275 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM408_RS06280 PF07191 zinc-ribbons AM408_RS06285 PF02601 Exonuclease VII, large subunit AM408_RS06285 PF13742 OB-fold nucleic acid binding domain AM408_RS06290 PF00478 IMP dehydrogenase / GMP reductase domain AM408_RS06290 PF00571 CBS domain AM408_RS06295 PF00117 Glutamine amidotransferase class-I AM408_RS06295 PF02540 NAD synthase AM408_RS06295 PF00958 GMP synthase C terminal domain AM408_RS06300 PF17358 Family of unknown function (DUF5384) AM408_RS06305 PF05433 Glycine zipper 2TM domain AM408_RS06315 PF11119 Protein of unknown function (DUF2633) AM408_RS06325 PF05231 MASE1 AM408_RS06325 PF00563 EAL domain AM408_RS06330 PF02541 Ppx/GppA phosphatase family AM408_RS06335 PF02503 Polyphosphate kinase middle domain AM408_RS06335 PF13090 Polyphosphate kinase C-terminal domain 2 AM408_RS06335 PF17941 Polyphosphate kinase C-terminal domain 1 AM408_RS06335 PF13089 Polyphosphate kinase N-terminal domain AM408_RS06340 PF00551 Formyl transferase AM408_RS06345 PF00586 AIR synthase related protein, N-terminal domain AM408_RS06345 PF02769 AIR synthase related protein, C-terminal domain AM408_RS06360 PF00860 Permease family AM408_RS06365 PF00308 Bacterial dnaA protein AM408_RS06370 PF03960 ArsC family AM408_RS06375 PF01435 Peptidase family M48 AM408_RS06380 PF01594 AI-2E family transporter AM408_RS06385 PF01226 Formate/nitrite transporter AM408_RS06390 PF01590 GAF domain AM408_RS06390 PF00158 Sigma-54 interaction domain AM408_RS06395 PF07450 Formate hydrogenlyase maturation protein HycH AM408_RS06400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM408_RS06405 PF12838 4Fe-4S dicluster domain AM408_RS06410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM408_RS06410 PF00374 Nickel-dependent hydrogenase AM408_RS06410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM408_RS06415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM408_RS06415 PF00361 Proton-conducting membrane transporter AM408_RS06420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM408_RS06425 PF00361 Proton-conducting membrane transporter AM408_RS06425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM408_RS06430 PF00146 NADH dehydrogenase AM408_RS06435 PF00361 Proton-conducting membrane transporter AM408_RS06440 PF00037 4Fe-4S binding domain AM408_RS06440 PF12798 4Fe-4S binding domain AM408_RS06445 PF00578 AhpC/TSA family AM408_RS06450 PF01842 ACT domain AM408_RS06455 PF00701 Dihydrodipicolinate synthetase family AM408_RS06460 PF06804 NlpB/DapX lipoprotein AM408_RS06465 PF01259 SAICAR synthetase AM408_RS06470 PF04228 Putative neutral zinc metallopeptidase AM408_RS06475 PF17176 tRNA-binding domain AM408_RS06475 PF05127 Helicase AM408_RS06475 PF13718 GNAT acetyltransferase 2 AM408_RS06475 PF08351 Domain of unknown function (DUF1726) AM408_RS06480 PF02230 Phospholipase/Carboxylesterase AM408_RS06485 PF13980 Uncharacterised protein family (UPF0370) AM408_RS06490 PF07687 Peptidase dimerisation domain AM408_RS06490 PF01546 Peptidase family M20/M25/M40 AM408_RS06495 PF03960 ArsC family AM408_RS06505 PF00873 AcrB/AcrD/AcrF family AM408_RS06510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS06510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM408_RS06510 PF07730 Histidine kinase AM408_RS06510 PF00672 HAMP domain AM408_RS06515 PF13247 4Fe-4S dicluster domain AM408_RS06515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM408_RS06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS06520 PF00293 NUDIX domain AM408_RS06525 PF06674 Protein of unknown function (DUF1176) AM408_RS06530 PF00456 Transketolase, thiamine diphosphate binding domain AM408_RS06530 PF02780 Transketolase, C-terminal domain AM408_RS06530 PF02779 Transketolase, pyrimidine binding domain AM408_RS06535 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM408_RS06545 PF01515 Phosphate acetyl/butaryl transferase AM408_RS06545 PF00390 Malic enzyme, N-terminal domain AM408_RS06545 PF03949 Malic enzyme, NAD binding domain AM408_RS06550 PF00936 BMC domain AM408_RS06555 PF10662 Ethanolamine utilisation - propanediol utilisation AM408_RS06560 PF06249 Ethanolamine utilisation protein EutQ AM408_RS06565 PF01923 Cobalamin adenosyltransferase AM408_RS06570 PF01515 Phosphate acetyl/butaryl transferase AM408_RS06575 PF00936 BMC domain AM408_RS06580 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM408_RS06585 PF00171 Aldehyde dehydrogenase family AM408_RS06595 PF00465 Iron-containing alcohol dehydrogenase AM408_RS06600 PF04346 Ethanolamine utilisation protein, EutH AM408_RS06605 PF06277 Ethanolamine utilisation protein EutA AM408_RS06610 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM408_RS06615 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM408_RS06620 PF00936 BMC domain AM408_RS06625 PF16365 Ethanolamine utilization protein EutK C-terminus AM408_RS06625 PF00936 BMC domain AM408_RS06630 PF12833 Helix-turn-helix domain AM408_RS06635 PF01218 Coproporphyrinogen III oxidase AM408_RS06640 PF01520 N-acetylmuramoyl-L-alanine amidase AM408_RS06645 PF00583 Acetyltransferase (GNAT) family AM408_RS06650 PF11143 Protein of unknown function (DUF2919) AM408_RS06655 PF06572 Protein of unknown function (DUF1131) AM408_RS06660 PF04261 Dyp-type peroxidase family AM408_RS06665 PF00144 Beta-lactamase AM408_RS06670 PF00367 phosphotransferase system, EIIB AM408_RS06670 PF02378 Phosphotransferase system, EIIC AM408_RS06675 PF01380 SIS domain AM408_RS06680 PF01380 SIS domain AM408_RS06680 PF01418 Helix-turn-helix domain, rpiR family AM408_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS06705 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS06710 PF00005 ABC transporter AM408_RS06715 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS06720 PF05406 WGR domain AM408_RS06725 PF17263 Family of unknown function (DUF5329) AM408_RS06730 PF08543 Phosphomethylpyrimidine kinase AM408_RS06735 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM408_RS06740 PF05524 PEP-utilising enzyme, N-terminal AM408_RS06740 PF02896 PEP-utilising enzyme, TIM barrel domain AM408_RS06740 PF00391 PEP-utilising enzyme, mobile domain AM408_RS06745 PF00381 PTS HPr component phosphorylation site AM408_RS06750 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS06760 PF04354 ZipA, C-terminal FtsZ-binding domain AM408_RS06765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM408_RS06765 PF00533 BRCA1 C Terminus (BRCT) domain AM408_RS06765 PF01653 NAD-dependent DNA ligase adenylation domain AM408_RS06765 PF12826 Helix-hairpin-helix motif AM408_RS06765 PF03120 NAD-dependent DNA ligase OB-fold domain AM408_RS06770 PF12843 Putative quorum-sensing-regulated virulence factor AM408_RS06775 PF13593 SBF-like CPA transporter family (DUF4137) AM408_RS06780 PF03466 LysR substrate binding domain AM408_RS06780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS06785 PF03502 Nucleoside-specific channel-forming protein, Tsx AM408_RS06790 PF01048 Phosphorylase superfamily AM408_RS06795 PF03825 Nucleoside H+ symporter AM408_RS06805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS06805 PF03466 LysR substrate binding domain AM408_RS06830 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM408_RS06835 PF07037 Putative transcription regulator (DUF1323) AM408_RS06840 PF07037 Putative transcription regulator (DUF1323) AM408_RS06855 PF00563 EAL domain AM408_RS06855 PF05231 MASE1 AM408_RS06860 PF01609 Transposase DDE domain AM408_RS06865 PF01773 Na+ dependent nucleoside transporter N-terminus AM408_RS06865 PF07662 Na+ dependent nucleoside transporter C-terminus AM408_RS06865 PF07670 Nucleoside recognition AM408_RS06870 PF01566 Natural resistance-associated macrophage protein AM408_RS06875 PF10697 Protein of unknown function (DUF2502) AM408_RS06880 PF00654 Voltage gated chloride channel AM408_RS06885 PF02685 Glucokinase AM408_RS06890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS06895 PF02378 Phosphotransferase system, EIIC AM408_RS06900 PF00557 Metallopeptidase family M24 AM408_RS06900 PF01321 Creatinase/Prolidase N-terminal domain AM408_RS06905 PF05343 M42 glutamyl aminopeptidase AM408_RS06910 PF05524 PEP-utilising enzyme, N-terminal AM408_RS06910 PF00391 PEP-utilising enzyme, mobile domain AM408_RS06910 PF02896 PEP-utilising enzyme, TIM barrel domain AM408_RS06910 PF00381 PTS HPr component phosphorylation site AM408_RS06910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS06920 PF04397 LytTr DNA-binding domain AM408_RS06920 PF00072 Response regulator receiver domain AM408_RS06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS06925 PF07694 5TMR of 5TMR-LYT AM408_RS06925 PF06580 Histidine kinase AM408_RS06930 PF00155 Aminotransferase class I and II AM408_RS06940 PF03279 Bacterial lipid A biosynthesis acyltransferase AM408_RS06945 PF10810 Protein of unknown function (DUF2545) AM408_RS06955 PF10938 YfdX protein AM408_RS06960 PF02515 CoA-transferase family III AM408_RS06965 PF00205 Thiamine pyrophosphate enzyme, central domain AM408_RS06965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM408_RS06965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS06970 PF03547 Membrane transport protein AM408_RS06975 PF02515 CoA-transferase family III AM408_RS06980 PF01627 Hpt domain AM408_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS06980 PF00072 Response regulator receiver domain AM408_RS06980 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS06980 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS06985 PF00196 Bacterial regulatory proteins, luxR family AM408_RS06985 PF00072 Response regulator receiver domain AM408_RS06990 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS06990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS06995 PF07690 Major Facilitator Superfamily AM408_RS07000 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS07005 PF02447 GntP family permease AM408_RS07010 PF00356 Bacterial regulatory proteins, lacI family AM408_RS07010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM408_RS07015 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM408_RS07015 PF08244 Glycosyl hydrolases family 32 C terminal AM408_RS07020 PF00294 pfkB family carbohydrate kinase AM408_RS07025 PF01306 LacY proton/sugar symporter AM408_RS07035 PF01226 Formate/nitrite transporter AM408_RS07045 PF04333 MlaA lipoprotein AM408_RS07060 PF02371 Transposase IS116/IS110/IS902 family AM408_RS07060 PF01548 Transposase AM408_RS07065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM408_RS07075 PF04175 Protein of unknown function (DUF406) AM408_RS07080 PF00108 Thiolase, N-terminal domain AM408_RS07080 PF02803 Thiolase, C-terminal domain AM408_RS07085 PF00378 Enoyl-CoA hydratase/isomerase AM408_RS07085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM408_RS07085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM408_RS07090 PF00300 Histidine phosphatase superfamily (branch 1) AM408_RS07095 PF00419 Fimbrial protein AM408_RS07100 PF13953 PapC C-terminal domain AM408_RS07100 PF13954 PapC N-terminal domain AM408_RS07100 PF00577 Outer membrane usher protein AM408_RS07105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS07105 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS07110 PF00419 Fimbrial protein AM408_RS07115 PF00419 Fimbrial protein AM408_RS07120 PF00419 Fimbrial protein AM408_RS07125 PF11245 Protein of unknown function (DUF2544) AM408_RS07130 PF01713 Smr domain AM408_RS07135 PF05175 Methyltransferase small domain AM408_RS07140 PF01264 Chorismate synthase AM408_RS07145 PF03411 Penicillin-insensitive murein endopeptidase AM408_RS07150 PF01925 Sulfite exporter TauE/SafE AM408_RS07155 PF04315 Elongation factor P hydroxylase AM408_RS07160 PF08891 YfcL protein AM408_RS07165 PF01266 FAD dependent oxidoreductase AM408_RS07165 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM408_RS07170 PF02801 Beta-ketoacyl synthase, C-terminal domain AM408_RS07170 PF00109 Beta-ketoacyl synthase, N-terminal domain AM408_RS07180 PF07690 Major Facilitator Superfamily AM408_RS07190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM408_RS07190 PF11890 Domain of unknown function (DUF3410) AM408_RS07190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM408_RS07195 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM408_RS07195 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM408_RS07200 PF01416 tRNA pseudouridine synthase AM408_RS07205 PF09335 SNARE associated Golgi protein AM408_RS07210 PF17848 Acetyl-coA carboxylase zinc finger domain AM408_RS07210 PF01039 Carboxyl transferase domain AM408_RS07215 PF08245 Mur ligase middle domain AM408_RS07215 PF02875 Mur ligase family, glutamate ligase domain AM408_RS07220 PF05036 Sporulation related domain AM408_RS07225 PF02674 Colicin V production protein AM408_RS07230 PF00156 Phosphoribosyl transferase domain AM408_RS07235 PF02441 Flavoprotein AM408_RS07240 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS07245 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS07255 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS07260 PF00005 ABC transporter AM408_RS07265 PF04754 Putative transposase, YhgA-like AM408_RS07270 PF08338 Domain of unknown function (DUF1731) AM408_RS07270 PF01370 NAD dependent epimerase/dehydratase family AM408_RS07275 PF02152 Dihydroneopterin aldolase AM408_RS07280 PF02798 Glutathione S-transferase, N-terminal domain AM408_RS07280 PF00043 Glutathione S-transferase, C-terminal domain AM408_RS07285 PF02798 Glutathione S-transferase, N-terminal domain AM408_RS07285 PF14834 Glutathione S-transferase, C-terminal domain AM408_RS07290 PF12850 Calcineurin-like phosphoesterase superfamily domain AM408_RS07295 PF00293 NUDIX domain AM408_RS07300 PF03606 C4-dicarboxylate anaerobic carrier AM408_RS07305 PF01515 Phosphate acetyl/butaryl transferase AM408_RS07305 PF07085 DRTGG domain AM408_RS07310 PF00871 Acetokinase family AM408_RS07315 PF04217 Protein of unknown function, DUF412 AM408_RS07320 PF03887 YfbU domain AM408_RS07325 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS07330 PF02080 TrkA-C domain AM408_RS07330 PF03600 Citrate transporter AM408_RS07340 PF00155 Aminotransferase class I and II AM408_RS07350 PF03466 LysR substrate binding domain AM408_RS07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS07355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM408_RS07360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM408_RS07365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM408_RS07365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM408_RS07375 PF10531 SLBB domain AM408_RS07375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM408_RS07375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM408_RS07380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM408_RS07380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM408_RS07380 PF01568 Molydopterin dinucleotide binding domain AM408_RS07380 PF00384 Molybdopterin oxidoreductase AM408_RS07385 PF00146 NADH dehydrogenase AM408_RS07390 PF12838 4Fe-4S dicluster domain AM408_RS07395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM408_RS07400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM408_RS07405 PF00361 Proton-conducting membrane transporter AM408_RS07405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM408_RS07410 PF00361 Proton-conducting membrane transporter AM408_RS07415 PF00361 Proton-conducting membrane transporter AM408_RS07435 PF08974 Domain of unknown function (DUF1877) AM408_RS07440 PF04389 Peptidase family M28 AM408_RS07445 PF12034 Domain of unknown function (DUF3520) AM408_RS07445 PF00092 von Willebrand factor type A domain AM408_RS07445 PF12450 von Willebrand factor AM408_RS07450 PF02902 Ulp1 protease family, C-terminal catalytic domain AM408_RS07455 PF12706 Beta-lactamase superfamily domain AM408_RS07460 PF13673 Acetyltransferase (GNAT) domain AM408_RS07465 PF05957 Bacterial protein of unknown function (DUF883) AM408_RS07470 PF00425 chorismate binding enzyme AM408_RS07475 PF16582 Middle domain of thiamine pyrophosphate AM408_RS07475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM408_RS07475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS07480 PF12697 Alpha/beta hydrolase family AM408_RS07485 PF00378 Enoyl-CoA hydratase/isomerase AM408_RS07490 PF13378 Enolase C-terminal domain-like AM408_RS07495 PF13193 AMP-binding enzyme C-terminal domain AM408_RS07495 PF00501 AMP-binding enzyme AM408_RS07510 PF00892 EamA-like transporter family AM408_RS07515 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM408_RS07520 PF01522 Polysaccharide deacetylase AM408_RS07525 PF00551 Formyl transferase AM408_RS07525 PF02911 Formyl transferase, C-terminal domain AM408_RS07525 PF01370 NAD dependent epimerase/dehydratase family AM408_RS07530 PF00535 Glycosyl transferase family 2 AM408_RS07535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM408_RS07540 PF00300 Histidine phosphatase superfamily (branch 1) AM408_RS07545 PF00293 NUDIX domain AM408_RS07550 PF07437 YfaZ precursor AM408_RS07555 PF00994 Probable molybdopterin binding domain AM408_RS07560 PF09339 IclR helix-turn-helix domain AM408_RS07560 PF01614 Bacterial transcriptional regulator AM408_RS07565 PF01614 Bacterial transcriptional regulator AM408_RS07565 PF09339 IclR helix-turn-helix domain AM408_RS07570 PF13378 Enolase C-terminal domain-like AM408_RS07570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM408_RS07575 PF07690 Major Facilitator Superfamily AM408_RS07580 PF03328 HpcH/HpaI aldolase/citrate lyase family AM408_RS07590 PF04754 Putative transposase, YhgA-like AM408_RS07595 PF02754 Cysteine-rich domain AM408_RS07595 PF13183 4Fe-4S dicluster domain AM408_RS07600 PF00890 FAD binding domain AM408_RS07605 PF01266 FAD dependent oxidoreductase AM408_RS07605 PF04324 BFD-like [2Fe-2S] binding domain AM408_RS07610 PF07690 Major Facilitator Superfamily AM408_RS07615 PF03009 Glycerophosphoryl diester phosphodiesterase family AM408_RS07635 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS07640 PF00268 Ribonucleotide reductase, small chain AM408_RS07645 PF03477 ATP cone domain AM408_RS07645 PF00317 Ribonucleotide reductase, all-alpha domain AM408_RS07645 PF02867 Ribonucleotide reductase, barrel domain AM408_RS07655 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat AM408_RS07655 PF03797 Autotransporter beta-domain AM408_RS07655 PF12951 Passenger-associated-transport-repeat AM408_RS07665 PF03989 DNA gyrase C-terminal domain, beta-propeller AM408_RS07665 PF00521 DNA gyrase/topoisomerase IV, subunit A AM408_RS07670 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) AM408_RS07675 PF06672 Protein of unknown function (DUF1175) AM408_RS07680 PF07703 Alpha-2-macroglobulin bait region domain AM408_RS07680 PF00207 Alpha-2-macroglobulin family AM408_RS07680 PF01835 MG2 domain AM408_RS07685 PF08486 Stage II sporulation protein AM408_RS07685 PF10062 Predicted secreted protein (DUF2300) AM408_RS07690 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) AM408_RS07695 PF00108 Thiolase, N-terminal domain AM408_RS07695 PF02803 Thiolase, C-terminal domain AM408_RS07700 PF02667 Short chain fatty acid transporter AM408_RS07705 PF01144 Coenzyme A transferase AM408_RS07710 PF01144 Coenzyme A transferase AM408_RS07715 PF02954 Bacterial regulatory protein, Fis family AM408_RS07715 PF00072 Response regulator receiver domain AM408_RS07715 PF00158 Sigma-54 interaction domain AM408_RS07720 PF00989 PAS fold AM408_RS07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS07720 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS07725 PF09456 RcsC Alpha-Beta-Loop (ABL) AM408_RS07725 PF00072 Response regulator receiver domain AM408_RS07725 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS07730 PF00196 Bacterial regulatory proteins, luxR family AM408_RS07730 PF00072 Response regulator receiver domain AM408_RS07735 PF16359 RcsD-ABL domain AM408_RS07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS07735 PF01627 Hpt domain AM408_RS07750 PF00267 Gram-negative porin AM408_RS07755 PF02424 ApbE family AM408_RS07760 PF02805 Metal binding domain of Ada AM408_RS07760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM408_RS07760 PF12833 Helix-turn-helix domain AM408_RS07760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM408_RS07765 PF13532 2OG-Fe(II) oxygenase superfamily AM408_RS07770 PF00005 ABC transporter AM408_RS07775 PF06039 Malate:quinone oxidoreductase (Mqo) AM408_RS07780 PF03974 Ecotin AM408_RS07790 PF00037 4Fe-4S binding domain AM408_RS07790 PF12800 4Fe-4S binding domain AM408_RS07790 PF13187 4Fe-4S dicluster domain AM408_RS07795 PF03927 NapD protein AM408_RS07800 PF00384 Molybdopterin oxidoreductase AM408_RS07800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM408_RS07800 PF01568 Molydopterin dinucleotide binding domain AM408_RS07805 PF12800 4Fe-4S binding domain AM408_RS07805 PF12838 4Fe-4S dicluster domain AM408_RS07810 PF12801 4Fe-4S binding domain AM408_RS07810 PF13237 4Fe-4S dicluster domain AM408_RS07815 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AM408_RS07820 PF03264 NapC/NirT cytochrome c family, N-terminal region AM408_RS07825 PF00005 ABC transporter AM408_RS07830 PF03379 CcmB protein AM408_RS07835 PF01578 Cytochrome C assembly protein AM408_RS07840 PF04995 Heme exporter protein D (CcmD) AM408_RS07845 PF03100 CcmE AM408_RS07850 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM408_RS07850 PF01578 Cytochrome C assembly protein AM408_RS07855 PF08534 Redoxin AM408_RS07860 PF03918 Cytochrome C biogenesis protein AM408_RS07865 PF00196 Bacterial regulatory proteins, luxR family AM408_RS07865 PF00072 Response regulator receiver domain AM408_RS07875 PF03797 Autotransporter beta-domain AM408_RS07875 PF16168 Adhesin of bacterial autotransporter system, probable stalk AM408_RS07875 PF03212 Pertactin AM408_RS07885 PF11893 Domain of unknown function (DUF3413) AM408_RS07885 PF00884 Sulfatase AM408_RS07890 PF07208 Protein of unknown function (DUF1414) AM408_RS07895 PF04245 37-kD nucleoid-associated bacterial protein AM408_RS07900 PF01386 Ribosomal L25p family AM408_RS07905 PF00271 Helicase conserved C-terminal domain AM408_RS07905 PF04851 Type III restriction enzyme, res subunit AM408_RS07915 PF01479 S4 domain AM408_RS07915 PF00849 RNA pseudouridylate synthase AM408_RS07920 PF07690 Major Facilitator Superfamily AM408_RS07930 PF13989 YejG-like protein AM408_RS07935 PF00005 ABC transporter AM408_RS07935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS07940 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS07940 PF12911 N-terminal TM domain of oligopeptide transport permease C AM408_RS07945 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS07950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS07955 PF00563 EAL domain AM408_RS07955 PF12792 CSS motif domain associated with EAL AM408_RS07960 PF00877 NlpC/P60 family AM408_RS07965 PF01569 PAP2 superfamily AM408_RS07970 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM408_RS07970 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM408_RS07975 PF01232 Mannitol dehydrogenase Rossmann domain AM408_RS07975 PF08125 Mannitol dehydrogenase C-terminal domain AM408_RS07980 PF01132 Elongation factor P (EF-P) OB domain AM408_RS07980 PF08207 Elongation factor P (EF-P) KOW-like domain AM408_RS07980 PF09285 Elongation factor P, C-terminal AM408_RS07985 PF03692 Putative zinc- or iron-chelating domain AM408_RS07990 PF07690 Major Facilitator Superfamily AM408_RS07995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS07995 PF00381 PTS HPr component phosphorylation site AM408_RS08000 PF00294 pfkB family carbohydrate kinase AM408_RS08005 PF02378 Phosphotransferase system, EIIC AM408_RS08005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS08010 PF00294 pfkB family carbohydrate kinase AM408_RS08015 PF04227 Indigoidine synthase A like protein AM408_RS08020 PF01773 Na+ dependent nucleoside transporter N-terminus AM408_RS08020 PF07662 Na+ dependent nucleoside transporter C-terminus AM408_RS08025 PF00027 Cyclic nucleotide-binding domain AM408_RS08030 PF01156 Inosine-uridine preferring nucleoside hydrolase AM408_RS08035 PF07662 Na+ dependent nucleoside transporter C-terminus AM408_RS08035 PF01773 Na+ dependent nucleoside transporter N-terminus AM408_RS08040 PF00294 pfkB family carbohydrate kinase AM408_RS08045 PF01261 Xylose isomerase-like TIM barrel AM408_RS08050 PF03601 Conserved hypothetical protein 698 AM408_RS08055 PF03466 LysR substrate binding domain AM408_RS08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS08065 PF00324 Amino acid permease AM408_RS08080 PF00756 Putative esterase AM408_RS08095 PF01227 GTP cyclohydrolase I AM408_RS08100 PF04235 Protein of unknown function (DUF418) AM408_RS08110 PF00356 Bacterial regulatory proteins, lacI family AM408_RS08115 PF13407 Periplasmic binding protein domain AM408_RS08120 PF00005 ABC transporter AM408_RS08125 PF02653 Branched-chain amino acid transport system / permease component AM408_RS08130 PF01180 Dihydroorotate dehydrogenase AM408_RS08135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM408_RS08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS08145 PF10808 Protein of unknown function (DUF2542) AM408_RS08150 PF02698 DUF218 domain AM408_RS08155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM408_RS08155 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM408_RS08160 PF04172 LrgB-like family AM408_RS08165 PF03788 LrgA family AM408_RS08170 PF01207 Dihydrouridine synthase (Dus) AM408_RS08190 PF02321 Outer membrane efflux protein AM408_RS08200 PF09335 SNARE associated Golgi protein AM408_RS08205 PF04893 Yip1 domain AM408_RS08210 PF00768 D-alanyl-D-alanine carboxypeptidase AM408_RS08215 PF01565 FAD binding domain AM408_RS08215 PF09330 D-lactate dehydrogenase, membrane binding AM408_RS08220 PF00933 Glycosyl hydrolase family 3 N terminal domain AM408_RS08220 PF14310 Fibronectin type III-like domain AM408_RS08220 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM408_RS08225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM408_RS08230 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS08235 PF00005 ABC transporter AM408_RS08240 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS08250 PF13411 MerR HTH family regulatory protein AM408_RS08255 PF06580 Histidine kinase AM408_RS08255 PF07694 5TMR of 5TMR-LYT AM408_RS08260 PF00072 Response regulator receiver domain AM408_RS08260 PF04397 LytTr DNA-binding domain AM408_RS08265 PF07308 Protein of unknown function (DUF1456) AM408_RS08270 PF06998 Protein of unknown function (DUF1307) AM408_RS08275 PF04434 SWIM zinc finger AM408_RS08280 PF05762 VWA domain containing CoxE-like protein AM408_RS08300 PF13569 Domain of unknown function (DUF4132) AM408_RS08305 PF13569 Domain of unknown function (DUF4132) AM408_RS08310 PF13569 Domain of unknown function (DUF4132) AM408_RS08315 PF09334 tRNA synthetases class I (M) AM408_RS08315 PF01588 Putative tRNA binding domain AM408_RS08320 PF10609 NUBPL iron-transfer P-loop NTPase AM408_RS08325 PF10836 Protein of unknown function (DUF2574) AM408_RS08335 PF00419 Fimbrial protein AM408_RS08340 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS08340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS08345 PF13953 PapC C-terminal domain AM408_RS08345 PF13954 PapC N-terminal domain AM408_RS08345 PF00577 Outer membrane usher protein AM408_RS08350 PF00419 Fimbrial protein AM408_RS08355 PF11776 Nickel/cobalt transporter regulator AM408_RS08360 PF03824 High-affinity nickel-transport protein AM408_RS08365 PF02583 Metal-sensitive transcriptional repressor AM408_RS08370 PF02110 Hydroxyethylthiazole kinase family AM408_RS08375 PF08543 Phosphomethylpyrimidine kinase AM408_RS08380 PF01183 Glycosyl hydrolases family 25 AM408_RS08385 PF07702 UTRA domain AM408_RS08385 PF00392 Bacterial regulatory proteins, gntR family AM408_RS08390 PF00294 pfkB family carbohydrate kinase AM408_RS08395 PF03747 ADP-ribosylglycohydrolase AM408_RS08400 PF03825 Nucleoside H+ symporter AM408_RS08405 PF01791 DeoC/LacD family aldolase AM408_RS08410 PF01116 Fructose-bisphosphate aldolase class-II AM408_RS08415 PF08013 Tagatose 6 phosphate kinase AM408_RS08420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS08425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS08430 PF03611 PTS system sugar-specific permease component AM408_RS08435 PF00107 Zinc-binding dehydrogenase AM408_RS08435 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS08440 PF08220 DeoR-like helix-turn-helix domain AM408_RS08445 PF00781 Diacylglycerol kinase catalytic domain AM408_RS08460 PF16325 Peptidase family U32 C-terminal domain AM408_RS08460 PF01136 Peptidase family U32 AM408_RS08470 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AM408_RS08475 PF07411 Domain of unknown function (DUF1508) AM408_RS08480 PF00486 Transcriptional regulatory protein, C terminal AM408_RS08480 PF00072 Response regulator receiver domain AM408_RS08485 PF00672 HAMP domain AM408_RS08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS08485 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS08490 PF07690 Major Facilitator Superfamily AM408_RS08495 PF00873 AcrB/AcrD/AcrF family AM408_RS08500 PF00873 AcrB/AcrD/AcrF family AM408_RS08505 PF13533 Biotin-lipoyl like AM408_RS08515 PF00092 von Willebrand factor type A domain AM408_RS08530 PF00012 Hsp70 protein AM408_RS08535 PF06029 AlkA N-terminal domain AM408_RS08535 PF00730 HhH-GPD superfamily base excision DNA repair protein AM408_RS08545 PF00485 Phosphoribulokinase / Uridine kinase family AM408_RS08550 PF00692 dUTPase AM408_RS08555 PF05170 AsmA family AM408_RS08560 PF03741 Integral membrane protein TerC family AM408_RS08560 PF00571 CBS domain AM408_RS08560 PF03471 Transporter associated domain AM408_RS08565 PF00483 Nucleotidyl transferase AM408_RS08570 PF01569 PAP2 superfamily AM408_RS08575 PF14052 Capsule assembly protein Wzi AM408_RS08580 PF02563 Polysaccharide biosynthesis/export protein AM408_RS08580 PF10531 SLBB domain AM408_RS08580 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM408_RS08585 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM408_RS08590 PF02706 Chain length determinant protein AM408_RS08590 PF13807 G-rich domain on putative tyrosine kinase AM408_RS08590 PF13614 AAA domain AM408_RS08595 PF02397 Bacterial sugar transferase AM408_RS08600 PF00535 Glycosyl transferase family 2 AM408_RS08615 PF00535 Glycosyl transferase family 2 AM408_RS08640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM408_RS08640 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM408_RS08645 PF16363 GDP-mannose 4,6 dehydratase AM408_RS08650 PF00483 Nucleotidyl transferase AM408_RS08655 PF04321 RmlD substrate binding domain AM408_RS08660 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM408_RS08665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM408_RS08665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM408_RS08665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM408_RS08685 PF01502 Phosphoribosyl-AMP cyclohydrolase AM408_RS08685 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM408_RS08690 PF00977 Histidine biosynthesis protein AM408_RS08695 PF00977 Histidine biosynthesis protein AM408_RS08700 PF00117 Glutamine amidotransferase class-I AM408_RS08705 PF00475 Imidazoleglycerol-phosphate dehydratase AM408_RS08710 PF00155 Aminotransferase class I and II AM408_RS08715 PF00815 Histidinol dehydrogenase AM408_RS08720 PF08029 HisG, C-terminal domain AM408_RS08720 PF01634 ATP phosphoribosyltransferase AM408_RS08735 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM408_RS08740 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AM408_RS08745 PF01370 NAD dependent epimerase/dehydratase family AM408_RS08750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS08750 PF03466 LysR substrate binding domain AM408_RS08755 PF13520 Amino acid permease AM408_RS08760 PF04143 Sulphur transport AM408_RS08765 PF01206 Sulfurtransferase TusA AM408_RS08770 PF08411 Exonuclease C-terminal AM408_RS08770 PF00929 Exonuclease AM408_RS08780 PF06445 GyrI-like small molecule binding domain AM408_RS08785 PF04632 Fusaric acid resistance protein family AM408_RS08790 PF04363 Protein of unknown function (DUF496) AM408_RS08795 PF10662 Ethanolamine utilisation - propanediol utilisation AM408_RS08810 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM408_RS08815 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM408_RS08825 PF06174 Protein of unknown function (DUF987) AM408_RS08830 PF04002 RadC-like JAB domain AM408_RS08835 PF00665 Integrase core domain AM408_RS08840 PF01695 IstB-like ATP binding protein AM408_RS08845 PF03230 Antirestriction protein AM408_RS08855 PF06067 Domain of unknown function (DUF932) AM408_RS08865 PF06006 Bacterial protein of unknown function (DUF905) AM408_RS08910 PF05321 Haemolysin expression modulating protein AM408_RS08960 PF02126 Phosphotriesterase family AM408_RS08975 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM408_RS08980 PF02654 Cobalamin-5-phosphate synthase AM408_RS08985 PF02277 Phosphoribosyltransferase AM408_RS08990 PF17969 L,D-transpeptidase C-terminal domain AM408_RS08990 PF03734 L,D-transpeptidase catalytic domain AM408_RS09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS09000 PF03466 LysR substrate binding domain AM408_RS09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS09005 PF03466 LysR substrate binding domain AM408_RS09015 PF01554 MatE AM408_RS09030 PF01709 Transcriptional regulator AM408_RS09035 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM408_RS09035 PF01048 Phosphorylase superfamily AM408_RS09040 PF00083 Sugar (and other) transporter AM408_RS09040 PF07690 Major Facilitator Superfamily AM408_RS09045 PF13737 Transposase DDE domain AM408_RS09065 PF06167 Glucose-regulated metallo-peptidase M90 AM408_RS09085 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM408_RS09090 PF01794 Ferric reductase like transmembrane component AM408_RS09095 PF00174 Oxidoreductase molybdopterin binding domain AM408_RS09100 PF00576 HIUase/Transthyretin family AM408_RS09105 PF00486 Transcriptional regulatory protein, C terminal AM408_RS09105 PF00072 Response regulator receiver domain AM408_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS09110 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS09125 PF00267 Gram-negative porin AM408_RS09135 PF01966 HD domain AM408_RS09140 PF00145 C-5 cytosine-specific DNA methylase AM408_RS09140 PF18284 DNA methylase N-terminal domain AM408_RS09145 PF03852 DNA mismatch endonuclease Vsr AM408_RS09150 PF00892 EamA-like transporter family AM408_RS09155 PF05661 Protein of unknown function (DUF808) AM408_RS09160 PF09926 Uncharacterized small protein (DUF2158) AM408_RS09180 PF10733 Protein of unknown function (DUF2525) AM408_RS09190 PF10781 Dextransucrase DSRB AM408_RS09195 PF00196 Bacterial regulatory proteins, luxR family AM408_RS09200 PF01311 Bacterial export proteins, family 1 AM408_RS09205 PF01313 Bacterial export proteins, family 3 AM408_RS09210 PF00813 FliP family AM408_RS09215 PF04347 Flagellar biosynthesis protein, FliO AM408_RS09220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM408_RS09220 PF16973 Flagellar motor switch protein FliN N-terminal AM408_RS09225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM408_RS09225 PF02154 Flagellar motor switch protein FliM AM408_RS09230 PF03748 Flagellar basal body-associated protein FliL AM408_RS09235 PF02120 Flagellar hook-length control protein FliK AM408_RS09240 PF02050 Flagellar FliJ protein AM408_RS09245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM408_RS09245 PF18269 T3SS EscN ATPase C-terminal domain AM408_RS09250 PF02108 Flagellar assembly protein FliH AM408_RS09255 PF01706 FliG C-terminal domain AM408_RS09255 PF14841 FliG middle domain AM408_RS09255 PF14842 FliG N-terminal domain AM408_RS09260 PF01514 Secretory protein of YscJ/FliF family AM408_RS09260 PF08345 Flagellar M-ring protein C-terminal AM408_RS09265 PF02049 Flagellar hook-basal body complex protein FliE AM408_RS09275 PF02586 SOS response associated peptidase (SRAP) AM408_RS09280 PF01206 Sulfurtransferase TusA AM408_RS09285 PF04143 Sulphur transport AM408_RS09295 PF13987 YedD-like protein AM408_RS09300 PF00128 Alpha amylase, catalytic domain AM408_RS09300 PF02806 Alpha amylase, C-terminal all-beta domain AM408_RS09305 PF05400 Flagellar protein FliT AM408_RS09310 PF02561 Flagellar protein FliS AM408_RS09315 PF02465 Flagellar hook-associated protein 2 N-terminus AM408_RS09315 PF07195 Flagellar hook-associated protein 2 C-terminus AM408_RS09320 PF00700 Bacterial flagellin C-terminal helical region AM408_RS09320 PF12445 Flagellin protein AM408_RS09320 PF00669 Bacterial flagellin N-terminal helical region AM408_RS09325 PF04545 Sigma-70, region 4 AM408_RS09325 PF04542 Sigma-70 region 2 AM408_RS09325 PF04539 Sigma-70 region 3 AM408_RS09330 PF02899 Phage integrase, N-terminal SAM-like domain AM408_RS09335 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS09340 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS09345 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS09350 PF00005 ABC transporter AM408_RS09355 PF00196 Bacterial regulatory proteins, luxR family AM408_RS09355 PF03472 Autoinducer binding domain AM408_RS09360 PF10769 Protein of unknown function (DUF2594) AM408_RS09365 PF00196 Bacterial regulatory proteins, luxR family AM408_RS09365 PF00072 Response regulator receiver domain AM408_RS09370 PF02151 UvrB/uvrC motif AM408_RS09370 PF08459 UvrC Helix-hairpin-helix N-terminal AM408_RS09370 PF01541 GIY-YIG catalytic domain AM408_RS09375 PF01066 CDP-alcohol phosphatidyltransferase AM408_RS09395 PF03695 Uncharacterised protein family (UPF0149) AM408_RS09395 PF02810 SEC-C motif AM408_RS09400 PF03222 Tryptophan/tyrosine permease family AM408_RS09405 PF10678 Protein of unknown function (DUF2492) AM408_RS09410 PF00210 Ferritin-like domain AM408_RS09420 PF13992 YecR-like lipoprotein AM408_RS09430 PF10964 Protein of unknown function (DUF2766) AM408_RS09435 PF00210 Ferritin-like domain AM408_RS09445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM408_RS09450 PF00005 ABC transporter AM408_RS09455 PF02653 Branched-chain amino acid transport system / permease component AM408_RS09460 PF02358 Trehalose-phosphatase AM408_RS09465 PF00982 Glycosyltransferase family 20 AM408_RS09470 PF00582 Universal stress protein family AM408_RS09475 PF05247 Flagellar transcriptional activator (FlhD) AM408_RS09480 PF05280 Flagellar transcriptional activator (FlhC) AM408_RS09485 PF01618 MotA/TolQ/ExbB proton channel family AM408_RS09490 PF00691 OmpA family AM408_RS09490 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM408_RS09495 PF09078 CheY binding AM408_RS09495 PF01584 CheW-like domain AM408_RS09495 PF01627 Hpt domain AM408_RS09495 PF02895 Signal transducing histidine kinase, homodimeric domain AM408_RS09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS09500 PF01584 CheW-like domain AM408_RS09505 PF00672 HAMP domain AM408_RS09505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM408_RS09505 PF02203 Tar ligand binding domain homologue AM408_RS09510 PF00672 HAMP domain AM408_RS09510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM408_RS09510 PF02203 Tar ligand binding domain homologue AM408_RS09515 PF01739 CheR methyltransferase, SAM binding domain AM408_RS09515 PF03705 CheR methyltransferase, all-alpha domain AM408_RS09520 PF01339 CheB methylesterase AM408_RS09520 PF00072 Response regulator receiver domain AM408_RS09525 PF00072 Response regulator receiver domain AM408_RS09530 PF04344 Chemotaxis phosphatase, CheZ AM408_RS09535 PF01312 FlhB HrpN YscU SpaS Family AM408_RS09540 PF00771 FHIPEP family AM408_RS09545 PF06366 Flagellar protein FlhE AM408_RS09550 PF07007 Lysozyme inhibitor LprI AM408_RS09555 PF03485 Arginyl tRNA synthetase N terminal domain AM408_RS09555 PF00750 tRNA synthetases class I (R) AM408_RS09555 PF05746 DALR anticodon binding domain AM408_RS09565 PF06185 YecM protein AM408_RS09570 PF03932 CutC family AM408_RS09575 PF03264 NapC/NirT cytochrome c family, N-terminal region AM408_RS09580 PF18364 Molybdopterin oxidoreductase N-terminal domain AM408_RS09580 PF00384 Molybdopterin oxidoreductase AM408_RS09580 PF01568 Molydopterin dinucleotide binding domain AM408_RS09585 PF08003 Protein of unknown function (DUF1698) AM408_RS09590 PF13649 Methyltransferase domain AM408_RS09595 PF01124 MAPEG family AM408_RS09600 PF01904 Protein of unknown function DUF72 AM408_RS09605 PF00857 Isochorismatase family AM408_RS09610 PF01336 OB-fold nucleic acid binding domain AM408_RS09610 PF00152 tRNA synthetases class II (D, K and N) AM408_RS09610 PF02938 GAD domain AM408_RS09615 PF00293 NUDIX domain AM408_RS09620 PF01709 Transcriptional regulator AM408_RS09625 PF02075 Crossover junction endodeoxyribonuclease RuvC AM408_RS09630 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM408_RS09640 PF01330 RuvA N terminal domain AM408_RS09640 PF07499 RuvA, C-terminal domain AM408_RS09645 PF05491 RuvB C-terminal winged helix domain AM408_RS09645 PF17864 RuvB AAA lid domain AM408_RS09645 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM408_RS09650 PF00950 ABC 3 transport family AM408_RS09655 PF00005 ABC transporter AM408_RS09660 PF01297 Zinc-uptake complex component A periplasmic AM408_RS09665 PF01551 Peptidase family M23 AM408_RS09665 PF01476 LysM domain AM408_RS09665 PF08525 Opacity-associated protein A N-terminal motif AM408_RS09670 PF03279 Bacterial lipid A biosynthesis acyltransferase AM408_RS09675 PF00224 Pyruvate kinase, barrel domain AM408_RS09675 PF02887 Pyruvate kinase, alpha/beta domain AM408_RS09680 PF01380 SIS domain AM408_RS09680 PF01418 Helix-turn-helix domain, rpiR family AM408_RS09685 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM408_RS09685 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM408_RS09690 PF00920 Dehydratase family AM408_RS09695 PF01081 KDPG and KHG aldolase AM408_RS09700 PF02222 ATP-grasp domain AM408_RS09705 PF07130 YebG protein AM408_RS09710 PF13995 YebF-like protein AM408_RS09715 PF04391 Protein of unknown function (DUF533) AM408_RS09725 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM408_RS09725 PF00326 Prolyl oligopeptidase family AM408_RS09730 PF00929 Exonuclease AM408_RS09735 PF00795 Carbon-nitrogen hydrolase AM408_RS09740 PF06440 DNA polymerase III, theta subunit AM408_RS09745 PF04234 CopC domain AM408_RS09750 PF05425 Copper resistance protein D AM408_RS09755 PF10709 Protein of unknown function (DUF2511) AM408_RS09760 PF00149 Calcineurin-like phosphoesterase AM408_RS09765 PF07358 Protein of unknown function (DUF1482) AM408_RS09770 PF07351 Protein of unknown function (DUF1480) AM408_RS09775 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM408_RS09775 PF01189 16S rRNA methyltransferase RsmB/F AM408_RS09775 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM408_RS09780 PF02470 MlaD protein AM408_RS09785 PF04403 Paraquat-inducible protein A AM408_RS09790 PF13185 GAF domain AM408_RS09795 PF04352 ProQ/FINO family AM408_RS09795 PF17516 ProQ C-terminal domain AM408_RS09800 PF00595 PDZ domain AM408_RS09800 PF03572 Peptidase family S41 AM408_RS09800 PF11818 C-terminal domain of tail specific protease (DUF3340) AM408_RS09800 PF17804 Tail specific protease N-terminal domain AM408_RS09805 PF01435 Peptidase family M48 AM408_RS09810 PF07690 Major Facilitator Superfamily AM408_RS09815 PF01614 Bacterial transcriptional regulator AM408_RS09815 PF09339 IclR helix-turn-helix domain AM408_RS09820 PF13996 YobH-like protein AM408_RS09825 PF13998 MgrB protein AM408_RS09830 PF13974 YebO-like protein AM408_RS09840 PF10736 Protein of unknown function (DUF2627) AM408_RS09845 PF00313 'Cold-shock' DNA-binding domain AM408_RS09850 PF13847 Methyltransferase domain AM408_RS09855 PF02659 Putative manganese efflux pump AM408_RS09865 PF06173 Protein of unknown function (DUF986) AM408_RS09870 PF03613 PTS system mannose/fructose/sorbose family IID component AM408_RS09875 PF03609 PTS system sorbose-specific iic component AM408_RS09880 PF03610 PTS system fructose IIA component AM408_RS09880 PF03830 PTS system sorbose subfamily IIB component AM408_RS09895 PF03741 Integral membrane protein TerC family AM408_RS09895 PF03471 Transporter associated domain AM408_RS09900 PF00563 EAL domain AM408_RS09900 PF12792 CSS motif domain associated with EAL AM408_RS09905 PF03315 Serine dehydratase beta chain AM408_RS09905 PF03313 Serine dehydratase alpha chain AM408_RS09910 PF00293 NUDIX domain AM408_RS09915 PF04715 Anthranilate synthase component I, N terminal region AM408_RS09915 PF00425 chorismate binding enzyme AM408_RS09920 PF03701 Uncharacterised protein family (UPF0181) AM408_RS09925 PF08986 Domain of unknown function (DUF1889) AM408_RS09930 PF01042 Endoribonuclease L-PSP AM408_RS09935 PF13307 Helicase C-terminal domain AM408_RS09935 PF04851 Type III restriction enzyme, res subunit AM408_RS09940 PF00814 Glycoprotease family AM408_RS09945 PF03843 Outer membrane lipoprotein Slp family AM408_RS09950 PF00501 AMP-binding enzyme AM408_RS09950 PF13193 AMP-binding enzyme C-terminal domain AM408_RS09955 PF00570 HRDC domain AM408_RS09955 PF01612 3'-5' exonuclease AM408_RS09960 PF00970 Oxidoreductase FAD-binding domain AM408_RS09960 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS09960 PF00175 Oxidoreductase NAD-binding domain AM408_RS09965 PF00355 Rieske [2Fe-2S] domain AM408_RS09965 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM408_RS09970 PF02028 BCCT, betaine/carnitine/choline family transporter AM408_RS09975 PF00180 Isocitrate/isopropylmalate dehydrogenase AM408_RS09980 PF03466 LysR substrate binding domain AM408_RS09980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS09985 PF01810 LysE type translocator AM408_RS09990 PF09313 Domain of unknown function (DUF1971) AM408_RS09995 PF08956 Domain of unknown function (DUF1869) AM408_RS10000 PF04226 Transglycosylase associated protein AM408_RS10015 PF13185 GAF domain AM408_RS10015 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS10020 PF03891 Domain of unknown function (DUF333) AM408_RS10025 PF04343 Protein of unknown function, DUF488 AM408_RS10030 PF07690 Major Facilitator Superfamily AM408_RS10035 PF02311 AraC-like ligand binding domain AM408_RS10035 PF12833 Helix-turn-helix domain AM408_RS10040 PF04284 Protein of unknown function (DUF441) AM408_RS10050 PF04073 Aminoacyl-tRNA editing domain AM408_RS10055 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS10055 PF17155 Gammaproteobacterial periplasmic sensor domain AM408_RS10060 PF17158 Membrane-associated sensor, integral membrane domain AM408_RS10060 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS10065 PF04285 Protein of unknown function (DUF444) AM408_RS10070 PF06798 PrkA serine protein kinase C-terminal domain AM408_RS10070 PF08298 PrkA AAA domain AM408_RS10075 PF06629 MltA-interacting protein MipA AM408_RS10080 PF00248 Aldo/keto reductase family AM408_RS10085 PF01263 Aldose 1-epimerase AM408_RS10090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM408_RS10090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM408_RS10095 PF01641 SelR domain AM408_RS10100 PF07023 Protein of unknown function (DUF1315) AM408_RS10105 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS10105 PF00107 Zinc-binding dehydrogenase AM408_RS10110 PF00083 Sugar (and other) transporter AM408_RS10115 PF00107 Zinc-binding dehydrogenase AM408_RS10115 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS10120 PF01116 Fructose-bisphosphate aldolase class-II AM408_RS10125 PF00294 pfkB family carbohydrate kinase AM408_RS10130 PF00248 Aldo/keto reductase family AM408_RS10135 PF08220 DeoR-like helix-turn-helix domain AM408_RS10135 PF00455 DeoR C terminal sensor domain AM408_RS10140 PF00083 Sugar (and other) transporter AM408_RS10145 PF13737 Transposase DDE domain AM408_RS10150 PF00083 Sugar (and other) transporter AM408_RS10155 PF00857 Isochorismatase family AM408_RS10160 PF17763 Glutaminase/Asparaginase C-terminal domain AM408_RS10160 PF00710 Asparaginase, N-terminal AM408_RS10165 PF01343 Peptidase family S49 AM408_RS10175 PF00881 Nitroreductase family AM408_RS10185 PF00586 AIR synthase related protein, N-terminal domain AM408_RS10185 PF02769 AIR synthase related protein, C-terminal domain AM408_RS10190 PF01131 DNA topoisomerase AM408_RS10190 PF01751 Toprim domain AM408_RS10195 PF06889 Protein of unknown function (DUF1266) AM408_RS10200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM408_RS10200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM408_RS10205 PF07383 Protein of unknown function (DUF1496) AM408_RS10210 PF00293 NUDIX domain AM408_RS10215 PF01066 CDP-alcohol phosphatidyltransferase AM408_RS10220 PF00581 Rhodanese-like domain AM408_RS10225 PF00005 ABC transporter AM408_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS10235 PF13416 Bacterial extracellular solute-binding protein AM408_RS10240 PF02627 Carboxymuconolactone decarboxylase family AM408_RS10245 PF09335 SNARE associated Golgi protein AM408_RS10255 PF09335 SNARE associated Golgi protein AM408_RS10260 PF03372 Endonuclease/Exonuclease/phosphatase family AM408_RS10270 PF00202 Aminotransferase class-III AM408_RS10275 PF04958 Arginine N-succinyltransferase beta subunit AM408_RS10280 PF00171 Aldehyde dehydrogenase family AM408_RS10285 PF04996 Succinylarginine dihydrolase AM408_RS10290 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM408_RS10295 PF07813 LTXXQ motif family protein AM408_RS10300 PF05962 HutD AM408_RS10310 PF02540 NAD synthase AM408_RS10315 PF04355 SmpA / OmlA family AM408_RS10325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS10330 PF02378 Phosphotransferase system, EIIC AM408_RS10335 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM408_RS10340 PF12833 Helix-turn-helix domain AM408_RS10340 PF07883 Cupin domain AM408_RS10345 PF02056 Family 4 glycosyl hydrolase AM408_RS10345 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM408_RS10350 PF04794 YdjC-like protein AM408_RS10355 PF06628 Catalase-related immune-responsive AM408_RS10355 PF18011 C-terminal domain found in long catalases AM408_RS10355 PF00199 Catalase AM408_RS10360 PF10729 Cell division activator CedA AM408_RS10370 PF00375 Sodium:dicarboxylate symporter family AM408_RS10375 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM408_RS10380 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS10385 PF14002 YniB-like protein AM408_RS10390 PF03881 Fructosamine kinase AM408_RS10395 PF11080 Endoribonuclease GhoS AM408_RS10400 PF00294 pfkB family carbohydrate kinase AM408_RS10405 PF04338 Protein of unknown function, DUF481 AM408_RS10415 PF07906 ShET2 enterotoxin, N-terminal region AM408_RS10425 PF03129 Anticodon binding domain AM408_RS10425 PF02824 TGS domain AM408_RS10425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM408_RS10425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM408_RS10430 PF05198 Translation initiation factor IF-3, N-terminal domain AM408_RS10430 PF00707 Translation initiation factor IF-3, C-terminal domain AM408_RS10435 PF01632 Ribosomal protein L35 AM408_RS10440 PF00453 Ribosomal protein L20 AM408_RS10445 PF01409 tRNA synthetases class II core domain (F) AM408_RS10445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM408_RS10450 PF03147 Ferredoxin-fold anticodon binding domain AM408_RS10450 PF01588 Putative tRNA binding domain AM408_RS10450 PF03484 tRNA synthetase B5 domain AM408_RS10450 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM408_RS10450 PF03483 B3/4 domain AM408_RS10455 PF00216 Bacterial DNA-binding protein AM408_RS10460 PF01032 FecCD transport family AM408_RS10465 PF00255 Glutathione peroxidase AM408_RS10470 PF00005 ABC transporter AM408_RS10475 PF00877 NlpC/P60 family AM408_RS10480 PF00563 EAL domain AM408_RS10485 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM408_RS10490 PF10636 Hemin uptake protein hemP AM408_RS10495 PF00793 DAHP synthetase I family AM408_RS10500 PF03618 Kinase/pyrophosphorylase AM408_RS10510 PF00391 PEP-utilising enzyme, mobile domain AM408_RS10510 PF02896 PEP-utilising enzyme, TIM barrel domain AM408_RS10510 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM408_RS10515 PF13193 AMP-binding enzyme C-terminal domain AM408_RS10515 PF00501 AMP-binding enzyme AM408_RS10525 PF01494 FAD binding domain AM408_RS10530 PF01012 Electron transfer flavoprotein domain AM408_RS10530 PF00766 Electron transfer flavoprotein FAD-binding domain AM408_RS10535 PF01012 Electron transfer flavoprotein domain AM408_RS10545 PF02311 AraC-like ligand binding domain AM408_RS10545 PF12833 Helix-turn-helix domain AM408_RS10550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM408_RS10550 PF02770 Acyl-CoA dehydrogenase, middle domain AM408_RS10550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM408_RS10555 PF01144 Coenzyme A transferase AM408_RS10560 PF01487 Type I 3-dehydroquinase AM408_RS10565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM408_RS10565 PF08501 Shikimate dehydrogenase substrate binding domain AM408_RS10570 PF07690 Major Facilitator Superfamily AM408_RS10575 PF07690 Major Facilitator Superfamily AM408_RS10580 PF08965 Domain of unknown function (DUF1870) AM408_RS10590 PF01594 AI-2E family transporter AM408_RS10600 PF13183 4Fe-4S dicluster domain AM408_RS10600 PF01565 FAD binding domain AM408_RS10600 PF02913 FAD linked oxidases, C-terminal domain AM408_RS10605 PF03061 Thioesterase superfamily AM408_RS10610 PF15930 Domain of unknown function AM408_RS10615 PF01521 Iron-sulphur cluster biosynthesis AM408_RS10620 PF01458 Uncharacterized protein family (UPF0051) AM408_RS10625 PF00005 ABC transporter AM408_RS10630 PF01458 Uncharacterized protein family (UPF0051) AM408_RS10635 PF00266 Aminotransferase class-V AM408_RS10640 PF02657 Fe-S metabolism associated domain AM408_RS10645 PF03734 L,D-transpeptidase catalytic domain AM408_RS10645 PF01476 LysM domain AM408_RS10645 PF17969 L,D-transpeptidase C-terminal domain AM408_RS10650 PF04728 Lipoprotein leucine-zipper AM408_RS10655 PF02887 Pyruvate kinase, alpha/beta domain AM408_RS10655 PF00224 Pyruvate kinase, barrel domain AM408_RS10660 PF10965 Protein of unknown function (DUF2767) AM408_RS10665 PF12800 4Fe-4S binding domain AM408_RS10665 PF13247 4Fe-4S dicluster domain AM408_RS10670 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AM408_RS10670 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AM408_RS10680 PF13247 4Fe-4S dicluster domain AM408_RS10685 PF01292 Prokaryotic cytochrome b561 AM408_RS10695 PF13454 FAD-NAD(P)-binding AM408_RS10700 PF08803 Putative mono-oxygenase ydhR AM408_RS10715 PF16168 Adhesin of bacterial autotransporter system, probable stalk AM408_RS10715 PF03212 Pertactin AM408_RS10720 PF01554 MatE AM408_RS10725 PF00677 Lumazine binding domain AM408_RS10735 PF07690 Major Facilitator Superfamily AM408_RS10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS10740 PF03466 LysR substrate binding domain AM408_RS10745 PF00356 Bacterial regulatory proteins, lacI family AM408_RS10760 PF07690 Major Facilitator Superfamily AM408_RS10765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM408_RS10765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM408_RS10770 PF00877 NlpC/P60 family AM408_RS10775 PF00462 Glutaredoxin AM408_RS10780 PF00270 DEAD/DEAH box helicase AM408_RS10780 PF08494 DEAD/H associated AM408_RS10780 PF00271 Helicase conserved C-terminal domain AM408_RS10785 PF00929 Exonuclease AM408_RS10790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM408_RS10795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM408_RS10800 PF00440 Bacterial regulatory proteins, tetR family AM408_RS10800 PF16925 Tetracyclin repressor-like, C-terminal domain AM408_RS10805 PF06945 Protein of unknown function (DUF1289) AM408_RS10810 PF00248 Aldo/keto reductase family AM408_RS10815 PF00080 Copper/zinc superoxide dismutase (SODC) AM408_RS10820 PF04632 Fusaric acid resistance protein family AM408_RS10825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS10825 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS10830 PF07869 Protein of unknown function (DUF1656) AM408_RS10835 PF01047 MarR family AM408_RS10840 PF05433 Glycine zipper 2TM domain AM408_RS10845 PF03702 Anhydro-N-acetylmuramic acid kinase AM408_RS10850 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM408_RS10855 PF01243 Pyridoxamine 5'-phosphate oxidase AM408_RS10855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM408_RS10860 PF01479 S4 domain AM408_RS10860 PF00579 tRNA synthetases class I (W and Y) AM408_RS10865 PF08543 Phosphomethylpyrimidine kinase AM408_RS10870 PF02798 Glutathione S-transferase, N-terminal domain AM408_RS10870 PF00043 Glutathione S-transferase, C-terminal domain AM408_RS10875 PF00854 POT family AM408_RS10885 PF00730 HhH-GPD superfamily base excision DNA repair protein AM408_RS10885 PF00633 Helix-hairpin-helix motif AM408_RS10885 PF10576 Iron-sulfur binding domain of endonuclease III AM408_RS10890 PF02508 Rnf-Nqr subunit, membrane protein AM408_RS10895 PF04205 FMN-binding domain AM408_RS10900 PF03116 NQR2, RnfD, RnfE family AM408_RS10905 PF13375 RnfC Barrel sandwich hybrid domain AM408_RS10905 PF12838 4Fe-4S dicluster domain AM408_RS10905 PF10531 SLBB domain AM408_RS10905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM408_RS10910 PF04060 Putative Fe-S cluster AM408_RS10915 PF02508 Rnf-Nqr subunit, membrane protein AM408_RS10920 PF10754 Protein of unknown function (DUF2569) AM408_RS10925 PF05321 Haemolysin expression modulating protein AM408_RS10940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM408_RS10940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM408_RS10945 PF00962 Adenosine/AMP deaminase AM408_RS10950 PF00155 Aminotransferase class I and II AM408_RS10955 PF02378 Phosphotransferase system, EIIC AM408_RS10955 PF00367 phosphotransferase system, EIIB AM408_RS10960 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM408_RS10960 PF00356 Bacterial regulatory proteins, lacI family AM408_RS10970 PF00440 Bacterial regulatory proteins, tetR family AM408_RS10975 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM408_RS10975 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM408_RS10975 PF00703 Glycosyl hydrolases family 2 AM408_RS10985 PF03573 outer membrane porin, OprD family AM408_RS10990 PF06097 Bacterial protein of unknown function (DUF945) AM408_RS10995 PF01238 Phosphomannose isomerase type I AM408_RS11000 PF05683 Fumarase C-terminus AM408_RS11000 PF05681 Fumarate hydratase (Fumerase) AM408_RS11005 PF00206 Lyase AM408_RS11005 PF10415 Fumarase C C-terminus AM408_RS11010 PF05472 DNA replication terminus site-binding protein (Ter protein) AM408_RS11015 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS11015 PF00672 HAMP domain AM408_RS11020 PF00486 Transcriptional regulatory protein, C terminal AM408_RS11020 PF00072 Response regulator receiver domain AM408_RS11025 PF06942 GlpM protein AM408_RS11035 PF13520 Amino acid permease AM408_RS11045 PF07338 Protein of unknown function (DUF1471) AM408_RS11050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM408_RS11050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM408_RS11050 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM408_RS11055 PF02233 NAD(P) transhydrogenase beta subunit AM408_RS11060 PF01594 AI-2E family transporter AM408_RS11070 PF00893 Small Multidrug Resistance protein AM408_RS11075 PF00893 Small Multidrug Resistance protein AM408_RS11080 PF00089 Trypsin AM408_RS11100 PF07690 Major Facilitator Superfamily AM408_RS11105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS11105 PF03466 LysR substrate binding domain AM408_RS11110 PF00480 ROK family AM408_RS11120 PF00654 Voltage gated chloride channel AM408_RS11125 PF02613 Nitrate reductase delta subunit AM408_RS11130 PF04976 DMSO reductase anchor subunit (DmsC) AM408_RS11135 PF13247 4Fe-4S dicluster domain AM408_RS11135 PF12800 4Fe-4S binding domain AM408_RS11140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM408_RS11140 PF00384 Molybdopterin oxidoreductase AM408_RS11140 PF01568 Molydopterin dinucleotide binding domain AM408_RS11145 PF00384 Molybdopterin oxidoreductase AM408_RS11145 PF01568 Molydopterin dinucleotide binding domain AM408_RS11145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM408_RS11150 PF06649 Protein of unknown function (DUF1161) AM408_RS11155 PF06788 Uncharacterised protein family (UPF0257) AM408_RS11160 PF13302 Acetyltransferase (GNAT) domain AM408_RS11165 PF06932 Protein of unknown function (DUF1283) AM408_RS11170 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM408_RS11180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM408_RS11180 PF13378 Enolase C-terminal domain-like AM408_RS11185 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS11185 PF00107 Zinc-binding dehydrogenase AM408_RS11190 PF07690 Major Facilitator Superfamily AM408_RS11190 PF00083 Sugar (and other) transporter AM408_RS11195 PF01232 Mannitol dehydrogenase Rossmann domain AM408_RS11195 PF08125 Mannitol dehydrogenase C-terminal domain AM408_RS11200 PF14001 YdfZ protein AM408_RS11205 PF00392 Bacterial regulatory proteins, gntR family AM408_RS11205 PF07729 FCD domain AM408_RS11210 PF00106 short chain dehydrogenase AM408_RS11220 PF01432 Peptidase family M3 AM408_RS11225 PF02464 Competence-damaged protein AM408_RS11230 PF04076 Bacterial OB fold (BOF) protein AM408_RS11235 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS11245 PF07690 Major Facilitator Superfamily AM408_RS11250 PF00892 EamA-like transporter family AM408_RS11255 PF13999 MarB protein AM408_RS11260 PF12833 Helix-turn-helix domain AM408_RS11265 PF01047 MarR family AM408_RS11270 PF01914 MarC family integral membrane protein AM408_RS11275 PF07690 Major Facilitator Superfamily AM408_RS11285 PF03466 LysR substrate binding domain AM408_RS11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS11290 PF00171 Aldehyde dehydrogenase family AM408_RS11295 PF04960 Glutaminase AM408_RS11300 PF13811 Domain of unknown function (DUF4186) AM408_RS11305 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS11315 PF01232 Mannitol dehydrogenase Rossmann domain AM408_RS11315 PF08125 Mannitol dehydrogenase C-terminal domain AM408_RS11325 PF01062 Bestrophin, RFP-TM, chloride channel AM408_RS11330 PF13649 Methyltransferase domain AM408_RS11335 PF03992 Antibiotic biosynthesis monooxygenase AM408_RS11340 PF01791 DeoC/LacD family aldolase AM408_RS11345 PF13407 Periplasmic binding protein domain AM408_RS11350 PF02653 Branched-chain amino acid transport system / permease component AM408_RS11355 PF02653 Branched-chain amino acid transport system / permease component AM408_RS11360 PF00005 ABC transporter AM408_RS11365 PF04198 Putative sugar-binding domain AM408_RS11370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS11370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS11375 PF13018 Extended Signal Peptide of Type V secretion system AM408_RS11380 PF01381 Helix-turn-helix AM408_RS11385 PF13657 HipA N-terminal domain AM408_RS11385 PF07804 HipA-like C-terminal domain AM408_RS11400 PF00577 Outer membrane usher protein AM408_RS11400 PF13953 PapC C-terminal domain AM408_RS11405 PF00419 Fimbrial protein AM408_RS11410 PF00419 Fimbrial protein AM408_RS11415 PF09160 FimH, mannose binding AM408_RS11420 PF00384 Molybdopterin oxidoreductase AM408_RS11425 PF17073 Two-component-system connector protein AM408_RS11430 PF12833 Helix-turn-helix domain AM408_RS11435 PF00884 Sulfatase AM408_RS11440 PF04055 Radical SAM superfamily AM408_RS11440 PF13186 Iron-sulfur cluster-binding domain AM408_RS11445 PF00005 ABC transporter AM408_RS11445 PF06472 ABC transporter transmembrane region 2 AM408_RS11450 PF07715 TonB-dependent Receptor Plug Domain AM408_RS11455 PF00675 Insulinase (Peptidase family M16) AM408_RS11455 PF05193 Peptidase M16 inactive domain AM408_RS11460 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM408_RS11465 PF13520 Amino acid permease AM408_RS11470 PF02638 Glycosyl hydrolase-like 10 AM408_RS11475 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS11480 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS11480 PF13426 PAS domain AM408_RS11480 PF00563 EAL domain AM408_RS11485 PF01427 D-ala-D-ala dipeptidase AM408_RS11490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS11495 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS11500 PF12911 N-terminal TM domain of oligopeptide transport permease C AM408_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS11505 PF00005 ABC transporter AM408_RS11505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS11510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS11510 PF00005 ABC transporter AM408_RS11515 PF02566 OsmC-like protein AM408_RS11525 PF10684 Putative biofilm-dependent modulation protein AM408_RS11530 PF08136 30S ribosomal protein subunit S22 family AM408_RS11535 PF03949 Malic enzyme, NAD binding domain AM408_RS11535 PF00390 Malic enzyme, N-terminal domain AM408_RS11540 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS11540 PF00107 Zinc-binding dehydrogenase AM408_RS11545 PF01381 Helix-turn-helix AM408_RS11550 PF01292 Prokaryotic cytochrome b561 AM408_RS11555 PF09163 Formate dehydrogenase N, transmembrane AM408_RS11555 PF12800 4Fe-4S binding domain AM408_RS11555 PF13247 4Fe-4S dicluster domain AM408_RS11565 PF00892 EamA-like transporter family AM408_RS11570 PF00267 Gram-negative porin AM408_RS11585 PF07690 Major Facilitator Superfamily AM408_RS11590 PF00384 Molybdopterin oxidoreductase AM408_RS11590 PF14710 Respiratory nitrate reductase alpha N-terminal AM408_RS11590 PF01568 Molydopterin dinucleotide binding domain AM408_RS11595 PF14710 Respiratory nitrate reductase alpha N-terminal AM408_RS11595 PF01568 Molydopterin dinucleotide binding domain AM408_RS11595 PF00384 Molybdopterin oxidoreductase AM408_RS11600 PF13247 4Fe-4S dicluster domain AM408_RS11600 PF14711 Respiratory nitrate reductase beta C-terminal AM408_RS11605 PF02613 Nitrate reductase delta subunit AM408_RS11610 PF02665 Nitrate reductase gamma subunit AM408_RS11615 PF02567 Phenazine biosynthesis-like protein AM408_RS11620 PF00797 N-acetyltransferase AM408_RS11625 PF01613 Flavin reductase like domain AM408_RS11630 PF01361 Tautomerase enzyme AM408_RS11635 PF01609 Transposase DDE domain AM408_RS11635 PF13808 DDE_Tnp_1-associated AM408_RS11655 PF05593 RHS Repeat AM408_RS11655 PF14220 Domain of unknown function (DUF4329) AM408_RS11655 PF03527 RHS protein AM408_RS11660 PF04717 Type VI secretion system, phage-baseplate injector AM408_RS11665 PF17520 Family of unknown function (DUF5445) AM408_RS11670 PF13417 Glutathione S-transferase, N-terminal domain AM408_RS11675 PF00324 Amino acid permease AM408_RS11695 PF07715 TonB-dependent Receptor Plug Domain AM408_RS11695 PF00593 TonB dependent receptor AM408_RS11700 PF00392 Bacterial regulatory proteins, gntR family AM408_RS11700 PF07729 FCD domain AM408_RS11705 PF16884 N-terminal domain of oxidoreductase AM408_RS11705 PF00107 Zinc-binding dehydrogenase AM408_RS11715 PF00583 Acetyltransferase (GNAT) family AM408_RS11720 PF04657 Putative inner membrane exporter, YdcZ AM408_RS11725 PF10735 Protein of unknown function (DUF2526) AM408_RS11730 PF10753 Toxin GhoT_OrtT AM408_RS11745 PF00171 Aldehyde dehydrogenase family AM408_RS11750 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS11755 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS11760 PF08402 TOBE domain AM408_RS11760 PF00005 ABC transporter AM408_RS11765 PF13416 Bacterial extracellular solute-binding protein AM408_RS11770 PF00155 Aminotransferase class I and II AM408_RS11770 PF00392 Bacterial regulatory proteins, gntR family AM408_RS11775 PF01381 Helix-turn-helix AM408_RS11775 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AM408_RS11780 PF07927 HicA toxin of bacterial toxin-antitoxin, AM408_RS11785 PF10829 Protein of unknown function (DUF2554) AM408_RS11790 PF12392 Collagenase AM408_RS11790 PF01136 Peptidase family U32 AM408_RS11795 PF01381 Helix-turn-helix AM408_RS11795 PF07883 Cupin domain AM408_RS11800 PF03594 Benzoate membrane transport protein AM408_RS11805 PF07282 Putative transposase DNA-binding domain AM408_RS11805 PF01385 Probable transposase AM408_RS11805 PF12323 Helix-turn-helix domain AM408_RS11815 PF11769 Protein of unknown function (DUF3313) AM408_RS11820 PF03848 Tellurite resistance protein TehB AM408_RS11825 PF03595 Voltage-dependent anion channel AM408_RS11830 PF18836 Beta solenoid repeat from YDCK AM408_RS11835 PF13302 Acetyltransferase (GNAT) domain AM408_RS11840 PF04325 Protein of unknown function (DUF465) AM408_RS11850 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM408_RS11860 PF07063 Domain of unknown function (DUF1338) AM408_RS11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS11865 PF03466 LysR substrate binding domain AM408_RS11870 PF02203 Tar ligand binding domain homologue AM408_RS11870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM408_RS11870 PF00672 HAMP domain AM408_RS11875 PF01848 Hok/gef family AM408_RS11885 PF01292 Prokaryotic cytochrome b561 AM408_RS11890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM408_RS11890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM408_RS11895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM408_RS11895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM408_RS11905 PF00171 Aldehyde dehydrogenase family AM408_RS11910 PF02698 DUF218 domain AM408_RS11915 PF04408 Helicase associated domain (HA2) AM408_RS11915 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM408_RS11915 PF11898 Domain of unknown function (DUF3418) AM408_RS11915 PF00270 DEAD/DEAH box helicase AM408_RS11915 PF00271 Helicase conserved C-terminal domain AM408_RS11920 PF02525 Flavodoxin-like fold AM408_RS11925 PF00782 Dual specificity phosphatase, catalytic domain AM408_RS11930 PF12146 Serine aminopeptidase, S33 AM408_RS11930 PF12147 Putative methyltransferase AM408_RS11940 PF01066 CDP-alcohol phosphatidyltransferase AM408_RS11945 PF10971 Protein of unknown function (DUF2773) AM408_RS11950 PF00248 Aldo/keto reductase family AM408_RS11980 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS11985 PF07848 PaaX-like protein AM408_RS11985 PF08223 PaaX-like protein C-terminal domain AM408_RS11990 PF14535 AMP-binding enzyme C-terminal domain AM408_RS11990 PF00501 AMP-binding enzyme AM408_RS11995 PF02803 Thiolase, C-terminal domain AM408_RS11995 PF00108 Thiolase, N-terminal domain AM408_RS12000 PF03061 Thioesterase superfamily AM408_RS12005 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM408_RS12005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM408_RS12005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM408_RS12010 PF00378 Enoyl-CoA hydratase/isomerase AM408_RS12015 PF00378 Enoyl-CoA hydratase/isomerase AM408_RS12020 PF00970 Oxidoreductase FAD-binding domain AM408_RS12020 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS12020 PF00175 Oxidoreductase NAD-binding domain AM408_RS12025 PF01883 Iron-sulfur cluster assembly protein AM408_RS12030 PF05138 Phenylacetic acid catabolic protein AM408_RS12035 PF06243 Phenylacetic acid degradation B AM408_RS12040 PF05138 Phenylacetic acid catabolic protein AM408_RS12045 PF00171 Aldehyde dehydrogenase family AM408_RS12045 PF01575 MaoC like domain AM408_RS12050 PF02727 Copper amine oxidase, N2 domain AM408_RS12050 PF07833 Copper amine oxidase N-terminal domain AM408_RS12050 PF02728 Copper amine oxidase, N3 domain AM408_RS12050 PF01179 Copper amine oxidase, enzyme domain AM408_RS12055 PF00171 Aldehyde dehydrogenase family AM408_RS12060 PF14525 AraC-binding-like domain AM408_RS12060 PF12833 Helix-turn-helix domain AM408_RS12065 PF07027 Protein of unknown function (DUF1318) AM408_RS12070 PF13617 YnbE-like lipoprotein AM408_RS12075 PF11739 Dicarboxylate transport AM408_RS12080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM408_RS12080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM408_RS12085 PF03724 META domain AM408_RS12090 PF03891 Domain of unknown function (DUF333) AM408_RS12095 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM408_RS12095 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM408_RS12095 PF10371 Domain of unknown function AM408_RS12095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS12095 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM408_RS12105 PF00267 Gram-negative porin AM408_RS12110 PF00582 Universal stress protein family AM408_RS12115 PF01171 PP-loop family AM408_RS12120 PF00270 DEAD/DEAH box helicase AM408_RS12120 PF03880 DbpA RNA binding domain AM408_RS12120 PF00271 Helicase conserved C-terminal domain AM408_RS12130 PF01544 CorA-like Mg2+ transporter protein AM408_RS12135 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS12135 PF08448 PAS fold AM408_RS12140 PF01713 Smr domain AM408_RS12150 PF03466 LysR substrate binding domain AM408_RS12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS12155 PF07687 Peptidase dimerisation domain AM408_RS12155 PF01546 Peptidase family M20/M25/M40 AM408_RS12160 PF01546 Peptidase family M20/M25/M40 AM408_RS12170 PF03806 AbgT putative transporter family AM408_RS12175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM408_RS12175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM408_RS12180 PF00325 Bacterial regulatory proteins, crp family AM408_RS12180 PF00027 Cyclic nucleotide-binding domain AM408_RS12185 PF00582 Universal stress protein family AM408_RS12190 PF10749 Protein of unknown function (DUF2534) AM408_RS12195 PF00924 Mechanosensitive ion channel AM408_RS12200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS12205 PF03466 LysR substrate binding domain AM408_RS12210 PF12146 Serine aminopeptidase, S33 AM408_RS12220 PF00246 Zinc carboxypeptidase AM408_RS12225 PF13378 Enolase C-terminal domain-like AM408_RS12225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM408_RS12230 PF08534 Redoxin AM408_RS12235 PF00158 Sigma-54 interaction domain AM408_RS12235 PF13188 PAS domain AM408_RS12235 PF18024 Helix-turn-helix domain AM408_RS12240 PF05128 Domain of unknown function (DUF697) AM408_RS12245 PF04317 YcjX-like family, DUF463 AM408_RS12250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM408_RS12250 PF00356 Bacterial regulatory proteins, lacI family AM408_RS12255 PF09381 Outer membrane protein G (OmpG) AM408_RS12260 PF03459 TOBE domain AM408_RS12260 PF17912 MalK OB fold domain AM408_RS12260 PF00005 ABC transporter AM408_RS12265 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS12270 PF03636 Glycosyl hydrolase family 65, N-terminal domain AM408_RS12270 PF03633 Glycosyl hydrolase family 65, C-terminal domain AM408_RS12270 PF03632 Glycosyl hydrolase family 65 central catalytic domain AM408_RS12275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM408_RS12275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM408_RS12280 PF01261 Xylose isomerase-like TIM barrel AM408_RS12285 PF00107 Zinc-binding dehydrogenase AM408_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS12295 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS12305 PF00128 Alpha amylase, catalytic domain AM408_RS12310 PF00581 Rhodanese-like domain AM408_RS12315 PF09584 Phage shock protein PspD (Phageshock_PspD) AM408_RS12320 PF04024 PspC domain AM408_RS12325 PF06667 Phage shock protein B AM408_RS12330 PF04012 PspA/IM30 family AM408_RS12335 PF02954 Bacterial regulatory protein, Fis family AM408_RS12335 PF00158 Sigma-54 interaction domain AM408_RS12340 PF00202 Aminotransferase class-III AM408_RS12345 PF01266 FAD dependent oxidoreductase AM408_RS12350 PF00171 Aldehyde dehydrogenase family AM408_RS12360 PF07883 Cupin domain AM408_RS12360 PF01381 Helix-turn-helix AM408_RS12365 PF07722 Peptidase C26 AM408_RS12370 PF00120 Glutamine synthetase, catalytic domain AM408_RS12375 PF00324 Amino acid permease AM408_RS12380 PF10820 Protein of unknown function (DUF2543) AM408_RS12390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS12400 PF12911 N-terminal TM domain of oligopeptide transport permease C AM408_RS12400 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS12405 PF00005 ABC transporter AM408_RS12405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS12410 PF00005 ABC transporter AM408_RS12415 PF04480 Protein of unknown function (DUF559) AM408_RS12430 PF17876 Cold shock domain AM408_RS12430 PF08206 Ribonuclease B OB domain AM408_RS12430 PF00575 S1 RNA binding domain AM408_RS12430 PF00773 RNB domain AM408_RS12440 PF13426 PAS domain AM408_RS12440 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS12440 PF00563 EAL domain AM408_RS12450 PF00455 DeoR C terminal sensor domain AM408_RS12450 PF08220 DeoR-like helix-turn-helix domain AM408_RS12455 PF05433 Glycine zipper 2TM domain AM408_RS12460 PF01253 Translation initiation factor SUI1 AM408_RS12465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM408_RS12470 PF18073 Rubredoxin metal binding domain AM408_RS12475 PF06305 Lipopolysaccharide assembly protein A domain AM408_RS12480 PF01569 PAP2 superfamily AM408_RS12485 PF00925 GTP cyclohydrolase II AM408_RS12490 PF00330 Aconitase family (aconitate hydratase) AM408_RS12490 PF00694 Aconitase C-terminal domain AM408_RS12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS12520 PF03466 LysR substrate binding domain AM408_RS12530 PF01751 Toprim domain AM408_RS12530 PF01396 Topoisomerase DNA binding C4 zinc finger AM408_RS12530 PF01131 DNA topoisomerase AM408_RS12530 PF08272 Topoisomerase I zinc-ribbon-like AM408_RS12540 PF10692 Protein of unknown function (DUF2498) AM408_RS12545 PF08496 Peptidase family S49 N-terminal AM408_RS12545 PF01343 Peptidase family S49 AM408_RS12550 PF00106 short chain dehydrogenase AM408_RS12555 PF12557 Cob(I)alamin adenosyltransferase N terminal AM408_RS12555 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM408_RS12560 PF01479 S4 domain AM408_RS12560 PF00849 RNA pseudouridylate synthase AM408_RS12565 PF09972 Predicted membrane protein (DUF2207) AM408_RS12570 PF01300 Telomere recombination AM408_RS12575 PF02811 PHP domain AM408_RS12580 PF08255 Trp-operon Leader Peptide AM408_RS12585 PF00425 chorismate binding enzyme AM408_RS12585 PF04715 Anthranilate synthase component I, N terminal region AM408_RS12590 PF00117 Glutamine amidotransferase class-I AM408_RS12590 PF02885 Glycosyl transferase family, helical bundle domain AM408_RS12590 PF00591 Glycosyl transferase family, a/b domain AM408_RS12595 PF00218 Indole-3-glycerol phosphate synthase AM408_RS12595 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM408_RS12600 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS12605 PF00290 Tryptophan synthase alpha chain AM408_RS12610 PF10685 Stress-induced bacterial acidophilic repeat motif AM408_RS12615 PF05974 Domain of unknown function (DUF892) AM408_RS12620 PF05974 Domain of unknown function (DUF892) AM408_RS12625 PF03922 OmpW family AM408_RS12640 PF04279 Intracellular septation protein A AM408_RS12645 PF03061 Thioesterase superfamily AM408_RS12650 PF03544 Gram-negative bacterial TonB protein C-terminal AM408_RS12655 PF03795 YCII-related domain AM408_RS12660 PF07885 Ion channel AM408_RS12660 PF02254 TrkA-N domain AM408_RS12670 PF13396 Phospholipase_D-nuclease N-terminal AM408_RS12670 PF13091 PLD-like domain AM408_RS12675 PF04269 Protein of unknown function, DUF440 AM408_RS12680 PF00005 ABC transporter AM408_RS12680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS12685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS12685 PF00005 ABC transporter AM408_RS12690 PF12911 N-terminal TM domain of oligopeptide transport permease C AM408_RS12690 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS12695 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS12700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS12710 PF01914 MarC family integral membrane protein AM408_RS12715 PF00171 Aldehyde dehydrogenase family AM408_RS12715 PF00465 Iron-containing alcohol dehydrogenase AM408_RS12725 PF00265 Thymidine kinase AM408_RS12730 PF00816 H-NS histone family AM408_RS12735 PF00483 Nucleotidyl transferase AM408_RS12740 PF00072 Response regulator receiver domain AM408_RS12745 PF01734 Patatin-like phospholipase AM408_RS12750 PF02810 SEC-C motif AM408_RS12755 PF01842 ACT domain AM408_RS12755 PF00551 Formyl transferase AM408_RS12790 PF02665 Nitrate reductase gamma subunit AM408_RS12795 PF02613 Nitrate reductase delta subunit AM408_RS12800 PF13247 4Fe-4S dicluster domain AM408_RS12800 PF14711 Respiratory nitrate reductase beta C-terminal AM408_RS12805 PF14710 Respiratory nitrate reductase alpha N-terminal AM408_RS12805 PF00384 Molybdopterin oxidoreductase AM408_RS12805 PF01568 Molydopterin dinucleotide binding domain AM408_RS12810 PF07690 Major Facilitator Superfamily AM408_RS12820 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM408_RS12820 PF07730 Histidine kinase AM408_RS12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS12820 PF00672 HAMP domain AM408_RS12825 PF00196 Bacterial regulatory proteins, luxR family AM408_RS12825 PF00072 Response regulator receiver domain AM408_RS12830 PF11924 Inverse autotransporter, beta-domain AM408_RS12835 PF02635 DsrE/DsrF-like family AM408_RS12840 PF04752 ChaC-like protein AM408_RS12845 PF06150 ChaB AM408_RS12850 PF01699 Sodium/calcium exchanger protein AM408_RS12855 PF13940 Toxin Ldr, type I toxin-antitoxin system AM408_RS12865 PF13940 Toxin Ldr, type I toxin-antitoxin system AM408_RS12875 PF13940 Toxin Ldr, type I toxin-antitoxin system AM408_RS12880 PF00793 DAHP synthetase I family AM408_RS12885 PF13369 Transglutaminase-like superfamily AM408_RS12890 PF04247 Invasion gene expression up-regulator, SirB AM408_RS12895 PF17827 PrmC N-terminal domain AM408_RS12895 PF13847 Methyltransferase domain AM408_RS12900 PF00472 RF-1 domain AM408_RS12900 PF03462 PCRF domain AM408_RS12905 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM408_RS12905 PF01488 Shikimate / quinate 5-dehydrogenase AM408_RS12905 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM408_RS12910 PF03550 Outer membrane lipoprotein LolB AM408_RS12915 PF08544 GHMP kinases C terminal AM408_RS12915 PF00288 GHMP kinases N terminal domain AM408_RS12920 PF14572 Phosphoribosyl synthetase-associated domain AM408_RS12920 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM408_RS12925 PF01740 STAS domain AM408_RS12925 PF00916 Sulfate permease family AM408_RS12930 PF10762 Protein of unknown function (DUF2583) AM408_RS12935 PF01195 Peptidyl-tRNA hydrolase AM408_RS12940 PF06071 Protein of unknown function (DUF933) AM408_RS12940 PF01926 50S ribosome-binding GTPase AM408_RS12955 PF03797 Autotransporter beta-domain AM408_RS12955 PF03212 Pertactin AM408_RS12960 PF02954 Bacterial regulatory protein, Fis family AM408_RS12960 PF00989 PAS fold AM408_RS12960 PF00158 Sigma-54 interaction domain AM408_RS12965 PF02733 Dak1 domain AM408_RS12970 PF02734 DAK2 domain AM408_RS12975 PF03610 PTS system fructose IIA component AM408_RS12975 PF00381 PTS HPr component phosphorylation site AM408_RS12975 PF05524 PEP-utilising enzyme, N-terminal AM408_RS12975 PF00391 PEP-utilising enzyme, mobile domain AM408_RS12985 PF01204 Trehalase AM408_RS12995 PF04226 Transglycosylase associated protein AM408_RS13000 PF07317 Flagellar regulator YcgR AM408_RS13000 PF07238 PilZ domain AM408_RS13005 PF01464 Transglycosylase SLT domain AM408_RS13015 PF02016 LD-carboxypeptidase N-terminal domain AM408_RS13015 PF17676 LD-carboxypeptidase C-terminal domain AM408_RS13020 PF03471 Transporter associated domain AM408_RS13020 PF00999 Sodium/hydrogen exchanger family AM408_RS13020 PF02080 TrkA-C domain AM408_RS13025 PF00842 Alanine racemase, C-terminal domain AM408_RS13025 PF01168 Alanine racemase, N-terminal domain AM408_RS13030 PF01266 FAD dependent oxidoreductase AM408_RS13035 PF04293 SpoVR like protein AM408_RS13040 PF07840 FadR C-terminal domain AM408_RS13040 PF00392 Bacterial regulatory proteins, gntR family AM408_RS13045 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM408_RS13050 PF02600 Disulfide bond formation protein DsbB AM408_RS13055 PF00817 impB/mucB/samB family AM408_RS13055 PF13438 Domain of unknown function (DUF4113) AM408_RS13055 PF11799 impB/mucB/samB family C-terminal domain AM408_RS13055 PF11798 IMS family HHH motif AM408_RS13060 PF00717 Peptidase S24-like AM408_RS13065 PF06109 Haemolysin E (HlyE) AM408_RS13070 PF03692 Putative zinc- or iron-chelating domain AM408_RS13075 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM408_RS13080 PF05166 YcgL domain AM408_RS13090 PF04151 Bacterial pre-peptidase C-terminal domain AM408_RS13095 PF05666 Fels-1 Prophage Protein-like AM408_RS13105 PF05209 Septum formation inhibitor MinC, N-terminal domain AM408_RS13105 PF03775 Septum formation inhibitor MinC, C-terminal domain AM408_RS13110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM408_RS13115 PF03776 Septum formation topological specificity factor MinE AM408_RS13140 PF13436 Glycine-zipper domain AM408_RS13165 PF12792 CSS motif domain associated with EAL AM408_RS13165 PF00563 EAL domain AM408_RS13175 PF10798 Biofilm development protein YmgB/AriR AM408_RS13185 PF10798 Biofilm development protein YmgB/AriR AM408_RS13190 PF00563 EAL domain AM408_RS13190 PF04940 Sensors of blue-light using FAD AM408_RS13195 PF13411 MerR HTH family regulatory protein AM408_RS13200 PF07166 Protein of unknown function (DUF1398) AM408_RS13210 PF00180 Isocitrate/isopropylmalate dehydrogenase AM408_RS13215 PF00849 RNA pseudouridylate synthase AM408_RS13220 PF00293 NUDIX domain AM408_RS13230 PF04356 Protein of unknown function (DUF489) AM408_RS13235 PF08328 Adenylosuccinate lyase C-terminal AM408_RS13235 PF00206 Lyase AM408_RS13240 PF00486 Transcriptional regulatory protein, C terminal AM408_RS13240 PF00072 Response regulator receiver domain AM408_RS13245 PF08918 PhoQ Sensor AM408_RS13245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS13250 PF08007 Cupin superfamily protein AM408_RS13255 PF01546 Peptidase family M20/M25/M40 AM408_RS13255 PF07687 Peptidase dimerisation domain AM408_RS13265 PF08402 TOBE domain AM408_RS13265 PF00005 ABC transporter AM408_RS13270 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS13280 PF08242 Methyltransferase domain AM408_RS13290 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM408_RS13315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS13320 PF13276 HTH-like domain AM408_RS13320 PF13333 Integrase core domain AM408_RS13320 PF00665 Integrase core domain AM408_RS13330 PF08400 Prophage tail fibre N-terminal AM408_RS13330 PF03335 Phage tail fibre repeat AM408_RS13330 PF07484 Phage Tail Collar Domain AM408_RS13335 PF06316 Enterobacterial Ail/Lom protein AM408_RS13440 PF06291 Bor protein AM408_RS13445 PF06085 Lipoprotein Rz1 precursor AM408_RS13455 PF00959 Phage lysozyme AM408_RS13460 PF07041 Protein of unknown function (DUF1327) AM408_RS13465 PF04971 Bacteriophage P21 holin S AM408_RS13500 PF03589 Antitermination protein AM408_RS13505 PF00665 Integrase core domain AM408_RS13510 PF01695 IstB-like ATP binding protein AM408_RS13515 PF03589 Antitermination protein AM408_RS13520 PF05866 Endodeoxyribonuclease RusA AM408_RS13525 PF06147 Protein of unknown function (DUF968) AM408_RS13535 PF01848 Hok/gef family AM408_RS13560 PF17948 DnaT DNA-binding domain AM408_RS13600 PF05358 DicB protein AM408_RS13605 PF07358 Protein of unknown function (DUF1482) AM408_RS13610 PF06630 Enterobacterial exodeoxyribonuclease VIII AM408_RS13610 PF12684 PDDEXK-like domain of unknown function (DUF3799) AM408_RS13620 PF00589 Phage integrase family AM408_RS13620 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AM408_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS13630 PF13416 Bacterial extracellular solute-binding protein AM408_RS13635 PF12158 Protein of unknown function (DUF3592) AM408_RS13640 PF04536 TPM domain AM408_RS13645 PF02146 Sir2 family AM408_RS13650 PF00480 ROK family AM408_RS13655 PF12704 MacB-like periplasmic core domain AM408_RS13655 PF02687 FtsX-like permease family AM408_RS13660 PF00005 ABC transporter AM408_RS13665 PF12704 MacB-like periplasmic core domain AM408_RS13665 PF02687 FtsX-like permease family AM408_RS13670 PF01757 Acyltransferase family AM408_RS13675 PF17757 UvrB interaction domain AM408_RS13675 PF02559 CarD-like/TRCF domain AM408_RS13675 PF00270 DEAD/DEAH box helicase AM408_RS13675 PF00271 Helicase conserved C-terminal domain AM408_RS13675 PF03461 TRCF domain AM408_RS13680 PF03734 L,D-transpeptidase catalytic domain AM408_RS13680 PF17969 L,D-transpeptidase C-terminal domain AM408_RS13680 PF01476 LysM domain AM408_RS13685 PF07338 Protein of unknown function (DUF1471) AM408_RS13690 PF00440 Bacterial regulatory proteins, tetR family AM408_RS13695 PF05433 Glycine zipper 2TM domain AM408_RS13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS13710 PF05728 Uncharacterised protein family (UPF0227) AM408_RS13715 PF00933 Glycosyl hydrolase family 3 N terminal domain AM408_RS13720 PF01636 Phosphotransferase enzyme family AM408_RS13725 PF13036 Peptidoglycan-synthase activator LpoB AM408_RS13730 PF07233 Protein of unknown function (DUF1425) AM408_RS13735 PF01230 HIT domain AM408_RS13740 PF00593 TonB dependent receptor AM408_RS13740 PF07715 TonB-dependent Receptor Plug Domain AM408_RS13745 PF02378 Phosphotransferase system, EIIC AM408_RS13745 PF00367 phosphotransferase system, EIIB AM408_RS13750 PF01026 TatD related DNase AM408_RS13755 PF09115 DNA polymerase III, delta subunit, C terminal AM408_RS13760 PF02223 Thymidylate kinase AM408_RS13765 PF02618 YceG-like family AM408_RS13770 PF01063 Amino-transferase class IV AM408_RS13775 PF00109 Beta-ketoacyl synthase, N-terminal domain AM408_RS13775 PF02801 Beta-ketoacyl synthase, C-terminal domain AM408_RS13780 PF00550 Phosphopantetheine attachment site AM408_RS13790 PF00698 Acyl transferase domain AM408_RS13795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM408_RS13795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM408_RS13800 PF02504 Fatty acid synthesis protein AM408_RS13805 PF01783 Ribosomal L32p protein family AM408_RS13810 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM408_RS13815 PF02545 Maf-like protein AM408_RS13820 PF00849 RNA pseudouridylate synthase AM408_RS13820 PF01479 S4 domain AM408_RS13835 PF00575 S1 RNA binding domain AM408_RS13835 PF12111 Polyribonucleotide phosphorylase C terminal AM408_RS13835 PF10150 Ribonuclease E/G family AM408_RS13840 PF00669 Bacterial flagellin N-terminal helical region AM408_RS13845 PF00460 Flagella basal body rod protein AM408_RS13845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM408_RS13850 PF10135 Rod binding protein AM408_RS13850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM408_RS13855 PF02119 Flagellar P-ring protein AM408_RS13860 PF02107 Flagellar L-ring protein AM408_RS13865 PF00460 Flagella basal body rod protein AM408_RS13865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM408_RS13870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM408_RS13870 PF00460 Flagella basal body rod protein AM408_RS13875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM408_RS13875 PF00460 Flagella basal body rod protein AM408_RS13875 PF07559 Flagellar basal body protein FlaE AM408_RS13880 PF03963 Flagellar hook capping protein - N-terminal region AM408_RS13880 PF13860 FlgD Ig-like domain AM408_RS13880 PF13861 FlgD Tudor-like domain AM408_RS13885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM408_RS13885 PF00460 Flagella basal body rod protein AM408_RS13890 PF00460 Flagella basal body rod protein AM408_RS13895 PF13144 Chaperone for flagella basal body P-ring formation AM408_RS13900 PF04316 Anti-sigma-28 factor, FlgM AM408_RS13905 PF05130 FlgN protein AM408_RS13910 PF03023 Lipid II flippase MurJ AM408_RS13915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM408_RS13920 PF04337 Protein of unknown function, DUF480 AM408_RS13925 PF13302 Acetyltransferase (GNAT) domain AM408_RS13930 PF07690 Major Facilitator Superfamily AM408_RS13935 PF04399 Glutaredoxin 2, C terminal domain AM408_RS13935 PF13417 Glutathione S-transferase, N-terminal domain AM408_RS13940 PF07273 Protein of unknown function (DUF1439) AM408_RS13945 PF01979 Amidohydrolase family AM408_RS13950 PF06183 DinI-like family AM408_RS13955 PF13991 BssS protein family AM408_RS13960 PF01266 FAD dependent oxidoreductase AM408_RS13965 PF10968 Protein of unknown function (DUF2770) AM408_RS13970 PF01292 Prokaryotic cytochrome b561 AM408_RS13975 PF04264 YceI-like domain AM408_RS13980 PF00581 Rhodanese-like domain AM408_RS13980 PF17773 UPF0176 acylphosphatase like domain AM408_RS13980 PF12368 Rhodanase C-terminal AM408_RS13985 PF03279 Bacterial lipid A biosynthesis acyltransferase AM408_RS13990 PF07690 Major Facilitator Superfamily AM408_RS13995 PF13984 MsyB protein AM408_RS14000 PF07119 Protein of unknown function (DUF1375) AM408_RS14005 PF00535 Glycosyl transferase family 2 AM408_RS14010 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM408_RS14025 PF01757 Acyltransferase family AM408_RS14030 PF13091 PLD-like domain AM408_RS14035 PF01661 Macro domain AM408_RS14045 PF10610 Thin aggregative fimbriae synthesis protein AM408_RS14050 PF07012 Curlin associated repeat AM408_RS14055 PF07012 Curlin associated repeat AM408_RS14070 PF00196 Bacterial regulatory proteins, luxR family AM408_RS14075 PF10627 Curli assembly protein CsgE AM408_RS14080 PF10614 Type VIII secretion system (T8SS), CsgF protein AM408_RS14085 PF03783 Curli production assembly/transport component CsgG AM408_RS14090 PF06496 Protein of unknown function (DUF1097) AM408_RS14095 PF02613 Nitrate reductase delta subunit AM408_RS14100 PF02811 PHP domain AM408_RS14105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM408_RS14135 PF17158 Membrane-associated sensor, integral membrane domain AM408_RS14135 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS14145 PF01522 Polysaccharide deacetylase AM408_RS14145 PF14883 Hypothetical glycosyl hydrolase family 13 AM408_RS14150 PF00535 Glycosyl transferase family 2 AM408_RS14155 PF13994 PgaD-like protein AM408_RS14160 PF02562 PhoH-like protein AM408_RS14170 PF04261 Dyp-type peroxidase family AM408_RS14175 PF09375 Imelysin AM408_RS14175 PF13473 Cupredoxin-like domain AM408_RS14180 PF03239 Iron permease FTR1 family AM408_RS14195 PF00474 Sodium:solute symporter family AM408_RS14210 PF01619 Proline dehydrogenase AM408_RS14210 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM408_RS14210 PF00171 Aldehyde dehydrogenase family AM408_RS14210 PF14850 DNA-binding domain of Proline dehydrogenase AM408_RS14215 PF00440 Bacterial regulatory proteins, tetR family AM408_RS14215 PF08362 YcdC-like protein, C-terminal region AM408_RS14220 PF00296 Luciferase-like monooxygenase AM408_RS14225 PF00857 Isochorismatase family AM408_RS14230 PF01042 Endoribonuclease L-PSP AM408_RS14235 PF12697 Alpha/beta hydrolase family AM408_RS14240 PF00881 Nitroreductase family AM408_RS14245 PF01613 Flavin reductase like domain AM408_RS14250 PF00860 Permease family AM408_RS14255 PF10685 Stress-induced bacterial acidophilic repeat motif AM408_RS14265 PF03358 NADPH-dependent FMN reductase AM408_RS14270 PF13993 YccJ-like protein AM408_RS14275 PF00328 Histidine phosphatase superfamily (branch 2) AM408_RS14285 PF01556 DnaJ C terminal domain AM408_RS14285 PF00226 DnaJ domain AM408_RS14295 PF02613 Nitrate reductase delta subunit AM408_RS14300 PF01568 Molydopterin dinucleotide binding domain AM408_RS14300 PF18364 Molybdopterin oxidoreductase N-terminal domain AM408_RS14300 PF00384 Molybdopterin oxidoreductase AM408_RS14305 PF03264 NapC/NirT cytochrome c family, N-terminal region AM408_RS14310 PF00072 Response regulator receiver domain AM408_RS14310 PF00486 Transcriptional regulatory protein, C terminal AM408_RS14315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM408_RS14320 PF00072 Response regulator receiver domain AM408_RS14320 PF01627 Hpt domain AM408_RS14320 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS14320 PF00672 HAMP domain AM408_RS14325 PF12801 4Fe-4S binding domain AM408_RS14330 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system AM408_RS14335 PF15939 Putative antitoxin of bacterial toxin-antitoxin system AM408_RS14345 PF00313 'Cold-shock' DNA-binding domain AM408_RS14350 PF00313 'Cold-shock' DNA-binding domain AM408_RS14360 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM408_RS14365 PF06251 Capsule biosynthesis GfcC AM408_RS14370 PF06082 Exopolysaccharide biosynthesis protein YbjH AM408_RS14375 PF10531 SLBB domain AM408_RS14375 PF02563 Polysaccharide biosynthesis/export protein AM408_RS14375 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM408_RS14380 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM408_RS14385 PF13614 AAA domain AM408_RS14385 PF13807 G-rich domain on putative tyrosine kinase AM408_RS14385 PF02706 Chain length determinant protein AM408_RS14390 PF00328 Histidine phosphatase superfamily (branch 2) AM408_RS14395 PF08173 Membrane bound YbgT-like protein AM408_RS14400 PF02322 Cytochrome bd terminal oxidase subunit II AM408_RS14405 PF01654 Cytochrome bd terminal oxidase subunit I AM408_RS14410 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AM408_RS14415 PF07449 Hydrogenase-1 expression protein HyaE AM408_RS14420 PF01750 Hydrogenase maturation protease AM408_RS14425 PF01292 Prokaryotic cytochrome b561 AM408_RS14430 PF00374 Nickel-dependent hydrogenase AM408_RS14435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM408_RS14435 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM408_RS14445 PF01027 Inhibitor of apoptosis-promoting Bax1 AM408_RS14450 PF04358 DsrC like protein AM408_RS14455 PF00708 Acylphosphatase AM408_RS14460 PF10672 S-adenosylmethionine-dependent methyltransferase AM408_RS14460 PF17785 PUA-like domain AM408_RS14465 PF08755 Hemimethylated DNA-binding protein YccV like AM408_RS14470 PF13380 CoA binding domain AM408_RS14475 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM408_RS14480 PF02142 MGS-like domain AM408_RS14485 PF00580 UvrD/REP helicase N-terminal domain AM408_RS14485 PF12462 DNA helicase IV / RNA helicase N terminal AM408_RS14485 PF13361 UvrD-like helicase C-terminal domain AM408_RS14490 PF03733 Inner membrane component domain AM408_RS14495 PF12805 FUSC-like inner membrane protein yccS AM408_RS14500 PF04993 TfoX N-terminal domain AM408_RS14500 PF04994 TfoX C-terminal domain AM408_RS14505 PF03846 Cell division inhibitor SulA AM408_RS14515 PF00691 OmpA family AM408_RS14515 PF01389 OmpA-like transmembrane domain AM408_RS14520 PF06303 MatP N-terminal domain AM408_RS14520 PF17414 MatP C-terminal ribbon-helix-helix domain AM408_RS14525 PF13654 AAA domain AM408_RS14525 PF05362 Lon protease (S16) C-terminal proteolytic domain AM408_RS14530 PF07977 FabA-like domain AM408_RS14535 PF04957 Ribosome modulation factor AM408_RS14540 PF03886 ABC-type transport auxiliary lipoprotein component AM408_RS14545 PF02470 MlaD protein AM408_RS14550 PF04403 Paraquat-inducible protein A AM408_RS14555 PF00005 ABC transporter AM408_RS14555 PF16326 ABC transporter C-terminal domain AM408_RS14555 PF12848 ABC transporter AM408_RS14560 PF01170 Putative RNA methylase family UPF0020 AM408_RS14560 PF02926 THUMP domain AM408_RS14560 PF10672 S-adenosylmethionine-dependent methyltransferase AM408_RS14565 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS14565 PF03473 MOSC domain AM408_RS14565 PF03476 MOSC N-terminal beta barrel domain AM408_RS14570 PF07126 Cell-division protein ZapC AM408_RS14575 PF01180 Dihydroorotate dehydrogenase AM408_RS14580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS14580 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS14585 PF00419 Fimbrial protein AM408_RS14590 PF00419 Fimbrial protein AM408_RS14595 PF00419 Fimbrial protein AM408_RS14600 PF13954 PapC N-terminal domain AM408_RS14600 PF00577 Outer membrane usher protein AM408_RS14600 PF13953 PapC C-terminal domain AM408_RS14605 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS14605 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS14610 PF00419 Fimbrial protein AM408_RS14620 PF03358 NADPH-dependent FMN reductase AM408_RS14625 PF09084 NMT1/THI5 like AM408_RS14630 PF00296 Luciferase-like monooxygenase AM408_RS14635 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS14640 PF00005 ABC transporter AM408_RS14645 PF01433 Peptidase family M1 domain AM408_RS14645 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM408_RS14645 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM408_RS14650 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM408_RS14650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM408_RS14655 PF00152 tRNA synthetases class II (D, K and N) AM408_RS14655 PF01336 OB-fold nucleic acid binding domain AM408_RS14660 PF00267 Gram-negative porin AM408_RS14670 PF00155 Aminotransferase class I and II AM408_RS14680 PF00753 Metallo-beta-lactamase superfamily AM408_RS14685 PF05951 Bacterial protein of unknown function (DUF882) AM408_RS14695 PF03734 L,D-transpeptidase catalytic domain AM408_RS14695 PF01471 Putative peptidoglycan binding domain AM408_RS14700 PF16330 MukB hinge domain AM408_RS14700 PF04310 MukB N-terminal AM408_RS14705 PF04288 MukE-like family AM408_RS14710 PF03882 MukF winged-helix domain AM408_RS14710 PF17192 MukF middle domain AM408_RS14710 PF17193 MukF C-terminal domain AM408_RS14715 PF13847 Methyltransferase domain AM408_RS14725 PF02698 DUF218 domain AM408_RS14730 PF01636 Phosphotransferase enzyme family AM408_RS14735 PF02348 Cytidylyltransferase AM408_RS14740 PF03966 Trm112p-like protein AM408_RS14745 PF06224 Winged helix DNA-binding domain AM408_RS14750 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM408_RS14755 PF00664 ABC transporter transmembrane region AM408_RS14755 PF00005 ABC transporter AM408_RS14760 PF00753 Metallo-beta-lactamase superfamily AM408_RS14760 PF03772 Competence protein AM408_RS14765 PF00216 Bacterial DNA-binding protein AM408_RS14770 PF00575 S1 RNA binding domain AM408_RS14775 PF02224 Cytidylate kinase AM408_RS14780 PF01435 Peptidase family M48 AM408_RS14785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM408_RS14790 PF00266 Aminotransferase class-V AM408_RS14795 PF04239 Protein of unknown function (DUF421) AM408_RS14800 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM408_RS14800 PF18381 YcaO cyclodehydratase C-terminal domain AM408_RS14805 PF01226 Formate/nitrite transporter AM408_RS14810 PF02901 Pyruvate formate lyase-like AM408_RS14810 PF01228 Glycine radical AM408_RS14815 PF04055 Radical SAM superfamily AM408_RS14820 PF02525 Flavodoxin-like fold AM408_RS14825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS14825 PF03466 LysR substrate binding domain AM408_RS14830 PF13520 Amino acid permease AM408_RS14835 PF07690 Major Facilitator Superfamily AM408_RS14840 PF00857 Isochorismatase family AM408_RS14845 PF04976 DMSO reductase anchor subunit (DmsC) AM408_RS14850 PF13247 4Fe-4S dicluster domain AM408_RS14850 PF12800 4Fe-4S binding domain AM408_RS14855 PF00384 Molybdopterin oxidoreductase AM408_RS14855 PF01568 Molydopterin dinucleotide binding domain AM408_RS14855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM408_RS14860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM408_RS14860 PF02403 Seryl-tRNA synthetase N-terminal domain AM408_RS14865 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS14865 PF12002 MgsA AAA+ ATPase C terminal AM408_RS14865 PF16193 AAA C-terminal domain AM408_RS14870 PF03548 Outer membrane lipoprotein carrier protein LolA AM408_RS14875 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM408_RS14875 PF17854 FtsK alpha domain AM408_RS14875 PF01580 FtsK/SpoIIIE family AM408_RS14875 PF09397 Ftsk gamma domain AM408_RS14880 PF01037 Lrp/AsnC ligand binding domain AM408_RS14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS14895 PF00005 ABC transporter AM408_RS14895 PF00664 ABC transporter transmembrane region AM408_RS14900 PF00005 ABC transporter AM408_RS14900 PF00664 ABC transporter transmembrane region AM408_RS14905 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM408_RS14915 PF01176 Translation initiation factor 1A / IF-1 AM408_RS14925 PF02861 Clp amino terminal domain, pathogenicity island component AM408_RS14925 PF17871 AAA lid domain AM408_RS14925 PF07724 AAA domain (Cdc48 subfamily) AM408_RS14925 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS14925 PF10431 C-terminal, D2-small domain, of ClpB protein AM408_RS14930 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM408_RS14935 PF00313 'Cold-shock' DNA-binding domain AM408_RS14940 PF12704 MacB-like periplasmic core domain AM408_RS14940 PF00005 ABC transporter AM408_RS14940 PF02687 FtsX-like permease family AM408_RS14945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS14950 PF04393 Protein of unknown function (DUF535) AM408_RS14955 PF11398 Protein of unknown function (DUF2813) AM408_RS14960 PF00230 Major intrinsic protein AM408_RS14970 PF03956 Lysine exporter LysO AM408_RS14975 PF03063 Prismane/CO dehydrogenase family AM408_RS14980 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS14980 PF00970 Oxidoreductase FAD-binding domain AM408_RS14980 PF00175 Oxidoreductase NAD-binding domain AM408_RS14985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS14985 PF00205 Thiamine pyrophosphate enzyme, central domain AM408_RS14985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM408_RS14990 PF01212 Beta-eliminating lyase AM408_RS14995 PF11066 Protein of unknown function (DUF2867) AM408_RS14995 PF13460 NAD(P)H-binding AM408_RS15000 PF01370 NAD dependent epimerase/dehydratase family AM408_RS15005 PF01510 N-acetylmuramoyl-L-alanine amidase AM408_RS15010 PF01906 Putative heavy-metal-binding AM408_RS15015 PF12883 Protein of unknown function (DUF3828) AM408_RS15020 PF00005 ABC transporter AM408_RS15025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS15030 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15035 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15040 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS15045 PF05958 tRNA (Uracil-5-)-methyltransferase AM408_RS15050 PF10767 Protein of unknown function (DUF2593) AM408_RS15055 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15060 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15065 PF00005 ABC transporter AM408_RS15065 PF08402 TOBE domain AM408_RS15070 PF13416 Bacterial extracellular solute-binding protein AM408_RS15080 PF10722 Putative bacterial sensory transduction regulator AM408_RS15085 PF08443 RimK-like ATP-grasp domain AM408_RS15085 PF18030 RimK PreATP-grasp domain AM408_RS15090 PF00881 Nitroreductase family AM408_RS15095 PF07214 Protein of unknown function (DUF1418) AM408_RS15100 PF00462 Glutaredoxin AM408_RS15105 PF11045 Putative inner membrane protein of Enterobacteriaceae AM408_RS15110 PF02080 TrkA-C domain AM408_RS15110 PF06826 Predicted Permease Membrane Region AM408_RS15115 PF00440 Bacterial regulatory proteins, tetR family AM408_RS15120 PF07690 Major Facilitator Superfamily AM408_RS15135 PF07690 Major Facilitator Superfamily AM408_RS15140 PF01569 PAP2 superfamily AM408_RS15145 PF08220 DeoR-like helix-turn-helix domain AM408_RS15145 PF00455 DeoR C terminal sensor domain AM408_RS15150 PF00768 D-alanyl-D-alanine carboxypeptidase AM408_RS15150 PF07943 Penicillin-binding protein 5, C-terminal domain AM408_RS15155 PF00043 Glutathione S-transferase, C-terminal domain AM408_RS15155 PF13417 Glutathione S-transferase, N-terminal domain AM408_RS15160 PF07995 Glucose / Sorbosone dehydrogenase AM408_RS15165 PF10799 Biofilm formation protein (YliH/bssR) AM408_RS15170 PF04055 Radical SAM superfamily AM408_RS15170 PF00919 Uncharacterized protein family UPF0004 AM408_RS15170 PF18693 TRAM domain AM408_RS15175 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS15175 PF17156 Gammaproteobacterial periplasmic sensor domain AM408_RS15185 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15185 PF12911 N-terminal TM domain of oligopeptide transport permease C AM408_RS15190 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS15200 PF00005 ABC transporter AM408_RS15200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS15205 PF01112 Asparaginase AM408_RS15210 PF03454 MoeA C-terminal region (domain IV) AM408_RS15210 PF00994 Probable molybdopterin binding domain AM408_RS15210 PF03453 MoeA N-terminal region (domain I and II) AM408_RS15215 PF00899 ThiF family AM408_RS15220 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM408_RS15225 PF04055 Radical SAM superfamily AM408_RS15230 PF01228 Glycine radical AM408_RS15230 PF02901 Pyruvate formate lyase-like AM408_RS15240 PF07350 Protein of unknown function (DUF1479) AM408_RS15245 PF12848 ABC transporter AM408_RS15245 PF00005 ABC transporter AM408_RS15250 PF03734 L,D-transpeptidase catalytic domain AM408_RS15250 PF17969 L,D-transpeptidase C-terminal domain AM408_RS15255 PF03600 Citrate transporter AM408_RS15260 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM408_RS15260 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM408_RS15270 PF00884 Sulfatase AM408_RS15275 PF13505 Outer membrane protein beta-barrel domain AM408_RS15280 PF00892 EamA-like transporter family AM408_RS15290 PF00210 Ferritin-like domain AM408_RS15305 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS15310 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15315 PF00005 ABC transporter AM408_RS15320 PF00924 Mechanosensitive ion channel AM408_RS15325 PF05971 RNA methyltransferase AM408_RS15330 PF07338 Protein of unknown function (DUF1471) AM408_RS15335 PF00593 TonB dependent receptor AM408_RS15335 PF07715 TonB-dependent Receptor Plug Domain AM408_RS15340 PF13640 2OG-Fe(II) oxygenase superfamily AM408_RS15340 PF18331 PKHD-type hydroxylase C-terminal domain AM408_RS15345 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM408_RS15350 PF07338 Protein of unknown function (DUF1471) AM408_RS15355 PF02615 Malate/L-lactate dehydrogenase AM408_RS15360 PF02885 Glycosyl transferase family, helical bundle domain AM408_RS15365 PF13307 Helicase C-terminal domain AM408_RS15365 PF00270 DEAD/DEAH box helicase AM408_RS15365 PF06733 DEAD_2 AM408_RS15375 PF08719 Domain of unknown function (DUF1768) AM408_RS15380 PF00270 DEAD/DEAH box helicase AM408_RS15380 PF00271 Helicase conserved C-terminal domain AM408_RS15385 PF00440 Bacterial regulatory proteins, tetR family AM408_RS15385 PF09209 Tetracyclin repressor-like, C-terminal domain AM408_RS15390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS15395 PF00005 ABC transporter AM408_RS15410 PF11076 Putative inner membrane protein YbhQ AM408_RS15415 PF03372 Endonuclease/Exonuclease/phosphatase family AM408_RS15420 PF13091 PLD-like domain AM408_RS15425 PF03706 Lysylphosphatidylglycerol synthase TM region AM408_RS15430 PF01027 Inhibitor of apoptosis-promoting Bax1 AM408_RS15435 PF01027 Inhibitor of apoptosis-promoting Bax1 AM408_RS15440 PF02391 MoaE protein AM408_RS15445 PF02597 ThiS family AM408_RS15450 PF01967 MoaC family AM408_RS15455 PF00994 Probable molybdopterin binding domain AM408_RS15460 PF04055 Radical SAM superfamily AM408_RS15460 PF06463 Molybdenum Cofactor Synthesis C AM408_RS15465 PF01933 Uncharacterised protein family UPF0052 AM408_RS15470 PF00271 Helicase conserved C-terminal domain AM408_RS15470 PF04851 Type III restriction enzyme, res subunit AM408_RS15470 PF02151 UvrB/uvrC motif AM408_RS15470 PF17757 UvrB interaction domain AM408_RS15470 PF12344 Ultra-violet resistance protein B AM408_RS15480 PF08241 Methyltransferase domain AM408_RS15485 PF00155 Aminotransferase class I and II AM408_RS15490 PF04055 Radical SAM superfamily AM408_RS15490 PF06968 Biotin and Thiamin Synthesis associated domain AM408_RS15495 PF00202 Aminotransferase class-III AM408_RS15500 PF01161 Phosphatidylethanolamine-binding protein AM408_RS15510 PF01095 Pectinesterase AM408_RS15515 PF00330 Aconitase family (aconitate hydratase) AM408_RS15515 PF00694 Aconitase C-terminal domain AM408_RS15520 PF00939 Sodium:sulfate symporter transmembrane region AM408_RS15525 PF04303 PrpF protein AM408_RS15530 PF03466 LysR substrate binding domain AM408_RS15530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS15535 PF10282 Lactonase, 7-bladed beta-propeller AM408_RS15545 PF03459 TOBE domain AM408_RS15545 PF00005 ABC transporter AM408_RS15550 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS15565 PF10766 Multidrug efflux pump-associated protein AcrZ AM408_RS15570 PF03459 TOBE domain AM408_RS15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS15575 PF00005 ABC transporter AM408_RS15580 PF16363 GDP-mannose 4,6 dehydratase AM408_RS15585 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM408_RS15585 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM408_RS15590 PF10509 Galactokinase galactose-binding signature AM408_RS15590 PF08544 GHMP kinases C terminal AM408_RS15590 PF00288 GHMP kinases N terminal domain AM408_RS15595 PF01263 Aldose 1-epimerase AM408_RS15600 PF00300 Histidine phosphatase superfamily (branch 1) AM408_RS15605 PF00793 DAHP synthetase I family AM408_RS15615 PF13985 YbgS-like protein AM408_RS15620 PF01545 Cation efflux family AM408_RS15625 PF04973 Nicotinamide mononucleotide transporter AM408_RS15630 PF02445 Quinolinate synthetase A protein AM408_RS15675 PF16331 TolA binding protein trimerisation AM408_RS15675 PF13174 Tetratricopeptide repeat AM408_RS15680 PF00691 OmpA family AM408_RS15685 PF07676 WD40-like Beta Propeller Repeat AM408_RS15685 PF04052 TolB amino-terminal domain AM408_RS15690 PF06519 TolA C-terminal AM408_RS15695 PF02472 Biopolymer transport protein ExbD/TolR AM408_RS15700 PF01618 MotA/TolQ/ExbB proton channel family AM408_RS15705 PF03061 Thioesterase superfamily AM408_RS15710 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM408_RS15715 PF08173 Membrane bound YbgT-like protein AM408_RS15720 PF02322 Cytochrome bd terminal oxidase subunit II AM408_RS15725 PF01654 Cytochrome bd terminal oxidase subunit I AM408_RS15735 PF01074 Glycosyl hydrolases family 38 N-terminal domain AM408_RS15735 PF09261 Alpha mannosidase middle domain AM408_RS15735 PF07748 Glycosyl hydrolases family 38 C-terminal domain AM408_RS15740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS15740 PF02378 Phosphotransferase system, EIIC AM408_RS15740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS15745 PF07702 UTRA domain AM408_RS15745 PF00392 Bacterial regulatory proteins, gntR family AM408_RS15750 PF02629 CoA binding domain AM408_RS15750 PF00549 CoA-ligase AM408_RS15755 PF08442 ATP-grasp domain AM408_RS15755 PF00549 CoA-ligase AM408_RS15760 PF02817 e3 binding domain AM408_RS15760 PF00364 Biotin-requiring enzyme AM408_RS15760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM408_RS15765 PF16078 2-oxoglutarate dehydrogenase N-terminus AM408_RS15765 PF00676 Dehydrogenase E1 component AM408_RS15765 PF16870 2-oxoglutarate dehydrogenase C-terminal AM408_RS15765 PF02779 Transketolase, pyrimidine binding domain AM408_RS15770 PF13085 2Fe-2S iron-sulfur cluster binding domain AM408_RS15775 PF02910 Fumarate reductase flavoprotein C-term AM408_RS15775 PF00890 FAD binding domain AM408_RS15780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM408_RS15785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM408_RS15800 PF00285 Citrate synthase, C-terminal domain AM408_RS15805 PF00419 Fimbrial protein AM408_RS15810 PF00577 Outer membrane usher protein AM408_RS15810 PF13954 PapC N-terminal domain AM408_RS15810 PF13953 PapC C-terminal domain AM408_RS15815 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS15815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS15820 PF00419 Fimbrial protein AM408_RS15825 PF05145 Transition state regulatory protein AbrB AM408_RS15830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM408_RS15830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM408_RS15830 PF06827 Zinc finger found in FPG and IleRS AM408_RS15835 PF03746 LamB/YcsF family AM408_RS15840 PF02626 Carboxyltransferase domain, subdomain A and B AM408_RS15845 PF02682 Carboxyltransferase domain, subdomain C and D AM408_RS15850 PF01784 NIF3 (NGG1p interacting factor 3) AM408_RS15855 PF00854 POT family AM408_RS15860 PF00875 DNA photolyase AM408_RS15860 PF03441 FAD binding domain of DNA photolyase AM408_RS15865 PF08349 Protein of unknown function (DUF1722) AM408_RS15870 PF13808 DDE_Tnp_1-associated AM408_RS15870 PF01609 Transposase DDE domain AM408_RS15880 PF13808 DDE_Tnp_1-associated AM408_RS15890 PF03527 RHS protein AM408_RS15890 PF05593 RHS Repeat AM408_RS15900 PF05593 RHS Repeat AM408_RS15900 PF03527 RHS protein AM408_RS15905 PF10725 Protein of unknown function (DUF2517) AM408_RS15910 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AM408_RS15915 PF03814 Potassium-transporting ATPase A subunit AM408_RS15925 PF02669 K+-transporting ATPase, c chain AM408_RS15930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS15930 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS15930 PF13492 GAF domain AM408_RS15930 PF13493 Domain of unknown function (DUF4118) AM408_RS15930 PF02702 Osmosensitive K+ channel His kinase sensor domain AM408_RS15935 PF00072 Response regulator receiver domain AM408_RS15935 PF00486 Transcriptional regulatory protein, C terminal AM408_RS15945 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM408_RS15945 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM408_RS15945 PF01276 Orn/Lys/Arg decarboxylase, major domain AM408_RS15955 PF13520 Amino acid permease AM408_RS15965 PF10946 Protein of unknown function DUF2625 AM408_RS15975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM408_RS15975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM408_RS15975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM408_RS15975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM408_RS15980 PF03925 SeqA protein C-terminal domain AM408_RS15980 PF17206 SeqA protein N-terminal domain AM408_RS15985 PF12697 Alpha/beta hydrolase family AM408_RS15990 PF01402 Ribbon-helix-helix protein, copG family AM408_RS15995 PF00258 Flavodoxin AM408_RS16005 PF01475 Ferric uptake regulator family AM408_RS16010 PF13982 YbfN-like lipoprotein AM408_RS16015 PF03573 outer membrane porin, OprD family AM408_RS16020 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM408_RS16020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM408_RS16025 PF02378 Phosphotransferase system, EIIC AM408_RS16025 PF00367 phosphotransferase system, EIIB AM408_RS16025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM408_RS16030 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM408_RS16035 PF01979 Amidohydrolase family AM408_RS16040 PF01047 MarR family AM408_RS16040 PF00480 ROK family AM408_RS16045 PF13344 Haloacid dehalogenase-like hydrolase AM408_RS16055 PF00733 Asparagine synthase AM408_RS16055 PF13537 Glutamine amidotransferase domain AM408_RS16100 PF01494 FAD binding domain AM408_RS16105 PF00919 Uncharacterized protein family UPF0004 AM408_RS16105 PF01938 TRAM domain AM408_RS16105 PF04055 Radical SAM superfamily AM408_RS16110 PF02562 PhoH-like protein AM408_RS16115 PF02130 Uncharacterized protein family UPF0054 AM408_RS16120 PF03471 Transporter associated domain AM408_RS16120 PF00571 CBS domain AM408_RS16125 PF00795 Carbon-nitrogen hydrolase AM408_RS16130 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM408_RS16135 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS16140 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS16145 PF00005 ABC transporter AM408_RS16150 PF01156 Inosine-uridine preferring nucleoside hydrolase AM408_RS16155 PF00012 Hsp70 protein AM408_RS16165 PF06889 Protein of unknown function (DUF1266) AM408_RS16170 PF08238 Sel1 repeat AM408_RS16180 PF06889 Protein of unknown function (DUF1266) AM408_RS16185 PF08238 Sel1 repeat AM408_RS16190 PF07295 Zinc-ribbon containing domain AM408_RS16195 PF00133 tRNA synthetases class I (I, L, M and V) AM408_RS16195 PF13603 Leucyl-tRNA synthetase, Domain 2 AM408_RS16195 PF08264 Anticodon-binding domain of tRNA AM408_RS16200 PF04390 Lipopolysaccharide-assembly AM408_RS16205 PF06144 DNA polymerase III, delta subunit AM408_RS16205 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM408_RS16210 PF01467 Cytidylyltransferase-like AM408_RS16215 PF00300 Histidine phosphatase superfamily (branch 1) AM408_RS16225 PF02590 Predicted SPOUT methyltransferase AM408_RS16230 PF03717 Penicillin-binding Protein dimerisation domain AM408_RS16230 PF00905 Penicillin binding protein transpeptidase domain AM408_RS16235 PF01098 Cell cycle protein AM408_RS16240 PF05036 Sporulation related domain AM408_RS16240 PF03330 Lytic transglycolase AM408_RS16245 PF07943 Penicillin-binding protein 5, C-terminal domain AM408_RS16245 PF00768 D-alanyl-D-alanine carboxypeptidase AM408_RS16250 PF04359 Protein of unknown function (DUF493) AM408_RS16255 PF03099 Biotin/lipoate A/B protein ligase family AM408_RS16265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS16265 PF03466 LysR substrate binding domain AM408_RS16275 PF04055 Radical SAM superfamily AM408_RS16275 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM408_RS16280 PF02416 mttA/Hcf106 family AM408_RS16285 PF00795 Carbon-nitrogen hydrolase AM408_RS16295 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM408_RS16300 PF00313 'Cold-shock' DNA-binding domain AM408_RS16305 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM408_RS16315 PF03606 C4-dicarboxylate anaerobic carrier AM408_RS16320 PF00072 Response regulator receiver domain AM408_RS16320 PF12431 Transcriptional regulator AM408_RS16325 PF00989 PAS fold AM408_RS16325 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM408_RS16325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS16325 PF17203 Single cache domain 3 AM408_RS16330 PF08218 Citrate lyase ligase C-terminal domain AM408_RS16335 PF06857 Malonate decarboxylase delta subunit (MdcD) AM408_RS16340 PF03328 HpcH/HpaI aldolase/citrate lyase family AM408_RS16345 PF04223 Citrate lyase, alpha subunit (CitF) AM408_RS16350 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM408_RS16355 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM408_RS16360 PF00939 Sodium:sulfate symporter transmembrane region AM408_RS16365 PF00445 Ribonuclease T2 family AM408_RS16375 PF01272 Transcription elongation factor, GreA/GreB, C-term AM408_RS16375 PF14760 Rnk N-terminus AM408_RS16385 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS16385 PF13823 Alcohol dehydrogenase GroES-associated AM408_RS16385 PF00107 Zinc-binding dehydrogenase AM408_RS16390 PF00582 Universal stress protein family AM408_RS16395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS16395 PF13192 Thioredoxin domain AM408_RS16400 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM408_RS16400 PF00578 AhpC/TSA family AM408_RS16405 PF13098 Thioredoxin-like domain AM408_RS16415 PF03466 LysR substrate binding domain AM408_RS16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS16420 PF01507 Phosphoadenosine phosphosulfate reductase family AM408_RS16420 PF11922 Domain of unknown function (DUF3440) AM408_RS16425 PF02195 ParB-like nuclease domain AM408_RS16430 PF00155 Aminotransferase class I and II AM408_RS16435 PF00465 Iron-containing alcohol dehydrogenase AM408_RS16440 PF04328 Selenoprotein, putative AM408_RS16445 PF02554 Carbon starvation protein CstA AM408_RS16445 PF13722 5TM C-terminal transporter carbon starvation CstA AM408_RS16450 PF03061 Thioesterase superfamily AM408_RS16460 PF00550 Phosphopantetheine attachment site AM408_RS16460 PF00857 Isochorismatase family AM408_RS16465 PF13193 AMP-binding enzyme C-terminal domain AM408_RS16465 PF00501 AMP-binding enzyme AM408_RS16470 PF00425 chorismate binding enzyme AM408_RS16480 PF01497 Periplasmic binding protein AM408_RS16485 PF05977 Transmembrane secretion effector AM408_RS16490 PF01032 FecCD transport family AM408_RS16495 PF01032 FecCD transport family AM408_RS16500 PF00005 ABC transporter AM408_RS16505 PF02706 Chain length determinant protein AM408_RS16510 PF13193 AMP-binding enzyme C-terminal domain AM408_RS16510 PF00668 Condensation domain AM408_RS16510 PF00501 AMP-binding enzyme AM408_RS16510 PF00975 Thioesterase domain AM408_RS16510 PF00550 Phosphopantetheine attachment site AM408_RS16515 PF03621 MbtH-like protein AM408_RS16520 PF00756 Putative esterase AM408_RS16520 PF11806 Domain of unknown function (DUF3327) AM408_RS16525 PF00593 TonB dependent receptor AM408_RS16525 PF07715 TonB-dependent Receptor Plug Domain AM408_RS16530 PF01648 4'-phosphopantetheinyl transferase superfamily AM408_RS16530 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM408_RS16535 PF01609 Transposase DDE domain AM408_RS16540 PF01848 Hok/gef family AM408_RS16560 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM408_RS16565 PF13610 DDE domain AM408_RS16585 PF13693 Winged helix-turn-helix DNA-binding AM408_RS16595 PF13737 Transposase DDE domain AM408_RS16600 PF00534 Glycosyl transferases group 1 AM408_RS16605 PF08003 Protein of unknown function (DUF1698) AM408_RS16610 PF00534 Glycosyl transferases group 1 AM408_RS16610 PF13477 Glycosyl transferase 4-like AM408_RS16615 PF00534 Glycosyl transferases group 1 AM408_RS16620 PF00005 ABC transporter AM408_RS16625 PF01061 ABC-2 type transporter AM408_RS16635 PF16363 GDP-mannose 4,6 dehydratase AM408_RS16640 PF00483 Nucleotidyl transferase AM408_RS16655 PF13610 DDE domain AM408_RS16665 PF00881 Nitroreductase family AM408_RS16670 PF00924 Mechanosensitive ion channel AM408_RS16675 PF00324 Amino acid permease AM408_RS16680 PF00873 AcrB/AcrD/AcrF family AM408_RS16685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS16685 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS16690 PF11604 Copper binding periplasmic protein CusF AM408_RS16695 PF02321 Outer membrane efflux protein AM408_RS16705 PF00486 Transcriptional regulatory protein, C terminal AM408_RS16705 PF00072 Response regulator receiver domain AM408_RS16710 PF00672 HAMP domain AM408_RS16710 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS16715 PF13632 Glycosyl transferase family group 2 AM408_RS16715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM408_RS16720 PF13283 Bacteriophage N adsorption protein A C-term AM408_RS16725 PF14488 Domain of unknown function (DUF4434) AM408_RS16735 PF12833 Helix-turn-helix domain AM408_RS16750 PF00072 Response regulator receiver domain AM408_RS16750 PF00196 Bacterial regulatory proteins, luxR family AM408_RS16755 PF00419 Fimbrial protein AM408_RS16760 PF00419 Fimbrial protein AM408_RS16765 PF00577 Outer membrane usher protein AM408_RS16765 PF13954 PapC N-terminal domain AM408_RS16765 PF13953 PapC C-terminal domain AM408_RS16770 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS16770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS16775 PF00419 Fimbrial protein AM408_RS16780 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM408_RS16780 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM408_RS16790 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM408_RS16795 PF09190 DALR domain AM408_RS16795 PF01406 tRNA synthetases class I (C) catalytic domain AM408_RS16800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM408_RS16805 PF12850 Calcineurin-like phosphoesterase superfamily domain AM408_RS16815 PF00731 AIR carboxylase AM408_RS16820 PF02222 ATP-grasp domain AM408_RS16820 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM408_RS16825 PF00696 Amino acid kinase family AM408_RS16830 PF11392 Protein of unknown function (DUF2877) AM408_RS16835 PF06545 Protein of unknown function (DUF1116) AM408_RS16840 PF00549 CoA-ligase AM408_RS16840 PF02629 CoA binding domain AM408_RS16845 PF02615 Malate/L-lactate dehydrogenase AM408_RS16850 PF01546 Peptidase family M20/M25/M40 AM408_RS16855 PF05899 Protein of unknown function (DUF861) AM408_RS16855 PF07883 Cupin domain AM408_RS16860 PF02595 Glycerate kinase family AM408_RS16865 PF00860 Permease family AM408_RS16870 PF01979 Amidohydrolase family AM408_RS16875 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM408_RS16880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM408_RS16880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM408_RS16890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM408_RS16890 PF00205 Thiamine pyrophosphate enzyme, central domain AM408_RS16890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS16895 PF09339 IclR helix-turn-helix domain AM408_RS16895 PF01614 Bacterial transcriptional regulator AM408_RS16900 PF04115 Ureidoglycolate lyase AM408_RS16905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS16905 PF03466 LysR substrate binding domain AM408_RS16925 PF03527 RHS protein AM408_RS16930 PF15631 NTF2 fold immunity protein AM408_RS16945 PF00005 ABC transporter AM408_RS16950 PF13472 GDSL-like Lipase/Acylhydrolase family AM408_RS16955 PF00106 short chain dehydrogenase AM408_RS16960 PF00085 Thioredoxin AM408_RS16965 PF03649 Uncharacterised protein family (UPF0014) AM408_RS16970 PF00005 ABC transporter AM408_RS16975 PF01145 SPFH domain / Band 7 family AM408_RS16975 PF16200 C-terminal region of band_7 AM408_RS16980 PF01957 NfeD-like C-terminal, partner-binding AM408_RS16985 PF13411 MerR HTH family regulatory protein AM408_RS16995 PF13520 Amino acid permease AM408_RS17000 PF04960 Glutaminase AM408_RS17005 PF00403 Heavy-metal-associated domain AM408_RS17010 PF01381 Helix-turn-helix AM408_RS17015 PF01963 TraB family AM408_RS17025 PF04073 Aminoacyl-tRNA editing domain AM408_RS17030 PF00149 Calcineurin-like phosphoesterase AM408_RS17030 PF02872 5'-nucleotidase, C-terminal domain AM408_RS17040 PF07690 Major Facilitator Superfamily AM408_RS17045 PF02254 TrkA-N domain AM408_RS17045 PF00999 Sodium/hydrogen exchanger family AM408_RS17050 PF00294 pfkB family carbohydrate kinase AM408_RS17055 PF07859 alpha/beta hydrolase fold AM408_RS17060 PF00762 Ferrochelatase AM408_RS17065 PF05191 Adenylate kinase, active site lid AM408_RS17075 PF00183 Hsp90 protein AM408_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS17080 PF02132 RecR protein AM408_RS17080 PF13662 Toprim domain AM408_RS17085 PF02575 YbaB/EbfC DNA-binding family AM408_RS17090 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM408_RS17090 PF12170 DNA polymerase III tau subunit V interacting with alpha AM408_RS17090 PF12169 DNA polymerase III subunits gamma and tau domain III AM408_RS17095 PF00156 Phosphoribosyl transferase domain AM408_RS17105 PF04304 Protein of unknown function (DUF454) AM408_RS17110 PF07445 Primosomal replication protein priC AM408_RS17115 PF10689 Protein of unknown function (DUF2496) AM408_RS17120 PF12795 Mechanosensitive ion channel porin domain AM408_RS17120 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM408_RS17120 PF00924 Mechanosensitive ion channel AM408_RS17135 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS17135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS17140 PF00873 AcrB/AcrD/AcrF family AM408_RS17145 PF10757 Biofilm formation regulator YbaJ AM408_RS17150 PF05321 Haemolysin expression modulating protein AM408_RS17155 PF14602 Hexapeptide repeat of succinyl-transferase AM408_RS17155 PF12464 Maltose acetyltransferase AM408_RS17160 PF10777 Inner membrane protein YlaC AM408_RS17165 PF00563 EAL domain AM408_RS17165 PF12792 CSS motif domain associated with EAL AM408_RS17170 PF07237 Protein of unknown function (DUF1428) AM408_RS17180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM408_RS17185 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM408_RS17195 PF00909 Ammonium Transporter Family AM408_RS17200 PF00543 Nitrogen regulatory protein P-II AM408_RS17205 PF00664 ABC transporter transmembrane region AM408_RS17205 PF00005 ABC transporter AM408_RS17210 PF00005 ABC transporter AM408_RS17210 PF00664 ABC transporter transmembrane region AM408_RS17215 PF01037 Lrp/AsnC ligand binding domain AM408_RS17215 PF13404 AsnC-type helix-turn-helix domain AM408_RS17225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS17225 PF12793 Sugar transport-related sRNA regulator N-term AM408_RS17230 PF06508 Queuosine biosynthesis protein QueC AM408_RS17245 PF13145 PPIC-type PPIASE domain AM408_RS17250 PF00216 Bacterial DNA-binding protein AM408_RS17255 PF05362 Lon protease (S16) C-terminal proteolytic domain AM408_RS17255 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM408_RS17255 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS17260 PF06689 ClpX C4-type zinc finger AM408_RS17260 PF10431 C-terminal, D2-small domain, of ClpB protein AM408_RS17260 PF07724 AAA domain (Cdc48 subfamily) AM408_RS17265 PF00574 Clp protease AM408_RS17270 PF05697 Bacterial trigger factor protein (TF) AM408_RS17270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM408_RS17270 PF05698 Bacterial trigger factor protein (TF) C-terminus AM408_RS17280 PF01722 BolA-like protein AM408_RS17290 PF03923 Uncharacterized lipoprotein AM408_RS17290 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM408_RS17295 PF07690 Major Facilitator Superfamily AM408_RS17300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM408_RS17300 PF06481 COX Aromatic Rich Motif AM408_RS17305 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM408_RS17310 PF00510 Cytochrome c oxidase subunit III AM408_RS17315 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM408_RS17320 PF01040 UbiA prenyltransferase family AM408_RS17325 PF07690 Major Facilitator Superfamily AM408_RS17330 PF04461 Protein of unknown function (DUF520) AM408_RS17335 PF02558 Ketopantoate reductase PanE/ApbA AM408_RS17335 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM408_RS17340 PF01965 DJ-1/PfpI family AM408_RS17345 PF02568 Thiamine biosynthesis protein (ThiI) AM408_RS17345 PF02926 THUMP domain AM408_RS17350 PF02609 Exonuclease VII small subunit AM408_RS17355 PF00348 Polyprenyl synthetase AM408_RS17360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM408_RS17360 PF02779 Transketolase, pyrimidine binding domain AM408_RS17360 PF02780 Transketolase, C-terminal domain AM408_RS17365 PF00248 Aldo/keto reductase family AM408_RS17370 PF04608 Phosphatidylglycerophosphatase A AM408_RS17375 PF00586 AIR synthase related protein, N-terminal domain AM408_RS17375 PF02769 AIR synthase related protein, C-terminal domain AM408_RS17380 PF01029 NusB family AM408_RS17385 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM408_RS17390 PF01872 RibD C-terminal domain AM408_RS17390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM408_RS17395 PF03477 ATP cone domain AM408_RS17400 PF11622 Protein of unknown function (DUF3251) AM408_RS17405 PF03502 Nucleoside-specific channel-forming protein, Tsx AM408_RS17410 PF01844 HNH endonuclease AM408_RS17415 PF07549 SecD/SecF GG Motif AM408_RS17415 PF02355 Protein export membrane protein AM408_RS17420 PF02355 Protein export membrane protein AM408_RS17420 PF13721 SecD export protein N-terminal TM region AM408_RS17420 PF07549 SecD/SecF GG Motif AM408_RS17425 PF02699 Preprotein translocase subunit AM408_RS17430 PF01702 Queuine tRNA-ribosyltransferase AM408_RS17435 PF02547 Queuosine biosynthesis protein AM408_RS17440 PF04336 Acyl carrier protein phosphodiesterase AM408_RS17445 PF02903 Alpha amylase, N-terminal ig-like domain AM408_RS17445 PF00128 Alpha amylase, catalytic domain AM408_RS17450 PF00324 Amino acid permease AM408_RS17455 PF05525 Branched-chain amino acid transport protein AM408_RS17460 PF11808 Phosphate regulon sensor protein PhoR AM408_RS17460 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS17460 PF00989 PAS fold AM408_RS17465 PF00486 Transcriptional regulatory protein, C terminal AM408_RS17465 PF00072 Response regulator receiver domain AM408_RS17470 PF12320 Type 5 capsule protein repressor C-terminal domain AM408_RS17470 PF00149 Calcineurin-like phosphoesterase AM408_RS17475 PF13476 AAA domain AM408_RS17480 PF07690 Major Facilitator Superfamily AM408_RS17485 PF00480 ROK family AM408_RS17490 PF04381 Putative exonuclease, RdgC AM408_RS17495 PF10971 Protein of unknown function (DUF2773) AM408_RS17505 PF06865 Pyrimidine/purine nucleoside phosphorylase AM408_RS17510 PF07302 AroM protein AM408_RS17520 PF16362 YaiA protein AM408_RS17525 PF01202 Shikimate kinase AM408_RS17530 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM408_RS17535 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM408_RS17535 PF03807 NADP oxidoreductase coenzyme F420-dependent AM408_RS17540 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS17540 PF05230 MASE2 domain AM408_RS17545 PF07769 psiF repeat AM408_RS17550 PF00245 Alkaline phosphatase AM408_RS17555 PF10796 Sigma-S stabilisation anti-adaptor protein AM408_RS17565 PF07478 D-ala D-ala ligase C-terminus AM408_RS17565 PF01820 D-ala D-ala ligase N-terminus AM408_RS17570 PF10953 Protein of unknown function (DUF2754) AM408_RS17575 PF10954 Protein of unknown function (DUF2755) AM408_RS17580 PF07759 Protein of unknown function (DUF1615) AM408_RS17585 PF05992 SbmA/BacA-like family AM408_RS17595 PF00144 Beta-lactamase AM408_RS17600 PF15977 Winged helix-turn-helix DNA binding AM408_RS17605 PF03212 Pertactin AM408_RS17605 PF03797 Autotransporter beta-domain AM408_RS17615 PF00490 Delta-aminolevulinic acid dehydratase AM408_RS17620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM408_RS17625 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS17630 PF00005 ABC transporter AM408_RS17635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM408_RS17655 PF02585 GlcNAc-PI de-N-acetylase AM408_RS17660 PF00535 Glycosyl transferase family 2 AM408_RS17665 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS17675 PF02371 Transposase IS116/IS110/IS902 family AM408_RS17675 PF01548 Transposase AM408_RS17680 PF02583 Metal-sensitive transcriptional repressor AM408_RS17685 PF00107 Zinc-binding dehydrogenase AM408_RS17685 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS17690 PF00756 Putative esterase AM408_RS17695 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM408_RS17700 PF07690 Major Facilitator Superfamily AM408_RS17705 PF07836 DmpG-like communication domain AM408_RS17705 PF00682 HMGL-like AM408_RS17710 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM408_RS17710 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AM408_RS17715 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM408_RS17720 PF12697 Alpha/beta hydrolase family AM408_RS17725 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM408_RS17730 PF01494 FAD binding domain AM408_RS17735 PF09339 IclR helix-turn-helix domain AM408_RS17735 PF01614 Bacterial transcriptional regulator AM408_RS17740 PF00356 Bacterial regulatory proteins, lacI family AM408_RS17750 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM408_RS17750 PF02929 Beta galactosidase small chain AM408_RS17750 PF00703 Glycosyl hydrolases family 2 AM408_RS17750 PF16353 Domain of unknown function(DUF4981) AM408_RS17750 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM408_RS17755 PF01306 LacY proton/sugar symporter AM408_RS17760 PF12464 Maltose acetyltransferase AM408_RS17760 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS17765 PF07690 Major Facilitator Superfamily AM408_RS17770 PF02560 Cyanate lyase C-terminal domain AM408_RS17775 PF00484 Carbonic anhydrase AM408_RS17780 PF03466 LysR substrate binding domain AM408_RS17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS17785 PF07969 Amidohydrolase family AM408_RS17790 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM408_RS17795 PF13193 AMP-binding enzyme C-terminal domain AM408_RS17795 PF00501 AMP-binding enzyme AM408_RS17795 PF16177 Acetyl-coenzyme A synthetase N-terminus AM408_RS17800 PF03972 MmgE/PrpD family AM408_RS17805 PF00285 Citrate synthase, C-terminal domain AM408_RS17815 PF02954 Bacterial regulatory protein, Fis family AM408_RS17815 PF06506 Propionate catabolism activator AM408_RS17815 PF00158 Sigma-54 interaction domain AM408_RS17820 PF07338 Protein of unknown function (DUF1471) AM408_RS17825 PF01810 LysE type translocator AM408_RS17840 PF00107 Zinc-binding dehydrogenase AM408_RS17840 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS17845 PF07969 Amidohydrolase family AM408_RS17850 PF00696 Amino acid kinase family AM408_RS17860 PF06545 Protein of unknown function (DUF1116) AM408_RS17865 PF02629 CoA binding domain AM408_RS17865 PF00549 CoA-ligase AM408_RS17870 PF11392 Protein of unknown function (DUF2877) AM408_RS17875 PF12796 Ankyrin repeats (3 copies) AM408_RS17885 PF06496 Protein of unknown function (DUF1097) AM408_RS17890 PF03466 LysR substrate binding domain AM408_RS17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS17895 PF00196 Bacterial regulatory proteins, luxR family AM408_RS17895 PF00563 EAL domain AM408_RS17910 PF02028 BCCT, betaine/carnitine/choline family transporter AM408_RS17920 PF00440 Bacterial regulatory proteins, tetR family AM408_RS17920 PF13977 BetI-type transcriptional repressor, C-terminal AM408_RS17925 PF00171 Aldehyde dehydrogenase family AM408_RS17930 PF00732 GMC oxidoreductase AM408_RS17930 PF05199 GMC oxidoreductase AM408_RS17950 PF02589 LUD domain AM408_RS17955 PF11870 Domain of unknown function (DUF3390) AM408_RS17955 PF02589 LUD domain AM408_RS17955 PF13183 4Fe-4S dicluster domain AM408_RS17960 PF02754 Cysteine-rich domain AM408_RS17965 PF12852 Cupin AM408_RS17965 PF12833 Helix-turn-helix domain AM408_RS17970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM408_RS17970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS17975 PF07338 Protein of unknown function (DUF1471) AM408_RS17980 PF04224 Protein of unknown function, DUF417 AM408_RS17985 PF12833 Helix-turn-helix domain AM408_RS17990 PF11924 Inverse autotransporter, beta-domain AM408_RS18010 PF01197 Ribosomal protein L31 AM408_RS18015 PF00444 Ribosomal protein L36 AM408_RS18030 PF00196 Bacterial regulatory proteins, luxR family AM408_RS18035 PF16449 Fimbrillin MatB AM408_RS18040 PF18649 EcpB C-terminal domain AM408_RS18045 PF16967 E-set like domain AM408_RS18045 PF15976 CS1-pili formation C-terminal AM408_RS18060 PF03692 Putative zinc- or iron-chelating domain AM408_RS18070 PF07274 Protein of unknown function (DUF1440) AM408_RS18080 PF00111 2Fe-2S iron-sulfur cluster binding domain AM408_RS18080 PF01799 [2Fe-2S] binding domain AM408_RS18085 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM408_RS18085 PF00941 FAD binding domain in molybdopterin dehydrogenase AM408_RS18090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM408_RS18090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM408_RS18095 PF13478 XdhC Rossmann domain AM408_RS18095 PF02625 XdhC and CoxI family AM408_RS18100 PF03466 LysR substrate binding domain AM408_RS18105 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM408_RS18110 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM408_RS18120 PF06174 Protein of unknown function (DUF987) AM408_RS18125 PF04002 RadC-like JAB domain AM408_RS18130 PF03230 Antirestriction protein AM408_RS18140 PF06067 Domain of unknown function (DUF932) AM408_RS18205 PF00665 Integrase core domain AM408_RS18245 PF05321 Haemolysin expression modulating protein AM408_RS18290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS18295 PF00665 Integrase core domain AM408_RS18295 PF13276 HTH-like domain AM408_RS18295 PF13333 Integrase core domain AM408_RS18310 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM408_RS18320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS18320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS18325 PF04198 Putative sugar-binding domain AM408_RS18330 PF00005 ABC transporter AM408_RS18335 PF02653 Branched-chain amino acid transport system / permease component AM408_RS18340 PF02653 Branched-chain amino acid transport system / permease component AM408_RS18345 PF13407 Periplasmic binding protein domain AM408_RS18350 PF01791 DeoC/LacD family aldolase AM408_RS18355 PF03992 Antibiotic biosynthesis monooxygenase AM408_RS18360 PF00834 Ribulose-phosphate 3 epimerase family AM408_RS18370 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM408_RS18425 PF00589 Phage integrase family AM408_RS18425 PF13356 Arm DNA-binding domain AM408_RS18425 PF14659 Phage integrase, N-terminal SAM-like domain AM408_RS18465 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM408_RS18470 PF08400 Prophage tail fibre N-terminal AM408_RS18470 PF03335 Phage tail fibre repeat AM408_RS18470 PF07484 Phage Tail Collar Domain AM408_RS18475 PF06316 Enterobacterial Ail/Lom protein AM408_RS18545 PF00574 Clp protease AM408_RS18580 PF03245 Bacteriophage Rz lysis protein AM408_RS18585 PF00959 Phage lysozyme AM408_RS18590 PF04971 Bacteriophage P21 holin S AM408_RS18595 PF01555 DNA methylase AM408_RS18615 PF06530 Phage antitermination protein Q AM408_RS18620 PF06147 Protein of unknown function (DUF968) AM408_RS18630 PF05866 Endodeoxyribonuclease RusA AM408_RS18635 PF00717 Peptidase S24-like AM408_RS18635 PF01726 LexA DNA binding domain AM408_RS18640 PF05869 DNA N-6-adenine-methyltransferase (Dam) AM408_RS18645 PF06069 PerC transcriptional activator AM408_RS18695 PF10065 Uncharacterized conserved protein (DUF2303) AM408_RS18720 PF00589 Phage integrase family AM408_RS18730 PF00171 Aldehyde dehydrogenase family AM408_RS18735 PF01472 PUA domain AM408_RS18735 PF00696 Amino acid kinase family AM408_RS18740 PF00267 Gram-negative porin AM408_RS18745 PF07417 Sigma factor-binding transcriptional regulator Crl AM408_RS18750 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM408_RS18755 PF00156 Phosphoribosyl transferase domain AM408_RS18760 PF07687 Peptidase dimerisation domain AM408_RS18760 PF01546 Peptidase family M20/M25/M40 AM408_RS18765 PF00472 RF-1 domain AM408_RS18780 PF13673 Acetyltransferase (GNAT) domain AM408_RS18785 PF13957 Toxin YafO, type II toxin-antitoxin system AM408_RS18795 PF00817 impB/mucB/samB family AM408_RS18795 PF11799 impB/mucB/samB family C-terminal domain AM408_RS18795 PF11798 IMS family HHH motif AM408_RS18800 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM408_RS18800 PF00691 OmpA family AM408_RS18805 PF00771 FHIPEP family AM408_RS18815 PF00877 NlpC/P60 family AM408_RS18820 PF04221 RelB antitoxin AM408_RS18825 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AM408_RS18830 PF03734 L,D-transpeptidase catalytic domain AM408_RS18835 PF13230 Glutamine amidotransferases class-II AM408_RS18840 PF13580 SIS domain AM408_RS18845 PF02770 Acyl-CoA dehydrogenase, middle domain AM408_RS18845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM408_RS18845 PF09317 Domain of unknown function (DUF1974) AM408_RS18845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM408_RS18855 PF00795 Carbon-nitrogen hydrolase AM408_RS18860 PF01609 Transposase DDE domain AM408_RS18860 PF13808 DDE_Tnp_1-associated AM408_RS18870 PF14220 Domain of unknown function (DUF4329) AM408_RS18870 PF05593 RHS Repeat AM408_RS18870 PF03527 RHS protein AM408_RS18875 PF04717 Type VI secretion system, phage-baseplate injector AM408_RS18885 PF05638 Type VI secretion system effector, Hcp AM408_RS18900 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM408_RS18910 PF05947 Type VI secretion system, TssF AM408_RS18930 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM408_RS18940 PF17871 AAA lid domain AM408_RS18940 PF10431 C-terminal, D2-small domain, of ClpB protein AM408_RS18940 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS18940 PF07724 AAA domain (Cdc48 subfamily) AM408_RS18955 PF06744 Type VI secretion protein IcmF C-terminal AM408_RS18955 PF06761 Intracellular multiplication and human macrophage-killing AM408_RS18955 PF14331 ImcF-related N-terminal domain AM408_RS18965 PF05638 Type VI secretion system effector, Hcp AM408_RS18990 PF00929 Exonuclease AM408_RS18995 PF00075 RNase H AM408_RS19000 PF08241 Methyltransferase domain AM408_RS19005 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM408_RS19005 PF00753 Metallo-beta-lactamase superfamily AM408_RS19010 PF01464 Transglycosylase SLT domain AM408_RS19010 PF01476 LysM domain AM408_RS19015 PF08241 Methyltransferase domain AM408_RS19020 PF03372 Endonuclease/Exonuclease/phosphatase family AM408_RS19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS19025 PF03466 LysR substrate binding domain AM408_RS19030 PF00248 Aldo/keto reductase family AM408_RS19070 PF00005 ABC transporter AM408_RS19070 PF09383 NIL domain AM408_RS19075 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS19080 PF03180 NLPA lipoprotein AM408_RS19085 PF16358 RcsF lipoprotein AM408_RS19090 PF18389 TrmO C-terminal domain AM408_RS19090 PF01980 tRNA-methyltransferase O AM408_RS19095 PF03129 Anticodon binding domain AM408_RS19095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM408_RS19095 PF04073 Aminoacyl-tRNA editing domain AM408_RS19100 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM408_RS19105 PF04170 NlpE N-terminal domain AM408_RS19105 PF17185 NlpE C-terminal OB domain AM408_RS19110 PF00472 RF-1 domain AM408_RS19115 PF07152 YaeQ protein AM408_RS19120 PF06786 Uncharacterised protein family (UPF0253) AM408_RS19125 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM408_RS19130 PF09179 TilS substrate binding domain AM408_RS19130 PF01171 PP-loop family AM408_RS19130 PF11734 TilS substrate C-terminal domain AM408_RS19135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM408_RS19140 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM408_RS19140 PF01276 Orn/Lys/Arg decarboxylase, major domain AM408_RS19140 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM408_RS19145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM408_RS19150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM408_RS19150 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM408_RS19150 PF01336 OB-fold nucleic acid binding domain AM408_RS19150 PF02811 PHP domain AM408_RS19150 PF14579 Helix-hairpin-helix motif AM408_RS19155 PF01351 Ribonuclease HII AM408_RS19160 PF02684 Lipid-A-disaccharide synthetase AM408_RS19165 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS19165 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM408_RS19170 PF07977 FabA-like domain AM408_RS19175 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM408_RS19175 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS19180 PF03938 Outer membrane protein (OmpH-like) AM408_RS19185 PF07244 Surface antigen variable number repeat AM408_RS19185 PF01103 Surface antigen AM408_RS19190 PF17820 PDZ domain AM408_RS19190 PF02163 Peptidase family M50 AM408_RS19200 PF01255 Putative undecaprenyl diphosphate synthase AM408_RS19205 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM408_RS19205 PF13288 DXP reductoisomerase C-terminal domain AM408_RS19205 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM408_RS19210 PF01765 Ribosome recycling factor AM408_RS19215 PF00696 Amino acid kinase family AM408_RS19220 PF00889 Elongation factor TS AM408_RS19230 PF00318 Ribosomal protein S2 AM408_RS19240 PF00557 Metallopeptidase family M24 AM408_RS19245 PF01966 HD domain AM408_RS19245 PF08335 GlnD PII-uridylyltransferase AM408_RS19245 PF01842 ACT domain AM408_RS19245 PF01909 Nucleotidyltransferase domain AM408_RS19250 PF14602 Hexapeptide repeat of succinyl-transferase AM408_RS19250 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM408_RS19250 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS19255 PF00149 Calcineurin-like phosphoesterase AM408_RS19260 PF11944 Protein of unknown function (DUF3461) AM408_RS19265 PF13556 PucR C-terminal helix-turn-helix domain AM408_RS19265 PF05651 Putative sugar diacid recognition AM408_RS19265 PF17853 GGDEF-like domain AM408_RS19270 PF00595 PDZ domain AM408_RS19280 PF01966 HD domain AM408_RS19280 PF13286 Phosphohydrolase-associated domain AM408_RS19285 PF01048 Phosphorylase superfamily AM408_RS19290 PF01497 Periplasmic binding protein AM408_RS19295 PF03458 UPF0126 domain AM408_RS19300 PF01521 Iron-sulphur cluster biosynthesis AM408_RS19305 PF00654 Voltage gated chloride channel AM408_RS19310 PF00202 Aminotransferase class-III AM408_RS19315 PF01032 FecCD transport family AM408_RS19320 PF01497 Periplasmic binding protein AM408_RS19325 PF00005 ABC transporter AM408_RS19330 PF07715 TonB-dependent Receptor Plug Domain AM408_RS19330 PF00593 TonB dependent receptor AM408_RS19335 PF00905 Penicillin binding protein transpeptidase domain AM408_RS19335 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM408_RS19335 PF14814 Bifunctional transglycosylase second domain AM408_RS19335 PF00912 Transglycosylase AM408_RS19345 PF04408 Helicase associated domain (HA2) AM408_RS19345 PF00271 Helicase conserved C-terminal domain AM408_RS19345 PF08482 ATP-dependent helicase C-terminal AM408_RS19345 PF00270 DEAD/DEAH box helicase AM408_RS19350 PF02834 LigT like Phosphoesterase AM408_RS19355 PF03749 Sugar fermentation stimulation protein RE domain AM408_RS19355 PF17746 SfsA N-terminal OB domain AM408_RS19360 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM408_RS19365 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM408_RS19370 PF01743 Poly A polymerase head domain AM408_RS19370 PF12627 Probable RNA and SrmB- binding site of polymerase A AM408_RS19370 PF12626 Polymerase A arginine-rich C-terminus AM408_RS19375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM408_RS19380 PF00419 Fimbrial protein AM408_RS19385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM408_RS19385 PF02753 Pili assembly chaperone PapD, C-terminal domain AM408_RS19390 PF13954 PapC N-terminal domain AM408_RS19390 PF00577 Outer membrane usher protein AM408_RS19390 PF13953 PapC C-terminal domain AM408_RS19395 PF00419 Fimbrial protein AM408_RS19400 PF00419 Fimbrial protein AM408_RS19405 PF00419 Fimbrial protein AM408_RS19410 PF00419 Fimbrial protein AM408_RS19415 PF02548 Ketopantoate hydroxymethyltransferase AM408_RS19420 PF02569 Pantoate-beta-alanine ligase AM408_RS19425 PF04754 Putative transposase, YhgA-like AM408_RS19440 PF02261 Aspartate decarboxylase AM408_RS19445 PF01522 Polysaccharide deacetylase AM408_RS19450 PF03610 PTS system fructose IIA component AM408_RS19455 PF01061 ABC-2 type transporter AM408_RS19460 PF00005 ABC transporter AM408_RS19465 PF00484 Carbonic anhydrase AM408_RS19470 PF00156 Phosphoribosyl transferase domain AM408_RS19475 PF01011 PQQ enzyme repeat AM408_RS19480 PF07732 Multicopper oxidase AM408_RS19480 PF00394 Multicopper oxidase AM408_RS19480 PF07731 Multicopper oxidase AM408_RS19485 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM408_RS19490 PF17284 Spermidine synthase tetramerisation domain AM408_RS19495 PF02675 S-adenosylmethionine decarboxylase AM408_RS19500 PF06062 Uncharacterised protein family (UPF0231) AM408_RS19505 PF06434 Aconitate hydratase 2 N-terminus AM408_RS19505 PF00330 Aconitase family (aconitate hydratase) AM408_RS19505 PF11791 Aconitate B N-terminal domain AM408_RS19515 PF11737 Protein of unknown function (DUF3300) AM408_RS19520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM408_RS19520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS19525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM408_RS19525 PF02817 e3 binding domain AM408_RS19525 PF00364 Biotin-requiring enzyme AM408_RS19530 PF17831 Pyruvate dehydrogenase E1 component middle domain AM408_RS19530 PF00456 Transketolase, thiamine diphosphate binding domain AM408_RS19540 PF07729 FCD domain AM408_RS19540 PF00392 Bacterial regulatory proteins, gntR family AM408_RS19545 PF00324 Amino acid permease AM408_RS19550 PF17113 Regulatory signalling modulator protein AmpE AM408_RS19555 PF01510 N-acetylmuramoyl-L-alanine amidase AM408_RS19560 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM408_RS19560 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM408_RS19570 PF07963 Prokaryotic N-terminal methylation motif AM408_RS19575 PF00437 Type II/IV secretion system protein AM408_RS19575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM408_RS19580 PF00482 Type II secretion system (T2SS), protein F AM408_RS19585 PF00478 IMP dehydrogenase / GMP reductase domain AM408_RS19590 PF01121 Dephospho-CoA kinase AM408_RS19595 PF07072 Cell division protein AM408_RS19600 PF03884 DNA gyrase inhibitor YacG AM408_RS19605 PF00293 NUDIX domain AM408_RS19610 PF07517 SecA DEAD-like domain AM408_RS19610 PF01043 SecA preprotein cross-linking domain AM408_RS19610 PF07516 SecA Wing and Scaffold domain AM408_RS19610 PF02810 SEC-C motif AM408_RS19615 PF06558 Secretion monitor precursor protein (SecM) AM408_RS19620 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM408_RS19625 PF12327 FtsZ family, C-terminal domain AM408_RS19625 PF00091 Tubulin/FtsZ family, GTPase domain AM408_RS19630 PF02491 SHS2 domain inserted in FTSA AM408_RS19635 PF08478 POTRA domain, FtsQ-type AM408_RS19635 PF03799 Cell division protein FtsQ AM408_RS19640 PF01820 D-ala D-ala ligase N-terminus AM408_RS19640 PF07478 D-ala D-ala ligase C-terminus AM408_RS19645 PF08245 Mur ligase middle domain AM408_RS19645 PF02875 Mur ligase family, glutamate ligase domain AM408_RS19645 PF01225 Mur ligase family, catalytic domain AM408_RS19650 PF03033 Glycosyltransferase family 28 N-terminal domain AM408_RS19650 PF04101 Glycosyltransferase family 28 C-terminal domain AM408_RS19655 PF01098 Cell cycle protein AM408_RS19660 PF08245 Mur ligase middle domain AM408_RS19660 PF02875 Mur ligase family, glutamate ligase domain AM408_RS19665 PF00953 Glycosyl transferase family 4 AM408_RS19665 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM408_RS19670 PF02875 Mur ligase family, glutamate ligase domain AM408_RS19670 PF01225 Mur ligase family, catalytic domain AM408_RS19670 PF08245 Mur ligase middle domain AM408_RS19675 PF08245 Mur ligase middle domain AM408_RS19675 PF02875 Mur ligase family, glutamate ligase domain AM408_RS19675 PF01225 Mur ligase family, catalytic domain AM408_RS19680 PF00905 Penicillin binding protein transpeptidase domain AM408_RS19680 PF03717 Penicillin-binding Protein dimerisation domain AM408_RS19685 PF04999 Cell division protein FtsL AM408_RS19690 PF01795 MraW methylase family AM408_RS19695 PF02381 MraZ protein, putative antitoxin-like AM408_RS19705 PF00356 Bacterial regulatory proteins, lacI family AM408_RS19705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM408_RS19715 PF10369 Small subunit of acetolactate synthase AM408_RS19720 PF00205 Thiamine pyrophosphate enzyme, central domain AM408_RS19720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS19720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM408_RS19725 PF03466 LysR substrate binding domain AM408_RS19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS19730 PF08054 Leucine operon leader peptide AM408_RS19735 PF00682 HMGL-like AM408_RS19735 PF08502 LeuA allosteric (dimerisation) domain AM408_RS19740 PF00180 Isocitrate/isopropylmalate dehydrogenase AM408_RS19745 PF00330 Aconitase family (aconitate hydratase) AM408_RS19750 PF00694 Aconitase C-terminal domain AM408_RS19755 PF07690 Major Facilitator Superfamily AM408_RS19765 PF12793 Sugar transport-related sRNA regulator N-term AM408_RS19765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS19775 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS19780 PF00005 ABC transporter AM408_RS19785 PF09335 SNARE associated Golgi protein AM408_RS19790 PF12833 Helix-turn-helix domain AM408_RS19790 PF02311 AraC-like ligand binding domain AM408_RS19800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS19805 PF02610 L-arabinose isomerase AM408_RS19805 PF11762 L-arabinose isomerase C-terminal domain AM408_RS19810 PF00596 Class II Aldolase and Adducin N-terminal domain AM408_RS19815 PF00136 DNA polymerase family B AM408_RS19815 PF03104 DNA polymerase family B, exonuclease domain AM408_RS19820 PF12137 RNA polymerase recycling family C-terminal AM408_RS19820 PF18339 RapA N-terminal Tudor like domain 1 AM408_RS19820 PF18337 RapA N-terminal Tudor like domain AM408_RS19820 PF00176 SNF2 family N-terminal domain AM408_RS19820 PF00271 Helicase conserved C-terminal domain AM408_RS19825 PF00849 RNA pseudouridylate synthase AM408_RS19835 PF05099 Tellurite resistance protein TerB AM408_RS19835 PF00226 DnaJ domain AM408_RS19840 PF03968 OstA-like protein AM408_RS19840 PF04453 LPS transport system D AM408_RS19845 PF00639 PPIC-type PPIASE domain AM408_RS19845 PF09312 SurA N-terminal domain AM408_RS19850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM408_RS19855 PF00398 Ribosomal RNA adenine dimethylase AM408_RS19860 PF04379 ApaG domain AM408_RS19865 PF00149 Calcineurin-like phosphoesterase AM408_RS19870 PF00186 Dihydrofolate reductase AM408_RS19875 PF02254 TrkA-N domain AM408_RS19875 PF00999 Sodium/hydrogen exchanger family AM408_RS19880 PF02525 Flavodoxin-like fold AM408_RS19885 PF00083 Sugar (and other) transporter AM408_RS19895 PF01494 FAD binding domain AM408_RS19900 PF00766 Electron transfer flavoprotein FAD-binding domain AM408_RS19900 PF01012 Electron transfer flavoprotein domain AM408_RS19905 PF01012 Electron transfer flavoprotein domain AM408_RS19910 PF02028 BCCT, betaine/carnitine/choline family transporter AM408_RS19915 PF02770 Acyl-CoA dehydrogenase, middle domain AM408_RS19915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM408_RS19915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM408_RS19920 PF02515 CoA-transferase family III AM408_RS19925 PF00501 AMP-binding enzyme AM408_RS19925 PF13193 AMP-binding enzyme C-terminal domain AM408_RS19930 PF00378 Enoyl-CoA hydratase/isomerase AM408_RS19935 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS19940 PF07180 CaiF/GrlA transcriptional regulator AM408_RS19950 PF02142 MGS-like domain AM408_RS19950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM408_RS19950 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM408_RS19955 PF00117 Glutamine amidotransferase class-I AM408_RS19955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM408_RS19965 PF01113 Dihydrodipicolinate reductase, N-terminus AM408_RS19965 PF05173 Dihydrodipicolinate reductase, C-terminus AM408_RS19970 PF01156 Inosine-uridine preferring nucleoside hydrolase AM408_RS19975 PF02401 LytB protein AM408_RS19980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM408_RS19985 PF01252 Signal peptidase (SPase) II AM408_RS19990 PF06827 Zinc finger found in FPG and IleRS AM408_RS19990 PF08264 Anticodon-binding domain of tRNA AM408_RS19990 PF00133 tRNA synthetases class I (I, L, M and V) AM408_RS19995 PF06574 FAD synthetase AM408_RS19995 PF01687 Riboflavin kinase AM408_RS20000 PF10837 Protein of unknown function (DUF2575) AM408_RS20005 PF01649 Ribosomal protein S20 AM408_RS20025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS20025 PF03466 LysR substrate binding domain AM408_RS20030 PF06965 Na+/H+ antiporter 1 AM408_RS20040 PF01848 Hok/gef family AM408_RS20045 PF01609 Transposase DDE domain AM408_RS20050 PF00226 DnaJ domain AM408_RS20050 PF01556 DnaJ C terminal domain AM408_RS20050 PF00684 DnaJ central domain AM408_RS20055 PF00012 Hsp70 protein AM408_RS20060 PF10807 Protein of unknown function (DUF2541) AM408_RS20065 PF13099 Domain of unknown function (DUF3944) AM408_RS20065 PF03981 Ubiquinol-cytochrome C chaperone AM408_RS20070 PF01184 GPR1/FUN34/yaaH family AM408_RS20075 PF00994 Probable molybdopterin binding domain AM408_RS20080 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM408_RS20085 PF01235 Sodium:alanine symporter family AM408_RS20090 PF03883 Peroxide stress protein YaaA AM408_RS20095 PF10697 Protein of unknown function (DUF2502) AM408_RS20100 PF14821 Threonine synthase N terminus AM408_RS20100 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS20105 PF00288 GHMP kinases N terminal domain AM408_RS20105 PF08544 GHMP kinases C terminal AM408_RS20110 PF00742 Homoserine dehydrogenase AM408_RS20110 PF03447 Homoserine dehydrogenase, NAD binding domain AM408_RS20110 PF01842 ACT domain AM408_RS20110 PF00696 Amino acid kinase family AM408_RS20110 PF13840 ACT domain AM408_RS20115 PF08254 Threonine leader peptide AM408_RS20120 PF00588 SpoU rRNA Methylase family AM408_RS20130 PF00486 Transcriptional regulatory protein, C terminal AM408_RS20130 PF00072 Response regulator receiver domain AM408_RS20135 PF06123 Inner membrane protein CreD AM408_RS20140 PF00672 HAMP domain AM408_RS20140 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS20145 PF00072 Response regulator receiver domain AM408_RS20145 PF00486 Transcriptional regulatory protein, C terminal AM408_RS20150 PF05981 CreA protein AM408_RS20155 PF12833 Helix-turn-helix domain AM408_RS20155 PF06445 GyrI-like small molecule binding domain AM408_RS20160 PF00300 Histidine phosphatase superfamily (branch 1) AM408_RS20165 PF01931 Protein of unknown function DUF84 AM408_RS20170 PF01371 Trp repressor protein AM408_RS20175 PF01464 Transglycosylase SLT domain AM408_RS20175 PF14718 Soluble lytic murein transglycosylase L domain AM408_RS20185 PF12848 ABC transporter AM408_RS20185 PF00005 ABC transporter AM408_RS20190 PF01381 Helix-turn-helix AM408_RS20190 PF13521 AAA domain AM408_RS20195 PF18073 Rubredoxin metal binding domain AM408_RS20200 PF18429 Domain of unknown function (DUF5609) AM408_RS20205 PF10144 Bacterial virulence factor haemolysin AM408_RS20210 PF10437 Bacterial lipoate protein ligase C-terminus AM408_RS20210 PF03099 Biotin/lipoate A/B protein ligase family AM408_RS20215 PF01048 Phosphorylase superfamily AM408_RS20220 PF01676 Metalloenzyme superfamily AM408_RS20225 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM408_RS20225 PF00591 Glycosyl transferase family, a/b domain AM408_RS20225 PF02885 Glycosyl transferase family, helical bundle domain AM408_RS20230 PF01791 DeoC/LacD family aldolase AM408_RS20235 PF11230 Protein of unknown function (DUF3029) AM408_RS20240 PF04055 Radical SAM superfamily AM408_RS20245 PF01026 TatD related DNase AM408_RS20250 PF01734 Patatin-like phospholipase AM408_RS20255 PF07043 Protein of unknown function (DUF1328) AM408_RS20260 PF04972 BON domain AM408_RS20265 PF16658 Class II release factor RF3, C-terminal domain AM408_RS20265 PF00009 Elongation factor Tu GTP binding domain AM408_RS20265 PF03144 Elongation factor Tu domain 2 AM408_RS20270 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS20275 PF00583 Acetyltransferase (GNAT) family AM408_RS20280 PF03603 DNA polymerase III psi subunit AM408_RS20285 PF05175 Methyltransferase small domain AM408_RS20285 PF08468 Methyltransferase small domain N-terminal AM408_RS20305 PF07256 Protein of unknown function (DUF1435) AM408_RS20310 PF11575 FhuF 2Fe-2S C-terminal domain AM408_RS20310 PF06276 Ferric iron reductase FhuF-like transporter AM408_RS20315 PF00196 Bacterial regulatory proteins, luxR family AM408_RS20320 PF00196 Bacterial regulatory proteins, luxR family AM408_RS20325 PF06738 Putative threonine/serine exporter AM408_RS20330 PF12821 Threonine/Serine exporter, ThrE AM408_RS20335 PF17948 DnaT DNA-binding domain AM408_RS20340 PF01695 IstB-like ATP binding protein AM408_RS20345 PF10696 Protein of unknown function (DUF2501) AM408_RS20350 PF00884 Sulfatase AM408_RS20355 PF00107 Zinc-binding dehydrogenase AM408_RS20355 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS20360 PF00392 Bacterial regulatory proteins, gntR family AM408_RS20360 PF07729 FCD domain AM408_RS20365 PF07690 Major Facilitator Superfamily AM408_RS20370 PF00672 HAMP domain AM408_RS20370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM408_RS20370 PF02203 Tar ligand binding domain homologue AM408_RS20380 PF02554 Carbon starvation protein CstA AM408_RS20380 PF13722 5TM C-terminal transporter carbon starvation CstA AM408_RS20385 PF04328 Selenoprotein, putative AM408_RS20390 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM408_RS20390 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM408_RS20410 PF07690 Major Facilitator Superfamily AM408_RS20415 PF04286 Protein of unknown function (DUF445) AM408_RS20420 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AM408_RS20425 PF01869 BadF/BadG/BcrA/BcrD ATPase family AM408_RS20430 PF11823 Protein of unknown function (DUF3343) AM408_RS20435 PF06977 SdiA-regulated AM408_RS20440 PF06779 Uncharacterised MFS-type transporter YbfB AM408_RS20445 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AM408_RS20450 PF07670 Nucleoside recognition AM408_RS20455 PF07670 Nucleoside recognition AM408_RS20460 PF01979 Amidohydrolase family AM408_RS20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS20465 PF03466 LysR substrate binding domain AM408_RS20470 PF04965 Gene 25-like lysozyme AM408_RS20485 PF07729 FCD domain AM408_RS20485 PF00392 Bacterial regulatory proteins, gntR family AM408_RS20495 PF08125 Mannitol dehydrogenase C-terminal domain AM408_RS20495 PF01232 Mannitol dehydrogenase Rossmann domain AM408_RS20500 PF03786 D-mannonate dehydratase (UxuA) AM408_RS20510 PF02447 GntP family permease AM408_RS20515 PF00419 Fimbrial protein AM408_RS20515 PF09160 FimH, mannose binding AM408_RS20535 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM408_RS20545 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM408_RS20565 PF05717 IS66 Orf2 like protein AM408_RS20570 PF13817 IS66 C-terminal element AM408_RS20570 PF03050 Transposase IS66 family AM408_RS20570 PF13005 zinc-finger binding domain of transposase IS66 AM408_RS20570 PF13007 Transposase C of IS166 homeodomain AM408_RS20580 PF13737 Transposase DDE domain AM408_RS20590 PF13276 HTH-like domain AM408_RS20590 PF00665 Integrase core domain AM408_RS20590 PF13333 Integrase core domain AM408_RS20605 PF08281 Sigma-70, region 4 AM408_RS20605 PF04542 Sigma-70 region 2 AM408_RS20610 PF16220 Domain of unknown function (DUF4880) AM408_RS20610 PF04773 FecR protein AM408_RS20615 PF07660 Secretin and TonB N terminus short domain AM408_RS20615 PF07715 TonB-dependent Receptor Plug Domain AM408_RS20615 PF00593 TonB dependent receptor AM408_RS20620 PF01497 Periplasmic binding protein AM408_RS20625 PF01032 FecCD transport family AM408_RS20630 PF01032 FecCD transport family AM408_RS20635 PF00005 ABC transporter AM408_RS20650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS20670 PF01522 Polysaccharide deacetylase AM408_RS20675 PF13439 Glycosyltransferase Family 4 AM408_RS20675 PF00534 Glycosyl transferases group 1 AM408_RS20680 PF04393 Protein of unknown function (DUF535) AM408_RS20685 PF03279 Bacterial lipid A biosynthesis acyltransferase AM408_RS20690 PF00665 Integrase core domain AM408_RS20690 PF13276 HTH-like domain AM408_RS20690 PF13333 Integrase core domain AM408_RS20695 PF02028 BCCT, betaine/carnitine/choline family transporter AM408_RS20705 PF10011 Predicted membrane protein (DUF2254) AM408_RS20715 PF00440 Bacterial regulatory proteins, tetR family AM408_RS20715 PF16925 Tetracyclin repressor-like, C-terminal domain AM408_RS20720 PF01695 IstB-like ATP binding protein AM408_RS20740 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS20745 PF00665 Integrase core domain AM408_RS20745 PF13276 HTH-like domain AM408_RS20745 PF13333 Integrase core domain AM408_RS20755 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS20820 PF13356 Arm DNA-binding domain AM408_RS20820 PF00589 Phage integrase family AM408_RS20830 PF00107 Zinc-binding dehydrogenase AM408_RS20830 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS20835 PF05872 Bacterial protein of unknown function (DUF853) AM408_RS20840 PF03739 Lipopolysaccharide export system permease LptF/LptG AM408_RS20845 PF03739 Lipopolysaccharide export system permease LptF/LptG AM408_RS20850 PF00883 Cytosol aminopeptidase family, catalytic domain AM408_RS20850 PF02789 Cytosol aminopeptidase family, N-terminal domain AM408_RS20855 PF04364 DNA polymerase III chi subunit, HolC AM408_RS20860 PF08264 Anticodon-binding domain of tRNA AM408_RS20860 PF00133 tRNA synthetases class I (I, L, M and V) AM408_RS20860 PF10458 Valyl tRNA synthetase tRNA binding arm AM408_RS20865 PF05987 Bacterial protein of unknown function (DUF898) AM408_RS20870 PF00583 Acetyltransferase (GNAT) family AM408_RS20875 PF06877 Regulator of ribonuclease activity B AM408_RS20880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM408_RS20880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM408_RS20895 PF04074 YhcH/YjgK/YiaL AM408_RS20900 PF00440 Bacterial regulatory proteins, tetR family AM408_RS20910 PF01042 Endoribonuclease L-PSP AM408_RS20920 PF08052 PyrBI operon leader peptide AM408_RS20925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM408_RS20925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM408_RS20930 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM408_RS20930 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM408_RS20935 PF01042 Endoribonuclease L-PSP AM408_RS20940 PF00690 Cation transporter/ATPase, N-terminus AM408_RS20940 PF00689 Cation transporting ATPase, C-terminus AM408_RS20945 PF00356 Bacterial regulatory proteins, lacI family AM408_RS20950 PF00367 phosphotransferase system, EIIB AM408_RS20950 PF02378 Phosphotransferase system, EIIC AM408_RS20955 PF00128 Alpha amylase, catalytic domain AM408_RS20955 PF11941 Domain of unknown function (DUF3459) AM408_RS20960 PF03477 ATP cone domain AM408_RS20960 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM408_RS20970 PF07361 Cytochrome b562 AM408_RS20975 PF01523 Putative modulator of DNA gyrase AM408_RS20980 PF04751 Protein of unknown function (DUF615) AM408_RS20985 PF08245 Mur ligase middle domain AM408_RS20985 PF01225 Mur ligase family, catalytic domain AM408_RS20985 PF02875 Mur ligase family, glutamate ligase domain AM408_RS20990 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM408_RS20995 PF02653 Branched-chain amino acid transport system / permease component AM408_RS21000 PF02653 Branched-chain amino acid transport system / permease component AM408_RS21005 PF00005 ABC transporter AM408_RS21010 PF13407 Periplasmic binding protein domain AM408_RS21015 PF00719 Inorganic pyrophosphatase AM408_RS21020 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM408_RS21025 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM408_RS21030 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM408_RS21035 PF04357 TamB, inner membrane protein subunit of TAM complex AM408_RS21040 PF07244 Surface antigen variable number repeat AM408_RS21040 PF17243 POTRA domain TamA domain 1 AM408_RS21040 PF01103 Surface antigen AM408_RS21050 PF01625 Peptide methionine sulfoxide reductase AM408_RS21055 PF00571 CBS domain AM408_RS21055 PF01595 Cyclin M transmembrane N-terminal domain AM408_RS21055 PF03471 Transporter associated domain AM408_RS21060 PF06526 Protein of unknown function (DUF1107) AM408_RS21065 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM408_RS21080 PF00459 Inositol monophosphatase family AM408_RS21085 PF02872 5'-nucleotidase, C-terminal domain AM408_RS21085 PF00149 Calcineurin-like phosphoesterase AM408_RS21090 PF01638 HxlR-like helix-turn-helix AM408_RS21095 PF05368 NmrA-like family AM408_RS21100 PF00892 EamA-like transporter family AM408_RS21105 PF04405 Domain of Unknown function (DUF542) AM408_RS21105 PF01814 Hemerythrin HHE cation binding domain AM408_RS21110 PF00324 Amino acid permease AM408_RS21115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM408_RS21115 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM408_RS21125 PF08525 Opacity-associated protein A N-terminal motif AM408_RS21125 PF04225 Opacity-associated protein A LysM-like domain AM408_RS21130 PF17938 Tetracyclin repressor-like, C-terminal domain AM408_RS21135 PF12323 Helix-turn-helix domain AM408_RS21135 PF01385 Probable transposase AM408_RS21135 PF07282 Putative transposase DNA-binding domain AM408_RS21140 PF01797 Transposase IS200 like AM408_RS21150 PF10887 Protein of unknown function (DUF2686) AM408_RS21155 PF03948 Ribosomal protein L9, C-terminal domain AM408_RS21155 PF01281 Ribosomal protein L9, N-terminal domain AM408_RS21160 PF01084 Ribosomal protein S18 AM408_RS21165 PF00436 Single-strand binding protein family AM408_RS21170 PF01250 Ribosomal protein S6 AM408_RS21175 PF07338 Protein of unknown function (DUF1471) AM408_RS21180 PF07274 Protein of unknown function (DUF1440) AM408_RS21185 PF00596 Class II Aldolase and Adducin N-terminal domain AM408_RS21190 PF01261 Xylose isomerase-like TIM barrel AM408_RS21195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM408_RS21200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS21205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS21210 PF03611 PTS system sugar-specific permease component AM408_RS21220 PF00455 DeoR C terminal sensor domain AM408_RS21220 PF08220 DeoR-like helix-turn-helix domain AM408_RS21225 PF00326 Prolyl oligopeptidase family AM408_RS21230 PF07338 Protein of unknown function (DUF1471) AM408_RS21235 PF07338 Protein of unknown function (DUF1471) AM408_RS21245 PF02770 Acyl-CoA dehydrogenase, middle domain AM408_RS21245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM408_RS21245 PF18158 Adaptive response protein AidB N-terminal domain AM408_RS21250 PF03738 Glutathionylspermidine synthase preATP-grasp AM408_RS21255 PF06693 Protein of unknown function (DUF1190) AM408_RS21260 PF03994 Domain of Unknown Function (DUF350) AM408_RS21265 PF10679 Protein of unknown function (DUF2491) AM408_RS21280 PF08666 SAF domain AM408_RS21280 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM408_RS21285 PF07690 Major Facilitator Superfamily AM408_RS21290 PF00701 Dihydrodipicolinate synthetase family AM408_RS21295 PF01614 Bacterial transcriptional regulator AM408_RS21295 PF09339 IclR helix-turn-helix domain AM408_RS21300 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM408_RS21300 PF00588 SpoU rRNA Methylase family AM408_RS21305 PF08206 Ribonuclease B OB domain AM408_RS21305 PF08461 Ribonuclease R winged-helix domain AM408_RS21305 PF00773 RNB domain AM408_RS21305 PF00575 S1 RNA binding domain AM408_RS21305 PF17876 Cold shock domain AM408_RS21310 PF02082 Transcriptional regulator AM408_RS21315 PF00709 Adenylosuccinate synthetase AM408_RS21320 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM408_RS21325 PF01145 SPFH domain / Band 7 family AM408_RS21330 PF01145 SPFH domain / Band 7 family AM408_RS21330 PF12221 Bacterial membrane protein N terminal AM408_RS21335 PF16360 GTP-binding GTPase Middle Region AM408_RS21335 PF13167 GTP-binding GTPase N-terminal AM408_RS21335 PF01926 50S ribosome-binding GTPase AM408_RS21340 PF17209 Hfq protein AM408_RS21350 PF01119 DNA mismatch repair protein, C-terminal domain AM408_RS21350 PF08676 MutL C terminal dimerisation domain AM408_RS21355 PF01520 N-acetylmuramoyl-L-alanine amidase AM408_RS21360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM408_RS21365 PF03853 YjeF-related protein N-terminus AM408_RS21365 PF01256 Carbohydrate kinase AM408_RS21370 PF08331 Domain of unknown function (DUF1730) AM408_RS21390 PF00929 Exonuclease AM408_RS21400 PF03193 RsgA GTPase AM408_RS21405 PF02666 Phosphatidylserine decarboxylase AM408_RS21410 PF00924 Mechanosensitive ion channel AM408_RS21410 PF12795 Mechanosensitive ion channel porin domain AM408_RS21410 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM408_RS21415 PF10840 Protein of unknown function (DUF2645) AM408_RS21425 PF13520 Amino acid permease AM408_RS21430 PF00152 tRNA synthetases class II (D, K and N) AM408_RS21435 PF00890 FAD binding domain AM408_RS21435 PF02910 Fumarate reductase flavoprotein C-term AM408_RS21440 PF13085 2Fe-2S iron-sulfur cluster binding domain AM408_RS21440 PF13183 4Fe-4S dicluster domain AM408_RS21445 PF02300 Fumarate reductase subunit C AM408_RS21450 PF02313 Fumarate reductase subunit D AM408_RS21455 PF00144 Beta-lactamase AM408_RS21460 PF08212 Lipocalin-like domain AM408_RS21465 PF00893 Small Multidrug Resistance protein AM408_RS21470 PF08085 Entericidin EcnA/B family AM408_RS21475 PF08085 Entericidin EcnA/B family AM408_RS21480 PF09285 Elongation factor P, C-terminal AM408_RS21480 PF08207 Elongation factor P (EF-P) KOW-like domain AM408_RS21480 PF01132 Elongation factor P (EF-P) OB domain AM408_RS21485 PF04055 Radical SAM superfamily AM408_RS21490 PF15922 YjeJ-like AM408_RS21495 PF13698 Domain of unknown function (DUF4156) AM408_RS21500 PF00118 TCP-1/cpn60 chaperonin family AM408_RS21505 PF00166 Chaperonin 10 Kd subunit AM408_RS21510 PF13520 Amino acid permease AM408_RS21515 PF04186 FxsA cytoplasmic membrane protein AM408_RS21520 PF10415 Fumarase C C-terminus AM408_RS21520 PF00206 Lyase AM408_RS21525 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM408_RS21530 PF03091 CutA1 divalent ion tolerance protein AM408_RS21535 PF02683 Cytochrome C biogenesis protein transmembrane region AM408_RS21535 PF11412 Disulphide bond corrector protein DsbC AM408_RS21555 PF18500 CadC C-terminal domain 1 AM408_RS21555 PF00486 Transcriptional regulatory protein, C terminal AM408_RS21560 PF13520 Amino acid permease AM408_RS21565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM408_RS21565 PF01276 Orn/Lys/Arg decarboxylase, major domain AM408_RS21565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM408_RS21570 PF00854 POT family AM408_RS21575 PF01336 OB-fold nucleic acid binding domain AM408_RS21575 PF00152 tRNA synthetases class II (D, K and N) AM408_RS21580 PF10753 Toxin GhoT_OrtT AM408_RS21585 PF11080 Endoribonuclease GhoS AM408_RS21595 PF14542 GCN5-related N-acetyl-transferase AM408_RS21600 PF06902 Divergent 4Fe-4S mono-cluster AM408_RS21605 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM408_RS21605 PF17203 Single cache domain 3 AM408_RS21605 PF00989 PAS fold AM408_RS21605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS21610 PF00072 Response regulator receiver domain AM408_RS21620 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM408_RS21625 PF05681 Fumarate hydratase (Fumerase) AM408_RS21625 PF05683 Fumarase C-terminus AM408_RS21630 PF09997 Predicted membrane protein (DUF2238) AM408_RS21640 PF02056 Family 4 glycosyl hydrolase AM408_RS21640 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM408_RS21645 PF12833 Helix-turn-helix domain AM408_RS21650 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM408_RS21650 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM408_RS21650 PF01276 Orn/Lys/Arg decarboxylase, major domain AM408_RS21655 PF12833 Helix-turn-helix domain AM408_RS21660 PF13520 Amino acid permease AM408_RS21665 PF08019 Phosphoethanolamine transferase EptA/EptB AM408_RS21665 PF00884 Sulfatase AM408_RS21670 PF00072 Response regulator receiver domain AM408_RS21670 PF00486 Transcriptional regulatory protein, C terminal AM408_RS21675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS21675 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS21685 PF08946 Osmosensory transporter coiled coil AM408_RS21685 PF00083 Sugar (and other) transporter AM408_RS21690 PF13990 YjcZ-like protein AM408_RS21705 PF08274 PhnA Zinc-Ribbon AM408_RS21705 PF03831 PhnA domain AM408_RS21710 PF06983 3-demethylubiquinone-9 3-methyltransferase AM408_RS21715 PF00005 ABC transporter AM408_RS21730 PF00392 Bacterial regulatory proteins, gntR family AM408_RS21730 PF07702 UTRA domain AM408_RS21735 PF06754 Phosphonate metabolism protein PhnG AM408_RS21740 PF05845 Bacterial phosphonate metabolism protein (PhnH) AM408_RS21745 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM408_RS21750 PF06007 Phosphonate metabolism protein PhnJ AM408_RS21755 PF00005 ABC transporter AM408_RS21760 PF00005 ABC transporter AM408_RS21765 PF07969 Amidohydrolase family AM408_RS21775 PF00583 Acetyltransferase (GNAT) family AM408_RS21780 PF12706 Beta-lactamase superfamily domain AM408_RS21790 PF02502 Ribose/Galactose Isomerase AM408_RS21800 PF01380 SIS domain AM408_RS21800 PF01418 Helix-turn-helix domain, rpiR family AM408_RS21805 PF13407 Periplasmic binding protein domain AM408_RS21810 PF00005 ABC transporter AM408_RS21815 PF02653 Branched-chain amino acid transport system / permease component AM408_RS21820 PF00834 Ribulose-phosphate 3 epimerase family AM408_RS21825 PF00480 ROK family AM408_RS21830 PF14864 Alkyl sulfatase C-terminal AM408_RS21830 PF14863 Alkyl sulfatase dimerisation AM408_RS21830 PF00753 Metallo-beta-lactamase superfamily AM408_RS21835 PF17090 Uncharacterised protein family AM408_RS21840 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS21840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS21845 PF04632 Fusaric acid resistance protein family AM408_RS21850 PF02321 Outer membrane efflux protein AM408_RS21860 PF08238 Sel1 repeat AM408_RS21865 PF00375 Sodium:dicarboxylate symporter family AM408_RS21880 PF03918 Cytochrome C biogenesis protein AM408_RS21885 PF01578 Cytochrome C assembly protein AM408_RS21885 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM408_RS21890 PF03916 Polysulphide reductase, NrfD AM408_RS21895 PF13247 4Fe-4S dicluster domain AM408_RS21895 PF00037 4Fe-4S binding domain AM408_RS21900 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AM408_RS21900 PF13435 Cytochrome c554 and c-prime AM408_RS21905 PF02335 Cytochrome c552 AM408_RS21915 PF13193 AMP-binding enzyme C-terminal domain AM408_RS21915 PF16177 Acetyl-coenzyme A synthetase N-terminus AM408_RS21915 PF00501 AMP-binding enzyme AM408_RS21920 PF04341 Protein of unknown function, DUF485 AM408_RS21925 PF00474 Sodium:solute symporter family AM408_RS21930 PF00805 Pentapeptide repeats (8 copies) AM408_RS21935 PF00999 Sodium/hydrogen exchanger family AM408_RS21940 PF00860 Permease family AM408_RS21960 PF09278 MerR, DNA binding AM408_RS21960 PF00376 MerR family regulatory protein AM408_RS21965 PF12833 Helix-turn-helix domain AM408_RS21970 PF00563 EAL domain AM408_RS21970 PF12792 CSS motif domain associated with EAL AM408_RS21980 PF15940 Family of unknown function AM408_RS22015 PF02899 Phage integrase, N-terminal SAM-like domain AM408_RS22015 PF00589 Phage integrase family AM408_RS22020 PF00436 Single-strand binding protein family AM408_RS22025 PF17760 UvrA interaction domain AM408_RS22025 PF00005 ABC transporter AM408_RS22025 PF17755 UvrA DNA-binding domain AM408_RS22030 PF04237 YjbR AM408_RS22035 PF01894 Uncharacterised protein family UPF0047 AM408_RS22040 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM408_RS22055 PF00155 Aminotransferase class I and II AM408_RS22060 PF01168 Alanine racemase, N-terminal domain AM408_RS22060 PF00842 Alanine racemase, C-terminal domain AM408_RS22065 PF00772 DnaB-like helicase N terminal domain AM408_RS22065 PF03796 DnaB-like helicase C terminal domain AM408_RS22070 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS22070 PF00107 Zinc-binding dehydrogenase AM408_RS22075 PF09583 Phage shock protein G (Phageshock_PspG) AM408_RS22080 PF01207 Dihydrouridine synthase (Dus) AM408_RS22085 PF10897 Protein of unknown function (DUF2713) AM408_RS22095 PF01475 Ferric uptake regulator family AM408_RS22100 PF05532 CsbD-like AM408_RS22105 PF01554 MatE AM408_RS22110 PF01726 LexA DNA binding domain AM408_RS22110 PF00717 Peptidase S24-like AM408_RS22115 PF01219 Prokaryotic diacylglycerol kinase AM408_RS22120 PF01553 Acyltransferase AM408_RS22125 PF01040 UbiA prenyltransferase family AM408_RS22130 PF04345 Chorismate lyase AM408_RS22140 PF13981 SopA-like central domain AM408_RS22140 PF13599 Pentapeptide repeats (9 copies) AM408_RS22150 PF07148 Maltose operon periplasmic protein precursor (MalM) AM408_RS22155 PF02264 LamB porin AM408_RS22160 PF17912 MalK OB fold domain AM408_RS22160 PF00005 ABC transporter AM408_RS22170 PF01547 Bacterial extracellular solute-binding protein AM408_RS22175 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS22175 PF14785 Maltose transport system permease protein MalF P2 domain AM408_RS22180 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS22185 PF00083 Sugar (and other) transporter AM408_RS22190 PF06146 Phosphate-starvation-inducible E AM408_RS22195 PF17089 Uncharacterised protein family AM408_RS22200 PF06082 Exopolysaccharide biosynthesis protein YbjH AM408_RS22205 PF06251 Capsule biosynthesis GfcC AM408_RS22210 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM408_RS22215 PF11106 Exopolysaccharide production protein YjbE AM408_RS22220 PF00342 Phosphoglucose isomerase AM408_RS22235 PF00696 Amino acid kinase family AM408_RS22235 PF01842 ACT domain AM408_RS22240 PF11656 YjbD family (DUF3811) AM408_RS22245 PF00849 RNA pseudouridylate synthase AM408_RS22245 PF01479 S4 domain AM408_RS22250 PF03575 Peptidase family S51 AM408_RS22255 PF02690 Na+/Pi-cotransporter AM408_RS22260 PF00809 Pterin binding enzyme AM408_RS22260 PF02574 Homocysteine S-methyltransferase AM408_RS22260 PF02607 B12 binding domain AM408_RS22260 PF02310 B12 binding domain AM408_RS22260 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM408_RS22265 PF09339 IclR helix-turn-helix domain AM408_RS22265 PF01614 Bacterial transcriptional regulator AM408_RS22270 PF07906 ShET2 enterotoxin, N-terminal region AM408_RS22275 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM408_RS22280 PF00463 Isocitrate lyase family AM408_RS22285 PF01274 Malate synthase AM408_RS22290 PF04204 Homoserine O-succinyltransferase AM408_RS22295 PF13673 Acetyltransferase (GNAT) domain AM408_RS22330 PF01808 AICARFT/IMPCHase bienzyme AM408_RS22330 PF02142 MGS-like domain AM408_RS22335 PF02844 Phosphoribosylglycinamide synthetase, N domain AM408_RS22335 PF02843 Phosphoribosylglycinamide synthetase, C domain AM408_RS22335 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM408_RS22340 PF02954 Bacterial regulatory protein, Fis family AM408_RS22340 PF00072 Response regulator receiver domain AM408_RS22340 PF00158 Sigma-54 interaction domain AM408_RS22345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS22345 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS22355 PF13801 Heavy-metal resistance AM408_RS22360 PF07356 Protein of unknown function (DUF1481) AM408_RS22365 PF00216 Bacterial DNA-binding protein AM408_RS22370 PF04222 Protein of unknown function (DUF416) AM408_RS22375 PF04493 Endonuclease V AM408_RS22380 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM408_RS22385 PF00293 NUDIX domain AM408_RS22385 PF09297 NADH pyrophosphatase zinc ribbon domain AM408_RS22390 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM408_RS22395 PF13667 ThiC-associated domain AM408_RS22395 PF01964 Radical SAM ThiC family AM408_RS22400 PF02581 Thiamine monophosphate synthase AM408_RS22405 PF00899 ThiF family AM408_RS22410 PF02597 ThiS family AM408_RS22415 PF05690 Thiazole biosynthesis protein ThiG AM408_RS22420 PF04055 Radical SAM superfamily AM408_RS22420 PF06968 Biotin and Thiamin Synthesis associated domain AM408_RS22430 PF05000 RNA polymerase Rpb1, domain 4 AM408_RS22430 PF04983 RNA polymerase Rpb1, domain 3 AM408_RS22430 PF00623 RNA polymerase Rpb1, domain 2 AM408_RS22430 PF04998 RNA polymerase Rpb1, domain 5 AM408_RS22430 PF04997 RNA polymerase Rpb1, domain 1 AM408_RS22435 PF04560 RNA polymerase Rpb2, domain 7 AM408_RS22435 PF00562 RNA polymerase Rpb2, domain 6 AM408_RS22435 PF10385 RNA polymerase beta subunit external 1 domain AM408_RS22435 PF04565 RNA polymerase Rpb2, domain 3 AM408_RS22435 PF04561 RNA polymerase Rpb2, domain 2 AM408_RS22435 PF04563 RNA polymerase beta subunit AM408_RS22440 PF00542 Ribosomal protein L7/L12 C-terminal domain AM408_RS22440 PF16320 Ribosomal protein L7/L12 dimerisation domain AM408_RS22445 PF00466 Ribosomal protein L10 AM408_RS22455 PF00687 Ribosomal protein L1p/L10e family AM408_RS22460 PF03946 Ribosomal protein L11, N-terminal domain AM408_RS22460 PF00298 Ribosomal protein L11, RNA binding domain AM408_RS22465 PF02357 Transcription termination factor nusG AM408_RS22465 PF00467 KOW motif AM408_RS22470 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM408_RS22475 PF00009 Elongation factor Tu GTP binding domain AM408_RS22475 PF03143 Elongation factor Tu C-terminal domain AM408_RS22475 PF03144 Elongation factor Tu domain 2 AM408_RS22510 PF00485 Phosphoribulokinase / Uridine kinase family AM408_RS22515 PF08279 HTH domain AM408_RS22515 PF03099 Biotin/lipoate A/B protein ligase family AM408_RS22515 PF02237 Biotin protein ligase C terminal domain AM408_RS22520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM408_RS22520 PF01565 FAD binding domain AM408_RS22545 PF01177 Asp/Glu/Hydantoin racemase AM408_RS22550 PF07715 TonB-dependent Receptor Plug Domain AM408_RS22550 PF00593 TonB dependent receptor AM408_RS22555 PF05958 tRNA (Uracil-5-)-methyltransferase AM408_RS22560 PF07226 Protein of unknown function (DUF1422) AM408_RS22565 PF00440 Bacterial regulatory proteins, tetR family AM408_RS22575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM408_RS22575 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS22580 PF03466 LysR substrate binding domain AM408_RS22580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS22585 PF00206 Lyase AM408_RS22585 PF14698 Argininosuccinate lyase C-terminal AM408_RS22590 PF00696 Amino acid kinase family AM408_RS22595 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM408_RS22595 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM408_RS22600 PF01546 Peptidase family M20/M25/M40 AM408_RS22600 PF07687 Peptidase dimerisation domain AM408_RS22610 PF00311 Phosphoenolpyruvate carboxylase AM408_RS22615 PF00884 Sulfatase AM408_RS22620 PF12833 Helix-turn-helix domain AM408_RS22625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS22630 PF04055 Radical SAM superfamily AM408_RS22635 PF01228 Glycine radical AM408_RS22635 PF02901 Pyruvate formate lyase-like AM408_RS22640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS22650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS22650 PF00381 PTS HPr component phosphorylation site AM408_RS22650 PF02896 PEP-utilising enzyme, TIM barrel domain AM408_RS22650 PF00391 PEP-utilising enzyme, mobile domain AM408_RS22650 PF05524 PEP-utilising enzyme, N-terminal AM408_RS22655 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM408_RS22660 PF00465 Iron-containing alcohol dehydrogenase AM408_RS22665 PF06940 Domain of unknown function (DUF1287) AM408_RS22670 PF00892 EamA-like transporter family AM408_RS22675 PF00141 Peroxidase AM408_RS22680 PF02219 Methylenetetrahydrofolate reductase AM408_RS22685 PF03447 Homoserine dehydrogenase, NAD binding domain AM408_RS22685 PF00696 Amino acid kinase family AM408_RS22685 PF00742 Homoserine dehydrogenase AM408_RS22690 PF01053 Cys/Met metabolism PLP-dependent enzyme AM408_RS22695 PF01340 Met Apo-repressor, MetJ AM408_RS22700 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM408_RS22705 PF01197 Ribosomal protein L31 AM408_RS22710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM408_RS22710 PF18074 Primosomal protein N C-terminal domain AM408_RS22710 PF17764 3′ DNA-binding domain (3′BD) AM408_RS22710 PF00270 DEAD/DEAH box helicase AM408_RS22710 PF00271 Helicase conserved C-terminal domain AM408_RS22715 PF00356 Bacterial regulatory proteins, lacI family AM408_RS22720 PF05036 Sporulation related domain AM408_RS22725 PF00227 Proteasome subunit AM408_RS22730 PF07724 AAA domain (Cdc48 subfamily) AM408_RS22730 PF10431 C-terminal, D2-small domain, of ClpB protein AM408_RS22730 PF00004 ATPase family associated with various cellular activities (AAA) AM408_RS22735 PF01040 UbiA prenyltransferase family AM408_RS22740 PF03737 Aldolase/RraA AM408_RS22745 PF06005 Cell division protein ZapB AM408_RS22750 PF00230 Major intrinsic protein AM408_RS22755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS22755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS22760 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM408_RS22765 PF00175 Oxidoreductase NAD-binding domain AM408_RS22765 PF00970 Oxidoreductase FAD-binding domain AM408_RS22770 PF00582 Universal stress protein family AM408_RS22775 PF04175 Protein of unknown function (DUF406) AM408_RS22780 PF05656 Protein of unknown function (DUF805) AM408_RS22785 PF07305 Protein of unknown function (DUF1454) AM408_RS22795 PF00121 Triosephosphate isomerase AM408_RS22800 PF02611 CDP-diacylglycerol pyrophosphatase AM408_RS22810 PF00365 Phosphofructokinase AM408_RS22815 PF16916 Dimerisation domain of Zinc Transporter AM408_RS22815 PF01545 Cation efflux family AM408_RS22830 PF04606 Ogr/Delta-like zinc finger AM408_RS22870 PF00239 Resolvase, N terminal domain AM408_RS22870 PF02796 Helix-turn-helix domain of resolvase AM408_RS22880 PF05717 IS66 Orf2 like protein AM408_RS22890 PF07484 Phage Tail Collar Domain AM408_RS22895 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM408_RS22900 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM408_RS22905 PF01695 IstB-like ATP binding protein AM408_RS22910 PF00665 Integrase core domain AM408_RS22915 PF05840 Bacteriophage replication gene A protein (GPA) AM408_RS22955 PF00589 Phage integrase family AM408_RS22955 PF02899 Phage integrase, N-terminal SAM-like domain AM408_RS22960 PF07813 LTXXQ motif family protein AM408_RS22965 PF00486 Transcriptional regulatory protein, C terminal AM408_RS22965 PF00072 Response regulator receiver domain AM408_RS22970 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS22970 PF00672 HAMP domain AM408_RS22970 PF16527 Two-component sensor protein CpxA, periplasmic domain AM408_RS22970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS22975 PF03475 3-alpha domain AM408_RS22975 PF03473 MOSC domain AM408_RS22980 PF03812 2-keto-3-deoxygluconate permease AM408_RS22990 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM408_RS22990 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM408_RS22995 PF06379 L-rhamnose-proton symport protein (RhaT) AM408_RS23000 PF02311 AraC-like ligand binding domain AM408_RS23000 PF12833 Helix-turn-helix domain AM408_RS23005 PF02311 AraC-like ligand binding domain AM408_RS23005 PF12833 Helix-turn-helix domain AM408_RS23010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS23010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS23015 PF06134 L-rhamnose isomerase (RhaA) AM408_RS23020 PF00596 Class II Aldolase and Adducin N-terminal domain AM408_RS23025 PF05336 L-rhamnose mutarotase AM408_RS23030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS23035 PF02378 Phosphotransferase system, EIIC AM408_RS23035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS23040 PF05343 M42 glutamyl aminopeptidase AM408_RS23045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS23045 PF08279 HTH domain AM408_RS23050 PF12889 Protein of unknown function (DUF3829) AM408_RS23055 PF02634 FdhD/NarQ family AM408_RS23065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM408_RS23065 PF00384 Molybdopterin oxidoreductase AM408_RS23065 PF01568 Molydopterin dinucleotide binding domain AM408_RS23070 PF00384 Molybdopterin oxidoreductase AM408_RS23070 PF01568 Molydopterin dinucleotide binding domain AM408_RS23070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM408_RS23075 PF13247 4Fe-4S dicluster domain AM408_RS23075 PF09163 Formate dehydrogenase N, transmembrane AM408_RS23080 PF01292 Prokaryotic cytochrome b561 AM408_RS23085 PF04216 Protein involved in formate dehydrogenase formation AM408_RS23095 PF01402 Ribbon-helix-helix protein, copG family AM408_RS23100 PF00583 Acetyltransferase (GNAT) family AM408_RS23100 PF09500 Putative thioesterase (yiiD_Cterm) AM408_RS23105 PF02580 D-Tyr-tRNA(Tyr) deacylase AM408_RS23110 PF03631 Virulence factor BrkB AM408_RS23115 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS23120 PF08220 DeoR-like helix-turn-helix domain AM408_RS23120 PF00455 DeoR C terminal sensor domain AM408_RS23125 PF00294 pfkB family carbohydrate kinase AM408_RS23130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM408_RS23130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM408_RS23135 PF01791 DeoC/LacD family aldolase AM408_RS23145 PF01263 Aldose 1-epimerase AM408_RS23150 PF01055 Glycosyl hydrolases family 31 AM408_RS23165 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM408_RS23170 PF07690 Major Facilitator Superfamily AM408_RS23175 PF01261 Xylose isomerase-like TIM barrel AM408_RS23180 PF07702 UTRA domain AM408_RS23180 PF00392 Bacterial regulatory proteins, gntR family AM408_RS23185 PF03144 Elongation factor Tu domain 2 AM408_RS23185 PF00009 Elongation factor Tu GTP binding domain AM408_RS23185 PF00679 Elongation factor G C-terminus AM408_RS23195 PF03951 Glutamine synthetase, beta-Grasp domain AM408_RS23195 PF00120 Glutamine synthetase, catalytic domain AM408_RS23200 PF00512 His Kinase A (phospho-acceptor) domain AM408_RS23200 PF00989 PAS fold AM408_RS23200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS23205 PF02954 Bacterial regulatory protein, Fis family AM408_RS23205 PF00072 Response regulator receiver domain AM408_RS23205 PF00158 Sigma-54 interaction domain AM408_RS23215 PF06969 HemN C-terminal domain AM408_RS23215 PF04055 Radical SAM superfamily AM408_RS23220 PF04220 Der GTPase activator (YihI) AM408_RS23230 PF01926 50S ribosome-binding GTPase AM408_RS23235 PF01367 5'-3' exonuclease, C-terminal SAM fold AM408_RS23235 PF00476 DNA polymerase family A AM408_RS23235 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM408_RS23235 PF01612 3'-5' exonuclease AM408_RS23245 PF01553 Acyltransferase AM408_RS23250 PF06097 Bacterial protein of unknown function (DUF945) AM408_RS23255 PF01323 DSBA-like thioredoxin domain AM408_RS23260 PF01636 Phosphotransferase enzyme family AM408_RS23265 PF06288 Protein of unknown function (DUF1040) AM408_RS23270 PF12804 MobA-like NTP transferase domain AM408_RS23275 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM408_RS23305 PF12724 Flavodoxin domain AM408_RS23310 PF02386 Cation transport protein AM408_RS23315 PF09186 Domain of unknown function (DUF1949) AM408_RS23315 PF01205 Uncharacterized protein family UPF0029 AM408_RS23320 PF00557 Metallopeptidase family M24 AM408_RS23325 PF00378 Enoyl-CoA hydratase/isomerase AM408_RS23325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM408_RS23325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM408_RS23330 PF00108 Thiolase, N-terminal domain AM408_RS23330 PF02803 Thiolase, C-terminal domain AM408_RS23335 PF00970 Oxidoreductase FAD-binding domain AM408_RS23335 PF00175 Oxidoreductase NAD-binding domain AM408_RS23340 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM408_RS23345 PF02357 Transcription termination factor nusG AM408_RS23350 PF01026 TatD related DNase AM408_RS23355 PF00902 Sec-independent protein translocase protein (TatC) AM408_RS23365 PF02416 mttA/Hcf106 family AM408_RS23370 PF03109 ABC1 family AM408_RS23375 PF02036 SCP-2 sterol transfer family AM408_RS23380 PF01209 ubiE/COQ5 methyltransferase family AM408_RS23385 PF02646 RmuC family AM408_RS23390 PF01048 Phosphorylase superfamily AM408_RS23395 PF01738 Dienelactone hydrolase family AM408_RS23400 PF08267 Cobalamin-independent synthase, N-terminal domain AM408_RS23400 PF01717 Cobalamin-independent synthase, Catalytic domain AM408_RS23405 PF03466 LysR substrate binding domain AM408_RS23405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS23410 PF00892 EamA-like transporter family AM408_RS23420 PF12146 Serine aminopeptidase, S33 AM408_RS23425 PF01810 LysE type translocator AM408_RS23430 PF01810 LysE type translocator AM408_RS23435 PF09382 RQC domain AM408_RS23435 PF00270 DEAD/DEAH box helicase AM408_RS23435 PF00271 Helicase conserved C-terminal domain AM408_RS23435 PF00570 HRDC domain AM408_RS23435 PF16124 RecQ zinc-binding AM408_RS23440 PF02253 Phospholipase A1 AM408_RS23445 PF03061 Thioesterase superfamily AM408_RS23450 PF00892 EamA-like transporter family AM408_RS23460 PF10947 Protein of unknown function (DUF2628) AM408_RS23465 PF01544 CorA-like Mg2+ transporter protein AM408_RS23470 PF09992 Phosphodiester glycosidase AM408_RS23475 PF13361 UvrD-like helicase C-terminal domain AM408_RS23475 PF00580 UvrD/REP helicase N-terminal domain AM408_RS23480 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS23485 PF00589 Phage integrase family AM408_RS23485 PF02899 Phage integrase, N-terminal SAM-like domain AM408_RS23490 PF04340 Protein of unknown function, DUF484 AM408_RS23495 PF01678 Diaminopimelate epimerase AM408_RS23500 PF13627 Prokaryotic lipoprotein-attachment site AM408_RS23510 PF01491 Frataxin-like domain AM408_RS23515 PF01295 Adenylate cyclase, class-I AM408_RS23515 PF12633 Adenylate cyclase NT domain AM408_RS23525 PF03900 Porphobilinogen deaminase, C-terminal domain AM408_RS23525 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM408_RS23530 PF02602 Uroporphyrinogen-III synthase HemD AM408_RS23535 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM408_RS23540 PF07719 Tetratricopeptide repeat AM408_RS23540 PF07219 HemY protein N-terminus AM408_RS23545 PF00884 Sulfatase AM408_RS23550 PF04055 Radical SAM superfamily AM408_RS23550 PF13186 Iron-sulfur cluster-binding domain AM408_RS23575 PF00324 Amino acid permease AM408_RS23580 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM408_RS23585 PF06899 WzyE protein, O-antigen assembly polymerase AM408_RS23590 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM408_RS23595 PF01943 Polysaccharide biosynthesis protein AM408_RS23600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM408_RS23610 PF00483 Nucleotidyl transferase AM408_RS23615 PF16363 GDP-mannose 4,6 dehydratase AM408_RS23620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM408_RS23620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM408_RS23620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM408_RS23625 PF02350 UDP-N-acetylglucosamine 2-epimerase AM408_RS23630 PF02706 Chain length determinant protein AM408_RS23635 PF00953 Glycosyl transferase family 4 AM408_RS23645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM408_RS23645 PF07497 Rho termination factor, RNA-binding domain AM408_RS23645 PF07498 Rho termination factor, N-terminal domain AM408_RS23655 PF00085 Thioredoxin AM408_RS23660 PF00270 DEAD/DEAH box helicase AM408_RS23660 PF00271 Helicase conserved C-terminal domain AM408_RS23670 PF02541 Ppx/GppA phosphatase family AM408_RS23675 PF13361 UvrD-like helicase C-terminal domain AM408_RS23675 PF00580 UvrD/REP helicase N-terminal domain AM408_RS23680 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM408_RS23685 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM408_RS23695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM408_RS23695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM408_RS23700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS23700 PF03466 LysR substrate binding domain AM408_RS23705 PF00291 Pyridoxal-phosphate dependent enzyme AM408_RS23705 PF00585 C-terminal regulatory domain of Threonine dehydratase AM408_RS23710 PF00920 Dehydratase family AM408_RS23715 PF01063 Amino-transferase class IV AM408_RS23725 PF00205 Thiamine pyrophosphate enzyme, central domain AM408_RS23725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM408_RS23725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS23730 PF08046 IlvGEDA operon leader peptide AM408_RS23735 PF01078 Magnesium chelatase, subunit ChlI AM408_RS23735 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM408_RS23740 PF04219 Protein of unknown function, DUF AM408_RS23745 PF03466 LysR substrate binding domain AM408_RS23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS23780 PF07729 FCD domain AM408_RS23780 PF00392 Bacterial regulatory proteins, gntR family AM408_RS23785 PF07690 Major Facilitator Superfamily AM408_RS23790 PF00356 Bacterial regulatory proteins, lacI family AM408_RS23795 PF00294 pfkB family carbohydrate kinase AM408_RS23800 PF13407 Periplasmic binding protein domain AM408_RS23805 PF02653 Branched-chain amino acid transport system / permease component AM408_RS23810 PF00005 ABC transporter AM408_RS23815 PF05025 RbsD / FucU transport protein family AM408_RS23820 PF02705 K+ potassium transporter AM408_RS23825 PF07728 AAA domain (dynein-related subfamily) AM408_RS23825 PF17868 AAA lid domain AM408_RS23825 PF12592 Protein of unknown function (DUF3763) AM408_RS23830 PF05762 VWA domain containing CoxE-like protein AM408_RS23835 PF03590 Aspartate-ammonia ligase AM408_RS23840 PF01037 Lrp/AsnC ligand binding domain AM408_RS23845 PF00258 Flavodoxin AM408_RS23850 PF13932 GidA associated domain AM408_RS23850 PF01134 Glucose inhibited division protein A AM408_RS23855 PF02527 rRNA small subunit methyltransferase G AM408_RS23860 PF03899 ATP synthase I chain AM408_RS23865 PF00119 ATP synthase A chain AM408_RS23870 PF00137 ATP synthase subunit C AM408_RS23875 PF00430 ATP synthase B/B' CF(0) AM408_RS23880 PF00213 ATP synthase delta (OSCP) subunit AM408_RS23885 PF00306 ATP synthase alpha/beta chain, C terminal domain AM408_RS23885 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM408_RS23885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM408_RS23890 PF00231 ATP synthase AM408_RS23895 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM408_RS23895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM408_RS23900 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM408_RS23900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM408_RS23905 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS23905 PF14602 Hexapeptide repeat of succinyl-transferase AM408_RS23905 PF12804 MobA-like NTP transferase domain AM408_RS23910 PF01380 SIS domain AM408_RS23915 PF12849 PBP superfamily domain AM408_RS23920 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS23925 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS23930 PF00005 ABC transporter AM408_RS23935 PF01895 PhoU domain AM408_RS23940 PF03123 CAT RNA binding domain AM408_RS23940 PF00874 PRD domain AM408_RS23945 PF02378 Phosphotransferase system, EIIC AM408_RS23945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM408_RS23945 PF00367 phosphotransferase system, EIIB AM408_RS23950 PF00232 Glycosyl hydrolase family 1 AM408_RS23955 PF02264 LamB porin AM408_RS23955 PF11471 Maltoporin periplasmic N-terminal extension AM408_RS23960 PF11471 Maltoporin periplasmic N-terminal extension AM408_RS23960 PF02264 LamB porin AM408_RS23970 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM408_RS23975 PF03691 Uncharacterised protein family (UPF0167) AM408_RS23985 PF05717 IS66 Orf2 like protein AM408_RS23995 PF03691 Uncharacterised protein family (UPF0167) AM408_RS24005 PF13419 Haloacid dehalogenase-like hydrolase AM408_RS24010 PF00860 Permease family AM408_RS24015 PF03358 NADPH-dependent FMN reductase AM408_RS24025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS24025 PF03466 LysR substrate binding domain AM408_RS24030 PF07690 Major Facilitator Superfamily AM408_RS24035 PF03222 Tryptophan/tyrosine permease family AM408_RS24040 PF01212 Beta-eliminating lyase AM408_RS24045 PF08053 Tryptophanase operon leader peptide AM408_RS24050 PF12631 MnmE helical domain AM408_RS24050 PF10396 GTP-binding protein TrmE N-terminus AM408_RS24050 PF01926 50S ribosome-binding GTPase AM408_RS24055 PF02096 60Kd inner membrane protein AM408_RS24055 PF14849 YidC periplasmic domain AM408_RS24060 PF01809 Putative membrane protein insertion efficiency factor AM408_RS24065 PF00825 Ribonuclease P AM408_RS24070 PF00468 Ribosomal protein L34 AM408_RS24080 PF00308 Bacterial dnaA protein AM408_RS24080 PF08299 Bacterial dnaA protein helix-turn-helix AM408_RS24080 PF11638 DnaA N-terminal domain AM408_RS24085 PF00712 DNA polymerase III beta subunit, N-terminal domain AM408_RS24085 PF02768 DNA polymerase III beta subunit, C-terminal domain AM408_RS24085 PF02767 DNA polymerase III beta subunit, central domain AM408_RS24090 PF02463 RecF/RecN/SMC N terminal domain AM408_RS24095 PF01751 Toprim domain AM408_RS24095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS24095 PF00204 DNA gyrase B AM408_RS24095 PF00986 DNA gyrase B subunit, carboxyl terminus AM408_RS24095 PF18053 DNA gyrase B subunit insert domain AM408_RS24100 PF06078 Bacterial protein of unknown function (DUF937) AM408_RS24115 PF00392 Bacterial regulatory proteins, gntR family AM408_RS24115 PF07729 FCD domain AM408_RS24120 PF05035 2-keto-3-deoxy-galactonokinase AM408_RS24125 PF01081 KDPG and KHG aldolase AM408_RS24130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM408_RS24130 PF13378 Enolase C-terminal domain-like AM408_RS24135 PF07690 Major Facilitator Superfamily AM408_RS24140 PF01494 FAD binding domain AM408_RS24145 PF07676 WD40-like Beta Propeller Repeat AM408_RS24145 PF12566 Protein of unknown function (DUF3748) AM408_RS24150 PF07119 Protein of unknown function (DUF1375) AM408_RS24155 PF00011 Hsp20/alpha crystallin family AM408_RS24160 PF00011 Hsp20/alpha crystallin family AM408_RS24165 PF06826 Predicted Permease Membrane Region AM408_RS24165 PF02080 TrkA-C domain AM408_RS24170 PF00392 Bacterial regulatory proteins, gntR family AM408_RS24170 PF07702 UTRA domain AM408_RS24175 PF00367 phosphotransferase system, EIIB AM408_RS24175 PF02378 Phosphotransferase system, EIIC AM408_RS24185 PF02311 AraC-like ligand binding domain AM408_RS24185 PF12833 Helix-turn-helix domain AM408_RS24190 PF00474 Sodium:solute symporter family AM408_RS24195 PF00884 Sulfatase AM408_RS24195 PF16347 Domain of unknown function (DUF4976) AM408_RS24205 PF02656 Domain of unknown function (DUF202) AM408_RS24210 PF02656 Domain of unknown function (DUF202) AM408_RS24220 PF07690 Major Facilitator Superfamily AM408_RS24230 PF13939 Toxin TisB, type I toxin-antitoxin system AM408_RS24245 PF01610 Transposase AM408_RS24245 PF13542 Helix-turn-helix domain of transposase family ISL3 AM408_RS24245 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM408_RS24255 PF08049 IlvB leader peptide AM408_RS24260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM408_RS24260 PF00205 Thiamine pyrophosphate enzyme, central domain AM408_RS24260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM408_RS24265 PF01842 ACT domain AM408_RS24270 PF00196 Bacterial regulatory proteins, luxR family AM408_RS24270 PF00072 Response regulator receiver domain AM408_RS24275 PF05231 MASE1 AM408_RS24275 PF07730 Histidine kinase AM408_RS24275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM408_RS24280 PF07690 Major Facilitator Superfamily AM408_RS24285 PF07690 Major Facilitator Superfamily AM408_RS24290 PF13382 Adenine deaminase C-terminal domain AM408_RS24290 PF01979 Amidohydrolase family AM408_RS24295 PF00860 Permease family AM408_RS24300 PF06711 Protein of unknown function (DUF1198) AM408_RS24310 PF07690 Major Facilitator Superfamily AM408_RS24325 PF03180 NLPA lipoprotein AM408_RS24330 PF00892 EamA-like transporter family AM408_RS24335 PF07690 Major Facilitator Superfamily AM408_RS24355 PF01055 Glycosyl hydrolases family 31 AM408_RS24355 PF13802 Galactose mutarotase-like AM408_RS24360 PF05170 AsmA family AM408_RS24365 PF00860 Permease family AM408_RS24370 PF03616 Sodium/glutamate symporter AM408_RS24375 PF00271 Helicase conserved C-terminal domain AM408_RS24375 PF17191 RecG wedge domain AM408_RS24375 PF00270 DEAD/DEAH box helicase AM408_RS24380 PF12105 SpoU, rRNA methylase, C-terminal AM408_RS24380 PF00588 SpoU rRNA Methylase family AM408_RS24385 PF13291 ACT domain AM408_RS24385 PF02824 TGS domain AM408_RS24385 PF04607 Region found in RelA / SpoT proteins AM408_RS24390 PF01192 RNA polymerase Rpb6 AM408_RS24395 PF00625 Guanylate kinase AM408_RS24400 PF03120 NAD-dependent DNA ligase OB-fold domain AM408_RS24400 PF01653 NAD-dependent DNA ligase adenylation domain AM408_RS24405 PF03458 UPF0126 domain AM408_RS24415 PF01610 Transposase AM408_RS24415 PF13542 Helix-turn-helix domain of transposase family ISL3 AM408_RS24415 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM408_RS24420 PF08340 Domain of unknown function (DUF1732) AM408_RS24420 PF03755 YicC-like family, N-terminal region AM408_RS24430 PF01138 3' exoribonuclease family, domain 1 AM408_RS24430 PF03725 3' exoribonuclease family, domain 2 AM408_RS24435 PF00156 Phosphoribosyl transferase domain AM408_RS24440 PF00440 Bacterial regulatory proteins, tetR family AM408_RS24445 PF00692 dUTPase AM408_RS24450 PF04127 DNA / pantothenate metabolism flavoprotein AM408_RS24450 PF02441 Flavoprotein AM408_RS24455 PF04002 RadC-like JAB domain AM408_RS24460 PF00830 Ribosomal L28 family AM408_RS24465 PF00471 Ribosomal protein L33 AM408_RS24470 PF06827 Zinc finger found in FPG and IleRS AM408_RS24470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM408_RS24470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM408_RS24475 PF01467 Cytidylyltransferase-like AM408_RS24480 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM408_RS24485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM408_RS24490 PF00534 Glycosyl transferases group 1 AM408_RS24490 PF13439 Glycosyltransferase Family 4 AM408_RS24500 PF08437 Glycosyl transferase family 8 C-terminal AM408_RS24500 PF01501 Glycosyl transferase family 8 AM408_RS24505 PF00534 Glycosyl transferases group 1 AM408_RS24505 PF13439 Glycosyltransferase Family 4 AM408_RS24510 PF08437 Glycosyl transferase family 8 C-terminal AM408_RS24510 PF01501 Glycosyl transferase family 8 AM408_RS24515 PF08437 Glycosyl transferase family 8 C-terminal AM408_RS24515 PF01501 Glycosyl transferase family 8 AM408_RS24520 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) AM408_RS24530 PF00534 Glycosyl transferases group 1 AM408_RS24535 PF04932 O-Antigen ligase AM408_RS24540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM408_RS24545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM408_RS24550 PF01370 NAD dependent epimerase/dehydratase family AM408_RS24555 PF00155 Aminotransferase class I and II AM408_RS24560 PF00107 Zinc-binding dehydrogenase AM408_RS24560 PF08240 Alcohol dehydrogenase GroES-like domain AM408_RS24565 PF00535 Glycosyl transferase family 2 AM408_RS24570 PF04748 Divergent polysaccharide deacetylase AM408_RS24575 PF01551 Peptidase family M23 AM408_RS24580 PF01676 Metalloenzyme superfamily AM408_RS24580 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM408_RS24590 PF00581 Rhodanese-like domain AM408_RS24595 PF00462 Glutaredoxin AM408_RS24600 PF02556 Preprotein translocase subunit SecB AM408_RS24605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM408_RS24605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM408_RS24610 PF00132 Bacterial transferase hexapeptide (six repeats) AM408_RS24610 PF06426 Serine acetyltransferase, N-terminal AM408_RS24615 PF00588 SpoU rRNA Methylase family AM408_RS24620 PF01070 FMN-dependent dehydrogenase AM408_RS24625 PF00392 Bacterial regulatory proteins, gntR family AM408_RS24625 PF07729 FCD domain AM408_RS24630 PF02652 L-lactate permease AM408_RS24640 PF10928 Protein of unknown function (DUF2810) AM408_RS24650 PF05068 Mannitol repressor AM408_RS24655 PF08125 Mannitol dehydrogenase C-terminal domain AM408_RS24655 PF01232 Mannitol dehydrogenase Rossmann domain AM408_RS24660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM408_RS24660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM408_RS24660 PF02378 Phosphotransferase system, EIIC AM408_RS24665 PF11742 Protein of unknown function (DUF3302) AM408_RS24670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS24670 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS24675 PF15596 Immunity protein 57 AM408_RS24700 PF03527 RHS protein AM408_RS24715 PF03527 RHS protein AM408_RS24720 PF03130 PBS lyase HEAT-like repeat AM408_RS24725 PF15606 Bacterial toxin 34 AM408_RS24725 PF03527 RHS protein AM408_RS24725 PF05593 RHS Repeat AM408_RS24730 PF13417 Glutathione S-transferase, N-terminal domain AM408_RS24730 PF00043 Glutathione S-transferase, C-terminal domain AM408_RS24735 PF12390 Selenocysteine synthase N terminal AM408_RS24735 PF03841 L-seryl-tRNA selenium transferase AM408_RS24740 PF09107 Elongation factor SelB, winged helix AM408_RS24740 PF09106 Elongation factor SelB, winged helix AM408_RS24740 PF03144 Elongation factor Tu domain 2 AM408_RS24740 PF00009 Elongation factor Tu GTP binding domain AM408_RS24745 PF00465 Iron-containing alcohol dehydrogenase AM408_RS24750 PF00171 Aldehyde dehydrogenase family AM408_RS24760 PF11742 Protein of unknown function (DUF3302) AM408_RS24765 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS24765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS24770 PF03466 LysR substrate binding domain AM408_RS24770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS24775 PF06629 MltA-interacting protein MipA AM408_RS24785 PF00596 Class II Aldolase and Adducin N-terminal domain AM408_RS24790 PF01261 Xylose isomerase-like TIM barrel AM408_RS24795 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM408_RS24800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS24800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS24805 PF03480 Bacterial extracellular solute-binding protein, family 7 AM408_RS24810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM408_RS24815 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM408_RS24820 PF04074 YhcH/YjgK/YiaL AM408_RS24825 PF02615 Malate/L-lactate dehydrogenase AM408_RS24830 PF09339 IclR helix-turn-helix domain AM408_RS24830 PF01614 Bacterial transcriptional regulator AM408_RS24835 PF13247 4Fe-4S dicluster domain AM408_RS24840 PF00155 Aminotransferase class I and II AM408_RS24845 PF00128 Alpha amylase, catalytic domain AM408_RS24850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM408_RS24855 PF12833 Helix-turn-helix domain AM408_RS24860 PF02653 Branched-chain amino acid transport system / permease component AM408_RS24865 PF00005 ABC transporter AM408_RS24870 PF13407 Periplasmic binding protein domain AM408_RS24880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM408_RS24880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM408_RS24885 PF05360 yiaA/B two helix domain AM408_RS24890 PF05360 yiaA/B two helix domain AM408_RS24895 PF01757 Acyltransferase family AM408_RS24900 PF13983 YsaB-like lipoprotein AM408_RS24905 PF02091 Glycyl-tRNA synthetase alpha subunit AM408_RS24910 PF05746 DALR anticodon binding domain AM408_RS24910 PF02092 Glycyl-tRNA synthetase beta subunit AM408_RS24920 PF01848 Hok/gef family AM408_RS24925 PF00313 'Cold-shock' DNA-binding domain AM408_RS24930 PF01381 Helix-turn-helix AM408_RS24935 PF11254 Protein of unknown function (DUF3053) AM408_RS24940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM408_RS24940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM408_RS24945 PF13488 Glycine zipper AM408_RS24945 PF00691 OmpA family AM408_RS24950 PF18364 Molybdopterin oxidoreductase N-terminal domain AM408_RS24950 PF00384 Molybdopterin oxidoreductase AM408_RS24950 PF01568 Molydopterin dinucleotide binding domain AM408_RS24955 PF00583 Acetyltransferase (GNAT) family AM408_RS24960 PF03352 Methyladenine glycosylase AM408_RS24965 PF03797 Autotransporter beta-domain AM408_RS24975 PF07690 Major Facilitator Superfamily AM408_RS24980 PF00884 Sulfatase AM408_RS24980 PF08019 Phosphoethanolamine transferase EptA/EptB AM408_RS24995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS25005 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS25010 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS25010 PF12911 N-terminal TM domain of oligopeptide transport permease C AM408_RS25015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS25015 PF00005 ABC transporter AM408_RS25020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM408_RS25020 PF00005 ABC transporter AM408_RS25025 PF03222 Tryptophan/tyrosine permease family AM408_RS25040 PF13940 Toxin Ldr, type I toxin-antitoxin system AM408_RS25045 PF11658 Cellulose biosynthesis protein BcsG AM408_RS25050 PF11120 Cellulose biosynthesis protein BcsF AM408_RS25055 PF10995 Cellulose biosynthesis GIL AM408_RS25060 PF10945 Cellulose biosynthesis protein BcsR AM408_RS25065 PF06564 Cellulose biosynthesis protein BcsQ AM408_RS25070 PF06564 Cellulose biosynthesis protein BcsQ AM408_RS25075 PF07238 PilZ domain AM408_RS25075 PF03552 Cellulose synthase AM408_RS25075 PF00535 Glycosyl transferase family 2 AM408_RS25080 PF03170 Bacterial cellulose synthase subunit AM408_RS25085 PF01270 Glycosyl hydrolases family 8 AM408_RS25090 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM408_RS25095 PF00563 EAL domain AM408_RS25095 PF17154 Gammaproteobacterial periplasmic sensor domain AM408_RS25095 PF00990 Diguanylate cyclase, GGDEF domain AM408_RS25095 PF00672 HAMP domain AM408_RS25105 PF00375 Sodium:dicarboxylate symporter family AM408_RS25115 PF05193 Peptidase M16 inactive domain AM408_RS25115 PF00675 Insulinase (Peptidase family M16) AM408_RS25120 PF00294 pfkB family carbohydrate kinase AM408_RS25130 PF00563 EAL domain AM408_RS25135 PF05170 AsmA family AM408_RS25140 PF07690 Major Facilitator Superfamily AM408_RS25140 PF00083 Sugar (and other) transporter AM408_RS25145 PF03631 Virulence factor BrkB AM408_RS25150 PF03466 LysR substrate binding domain AM408_RS25150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM408_RS25155 PF00196 Bacterial regulatory proteins, luxR family AM408_RS25160 PF01204 Trehalase AM408_RS25165 PF00034 Cytochrome c AM408_RS25165 PF03150 Di-haem cytochrome c peroxidase AM408_RS25165 PF14376 Haem-binding domain AM408_RS25170 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM408_RS25175 PF12833 Helix-turn-helix domain AM408_RS25180 PF12833 Helix-turn-helix domain AM408_RS25190 PF00873 AcrB/AcrD/AcrF family AM408_RS25195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM408_RS25195 PF00529 HlyD membrane-fusion protein of T1SS AM408_RS25205 PF00196 Bacterial regulatory proteins, luxR family AM408_RS25210 PF03729 Short repeat of unknown function (DUF308) AM408_RS25215 PF06411 HdeA/HdeB family AM408_RS25220 PF06411 HdeA/HdeB family AM408_RS25225 PF02308 MgtC family AM408_RS25230 PF00196 Bacterial regulatory proteins, luxR family AM408_RS25240 PF03843 Outer membrane lipoprotein Slp family AM408_RS25250 PF03960 ArsC family AM408_RS25255 PF02040 Arsenical pump membrane protein AM408_RS25260 PF01022 Bacterial regulatory protein, arsR family AM408_RS25275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM408_RS25275 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM408_RS25280 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM408_RS25285 PF01432 Peptidase family M3 AM408_RS25290 PF04445 Putative SAM-dependent methyltransferase AM408_RS25295 PF00854 POT family AM408_RS25305 PF00582 Universal stress protein family AM408_RS25310 PF10625 Universal stress protein B (UspB) AM408_RS25315 PF01384 Phosphate transporter family AM408_RS25325 PF10951 Protein of unknown function (DUF2776) AM408_RS25335 PF13258 Domain of unknown function (DUF4049) AM408_RS25340 PF13258 Domain of unknown function (DUF4049) AM408_RS25345 PF13533 Biotin-lipoyl like AM408_RS25350 PF00005 ABC transporter AM408_RS25360 PF13808 DDE_Tnp_1-associated AM408_RS25360 PF01609 Transposase DDE domain AM408_RS25365 PF03130 PBS lyase HEAT-like repeat AM408_RS25370 PF15631 NTF2 fold immunity protein AM408_RS25375 PF14220 Domain of unknown function (DUF4329) AM408_RS25375 PF05593 RHS Repeat AM408_RS25375 PF03527 RHS protein AM408_RS25380 PF01402 Ribbon-helix-helix protein, copG family AM408_RS25380 PF08753 NikR C terminal nickel binding domain AM408_RS25385 PF00005 ABC transporter AM408_RS25390 PF00005 ABC transporter AM408_RS25395 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS25400 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS25405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM408_RS25410 PF01648 4'-phosphopantetheinyl transferase superfamily AM408_RS25415 PF01594 AI-2E family transporter AM408_RS25420 PF07690 Major Facilitator Superfamily AM408_RS25425 PF08786 DcrB AM408_RS25430 PF02592 Putative vitamin uptake transporter AM408_RS25435 PF01206 Sulfurtransferase TusA AM408_RS25440 PF00403 Heavy-metal-associated domain AM408_RS25445 PF07947 YhhN family AM408_RS25450 PF10694 Protein of unknown function (DUF2500) AM408_RS25455 PF06611 Protein of unknown function (DUF1145) AM408_RS25465 PF02881 SRP54-type protein, helical bundle domain AM408_RS25465 PF00448 SRP54-type protein, GTPase domain AM408_RS25470 PF00005 ABC transporter AM408_RS25475 PF02687 FtsX-like permease family AM408_RS25475 PF18075 FtsX extracellular domain AM408_RS25480 PF04545 Sigma-70, region 4 AM408_RS25480 PF04542 Sigma-70 region 2 AM408_RS25485 PF13458 Periplasmic binding protein AM408_RS25490 PF12568 Acetyltransferase (GNAT) domain, PanZ AM408_RS25500 PF13458 Periplasmic binding protein AM408_RS25505 PF02653 Branched-chain amino acid transport system / permease component AM408_RS25510 PF11862 Domain of unknown function (DUF3382) AM408_RS25510 PF02653 Branched-chain amino acid transport system / permease component AM408_RS25515 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM408_RS25515 PF00005 ABC transporter AM408_RS25520 PF00005 ABC transporter AM408_RS25525 PF13416 Bacterial extracellular solute-binding protein AM408_RS25530 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS25535 PF00528 Binding-protein-dependent transport system inner membrane component AM408_RS25540 PF00005 ABC transporter AM408_RS25540 PF17912 MalK OB fold domain AM408_RS25545 PF03009 Glycerophosphoryl diester phosphodiesterase family AM408_RS25560 PF15567 Immunity protein 35 AM408_RS25575 PF05638 Type VI secretion system effector, Hcp AM408_RS25580 PF00583 Acetyltransferase (GNAT) family AM408_RS25590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM408_RS25590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM408_RS25595 PF17954 Quercetinase C-terminal cupin domain AM408_RS25595 PF02678 Pirin AM408_RS25600 PF00356 Bacterial regulatory proteins, lacI family AM408_RS25600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM408_RS25605 PF01202 Shikimate kinase AM408_RS25610 PF02447 GntP family permease AM408_RS25615 PF01914 MarC family integral membrane protein AM408_RS25620 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM408_RS25620 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM408_RS25625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM408_RS25625 PF00128 Alpha amylase, catalytic domain AM408_RS25625 PF02806 Alpha amylase, C-terminal all-beta domain AM408_RS25630 PF00128 Alpha amylase, catalytic domain AM408_RS25630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM408_RS25630 PF18390 Glycogen debranching enzyme C-terminal domain AM408_RS25635 PF00483 Nucleotidyl transferase AM408_RS25640 PF00534 Glycosyl transferases group 1 AM408_RS25640 PF08323 Starch synthase catalytic domain AM408_RS25645 PF00343 Carbohydrate phosphorylase AM408_RS25660 PF01266 FAD dependent oxidoreductase AM408_RS25660 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM408_RS25665 PF00581 Rhodanese-like domain AM408_RS25670 PF01694 Rhomboid family AM408_RS25670 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM408_RS25675 PF00455 DeoR C terminal sensor domain AM408_RS25675 PF08220 DeoR-like helix-turn-helix domain AM408_RS25680 PF00158 Sigma-54 interaction domain AM408_RS25680 PF06956 Regulator of RNA terminal phosphate cyclase AM408_RS25685 PF01139 tRNA-splicing ligase RtcB AM408_RS25690 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM408_RS25690 PF07057 DNA helicase TraI AM408_RS25690 PF18340 DNA relaxase TraI 2B/2B-like domain AM408_RS25690 PF08751 TrwC relaxase AM408_RS25695 PF05857 TraX protein AM408_RS25700 PF00561 alpha/beta hydrolase fold AM408_RS25705 PF04352 ProQ/FINO family AM408_RS25705 PF12602 Fertility inhibition protein N terminal AM408_RS25715 PF00565 Staphylococcal nuclease homologue AM408_RS25720 PF05321 Haemolysin expression modulating protein AM408_RS25730 PF10723 Replication regulatory protein RepB AM408_RS25740 PF08048 Tap RepA1 leader peptide AM408_RS25745 PF02387 IncFII RepA protein family AM408_RS25755 PF02517 CPBP intramembrane metalloprotease AM408_RS25760 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM408_RS25775 PF01526 Tn3 transposase DDE domain AM408_RS25775 PF13700 Domain of unknown function (DUF4158) AM408_RS25785 PF13610 DDE domain AM408_RS25795 PF00118 TCP-1/cpn60 chaperonin family AM408_RS25805 PF00398 Ribosomal RNA adenine dimethylase AM408_RS25810 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) AM408_RS25820 PF13610 DDE domain AM408_RS25830 PF01636 Phosphotransferase enzyme family AM408_RS25850 PF13610 DDE domain AM408_RS25855 PF00239 Resolvase, N terminal domain AM408_RS25855 PF02796 Helix-turn-helix domain of resolvase AM408_RS25865 PF01526 Tn3 transposase DDE domain AM408_RS25865 PF13700 Domain of unknown function (DUF4158) AM408_RS25870 PF00239 Resolvase, N terminal domain AM408_RS25870 PF02796 Helix-turn-helix domain of resolvase AM408_RS25875 PF13610 DDE domain AM408_RS25880 PF03400 IS1 transposase AM408_RS25905 PF10784 Plasmid stability protein AM408_RS25910 PF06406 StbA protein AM408_RS25925 PF01555 DNA methylase AM408_RS25935 PF07128 Protein of unknown function (DUF1380) AM408_RS25945 PF07339 Protein of unknown function (DUF1472) AM408_RS25950 PF03230 Antirestriction protein AM408_RS25955 PF07128 Protein of unknown function (DUF1380) AM408_RS26015 PF01348 Type II intron maturase AM408_RS26015 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM408_RS26020 PF00436 Single-strand binding protein family AM408_RS26025 PF06006 Bacterial protein of unknown function (DUF905) AM408_RS26035 PF06290 Plasmid SOS inhibition protein (PsiB) AM408_RS26040 PF06952 PsiA protein AM408_RS26050 PF01848 Hok/gef family AM408_RS26075 PF06067 Domain of unknown function (DUF932) AM408_RS26085 PF03050 Transposase IS66 family AM408_RS26085 PF13817 IS66 C-terminal element AM408_RS26085 PF13007 Transposase C of IS166 homeodomain AM408_RS26085 PF13005 zinc-finger binding domain of transposase IS66 AM408_RS26090 PF05717 IS66 Orf2 like protein AM408_RS26095 PF01527 Transposase AM408_RS26095 PF00665 Integrase core domain AM408_RS26095 PF13276 HTH-like domain AM408_RS26100 PF01464 Transglycosylase SLT domain AM408_RS26105 PF05261 TraM protein, DNA-binding AM408_RS26115 PF05509 TraY domain AM408_RS26120 PF05513 TraA AM408_RS26125 PF07178 TraL protein AM408_RS26130 PF05309 TraE protein AM408_RS26135 PF06586 TraK protein AM408_RS26140 PF03743 Bacterial conjugation TrbI-like protein AM408_RS26145 PF07296 TraP protein AM408_RS26150 PF10894 Protein of unknown function (DUF2689) AM408_RS26155 PF09676 Type IV conjugative transfer system lipoprotein (TraV) AM408_RS26160 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM408_RS26180 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer AM408_RS26185 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) AM408_RS26190 PF12477 Sex factor F TraW protein N terminal AM408_RS26195 PF06834 TraU protein AM408_RS26205 PF09673 Type-F conjugative transfer system pilin assembly protein AM408_RS26210 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM408_RS26215 PF11100 Conjugal transfer protein TrbE AM408_RS26220 PF13728 F plasmid transfer operon protein AM408_RS26230 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) AM408_RS26235 PF13728 F plasmid transfer operon protein AM408_RS26250 PF06122 Conjugative relaxosome accessory transposon protein AM408_RS26255 PF07916 TraG-like protein, N-terminal region AM408_RS26265 PF00665 Integrase core domain AM408_RS26270 PF01695 IstB-like ATP binding protein AM408_RS26275 PF05818 Enterobacterial TraT complement resistance protein AM408_RS26285 PF10412 Type IV secretion-system coupling protein DNA-binding domain AM408_RS26285 PF12615 F sex factor protein N terminal