AM408_RS00045	SM00965	Secretin and TonB N terminus short domain
AM408_RS00065	SM00382	ATPases associated with a variety of cellular activities
AM408_RS00245	SM00387	Histidine kinase-like ATPases
AM408_RS00245	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS00245	SM00448	cheY-homologous receiver domain
AM408_RS00260	SM00448	cheY-homologous receiver domain
AM408_RS00285	SM00382	ATPases associated with a variety of cellular activities
AM408_RS00345	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM408_RS00345	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM408_RS00345	SM00493	AM408_RS00345
AM408_RS00350	SM00528	Domain in histone-like proteins of HNS family
AM408_RS00365	SM00155	Phospholipase D. Active site motifs.
AM408_RS00410	SM00470	ParB-like nuclease domain
AM408_RS00605	SM00857	Resolvase, N terminal domain
AM408_RS00615	SM00857	Resolvase, N terminal domain
AM408_RS00655	SM00857	Resolvase, N terminal domain
AM408_RS00745	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM408_RS00790	SM00271	DnaJ molecular chaperone homology domain
AM408_RS00835	SM00857	Resolvase, N terminal domain
AM408_RS00885	SM00849	Metallo-beta-lactamase superfamily
AM408_RS00910	SM00857	Resolvase, N terminal domain
AM408_RS00970	SM00528	Domain in histone-like proteins of HNS family
AM408_RS00975	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM408_RS00975	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM408_RS00975	SM00493	AM408_RS00975
AM408_RS00980	SM00382	ATPases associated with a variety of cellular activities
AM408_RS00985	SM00318	Staphylococcal nuclease homologues
AM408_RS00995	SM00421	helix_turn_helix, Lux Regulon
AM408_RS01050	SM00899	AM408_RS01050
AM408_RS01060	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS01060	SM00732	Likely ribonuclease with RNase H fold.
AM408_RS01075	SM00448	cheY-homologous receiver domain
AM408_RS01075	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS01080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS01080	SM00387	Histidine kinase-like ATPases
AM408_RS01080	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS01105	SM00363	S4 RNA-binding domain
AM408_RS01150	SM00965	Secretin and TonB N terminus short domain
AM408_RS01235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS01235	SM00866	AM408_RS01235
AM408_RS01325	SM00100	Cyclic nucleotide-monophosphate binding domain
AM408_RS01325	SM00419	helix_turn_helix, cAMP Regulatory protein
AM408_RS01355	SM00382	ATPases associated with a variety of cellular activities
AM408_RS01425	SM00838	Elongation factor G C-terminus
AM408_RS01425	SM00889	Elongation factor G, domain IV
AM408_RS01440	SM00495	Chitin-binding domain type 3
AM408_RS01500	SM00382	ATPases associated with a variety of cellular activities
AM408_RS01530	SM01403	AM408_RS01530
AM408_RS01550	SM01382	AM408_RS01550
AM408_RS01550	SM01383	AM408_RS01550
AM408_RS01565	SM00322	K homology RNA-binding domain
AM408_RS01585	SM01374	AM408_RS01585
AM408_RS01590	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM408_RS01655	SM00363	S4 RNA-binding domain
AM408_RS01655	SM01390	AM408_RS01655
AM408_RS01660	SM00662	RNA polymerases D
AM408_RS01675	SM00422	helix_turn_helix, mercury resistance
AM408_RS01780	SM00382	ATPases associated with a variety of cellular activities
AM408_RS01795	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS01865	SM00878	Biotin carboxylase C-terminal domain
AM408_RS01880	SM00829	Enoylreductase
AM408_RS01885	SM00052	Putative diguanylate phosphodiesterase
AM408_RS01885	SM00267	diguanylate cyclase
AM408_RS01920	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS01975	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM408_RS01980	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM408_RS02030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS02030	SM00895	AM408_RS02030
AM408_RS02035	SM01130	AM408_RS02035
AM408_RS02145	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS02150	SM00073	Histidine Phosphotransfer domain
AM408_RS02150	SM00091	PAS domain
AM408_RS02150	SM00387	Histidine kinase-like ATPases
AM408_RS02150	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS02150	SM00448	cheY-homologous receiver domain
AM408_RS02195	SM00382	ATPases associated with a variety of cellular activities
AM408_RS02225	SM00382	ATPases associated with a variety of cellular activities
AM408_RS02300	SM01103	AM408_RS02300
AM408_RS02310	SM00382	ATPases associated with a variety of cellular activities
AM408_RS02360	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS02380	SM01387	AM408_RS02380
AM408_RS02385	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS02385	SM00322	K homology RNA-binding domain
AM408_RS02390	SM00028	Tetratricopeptide repeats
AM408_RS02395	SM00487	DEAD-like helicases superfamily
AM408_RS02395	SM00490	helicase superfamily c-terminal domain
AM408_RS02430	SM00465	GIY-YIG type nucleases (URI domain)
AM408_RS02445	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM408_RS02455	SM00749	bacterial OsmY and nodulation domain
AM408_RS02575	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS02575	SM01134	AM408_RS02575
AM408_RS02590	SM00858	AM408_RS02590
AM408_RS02765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS02765	SM00895	AM408_RS02765
AM408_RS02780	SM00858	AM408_RS02780
AM408_RS02830	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS02860	SM01038	Beta galactosidase small chain
AM408_RS02865	SM00354	helix_turn _helix lactose operon repressor
AM408_RS02890	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM408_RS02890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM408_RS02930	SM00400	zinc finger
AM408_RS02930	SM00493	AM408_RS02930
AM408_RS02930	SM00766	DNA primase DnaG DnaB-binding
AM408_RS02975	SM01207	AM408_RS02975
AM408_RS02980	SM00905	Dihydroneopterin aldolase
AM408_RS02995	SM00287	Bacterial SH3 domain homologues
AM408_RS03005	SM01118	AM408_RS03005
AM408_RS03025	SM00244	prohibitin homologues
AM408_RS03135	SM00387	Histidine kinase-like ATPases
AM408_RS03135	SM00433	TopoisomeraseII
AM408_RS03160	SM00387	Histidine kinase-like ATPases
AM408_RS03160	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS03165	SM00448	cheY-homologous receiver domain
AM408_RS03165	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS03175	SM00871	Bacterial transcription activator, effector binding domain
AM408_RS03185	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS03195	SM00434	DNA Topoisomerase IV
AM408_RS03200	SM00563	Phosphate acyltransferases
AM408_RS03210	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS03235	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS03420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS03420	SM00895	AM408_RS03420
AM408_RS03460	SM01276	AM408_RS03460
AM408_RS03485	SM00382	ATPases associated with a variety of cellular activities
AM408_RS03705	SM00877	AM408_RS03705
AM408_RS03715	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS03715	SM00448	cheY-homologous receiver domain
AM408_RS03765	SM00877	AM408_RS03765
AM408_RS03775	SM00877	AM408_RS03775
AM408_RS03780	SM00877	AM408_RS03780
AM408_RS03875	SM00470	ParB-like nuclease domain
AM408_RS03895	SM00487	DEAD-like helicases superfamily
AM408_RS03895	SM00490	helicase superfamily c-terminal domain
AM408_RS03965	SM00478	endonuclease III
AM408_RS03965	SM00525	AM408_RS03965
AM408_RS03990	SM00870	AM408_RS03990
AM408_RS04000	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS04010	SM01152	AM408_RS04010
AM408_RS04025	SM00382	ATPases associated with a variety of cellular activities
AM408_RS04030	SM00732	Likely ribonuclease with RNase H fold.
AM408_RS04055	SM00731	SprT homologues.
AM408_RS04100	SM00861	Transketolase, pyrimidine binding domain
AM408_RS04140	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM408_RS04255	SM01011	Aminopeptidase P, N-terminal domain
AM408_RS04295	SM01022	AM408_RS04295
AM408_RS04395	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM408_RS04400	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM408_RS04455	SM00091	PAS domain
AM408_RS04455	SM00382	ATPases associated with a variety of cellular activities
AM408_RS04465	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM408_RS04470	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM408_RS04480	SM00257	Lysin motif
AM408_RS04500	SM00382	ATPases associated with a variety of cellular activities
AM408_RS04580	SM00421	helix_turn_helix, Lux Regulon
AM408_RS04625	SM00421	helix_turn_helix, Lux Regulon
AM408_RS04645	SM00028	Tetratricopeptide repeats
AM408_RS04645	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS04685	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS04735	SM00354	helix_turn _helix lactose operon repressor
AM408_RS04740	SM00563	Phosphate acyltransferases
AM408_RS04765	SM00927	DNA mismatch repair enzyme MutH
AM408_RS04775	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM408_RS04825	SM00382	ATPases associated with a variety of cellular activities
AM408_RS04835	SM00646	AM408_RS04835
AM408_RS04860	SM00925	MltA specific insert domain
AM408_RS04900	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS04900	SM01134	AM408_RS04900
AM408_RS04925	SM01007	Class II Aldolase and Adducin N-terminal domain
AM408_RS04935	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM408_RS04935	SM00475	5'-3' exonuclease
AM408_RS04985	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM408_RS04990	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM408_RS04995	SM00073	Histidine Phosphotransfer domain
AM408_RS04995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS04995	SM00387	Histidine kinase-like ATPases
AM408_RS04995	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS04995	SM00448	cheY-homologous receiver domain
AM408_RS05005	SM00954	Region found in RelA / SpoT proteins
AM408_RS05010	SM00966	SpoVT / AbrB like domain 
AM408_RS05030	SM01192	AM408_RS05030
AM408_RS05030	SM01193	AM408_RS05030
AM408_RS05075	SM00893	Electron transfer flavoprotein domain
AM408_RS05120	SM00487	DEAD-like helicases superfamily
AM408_RS05120	SM00490	helicase superfamily c-terminal domain
AM408_RS05145	SM01101	AM408_RS05145
AM408_RS05215	SM00257	Lysin motif
AM408_RS05235	SM01007	Class II Aldolase and Adducin N-terminal domain
AM408_RS05250	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS05250	SM01134	AM408_RS05250
AM408_RS05260	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AM408_RS05260	SM00534	ATPase domain of DNA mismatch repair MUTS family
AM408_RS05270	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM408_RS05270	SM00382	ATPases associated with a variety of cellular activities
AM408_RS05360	SM00354	helix_turn _helix lactose operon repressor
AM408_RS05380	SM00849	Metallo-beta-lactamase superfamily
AM408_RS05385	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM408_RS05385	SM00382	ATPases associated with a variety of cellular activities
AM408_RS05395	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS05395	SM01134	AM408_RS05395
AM408_RS05435	SM00382	ATPases associated with a variety of cellular activities
AM408_RS05445	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM408_RS05510	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM408_RS05540	SM00382	ATPases associated with a variety of cellular activities
AM408_RS05585	SM00528	Domain in histone-like proteins of HNS family
AM408_RS05590	SM00450	Rhodanese Homology Domain
AM408_RS05595	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM408_RS05605	SM00257	Lysin motif
AM408_RS05605	SM00749	bacterial OsmY and nodulation domain
AM408_RS05610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS05610	SM00895	AM408_RS05610
AM408_RS05740	SM01091	Transporter associated domain
AM408_RS05750	SM00382	ATPases associated with a variety of cellular activities
AM408_RS05750	SM00962	SRP54-type protein, GTPase domain
AM408_RS05750	SM00963	SRP54-type protein, helical bundle domain
AM408_RS05780	SM00267	diguanylate cyclase
AM408_RS05800	SM00830	Chorismate mutase type II
AM408_RS05805	SM00830	Chorismate mutase type II
AM408_RS05825	SM00363	S4 RNA-binding domain
AM408_RS05835	SM00382	ATPases associated with a variety of cellular activities
AM408_RS05835	SM01086	C-terminal, D2-small domain, of ClpB protein
AM408_RS05875	SM00155	Phospholipase D. Active site motifs.
AM408_RS05880	SM00881	CoA binding domain
AM408_RS05885	SM01144	AM408_RS05885
AM408_RS05900	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM408_RS05905	SM00986	Uracil DNA glycosylase superfamily
AM408_RS05905	SM00987	UreE urease accessory protein, C-terminal domain 
AM408_RS05925	SM00487	DEAD-like helicases superfamily
AM408_RS05925	SM00490	helicase superfamily c-terminal domain
AM408_RS05975	SM00358	Double-stranded RNA binding motif
AM408_RS05975	SM00535	Ribonuclease III family
AM408_RS06035	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS06045	SM01211	AM408_RS06045
AM408_RS06050	SM00387	Histidine kinase-like ATPases
AM408_RS06050	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS06060	SM00382	ATPases associated with a variety of cellular activities
AM408_RS06060	SM00448	cheY-homologous receiver domain
AM408_RS06065	SM00938	Nitrogen regulatory protein P-II
AM408_RS06085	SM00028	Tetratricopeptide repeats
AM408_RS06095	SM00382	ATPases associated with a variety of cellular activities
AM408_RS06105	SM00829	Enoylreductase
AM408_RS06195	SM00271	DnaJ molecular chaperone homology domain
AM408_RS06225	SM00450	Rhodanese Homology Domain
AM408_RS06230	SM01359	AM408_RS06230
AM408_RS06230	SM01360	AM408_RS06230
AM408_RS06240	SM00562	AM408_RS06240
AM408_RS06250	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS06270	SM00564	beta-propeller repeat
AM408_RS06290	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM408_RS06290	SM01240	AM408_RS06290
AM408_RS06325	SM00052	Putative diguanylate phosphodiesterase
AM408_RS06325	SM00267	diguanylate cyclase
AM408_RS06390	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM408_RS06390	SM00382	ATPases associated with a variety of cellular activities
AM408_RS06455	SM01130	AM408_RS06455
AM408_RS06510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS06510	SM00387	Histidine kinase-like ATPases
AM408_RS06530	SM00861	Transketolase, pyrimidine binding domain
AM408_RS06545	SM00919	Malic enzyme, NAD binding domain
AM408_RS06545	SM01274	AM408_RS06545
AM408_RS06550	SM00877	AM408_RS06550
AM408_RS06575	SM00877	AM408_RS06575
AM408_RS06620	SM00877	AM408_RS06620
AM408_RS06625	SM00877	AM408_RS06625
AM408_RS06630	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS06640	SM00646	AM408_RS06640
AM408_RS06685	SM00822	AM408_RS06685
AM408_RS06710	SM00382	ATPases associated with a variety of cellular activities
AM408_RS06720	SM00773	Proposed nucleic acid binding domain
AM408_RS06760	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AM408_RS06765	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM408_RS06765	SM00292	breast cancer carboxy-terminal domain
AM408_RS06765	SM00532	Ligase N family
AM408_RS06855	SM00052	Putative diguanylate phosphodiesterase
AM408_RS06855	SM00267	diguanylate cyclase
AM408_RS06920	SM00448	cheY-homologous receiver domain
AM408_RS06920	SM00850	LytTr DNA-binding domain
AM408_RS06925	SM00387	Histidine kinase-like ATPases
AM408_RS06980	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS06980	SM00073	Histidine Phosphotransfer domain
AM408_RS06980	SM00387	Histidine kinase-like ATPases
AM408_RS06980	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS06980	SM00448	cheY-homologous receiver domain
AM408_RS06985	SM00421	helix_turn_helix, Lux Regulon
AM408_RS06985	SM00448	cheY-homologous receiver domain
AM408_RS07010	SM00354	helix_turn _helix lactose operon repressor
AM408_RS07015	SM00640	Glycosyl hydrolases family 32
AM408_RS07130	SM00463	Small MutS-related domain
AM408_RS07170	SM00825	Beta-ketoacyl synthase
AM408_RS07195	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM408_RS07240	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS07245	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS07260	SM00382	ATPases associated with a variety of cellular activities
AM408_RS07275	SM00905	Dihydroneopterin aldolase
AM408_RS07335	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM408_RS07375	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AM408_RS07380	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS07380	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AM408_RS07445	SM00327	von Willebrand factor (vWF) type A domain
AM408_RS07455	SM00849	Metallo-beta-lactamase superfamily
AM408_RS07490	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM408_RS07555	SM00852	Probable molybdopterin binding domain
AM408_RS07560	SM00346	helix_turn_helix isocitrate lyase regulation
AM408_RS07570	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM408_RS07655	SM00869	Autotransporter beta-domain
AM408_RS07665	SM00434	DNA Topoisomerase IV
AM408_RS07680	SM01359	AM408_RS07680
AM408_RS07680	SM01360	AM408_RS07680
AM408_RS07705	SM00882	Coenzyme A transferase
AM408_RS07710	SM00882	Coenzyme A transferase
AM408_RS07715	SM00382	ATPases associated with a variety of cellular activities
AM408_RS07715	SM00448	cheY-homologous receiver domain
AM408_RS07720	SM00091	PAS domain
AM408_RS07720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS07720	SM00387	Histidine kinase-like ATPases
AM408_RS07720	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS07725	SM00387	Histidine kinase-like ATPases
AM408_RS07725	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS07725	SM00448	cheY-homologous receiver domain
AM408_RS07730	SM00421	helix_turn_helix, Lux Regulon
AM408_RS07730	SM00448	cheY-homologous receiver domain
AM408_RS07735	SM00387	Histidine kinase-like ATPases
AM408_RS07760	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS07770	SM00382	ATPases associated with a variety of cellular activities
AM408_RS07800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS07825	SM00382	ATPases associated with a variety of cellular activities
AM408_RS07865	SM00421	helix_turn_helix, Lux Regulon
AM408_RS07865	SM00448	cheY-homologous receiver domain
AM408_RS07875	SM00869	Autotransporter beta-domain
AM408_RS07905	SM00487	DEAD-like helicases superfamily
AM408_RS07905	SM00490	helicase superfamily c-terminal domain
AM408_RS07915	SM00363	S4 RNA-binding domain
AM408_RS07935	SM00382	ATPases associated with a variety of cellular activities
AM408_RS07955	SM00052	Putative diguanylate phosphodiesterase
AM408_RS07965	SM00014	Acid phosphatase homologues
AM408_RS07970	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM408_RS07980	SM00841	Elongation factor P, C-terminal
AM408_RS07980	SM01185	AM408_RS07980
AM408_RS08025	SM00100	Cyclic nucleotide-monophosphate binding domain
AM408_RS08045	SM00518	AP endonuclease family 2
AM408_RS08110	SM00354	helix_turn _helix lactose operon repressor
AM408_RS08120	SM00382	ATPases associated with a variety of cellular activities
AM408_RS08220	SM01217	AM408_RS08220
AM408_RS08235	SM00382	ATPases associated with a variety of cellular activities
AM408_RS08250	SM00422	helix_turn_helix, mercury resistance
AM408_RS08255	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM408_RS08260	SM00448	cheY-homologous receiver domain
AM408_RS08260	SM00850	LytTr DNA-binding domain
AM408_RS08280	SM00327	von Willebrand factor (vWF) type A domain
AM408_RS08305	SM00773	Proposed nucleic acid binding domain
AM408_RS08310	SM00773	Proposed nucleic acid binding domain
AM408_RS08380	SM00641	Glycosyl hydrolases family 25
AM408_RS08385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS08385	SM00866	AM408_RS08385
AM408_RS08405	SM01133	AM408_RS08405
AM408_RS08435	SM00829	Enoylreductase
AM408_RS08440	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS08440	SM01134	AM408_RS08440
AM408_RS08445	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AM408_RS08480	SM00448	cheY-homologous receiver domain
AM408_RS08480	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS08485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS08485	SM00387	Histidine kinase-like ATPases
AM408_RS08485	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS08515	SM00327	von Willebrand factor (vWF) type A domain
AM408_RS08535	SM00478	endonuclease III
AM408_RS08535	SM01009	AlkA N-terminal domain
AM408_RS08560	SM01091	Transporter associated domain
AM408_RS08570	SM00014	Acid phosphatase homologues
AM408_RS08585	SM00226	Low molecular weight phosphatase family
AM408_RS08610	SM00710	Parallel beta-helix repeats
AM408_RS08640	SM01350	AM408_RS08640
AM408_RS08665	SM00984	UDP binding domain
AM408_RS08770	SM00479	AM408_RS08770
AM408_RS08780	SM00871	Bacterial transcription activator, effector binding domain
AM408_RS08840	SM00382	ATPases associated with a variety of cellular activities
AM408_RS09100	SM00095	Transthyretin
AM408_RS09105	SM00448	cheY-homologous receiver domain
AM408_RS09105	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS09110	SM00387	Histidine kinase-like ATPases
AM408_RS09110	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS09135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM408_RS09195	SM00421	helix_turn_helix, Lux Regulon
AM408_RS09245	SM00382	ATPases associated with a variety of cellular activities
AM408_RS09300	SM00642	Alpha-amylase domain
AM408_RS09335	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS09335	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM408_RS09350	SM00382	ATPases associated with a variety of cellular activities
AM408_RS09355	SM00421	helix_turn_helix, Lux Regulon
AM408_RS09365	SM00421	helix_turn_helix, Lux Regulon
AM408_RS09365	SM00448	cheY-homologous receiver domain
AM408_RS09370	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM408_RS09370	SM00465	GIY-YIG type nucleases (URI domain)
AM408_RS09450	SM00382	ATPases associated with a variety of cellular activities
AM408_RS09495	SM00073	Histidine Phosphotransfer domain
AM408_RS09495	SM00260	Two component signalling adaptor domain
AM408_RS09495	SM00387	Histidine kinase-like ATPases
AM408_RS09495	SM01231	AM408_RS09495
AM408_RS09500	SM00260	Two component signalling adaptor domain
AM408_RS09505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM408_RS09505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS09505	SM00319	Homologues of the ligand binding domain of Tar
AM408_RS09510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM408_RS09510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS09510	SM00319	Homologues of the ligand binding domain of Tar
AM408_RS09515	SM00138	Methyltransferase, chemotaxis proteins 
AM408_RS09520	SM00448	cheY-homologous receiver domain
AM408_RS09525	SM00448	cheY-homologous receiver domain
AM408_RS09555	SM00836	DALR anticodon binding domain
AM408_RS09555	SM01016	Arginyl tRNA synthetase N terminal dom
AM408_RS09640	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM408_RS09645	SM00382	ATPases associated with a variety of cellular activities
AM408_RS09655	SM00382	ATPases associated with a variety of cellular activities
AM408_RS09665	SM00257	Lysin motif
AM408_RS09730	SM00479	AM408_RS09730
AM408_RS09790	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM408_RS09795	SM00945	ProQ/FINO family
AM408_RS09800	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM408_RS09800	SM00245	tail specific protease
AM408_RS09815	SM00346	helix_turn_helix isocitrate lyase regulation
AM408_RS09845	SM00357	Cold shock protein domain
AM408_RS09895	SM01091	Transporter associated domain
AM408_RS09900	SM00052	Putative diguanylate phosphodiesterase
AM408_RS09935	SM00487	DEAD-like helicases superfamily
AM408_RS09935	SM00491	AM408_RS09935
AM408_RS09955	SM00341	Helicase and RNase D C-terminal
AM408_RS09955	SM00474	3'-5' exonuclease
AM408_RS09975	SM01329	AM408_RS09975
AM408_RS10015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM408_RS10015	SM00267	diguanylate cyclase
AM408_RS10035	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS10055	SM00267	diguanylate cyclase
AM408_RS10060	SM00267	diguanylate cyclase
AM408_RS10070	SM00763	PrkA AAA domain
AM408_RS10090	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM408_RS10115	SM00829	Enoylreductase
AM408_RS10135	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS10135	SM01134	AM408_RS10135
AM408_RS10160	SM00870	AM408_RS10160
AM408_RS10190	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM408_RS10190	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM408_RS10190	SM00493	AM408_RS10190
AM408_RS10200	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AM408_RS10220	SM00450	Rhodanese Homology Domain
AM408_RS10225	SM00382	ATPases associated with a variety of cellular activities
AM408_RS10305	SM00465	GIY-YIG type nucleases (URI domain)
AM408_RS10340	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS10355	SM01060	AM408_RS10355
AM408_RS10425	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM408_RS10450	SM00873	B3/4 domain
AM408_RS10450	SM00874	tRNA synthetase B5 domain
AM408_RS10450	SM00896	Ferredoxin-fold anticodon binding domain
AM408_RS10455	SM00411	bacterial (prokaryotic) histone like domain
AM408_RS10470	SM00382	ATPases associated with a variety of cellular activities
AM408_RS10530	SM00893	Electron transfer flavoprotein domain
AM408_RS10535	SM00893	Electron transfer flavoprotein domain
AM408_RS10545	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS10555	SM00882	Coenzyme A transferase
AM408_RS10625	SM00382	ATPases associated with a variety of cellular activities
AM408_RS10645	SM00257	Lysin motif
AM408_RS10670	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
AM408_RS10745	SM00354	helix_turn _helix lactose operon repressor
AM408_RS10780	SM00382	ATPases associated with a variety of cellular activities
AM408_RS10780	SM00487	DEAD-like helicases superfamily
AM408_RS10780	SM00490	helicase superfamily c-terminal domain
AM408_RS10785	SM00479	AM408_RS10785
AM408_RS10835	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM408_RS10860	SM00363	S4 RNA-binding domain
AM408_RS10885	SM00478	endonuclease III
AM408_RS10885	SM00525	AM408_RS10885
AM408_RS10895	SM00900	AM408_RS10895
AM408_RS10960	SM00354	helix_turn _helix lactose operon repressor
AM408_RS11015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS11015	SM00387	Histidine kinase-like ATPases
AM408_RS11015	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS11020	SM00448	cheY-homologous receiver domain
AM408_RS11020	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS11050	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AM408_RS11050	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AM408_RS11140	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS11145	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS11180	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM408_RS11205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS11205	SM00895	AM408_RS11205
AM408_RS11235	SM00267	diguanylate cyclase
AM408_RS11260	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS11265	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM408_RS11305	SM00267	diguanylate cyclase
AM408_RS11340	SM01133	AM408_RS11340
AM408_RS11360	SM00382	ATPases associated with a variety of cellular activities
AM408_RS11375	SM00869	Autotransporter beta-domain
AM408_RS11380	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS11430	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS11445	SM00382	ATPases associated with a variety of cellular activities
AM408_RS11475	SM00267	diguanylate cyclase
AM408_RS11480	SM00052	Putative diguanylate phosphodiesterase
AM408_RS11480	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM408_RS11480	SM00091	PAS domain
AM408_RS11480	SM00267	diguanylate cyclase
AM408_RS11505	SM00382	ATPases associated with a variety of cellular activities
AM408_RS11510	SM00382	ATPases associated with a variety of cellular activities
AM408_RS11535	SM00919	Malic enzyme, NAD binding domain
AM408_RS11535	SM01274	AM408_RS11535
AM408_RS11540	SM00829	Enoylreductase
AM408_RS11545	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS11590	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS11625	SM00903	Flavin reductase like domain
AM408_RS11700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS11700	SM00895	AM408_RS11700
AM408_RS11705	SM00829	Enoylreductase
AM408_RS11760	SM00382	ATPases associated with a variety of cellular activities
AM408_RS11770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS11775	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS11795	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS11860	SM01150	AM408_RS11860
AM408_RS11870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM408_RS11870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS11870	SM00319	Homologues of the ligand binding domain of Tar
AM408_RS11895	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM408_RS11915	SM00382	ATPases associated with a variety of cellular activities
AM408_RS11915	SM00487	DEAD-like helicases superfamily
AM408_RS11915	SM00490	helicase superfamily c-terminal domain
AM408_RS11915	SM00847	Helicase associated domain (HA2)  Add an annotation
AM408_RS11925	SM00195	Dual specificity phosphatase, catalytic domain
AM408_RS11925	SM00404	Protein tyrosine phosphatase, catalytic domain motif
AM408_RS12060	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS12095	SM00890	Domain of unknown function
AM408_RS12120	SM00487	DEAD-like helicases superfamily
AM408_RS12120	SM00490	helicase superfamily c-terminal domain
AM408_RS12135	SM00091	PAS domain
AM408_RS12135	SM00267	diguanylate cyclase
AM408_RS12140	SM00463	Small MutS-related domain
AM408_RS12180	SM00100	Cyclic nucleotide-monophosphate binding domain
AM408_RS12180	SM00419	helix_turn_helix, cAMP Regulatory protein
AM408_RS12225	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM408_RS12235	SM00091	PAS domain
AM408_RS12235	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12250	SM00354	helix_turn _helix lactose operon repressor
AM408_RS12260	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12305	SM00642	Alpha-amylase domain
AM408_RS12310	SM00450	Rhodanese Homology Domain
AM408_RS12335	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12360	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS12370	SM01230	AM408_RS12370
AM408_RS12405	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12410	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12430	SM00357	Cold shock protein domain
AM408_RS12430	SM00955	AM408_RS12430
AM408_RS12440	SM00052	Putative diguanylate phosphodiesterase
AM408_RS12440	SM00091	PAS domain
AM408_RS12440	SM00267	diguanylate cyclase
AM408_RS12450	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS12450	SM01134	AM408_RS12450
AM408_RS12465	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM408_RS12470	SM00028	Tetratricopeptide repeats
AM408_RS12480	SM00014	Acid phosphatase homologues
AM408_RS12530	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM408_RS12530	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM408_RS12530	SM00493	AM408_RS12530
AM408_RS12550	SM00822	AM408_RS12550
AM408_RS12560	SM00363	S4 RNA-binding domain
AM408_RS12575	SM00481	DNA polymerase alpha chain like domain
AM408_RS12670	SM00155	Phospholipase D. Active site motifs.
AM408_RS12680	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12685	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12730	SM00528	Domain in histone-like proteins of HNS family
AM408_RS12740	SM00448	cheY-homologous receiver domain
AM408_RS12805	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS12820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS12820	SM00387	Histidine kinase-like ATPases
AM408_RS12825	SM00421	helix_turn_helix, Lux Regulon
AM408_RS12825	SM00448	cheY-homologous receiver domain
AM408_RS12900	SM00937	AM408_RS12900
AM408_RS12920	SM01400	AM408_RS12920
AM408_RS12955	SM00869	Autotransporter beta-domain
AM408_RS12960	SM00091	PAS domain
AM408_RS12960	SM00382	ATPases associated with a variety of cellular activities
AM408_RS12970	SM01120	AM408_RS12970
AM408_RS13020	SM01091	Transporter associated domain
AM408_RS13025	SM01005	Alanine racemase, C-terminal domain
AM408_RS13040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS13165	SM00052	Putative diguanylate phosphodiesterase
AM408_RS13190	SM00052	Putative diguanylate phosphodiesterase
AM408_RS13190	SM01034	Sensors of blue-light using FAD
AM408_RS13195	SM00422	helix_turn_helix, mercury resistance
AM408_RS13210	SM01329	AM408_RS13210
AM408_RS13240	SM00448	cheY-homologous receiver domain
AM408_RS13240	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS13245	SM00387	Histidine kinase-like ATPases
AM408_RS13250	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AM408_RS13265	SM00382	ATPases associated with a variety of cellular activities
AM408_RS13340	SM00060	Fibronectin type 3 domain
AM408_RS13350	SM00232	JAB/MPN domain
AM408_RS13430	SM00507	HNH nucleases
AM408_RS13510	SM00382	ATPases associated with a variety of cellular activities
AM408_RS13525	SM00507	HNH nucleases
AM408_RS13660	SM00382	ATPases associated with a variety of cellular activities
AM408_RS13675	SM00487	DEAD-like helicases superfamily
AM408_RS13675	SM00490	helicase superfamily c-terminal domain
AM408_RS13675	SM00982	AM408_RS13675
AM408_RS13675	SM01058	CarD-like/TRCF domain
AM408_RS13680	SM00257	Lysin motif
AM408_RS13775	SM00825	Beta-ketoacyl synthase
AM408_RS13785	SM00822	AM408_RS13785
AM408_RS13790	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM408_RS13820	SM00363	S4 RNA-binding domain
AM408_RS13835	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS13850	SM00047	Lysozyme subfamily 2
AM408_RS13895	SM00858	AM408_RS13895
AM408_RS13975	SM00867	YceI-like domain 
AM408_RS13980	SM00450	Rhodanese Homology Domain
AM408_RS14030	SM00155	Phospholipase D. Active site motifs.
AM408_RS14035	SM00506	Appr-1"-p processing enzyme
AM408_RS14070	SM00421	helix_turn_helix, Lux Regulon
AM408_RS14100	SM00481	DNA polymerase alpha chain like domain
AM408_RS14135	SM00267	diguanylate cyclase
AM408_RS14140	SM00028	Tetratricopeptide repeats
AM408_RS14245	SM00903	Flavin reductase like domain
AM408_RS14285	SM00271	DnaJ molecular chaperone homology domain
AM408_RS14310	SM00448	cheY-homologous receiver domain
AM408_RS14310	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS14320	SM00073	Histidine Phosphotransfer domain
AM408_RS14320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS14320	SM00387	Histidine kinase-like ATPases
AM408_RS14320	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS14320	SM00448	cheY-homologous receiver domain
AM408_RS14345	SM00357	Cold shock protein domain
AM408_RS14350	SM00357	Cold shock protein domain
AM408_RS14380	SM00226	Low molecular weight phosphatase family
AM408_RS14460	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM408_RS14465	SM00992	Hemimethylated DNA-binding protein YccV like
AM408_RS14470	SM00881	CoA binding domain
AM408_RS14480	SM00851	MGS-like domain
AM408_RS14555	SM00382	ATPases associated with a variety of cellular activities
AM408_RS14560	SM00981	AM408_RS14560
AM408_RS14625	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS14640	SM00382	ATPases associated with a variety of cellular activities
AM408_RS14680	SM00849	Metallo-beta-lactamase superfamily
AM408_RS14755	SM00382	ATPases associated with a variety of cellular activities
AM408_RS14760	SM00849	Metallo-beta-lactamase superfamily
AM408_RS14765	SM00411	bacterial (prokaryotic) histone like domain
AM408_RS14770	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS14855	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS14865	SM00382	ATPases associated with a variety of cellular activities
AM408_RS14875	SM00843	AM408_RS14875
AM408_RS14880	SM00344	helix_turn_helix ASNC type
AM408_RS14895	SM00382	ATPases associated with a variety of cellular activities
AM408_RS14900	SM00382	ATPases associated with a variety of cellular activities
AM408_RS14915	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS14925	SM00382	ATPases associated with a variety of cellular activities
AM408_RS14925	SM01086	C-terminal, D2-small domain, of ClpB protein
AM408_RS14935	SM00357	Cold shock protein domain
AM408_RS14940	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15005	SM00644	AM408_RS15005
AM408_RS15020	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15025	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS15025	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM408_RS15040	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS15040	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM408_RS15065	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15140	SM00014	Acid phosphatase homologues
AM408_RS15145	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS15145	SM01134	AM408_RS15145
AM408_RS15150	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM408_RS15170	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS15175	SM00267	diguanylate cyclase
AM408_RS15200	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15210	SM00852	Probable molybdopterin binding domain
AM408_RS15245	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15260	SM00529	Helix-turn-helix diphteria tox regulatory element
AM408_RS15305	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS15305	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM408_RS15315	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15340	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM408_RS15365	SM00487	DEAD-like helicases superfamily
AM408_RS15365	SM00488	AM408_RS15365
AM408_RS15365	SM00491	AM408_RS15365
AM408_RS15380	SM00487	DEAD-like helicases superfamily
AM408_RS15380	SM00490	helicase superfamily c-terminal domain
AM408_RS15395	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15420	SM00155	Phospholipase D. Active site motifs.
AM408_RS15455	SM00852	Probable molybdopterin binding domain
AM408_RS15460	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS15470	SM00487	DEAD-like helicases superfamily
AM408_RS15470	SM00490	helicase superfamily c-terminal domain
AM408_RS15490	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS15490	SM00876	Biotin and Thiamin Synthesis associated domain
AM408_RS15545	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15575	SM00382	ATPases associated with a variety of cellular activities
AM408_RS15600	SM00855	Phosphoglycerate mutase family
AM408_RS15735	SM00872	Alpha mannosidase, middle domain
AM408_RS15745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS15745	SM00866	AM408_RS15745
AM408_RS15750	SM00881	CoA binding domain
AM408_RS15765	SM00861	Transketolase, pyrimidine binding domain
AM408_RS15830	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM408_RS15830	SM01232	AM408_RS15830
AM408_RS15840	SM00797	Allophanate hydrolase subunit 2
AM408_RS15845	SM00796	Allophanate hydrolase subunit 1
AM408_RS15930	SM00387	Histidine kinase-like ATPases
AM408_RS15930	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS15935	SM00448	cheY-homologous receiver domain
AM408_RS15935	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS16105	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS16120	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM408_RS16120	SM01091	Transporter associated domain
AM408_RS16130	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS16145	SM00382	ATPases associated with a variety of cellular activities
AM408_RS16170	SM00671	Sel1-like repeats.
AM408_RS16175	SM00271	DnaJ molecular chaperone homology domain
AM408_RS16185	SM00671	Sel1-like repeats.
AM408_RS16215	SM00855	Phosphoglycerate mutase family
AM408_RS16245	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM408_RS16275	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS16300	SM00357	Cold shock protein domain
AM408_RS16320	SM00448	cheY-homologous receiver domain
AM408_RS16325	SM00091	PAS domain
AM408_RS16325	SM00387	Histidine kinase-like ATPases
AM408_RS16330	SM00764	Citrate lyase ligase C-terminal domain
AM408_RS16425	SM00470	ParB-like nuclease domain
AM408_RS16455	SM00822	AM408_RS16455
AM408_RS16500	SM00382	ATPases associated with a variety of cellular activities
AM408_RS16510	SM00823	Phosphopantetheine attachment site
AM408_RS16510	SM00824	Thioesterase
AM408_RS16515	SM00923	MbtH-like protein
AM408_RS16620	SM00382	ATPases associated with a variety of cellular activities
AM408_RS16705	SM00448	cheY-homologous receiver domain
AM408_RS16705	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS16710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS16710	SM00387	Histidine kinase-like ATPases
AM408_RS16710	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS16720	SM00028	Tetratricopeptide repeats
AM408_RS16735	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS16750	SM00421	helix_turn_helix, Lux Regulon
AM408_RS16750	SM00448	cheY-homologous receiver domain
AM408_RS16795	SM00840	AM408_RS16795
AM408_RS16815	SM01001	AIR carboxylase
AM408_RS16895	SM00346	helix_turn_helix isocitrate lyase regulation
AM408_RS16910	SM00450	Rhodanese Homology Domain
AM408_RS16945	SM00382	ATPases associated with a variety of cellular activities
AM408_RS16955	SM00822	AM408_RS16955
AM408_RS16970	SM00382	ATPases associated with a variety of cellular activities
AM408_RS16975	SM00244	prohibitin homologues
AM408_RS16985	SM00422	helix_turn_helix, mercury resistance
AM408_RS17010	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS17075	SM00387	Histidine kinase-like ATPases
AM408_RS17080	SM00493	AM408_RS17080
AM408_RS17090	SM00382	ATPases associated with a variety of cellular activities
AM408_RS17155	SM01266	AM408_RS17155
AM408_RS17165	SM00052	Putative diguanylate phosphodiesterase
AM408_RS17200	SM00938	Nitrogen regulatory protein P-II
AM408_RS17205	SM00382	ATPases associated with a variety of cellular activities
AM408_RS17210	SM00382	ATPases associated with a variety of cellular activities
AM408_RS17215	SM00344	helix_turn_helix ASNC type
AM408_RS17240	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM408_RS17250	SM00411	bacterial (prokaryotic) histone like domain
AM408_RS17255	SM00382	ATPases associated with a variety of cellular activities
AM408_RS17255	SM00464	Found in ATP-dependent protease La (LON)
AM408_RS17260	SM00382	ATPases associated with a variety of cellular activities
AM408_RS17260	SM00994	ClpX C4-type zinc finger
AM408_RS17260	SM01086	C-terminal, D2-small domain, of ClpB protein
AM408_RS17345	SM00981	AM408_RS17345
AM408_RS17360	SM00861	Transketolase, pyrimidine binding domain
AM408_RS17410	SM00507	HNH nucleases
AM408_RS17425	SM01323	AM408_RS17425
AM408_RS17445	SM00642	Alpha-amylase domain
AM408_RS17460	SM00091	PAS domain
AM408_RS17460	SM00387	Histidine kinase-like ATPases
AM408_RS17460	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS17465	SM00448	cheY-homologous receiver domain
AM408_RS17465	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS17540	SM00267	diguanylate cyclase
AM408_RS17550	SM00098	Alkaline phosphatase homologues
AM408_RS17605	SM00869	Autotransporter beta-domain
AM408_RS17615	SM01004	Delta-aminolevulinic acid dehydratase
AM408_RS17630	SM00382	ATPases associated with a variety of cellular activities
AM408_RS17635	SM00062	Bacterial periplasmic substrate-binding proteins
AM408_RS17685	SM00829	Enoylreductase
AM408_RS17710	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM408_RS17735	SM00346	helix_turn_helix isocitrate lyase regulation
AM408_RS17740	SM00354	helix_turn _helix lactose operon repressor
AM408_RS17750	SM01038	Beta galactosidase small chain
AM408_RS17760	SM01266	AM408_RS17760
AM408_RS17770	SM01116	AM408_RS17770
AM408_RS17775	SM00947	Carbonic anhydrase
AM408_RS17815	SM00382	ATPases associated with a variety of cellular activities
AM408_RS17840	SM00829	Enoylreductase
AM408_RS17875	SM00248	ankyrin repeats
AM408_RS17895	SM00052	Putative diguanylate phosphodiesterase
AM408_RS17895	SM00421	helix_turn_helix, Lux Regulon
AM408_RS17965	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS17985	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS17985	SM00871	Bacterial transcription activator, effector binding domain
AM408_RS17990	SM00634	Bacterial Ig-like domain (group 1)
AM408_RS18030	SM00421	helix_turn_helix, Lux Regulon
AM408_RS18085	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM408_RS18090	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM408_RS18330	SM00382	ATPases associated with a variety of cellular activities
AM408_RS18350	SM01133	AM408_RS18350
AM408_RS18480	SM00060	Fibronectin type 3 domain
AM408_RS18490	SM00232	JAB/MPN domain
AM408_RS18520	SM00635	Bacterial Ig-like domain 2
AM408_RS18620	SM00507	HNH nucleases
AM408_RS18625	SM01252	AM408_RS18625
AM408_RS18665	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS18675	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS18735	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM408_RS18810	SM01321	AM408_RS18810
AM408_RS18940	SM00382	ATPases associated with a variety of cellular activities
AM408_RS18940	SM01086	C-terminal, D2-small domain, of ClpB protein
AM408_RS18990	SM00479	AM408_RS18990
AM408_RS19005	SM00849	Metallo-beta-lactamase superfamily
AM408_RS19010	SM00257	Lysin motif
AM408_RS19070	SM00382	ATPases associated with a variety of cellular activities
AM408_RS19070	SM00930	AM408_RS19070
AM408_RS19115	SM01322	AM408_RS19115
AM408_RS19130	SM00977	TilS substrate C-terminal domain
AM408_RS19150	SM00481	DNA polymerase alpha chain like domain
AM408_RS19180	SM00935	Outer membrane protein (OmpH-like)
AM408_RS19190	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM408_RS19245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM408_RS19270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM408_RS19280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM408_RS19325	SM00382	ATPases associated with a variety of cellular activities
AM408_RS19345	SM00487	DEAD-like helicases superfamily
AM408_RS19345	SM00490	helicase superfamily c-terminal domain
AM408_RS19345	SM00847	Helicase associated domain (HA2)  Add an annotation
AM408_RS19460	SM00382	ATPases associated with a variety of cellular activities
AM408_RS19465	SM00947	Carbonic anhydrase
AM408_RS19475	SM00564	beta-propeller repeat
AM408_RS19540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS19540	SM00895	AM408_RS19540
AM408_RS19555	SM00644	AM408_RS19555
AM408_RS19585	SM01240	AM408_RS19585
AM408_RS19610	SM00957	SecA DEAD-like domain
AM408_RS19610	SM00958	SecA preprotein cross-linking domain
AM408_RS19625	SM00864	Tubulin/FtsZ family, GTPase domain
AM408_RS19625	SM00865	Tubulin/FtsZ family, C-terminal domain
AM408_RS19630	SM00842	Cell division protein FtsA
AM408_RS19705	SM00354	helix_turn _helix lactose operon repressor
AM408_RS19735	SM00917	LeuA allosteric (dimerisation) domain
AM408_RS19740	SM01329	AM408_RS19740
AM408_RS19780	SM00382	ATPases associated with a variety of cellular activities
AM408_RS19790	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS19810	SM01007	Class II Aldolase and Adducin N-terminal domain
AM408_RS19815	SM00486	DNA polymerase type-B family
AM408_RS19820	SM00487	DEAD-like helicases superfamily
AM408_RS19820	SM00490	helicase superfamily c-terminal domain
AM408_RS19835	SM00271	DnaJ molecular chaperone homology domain
AM408_RS19855	SM00650	Ribosomal RNA adenine dimethylases
AM408_RS19900	SM00893	Electron transfer flavoprotein domain
AM408_RS19905	SM00893	Electron transfer flavoprotein domain
AM408_RS19950	SM00851	MGS-like domain
AM408_RS19950	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AM408_RS19955	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AM408_RS19995	SM00904	Riboflavin kinase
AM408_RS20050	SM00271	DnaJ molecular chaperone homology domain
AM408_RS20075	SM00852	Probable molybdopterin binding domain
AM408_RS20130	SM00448	cheY-homologous receiver domain
AM408_RS20130	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS20140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS20140	SM00387	Histidine kinase-like ATPases
AM408_RS20140	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS20145	SM00448	cheY-homologous receiver domain
AM408_RS20145	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS20155	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS20155	SM00871	Bacterial transcription activator, effector binding domain
AM408_RS20160	SM00855	Phosphoglycerate mutase family
AM408_RS20185	SM00382	ATPases associated with a variety of cellular activities
AM408_RS20190	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS20195	SM00382	ATPases associated with a variety of cellular activities
AM408_RS20225	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AM408_RS20230	SM01133	AM408_RS20230
AM408_RS20260	SM00749	bacterial OsmY and nodulation domain
AM408_RS20315	SM00421	helix_turn_helix, Lux Regulon
AM408_RS20320	SM00421	helix_turn_helix, Lux Regulon
AM408_RS20340	SM00382	ATPases associated with a variety of cellular activities
AM408_RS20355	SM00829	Enoylreductase
AM408_RS20360	SM00895	AM408_RS20360
AM408_RS20370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM408_RS20370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS20370	SM00319	Homologues of the ligand binding domain of Tar
AM408_RS20390	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM408_RS20485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS20485	SM00895	AM408_RS20485
AM408_RS20615	SM00965	Secretin and TonB N terminus short domain
AM408_RS20635	SM00382	ATPases associated with a variety of cellular activities
AM408_RS20785	SM00493	AM408_RS20785
AM408_RS20785	SM00778	Zinc-binding domain of primase-helicase
AM408_RS20830	SM00829	Enoylreductase
AM408_RS20905	SM00822	AM408_RS20905
AM408_RS20940	SM00831	Cation transporter/ATPase, N-terminus
AM408_RS20945	SM00354	helix_turn _helix lactose operon repressor
AM408_RS20955	SM00642	Alpha-amylase domain
AM408_RS21005	SM00382	ATPases associated with a variety of cellular activities
AM408_RS21025	SM00966	SpoVT / AbrB like domain 
AM408_RS21055	SM01091	Transporter associated domain
AM408_RS21140	SM01321	AM408_RS21140
AM408_RS21185	SM01007	Class II Aldolase and Adducin N-terminal domain
AM408_RS21195	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM408_RS21220	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS21220	SM01134	AM408_RS21220
AM408_RS21280	SM00858	AM408_RS21280
AM408_RS21290	SM01130	AM408_RS21290
AM408_RS21295	SM00346	helix_turn_helix isocitrate lyase regulation
AM408_RS21300	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM408_RS21305	SM00316	Ribosomal protein S1-like RNA-binding domain
AM408_RS21305	SM00357	Cold shock protein domain
AM408_RS21305	SM00955	AM408_RS21305
AM408_RS21315	SM00788	Adenylosuccinate synthetase
AM408_RS21325	SM00244	prohibitin homologues
AM408_RS21330	SM00244	prohibitin homologues
AM408_RS21350	SM00853	MutL C terminal dimerisation domain
AM408_RS21350	SM01340	AM408_RS21350
AM408_RS21355	SM00646	AM408_RS21355
AM408_RS21390	SM00479	AM408_RS21390
AM408_RS21480	SM00841	Elongation factor P, C-terminal
AM408_RS21480	SM01185	AM408_RS21480
AM408_RS21505	SM00883	Chaperonin 10 Kd subunit
AM408_RS21555	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS21605	SM00091	PAS domain
AM408_RS21605	SM00387	Histidine kinase-like ATPases
AM408_RS21610	SM00448	cheY-homologous receiver domain
AM408_RS21645	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS21655	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS21670	SM00448	cheY-homologous receiver domain
AM408_RS21670	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS21675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS21675	SM00387	Histidine kinase-like ATPases
AM408_RS21675	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS21715	SM00382	ATPases associated with a variety of cellular activities
AM408_RS21730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS21730	SM00866	AM408_RS21730
AM408_RS21755	SM00382	ATPases associated with a variety of cellular activities
AM408_RS21760	SM00382	ATPases associated with a variety of cellular activities
AM408_RS21770	SM00072	Guanylate kinase homologues.
AM408_RS21810	SM00382	ATPases associated with a variety of cellular activities
AM408_RS21830	SM00849	Metallo-beta-lactamase superfamily
AM408_RS21860	SM00671	Sel1-like repeats.
AM408_RS21875	SM00028	Tetratricopeptide repeats
AM408_RS21960	SM00422	helix_turn_helix, mercury resistance
AM408_RS21965	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS21970	SM00052	Putative diguanylate phosphodiesterase
AM408_RS21995	SM00382	ATPases associated with a variety of cellular activities
AM408_RS22060	SM01005	Alanine racemase, C-terminal domain
AM408_RS22065	SM00382	ATPases associated with a variety of cellular activities
AM408_RS22070	SM00829	Enoylreductase
AM408_RS22120	SM00563	Phosphate acyltransferases
AM408_RS22160	SM00382	ATPases associated with a variety of cellular activities
AM408_RS22245	SM00363	S4 RNA-binding domain
AM408_RS22260	SM01018	B12 binding domain
AM408_RS22265	SM00346	helix_turn_helix isocitrate lyase regulation
AM408_RS22270	SM00248	ankyrin repeats
AM408_RS22330	SM00798	AICARFT/IMPCHase bienzyme
AM408_RS22330	SM00851	MGS-like domain
AM408_RS22335	SM01209	AM408_RS22335
AM408_RS22335	SM01210	AM408_RS22335
AM408_RS22340	SM00382	ATPases associated with a variety of cellular activities
AM408_RS22340	SM00448	cheY-homologous receiver domain
AM408_RS22345	SM00387	Histidine kinase-like ATPases
AM408_RS22345	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS22365	SM00411	bacterial (prokaryotic) histone like domain
AM408_RS22420	SM00876	Biotin and Thiamin Synthesis associated domain
AM408_RS22430	SM00663	RNA polymerase I subunit A N-terminus
AM408_RS22460	SM00649	Ribosomal protein L11/L12
AM408_RS22465	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM408_RS22465	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM408_RS22595	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM408_RS22620	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS22710	SM00487	DEAD-like helicases superfamily
AM408_RS22710	SM00490	helicase superfamily c-terminal domain
AM408_RS22715	SM00354	helix_turn _helix lactose operon repressor
AM408_RS22730	SM00382	ATPases associated with a variety of cellular activities
AM408_RS22730	SM01086	C-terminal, D2-small domain, of ClpB protein
AM408_RS22870	SM00857	Resolvase, N terminal domain
AM408_RS22905	SM00382	ATPases associated with a variety of cellular activities
AM408_RS22950	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS22965	SM00448	cheY-homologous receiver domain
AM408_RS22965	SM00862	Transcriptional regulatory protein, C terminal
AM408_RS22970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM408_RS22970	SM00387	Histidine kinase-like ATPases
AM408_RS22970	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS23000	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS23005	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS23020	SM01007	Class II Aldolase and Adducin N-terminal domain
AM408_RS23065	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM408_RS23120	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS23120	SM01134	AM408_RS23120
AM408_RS23135	SM01133	AM408_RS23135
AM408_RS23180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS23180	SM00866	AM408_RS23180
AM408_RS23195	SM01230	AM408_RS23195
AM408_RS23200	SM00091	PAS domain
AM408_RS23200	SM00387	Histidine kinase-like ATPases
AM408_RS23200	SM00388	His Kinase A (phosphoacceptor) domain
AM408_RS23205	SM00382	ATPases associated with a variety of cellular activities
AM408_RS23205	SM00448	cheY-homologous receiver domain
AM408_RS23215	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM408_RS23235	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM408_RS23235	SM00474	3'-5' exonuclease
AM408_RS23235	SM00475	5'-3' exonuclease
AM408_RS23235	SM00482	DNA polymerase A domain
AM408_RS23245	SM00563	Phosphate acyltransferases
AM408_RS23345	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM408_RS23435	SM00341	Helicase and RNase D C-terminal
AM408_RS23435	SM00487	DEAD-like helicases superfamily
AM408_RS23435	SM00490	helicase superfamily c-terminal domain
AM408_RS23435	SM00956	AM408_RS23435
AM408_RS23510	SM01219	AM408_RS23510
AM408_RS23620	SM00984	UDP binding domain
AM408_RS23645	SM00357	Cold shock protein domain
AM408_RS23645	SM00382	ATPases associated with a variety of cellular activities
AM408_RS23645	SM00959	Rho termination factor, N-terminal domain
AM408_RS23660	SM00487	DEAD-like helicases superfamily
AM408_RS23660	SM00490	helicase superfamily c-terminal domain
AM408_RS23735	SM00382	ATPases associated with a variety of cellular activities
AM408_RS23780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS23780	SM00895	AM408_RS23780
AM408_RS23790	SM00354	helix_turn _helix lactose operon repressor
AM408_RS23810	SM00382	ATPases associated with a variety of cellular activities
AM408_RS23825	SM00382	ATPases associated with a variety of cellular activities
AM408_RS23830	SM00327	von Willebrand factor (vWF) type A domain
AM408_RS23840	SM00344	helix_turn_helix ASNC type
AM408_RS23850	SM01228	AM408_RS23850
AM408_RS23895	SM00382	ATPases associated with a variety of cellular activities
AM408_RS23930	SM00382	ATPases associated with a variety of cellular activities
AM408_RS23940	SM01061	CAT RNA binding domain
AM408_RS24060	SM01234	AM408_RS24060
AM408_RS24080	SM00382	ATPases associated with a variety of cellular activities
AM408_RS24080	SM00760	Bacterial dnaA protein helix-turn-helix domain
AM408_RS24085	SM00480	DNA polymerase III beta subunit
AM408_RS24095	SM00387	Histidine kinase-like ATPases
AM408_RS24095	SM00433	TopoisomeraseII
AM408_RS24115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS24115	SM00895	AM408_RS24115
AM408_RS24130	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM408_RS24170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS24170	SM00866	AM408_RS24170
AM408_RS24185	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS24270	SM00421	helix_turn_helix, Lux Regulon
AM408_RS24270	SM00448	cheY-homologous receiver domain
AM408_RS24275	SM00387	Histidine kinase-like ATPases
AM408_RS24375	SM00487	DEAD-like helicases superfamily
AM408_RS24375	SM00490	helicase superfamily c-terminal domain
AM408_RS24385	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM408_RS24385	SM00954	Region found in RelA / SpoT proteins
AM408_RS24390	SM01409	AM408_RS24390
AM408_RS24395	SM00072	Guanylate kinase homologues.
AM408_RS24400	SM00532	Ligase N family
AM408_RS24470	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM408_RS24470	SM01232	AM408_RS24470
AM408_RS24560	SM00829	Enoylreductase
AM408_RS24590	SM00450	Rhodanese Homology Domain
AM408_RS24610	SM00971	Serine acetyltransferase, N-terminal
AM408_RS24625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM408_RS24625	SM00895	AM408_RS24625
AM408_RS24785	SM01007	Class II Aldolase and Adducin N-terminal domain
AM408_RS24795	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM408_RS24830	SM00346	helix_turn_helix isocitrate lyase regulation
AM408_RS24845	SM00642	Alpha-amylase domain
AM408_RS24850	SM00047	Lysozyme subfamily 2
AM408_RS24855	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS24865	SM00382	ATPases associated with a variety of cellular activities
AM408_RS24925	SM00357	Cold shock protein domain
AM408_RS24930	SM00530	Helix-turn-helix XRE-family like proteins 
AM408_RS25015	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25020	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25090	SM00028	Tetratricopeptide repeats
AM408_RS25095	SM00052	Putative diguanylate phosphodiesterase
AM408_RS25095	SM00267	diguanylate cyclase
AM408_RS25130	SM00052	Putative diguanylate phosphodiesterase
AM408_RS25155	SM00421	helix_turn_helix, Lux Regulon
AM408_RS25165	SM01235	AM408_RS25165
AM408_RS25175	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS25180	SM00342	helix_turn_helix, arabinose operon control protein
AM408_RS25230	SM00421	helix_turn_helix, Lux Regulon
AM408_RS25260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM408_RS25350	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25385	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25390	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25465	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25465	SM00962	SRP54-type protein, GTPase domain
AM408_RS25465	SM00963	SRP54-type protein, helical bundle domain
AM408_RS25470	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25515	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25520	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25540	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25600	SM00354	helix_turn _helix lactose operon repressor
AM408_RS25620	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM408_RS25625	SM00642	Alpha-amylase domain
AM408_RS25630	SM00642	Alpha-amylase domain
AM408_RS25665	SM00450	Rhodanese Homology Domain
AM408_RS25675	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM408_RS25675	SM01134	AM408_RS25675
AM408_RS25680	SM00382	ATPases associated with a variety of cellular activities
AM408_RS25705	SM00945	ProQ/FINO family
AM408_RS25715	SM00318	Staphylococcal nuclease homologues
AM408_RS25805	SM00650	Ribosomal RNA adenine dimethylases
AM408_RS25855	SM00857	Resolvase, N terminal domain
AM408_RS26015	SM00507	HNH nucleases
AM408_RS26270	SM00382	ATPases associated with a variety of cellular activities
