locus-tag	class	description
FFHJCLDM_RS00010	COG0527	aspartate kinase activity
FFHJCLDM_RS00010	COG0460	homoserine dehydrogenase
FFHJCLDM_RS00020	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FFHJCLDM_RS00035	COG1115	amino acid carrier protein
FFHJCLDM_RS00045	COG0521	Mo-molybdopterin cofactor biosynthetic process
FFHJCLDM_RS00050	COG1584	GPR1 FUN34 yaaH family protein
FFHJCLDM_RS00055	COG4735	regulation of single-species biofilm formation
FFHJCLDM_RS00075	COG3385	transposase activity
FFHJCLDM_RS00090	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS00130	COG0196	riboflavin kinase activity
FFHJCLDM_RS00145	COG1047	Peptidyl-prolyl cis-trans
FFHJCLDM_RS00165	COG0505	Belongs to the CarA family
FFHJCLDM_RS00170	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FFHJCLDM_RS00220	COG0644	oxidoreductase
FFHJCLDM_RS00225	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FFHJCLDM_RS00230	COG2271	Major facilitator Superfamily
FFHJCLDM_RS00245	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FFHJCLDM_RS00270	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FFHJCLDM_RS00275	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FFHJCLDM_RS00280	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FFHJCLDM_RS00285	COG0564	pseudouridine synthase activity
FFHJCLDM_RS00295	COG0417	DNA replication proofreading
FFHJCLDM_RS00300	COG0235	Class ii aldolase
FFHJCLDM_RS00315	COG4977	sequence-specific DNA binding
FFHJCLDM_RS00320	COG0586	Pfam SNARE associated Golgi protein
FFHJCLDM_RS00330	COG1178	ABC-type Fe3 transport system permease component
FFHJCLDM_RS00335	COG4143	(ABC) transporter
FFHJCLDM_RS00350	COG2814	Major facilitator Superfamily
FFHJCLDM_RS00365	COG0473	3-isopropylmalate dehydrogenase activity
FFHJCLDM_RS00380	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS00390	COG0028	Belongs to the TPP enzyme family
FFHJCLDM_RS00395	COG0440	acetolactate synthase activity
FFHJCLDM_RS00405	COG1609	Transcriptional regulator
FFHJCLDM_RS00420	COG3116	cell division
FFHJCLDM_RS00425	COG0768	penicillin binding
FFHJCLDM_RS00430	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FFHJCLDM_RS00435	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FFHJCLDM_RS00445	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FFHJCLDM_RS00450	COG0772	Belongs to the SEDS family
FFHJCLDM_RS00465	COG1181	Belongs to the D-alanine--D-alanine ligase family
FFHJCLDM_RS00470	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FFHJCLDM_RS00475	COG0849	cell division
FFHJCLDM_RS00480	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FFHJCLDM_RS00500	COG0494	nUDIX hydrolase
FFHJCLDM_RS00515	COG0237	dephospho-CoA kinase activity
FFHJCLDM_RS00530	COG1459	type II secretion system
FFHJCLDM_RS00535	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FFHJCLDM_RS00540	COG4969	Belongs to the N-Me-Phe pilin family
FFHJCLDM_RS00545	COG0157	Belongs to the NadC ModD family
FFHJCLDM_RS00550	COG3023	N-Acetylmuramoyl-L-alanine amidase
FFHJCLDM_RS00555	COG3725	Membrane protein required for beta-lactamase induction
FFHJCLDM_RS00560	COG1113	amino acid transport
FFHJCLDM_RS00565	COG2186	Transcriptional regulator
FFHJCLDM_RS00570	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FFHJCLDM_RS00575	COG0508	dehydrogenase complex catalyzes the overall conversion of
FFHJCLDM_RS00580	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FFHJCLDM_RS00585	COG3064	Membrane
FFHJCLDM_RS00590	COG1049	propionate catabolic process, 2-methylcitrate cycle
FFHJCLDM_RS00615	COG2132	Multicopper oxidase
FFHJCLDM_RS00620	COG4993	Dehydrogenase
FFHJCLDM_RS00625	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FFHJCLDM_RS00630	COG0288	reversible hydration of carbon dioxide
FFHJCLDM_RS00635	COG1131	(ABC) transporter
FFHJCLDM_RS00640	COG0842	Transport permease protein
FFHJCLDM_RS00645	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS00650	COG0726	polysaccharide deacetylase
FFHJCLDM_RS00660	COG5464	transposase or invertase
FFHJCLDM_RS00675	COG3539	Fimbrial protein
FFHJCLDM_RS00680	COG3539	Fimbrial protein
FFHJCLDM_RS00685	COG3539	Fimbrial protein
FFHJCLDM_RS00690	COG3539	Fimbrial protein
FFHJCLDM_RS00695	COG3188	usher protein
FFHJCLDM_RS00700	COG3121	Chaperone
FFHJCLDM_RS00705	COG3539	Fimbrial protein
FFHJCLDM_RS00710	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FFHJCLDM_RS00715	COG0617	tRNA 3'-terminal CCA addition
FFHJCLDM_RS00725	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FFHJCLDM_RS00735	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FFHJCLDM_RS00740	COG1643	Atp-dependent helicase
FFHJCLDM_RS00745	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FFHJCLDM_RS00750	COG4774	siderophore transport
FFHJCLDM_RS00755	COG1120	ATPase activity
FFHJCLDM_RS00760	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FFHJCLDM_RS00765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FFHJCLDM_RS00790	COG2860	membrane
FFHJCLDM_RS00795	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FFHJCLDM_RS00810	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFHJCLDM_RS00815	COG3835	regulator
FFHJCLDM_RS00825	COG1408	metallophosphoesterase
FFHJCLDM_RS00840	COG0024	Methionine aminopeptidase
FFHJCLDM_RS00865	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FFHJCLDM_RS00870	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FFHJCLDM_RS00875	COG0575	Belongs to the CDS family
FFHJCLDM_RS00880	COG0750	zinc metalloprotease
FFHJCLDM_RS00890	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FFHJCLDM_RS00895	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FFHJCLDM_RS00920	COG0587	DNA-directed DNA polymerase activity
FFHJCLDM_RS00930	COG1982	Orn Lys Arg decarboxylase major
FFHJCLDM_RS00935	COG0346	lactoylglutathione lyase activity
FFHJCLDM_RS00940	COG0037	tRNA processing
FFHJCLDM_RS00945	COG4568	rho-dependent transcription termination
FFHJCLDM_RS00955	COG4681	YaeQ
FFHJCLDM_RS00960	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FFHJCLDM_RS00965	COG3015	lipoprotein NlpE involved in copper resistance
FFHJCLDM_RS00970	COG0791	NLP P60 protein
FFHJCLDM_RS00980	COG1720	tRNA m6t6A37 methyltransferase activity
FFHJCLDM_RS00990	COG1464	Belongs to the NlpA lipoprotein family
FFHJCLDM_RS00995	COG2011	ABC-type metal ion transport system permease component
FFHJCLDM_RS01000	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FFHJCLDM_RS01005	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FFHJCLDM_RS01040	COG0656	L-ascorbic acid biosynthetic process
FFHJCLDM_RS01045	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS01060	COG1388	LysM domain
FFHJCLDM_RS01060	COG0741	lytic transglycosylase activity
FFHJCLDM_RS01070	COG2226	methyltransferase
FFHJCLDM_RS01080	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FFHJCLDM_RS01105	COG5433	transposase activity
FFHJCLDM_RS01110	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FFHJCLDM_RS01120	COG1960	acyl-CoA dehydrogenase activity
FFHJCLDM_RS01130	COG0121	glutamine amidotransferase
FFHJCLDM_RS01135	COG3034	peptidoglycan biosynthetic process
FFHJCLDM_RS01140	COG3041	Addiction module toxin RelE StbE family
FFHJCLDM_RS01145	COG3077	Addiction module antitoxin, RelB DinJ family
FFHJCLDM_RS01150	COG0791	NLP P60 protein
FFHJCLDM_RS01155	COG1943	Transposase
FFHJCLDM_RS01175	COG2161	toxin-antitoxin pair type II binding
FFHJCLDM_RS01185	COG0454	-acetyltransferase
FFHJCLDM_RS01200	COG2195	Cleaves the N-terminal amino acid of tripeptides
FFHJCLDM_RS01225	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFHJCLDM_RS01245	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS01250	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FFHJCLDM_RS01255	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FFHJCLDM_RS01260	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FFHJCLDM_RS01265	COG2080	2 iron, 2 sulfur cluster binding
FFHJCLDM_RS01270	COG3477	response to acidic pH
FFHJCLDM_RS01280	COG0727	PFAM Uncharacterised protein family (UPF0153)
FFHJCLDM_RS01285	COG3121	Chaperone
FFHJCLDM_RS01295	COG3188	usher protein
FFHJCLDM_RS01340	COG2207	Transcriptional regulator
FFHJCLDM_RS01340	COG3708	Transcriptional regulator
FFHJCLDM_RS01350	COG3059	membrane
FFHJCLDM_RS01360	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FFHJCLDM_RS01365	COG2207	Transcriptional regulator
FFHJCLDM_RS01370	COG0247	lactate metabolic process
FFHJCLDM_RS01375	COG1139	Iron-sulfur cluster binding protein
FFHJCLDM_RS01380	COG1556	Lactate utilization protein
FFHJCLDM_RS01405	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FFHJCLDM_RS01415	COG2771	luxR family
FFHJCLDM_RS01415	COG2200	EAL domain
FFHJCLDM_RS01420	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS01430	COG0666	response to abiotic stimulus
FFHJCLDM_RS01440	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FFHJCLDM_RS01445	COG1304	FMN binding
FFHJCLDM_RS01455	COG0549	Belongs to the carbamate kinase family
FFHJCLDM_RS01460	COG0402	S-adenosylhomocysteine deaminase activity
FFHJCLDM_RS01465	COG1064	alcohol dehydrogenase
FFHJCLDM_RS01480	COG1280	lysine exporter protein (LysE YggA)
FFHJCLDM_RS01490	COG3829	transcription factor binding
FFHJCLDM_RS01495	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FFHJCLDM_RS01500	COG0372	Belongs to the citrate synthase family
FFHJCLDM_RS01505	COG2079	MmgE PrpD family protein
FFHJCLDM_RS01510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FFHJCLDM_RS01515	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FFHJCLDM_RS01520	COG0402	S-adenosylhomocysteine deaminase activity
FFHJCLDM_RS01525	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS01530	COG0288	reversible hydration of carbon dioxide
FFHJCLDM_RS01540	COG2807	transmembrane transport
FFHJCLDM_RS01545	COG0110	maltose O-acetyltransferase activity
FFHJCLDM_RS01550	COG2223	nitrite transmembrane transporter activity
FFHJCLDM_RS01555	COG3250	beta-galactosidase activity
FFHJCLDM_RS01560	COG1609	Transcriptional regulator
FFHJCLDM_RS01565	COG1414	Transcriptional regulator
FFHJCLDM_RS01585	COG3971	2-oxopent-4-enoate hydratase activity
FFHJCLDM_RS01600	COG2814	Major facilitator Superfamily
FFHJCLDM_RS01605	COG3122	Protein conserved in bacteria
FFHJCLDM_RS01635	COG4521	taurine ABC transporter
FFHJCLDM_RS01640	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FFHJCLDM_RS01645	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FFHJCLDM_RS01650	COG2175	clavaminate synthase activity
FFHJCLDM_RS01655	COG0113	porphobilinogen synthase activity
FFHJCLDM_RS01660	COG3468	outer membrane autotransporter barrel domain protein
FFHJCLDM_RS01665	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FFHJCLDM_RS01670	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FFHJCLDM_RS01675	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FFHJCLDM_RS01695	COG1181	Belongs to the D-alanine--D-alanine ligase family
FFHJCLDM_RS01710	COG1785	Belongs to the alkaline phosphatase family
FFHJCLDM_RS01720	COG3706	GGDEF domain
FFHJCLDM_RS01725	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FFHJCLDM_RS01745	COG4126	flavin adenine dinucleotide binding
FFHJCLDM_RS01775	COG1940	carbohydrate kinase activity
FFHJCLDM_RS01780	COG2814	Major facilitator Superfamily
FFHJCLDM_RS01785	COG0419	ATPase involved in DNA repair
FFHJCLDM_RS01790	COG0420	3'-5' exonuclease activity
FFHJCLDM_RS01795	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS01800	COG5002	protein histidine kinase activity
FFHJCLDM_RS01805	COG1114	Component of the transport system for branched-chain amino acids
FFHJCLDM_RS01810	COG1113	amino acid transport
FFHJCLDM_RS01815	COG0366	Alpha amylase catalytic
FFHJCLDM_RS01835	COG1862	Preprotein translocase
FFHJCLDM_RS01840	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FFHJCLDM_RS01845	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FFHJCLDM_RS01850	COG1403	HNH endonuclease
FFHJCLDM_RS01855	COG3248	Nucleoside-binding outer membrane protein
FFHJCLDM_RS01860	COG4238	major outer membrane lipoprotein
FFHJCLDM_RS01870	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FFHJCLDM_RS01870	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FFHJCLDM_RS01885	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FFHJCLDM_RS01890	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FFHJCLDM_RS01895	COG0667	Aldo Keto reductase
FFHJCLDM_RS01905	COG0142	geranyltranstransferase activity
FFHJCLDM_RS01920	COG0693	protein deglycase activity
FFHJCLDM_RS01925	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FFHJCLDM_RS01935	COG2814	Major facilitator Superfamily
FFHJCLDM_RS01960	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FFHJCLDM_RS01965	COG1845	cytochrome c oxidase, subunit III
FFHJCLDM_RS01970	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FFHJCLDM_RS01975	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FFHJCLDM_RS01980	COG2223	nitrite transmembrane transporter activity
FFHJCLDM_RS01985	COG3056	Lipoprotein
FFHJCLDM_RS01990	COG0271	Belongs to the BolA IbaG family
FFHJCLDM_RS02010	COG3385	transposase activity
FFHJCLDM_RS02015	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FFHJCLDM_RS02020	COG0776	regulation of translation
FFHJCLDM_RS02025	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FFHJCLDM_RS02030	COG1555	photosystem II stabilization
FFHJCLDM_RS02035	COG0824	Thioesterase
FFHJCLDM_RS02045	COG4533	DNA binding
FFHJCLDM_RS02055	COG1522	sequence-specific DNA binding
FFHJCLDM_RS02060	COG1132	(ABC) transporter
FFHJCLDM_RS02065	COG1132	(ABC) transporter
FFHJCLDM_RS02070	COG0347	Belongs to the P(II) protein family
FFHJCLDM_RS02075	COG0004	ammonium transporteR
FFHJCLDM_RS02080	COG1946	Acyl-CoA thioesterase
FFHJCLDM_RS02085	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FFHJCLDM_RS02090	COG3695	enzyme binding
FFHJCLDM_RS02100	COG5507	3-demethylubiquinone-9 3-methyltransferase
FFHJCLDM_RS02105	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FFHJCLDM_RS02115	COG0110	maltose O-acetyltransferase activity
FFHJCLDM_RS02130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFHJCLDM_RS02135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFHJCLDM_RS02140	COG1309	transcriptional regulator
FFHJCLDM_RS02145	COG1196	nuclear chromosome segregation
FFHJCLDM_RS02145	COG3264	Mechanosensitive ion channel
FFHJCLDM_RS02155	COG3923	Primosomal replication protein n
FFHJCLDM_RS02160	COG2832	Protein of unknown function (DUF454)
FFHJCLDM_RS02170	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FFHJCLDM_RS02205	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS02210	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FFHJCLDM_RS02210	COG4651	solute:proton antiporter activity
FFHJCLDM_RS02215	COG2223	nitrite transmembrane transporter activity
FFHJCLDM_RS02220	COG0737	Belongs to the 5'-nucleotidase family
FFHJCLDM_RS02225	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FFHJCLDM_RS02230	COG3735	TraB family
FFHJCLDM_RS02235	COG3093	addiction module antidote protein HigA
FFHJCLDM_RS02240	COG2217	Heavy metal translocating P-type atpase
FFHJCLDM_RS02245	COG2066	Belongs to the glutaminase family
FFHJCLDM_RS02250	COG0531	amino acid
FFHJCLDM_RS02255	COG0789	Transcriptional regulator
FFHJCLDM_RS02260	COG1585	Membrane protein implicated in regulation of membrane protease activity
FFHJCLDM_RS02265	COG0330	HflC and HflK could
FFHJCLDM_RS02270	COG4619	ABC transporter
FFHJCLDM_RS02275	COG0390	transport system, permease component
FFHJCLDM_RS02280	COG3118	belongs to the thioredoxin family
FFHJCLDM_RS02285	COG0300	oxidoreductase activity
FFHJCLDM_RS02290	COG2755	lipolytic protein G-D-S-L family
FFHJCLDM_RS02295	COG4181	ATPase activity
FFHJCLDM_RS02300	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FFHJCLDM_RS02305	COG3209	COG3209 Rhs family protein
FFHJCLDM_RS02315	COG3209	COG3209 Rhs family protein
FFHJCLDM_RS02345	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS02355	COG1414	Transcriptional regulator
FFHJCLDM_RS02360	COG3960	tartronate-semialdehyde synthase activity
FFHJCLDM_RS02365	COG3622	Belongs to the hyi family
FFHJCLDM_RS02370	COG2084	Dehydrogenase
FFHJCLDM_RS02375	COG1953	Uracil, thiamine, allantoin
FFHJCLDM_RS02385	COG2233	PERMEase
FFHJCLDM_RS02390	COG1929	Belongs to the glycerate kinase type-1 family
FFHJCLDM_RS02395	COG3257	ureidoglycine aminohydrolase activity
FFHJCLDM_RS02400	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FFHJCLDM_RS02405	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FFHJCLDM_RS02410	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FFHJCLDM_RS02415	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FFHJCLDM_RS02425	COG0549	Belongs to the carbamate kinase family
FFHJCLDM_RS02430	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FFHJCLDM_RS02435	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FFHJCLDM_RS02445	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FFHJCLDM_RS02455	COG1988	membrane-bound metal-dependent
FFHJCLDM_RS02460	COG2501	S4 domain
FFHJCLDM_RS02470	COG3539	Fimbrial protein
FFHJCLDM_RS02475	COG3121	Chaperone
FFHJCLDM_RS02480	COG3188	usher protein
FFHJCLDM_RS02485	COG3539	Fimbrial protein
FFHJCLDM_RS02490	COG3539	Fimbrial protein
FFHJCLDM_RS02495	COG2197	response regulator
FFHJCLDM_RS02505	COG0582	viral genome integration into host DNA
FFHJCLDM_RS02535	COG2076	Multidrug Resistance protein
FFHJCLDM_RS02545	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FFHJCLDM_RS02550	COG1881	PFAM PEBP family protein
FFHJCLDM_RS02555	COG2207	Transcriptional regulator
FFHJCLDM_RS02615	COG3772	lysozyme
FFHJCLDM_RS02655	COG5002	protein histidine kinase activity
FFHJCLDM_RS02660	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS02665	COG1538	Outer membrane efflux protein
FFHJCLDM_RS02670	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFHJCLDM_RS02675	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFHJCLDM_RS02680	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFHJCLDM_RS02685	COG1113	amino acid transport
FFHJCLDM_RS02690	COG0668	transmembrane transport
FFHJCLDM_RS02695	COG0778	Nitroreductase
FFHJCLDM_RS02700	COG2315	Protein conserved in bacteria
FFHJCLDM_RS02725	COG2801	Transposase and inactivated derivatives
FFHJCLDM_RS02735	COG3385	transposase activity
FFHJCLDM_RS02740	COG2977	Belongs to the P-Pant transferase superfamily
FFHJCLDM_RS02745	COG4771	TonB-dependent receptor
FFHJCLDM_RS02750	COG2382	esterase
FFHJCLDM_RS02755	COG3251	PFAM MbtH domain protein
FFHJCLDM_RS02760	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FFHJCLDM_RS02760	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FFHJCLDM_RS02765	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FFHJCLDM_RS02770	COG1120	ATPase activity
FFHJCLDM_RS02775	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FFHJCLDM_RS02780	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FFHJCLDM_RS02790	COG4592	Periplasmic binding protein
FFHJCLDM_RS02795	COG1169	isochorismate synthase
FFHJCLDM_RS02800	COG1021	2,3-dihydroxybenzoate-AMP ligase
FFHJCLDM_RS02805	COG1535	isochorismatase
FFHJCLDM_RS02805	COG3433	isochorismatase activity
FFHJCLDM_RS02810	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS02815	COG2050	protein possibly involved in aromatic compounds catabolism
FFHJCLDM_RS02825	COG2879	small protein
FFHJCLDM_RS02830	COG0371	Dehydrogenase
FFHJCLDM_RS02835	COG0436	Aminotransferase
FFHJCLDM_RS02840	COG1475	DNA binding
FFHJCLDM_RS02855	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FFHJCLDM_RS02860	COG0450	alkyl hydroperoxide reductase
FFHJCLDM_RS02865	COG3634	alkyl hydroperoxide reductase activity
FFHJCLDM_RS02870	COG0589	response to stress
FFHJCLDM_RS02875	COG1063	alcohol dehydrogenase
FFHJCLDM_RS02880	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FFHJCLDM_RS02885	COG3719	Belongs to the RNase T2 family
FFHJCLDM_RS02890	COG0471	metal ion transport
FFHJCLDM_RS02905	COG3051	citrate lyase alpha subunit
FFHJCLDM_RS02910	COG2301	Belongs to the HpcH HpaI aldolase family
FFHJCLDM_RS02920	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FFHJCLDM_RS02930	COG3290	protein histidine kinase activity
FFHJCLDM_RS02935	COG4565	transcriptional regulatory protein
FFHJCLDM_RS02940	COG3069	C4-dicarboxylate transmembrane transporter activity
FFHJCLDM_RS02960	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FFHJCLDM_RS02965	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FFHJCLDM_RS02975	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS02990	COG1686	Belongs to the peptidase S11 family
FFHJCLDM_RS02995	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FFHJCLDM_RS03000	COG0772	Belongs to the SEDS family
FFHJCLDM_RS03005	COG0768	penicillin binding
FFHJCLDM_RS03015	COG0799	negative regulation of ribosome biogenesis
FFHJCLDM_RS03020	COG0406	alpha-ribazole phosphatase activity
FFHJCLDM_RS03030	COG1466	dna polymerase III delta subunit
FFHJCLDM_RS03045	COG2888	peptidyl-tyrosine sulfation
FFHJCLDM_RS03065	COG0443	Heat shock 70 kDa protein
FFHJCLDM_RS03090	COG0765	amino acid transport
FFHJCLDM_RS03095	COG0765	amino acid transport
FFHJCLDM_RS03100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS03110	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FFHJCLDM_RS03115	COG4535	Mg2 and Co2 transporter CorC
FFHJCLDM_RS03125	COG1702	phosphate starvation-inducible protein PhoH
FFHJCLDM_RS03135	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FFHJCLDM_RS03175	COG0367	asparagine synthase
FFHJCLDM_RS03180	COG0647	UMP catabolic process
FFHJCLDM_RS03185	COG1940	carbohydrate kinase activity
FFHJCLDM_RS03185	COG1846	Transcriptional regulator
FFHJCLDM_RS03190	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FFHJCLDM_RS03200	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS03200	COG2190	(PTS) system
FFHJCLDM_RS03200	COG1263	PTS System
FFHJCLDM_RS03220	COG0735	belongs to the Fur family
FFHJCLDM_RS03230	COG0716	FMN binding
FFHJCLDM_RS03240	COG0596	Alpha beta hydrolase
FFHJCLDM_RS03245	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FFHJCLDM_RS03250	COG0033	Phosphoglucomutase
FFHJCLDM_RS03270	COG0531	amino acid
FFHJCLDM_RS03275	COG1982	Orn Lys Arg decarboxylase major
FFHJCLDM_RS03285	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS03290	COG2205	protein histidine kinase activity
FFHJCLDM_RS03365	COG3272	Protein of unknown function (DUF1722)
FFHJCLDM_RS03370	COG0415	Belongs to the DNA photolyase family
FFHJCLDM_RS03380	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FFHJCLDM_RS03385	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FFHJCLDM_RS03390	COG1984	allophanate hydrolase subunit 2
FFHJCLDM_RS03405	COG3180	Ammonia monooxygenase
FFHJCLDM_RS03410	COG3539	Fimbrial protein
FFHJCLDM_RS03415	COG3121	Chaperone
FFHJCLDM_RS03420	COG3188	usher protein
FFHJCLDM_RS03425	COG3539	Fimbrial protein
FFHJCLDM_RS03430	COG0372	Belongs to the citrate synthase family
FFHJCLDM_RS03440	COG2009	succinate dehydrogenase
FFHJCLDM_RS03445	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FFHJCLDM_RS03450	COG1053	succinate dehydrogenase
FFHJCLDM_RS03455	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FFHJCLDM_RS03460	COG0567	Dehydrogenase, E1 component
FFHJCLDM_RS03465	COG0508	dehydrogenase complex catalyzes the overall conversion of
FFHJCLDM_RS03475	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FFHJCLDM_RS03480	COG2188	Transcriptional regulator
FFHJCLDM_RS03485	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS03485	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS03485	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS03490	COG0383	alpha-mannosidase activity
FFHJCLDM_RS03500	COG1271	oxidase subunit
FFHJCLDM_RS03505	COG1294	oxidase, subunit
FFHJCLDM_RS03510	COG4890	Cyd operon protein YbgT
FFHJCLDM_RS03515	COG3790	cyd operon protein YbgE
FFHJCLDM_RS03520	COG0824	Thioesterase
FFHJCLDM_RS03525	COG0811	peptide transport
FFHJCLDM_RS03530	COG0848	biopolymer transport protein
FFHJCLDM_RS03535	COG3064	Membrane
FFHJCLDM_RS03545	COG2885	chlorophyll binding
FFHJCLDM_RS03550	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FFHJCLDM_RS03595	COG3201	nicotinamide mononucleotide transporter
FFHJCLDM_RS03600	COG1230	cation diffusion facilitator family transporter
FFHJCLDM_RS03610	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FFHJCLDM_RS03625	COG4677	pectinesterase activity
FFHJCLDM_RS03630	COG0582	viral genome integration into host DNA
FFHJCLDM_RS03675	COG5484	DNA packaging
FFHJCLDM_RS03675	COG3728	DNA packaging
FFHJCLDM_RS03680	COG1783	phage Terminase large subunit
FFHJCLDM_RS03715	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FFHJCLDM_RS03725	COG1881	PFAM PEBP family protein
FFHJCLDM_RS03730	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FFHJCLDM_RS03745	COG2226	methyltransferase
FFHJCLDM_RS03750	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FFHJCLDM_RS03760	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FFHJCLDM_RS03770	COG0521	Mo-molybdopterin cofactor biosynthetic process
FFHJCLDM_RS03780	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FFHJCLDM_RS03785	COG0314	molybdopterin synthase activity
FFHJCLDM_RS03790	COG0670	Belongs to the BI1 family
FFHJCLDM_RS03795	COG0670	Belongs to the BI1 family
FFHJCLDM_RS03800	COG0392	lysyltransferase activity
FFHJCLDM_RS03805	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FFHJCLDM_RS03810	COG3568	Endonuclease Exonuclease Phosphatase
FFHJCLDM_RS03820	COG0842	Transport permease protein
FFHJCLDM_RS03825	COG0842	Transport permease protein
FFHJCLDM_RS03830	COG1131	(ABC) transporter
FFHJCLDM_RS03840	COG1309	transcriptional regulator
FFHJCLDM_RS03845	COG0513	Belongs to the DEAD box helicase family
FFHJCLDM_RS03850	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
FFHJCLDM_RS03855	COG1199	ATP-dependent helicase activity
FFHJCLDM_RS03860	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FFHJCLDM_RS03865	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FFHJCLDM_RS03875	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FFHJCLDM_RS03885	COG4774	siderophore transport
FFHJCLDM_RS03900	COG0668	transmembrane transport
FFHJCLDM_RS03905	COG1126	abc transporter atp-binding protein
FFHJCLDM_RS03910	COG0765	amino acid transport
FFHJCLDM_RS03915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS03925	COG5006	permease, DMT superfamily
FFHJCLDM_RS03935	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FFHJCLDM_RS03940	COG2194	sulfuric ester hydrolase activity
FFHJCLDM_RS03950	COG1321	iron dependent repressor
FFHJCLDM_RS03955	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FFHJCLDM_RS03960	COG1376	ErfK ybiS ycfS ynhG family protein
FFHJCLDM_RS03965	COG0488	(ABC) transporter
FFHJCLDM_RS03975	COG0561	phosphatase activity
FFHJCLDM_RS03980	COG1882	Formate acetyltransferase
FFHJCLDM_RS03985	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FFHJCLDM_RS03990	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FFHJCLDM_RS03995	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FFHJCLDM_RS04000	COG0303	'Molybdopterin
FFHJCLDM_RS04005	COG1446	asparaginase
FFHJCLDM_RS04010	COG4172	Belongs to the ABC transporter superfamily
FFHJCLDM_RS04015	COG0747	negative chemotaxis
FFHJCLDM_RS04025	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFHJCLDM_RS04035	COG2199	diguanylate cyclase activity
FFHJCLDM_RS04050	COG2133	pyrroloquinoline quinone binding
FFHJCLDM_RS04055	COG0625	glutathione transferase activity
FFHJCLDM_RS04060	COG1686	Belongs to the peptidase S11 family
FFHJCLDM_RS04065	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS04070	COG0671	phosphoesterase, PA-phosphatase related
FFHJCLDM_RS04075	COG2814	Major facilitator Superfamily
FFHJCLDM_RS04085	COG0561	phosphatase activity
FFHJCLDM_RS04090	COG0738	Major facilitator superfamily
FFHJCLDM_RS04095	COG3226	Transcriptional regulator
FFHJCLDM_RS04105	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FFHJCLDM_RS04155	COG4695	Portal protein
FFHJCLDM_RS04225	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FFHJCLDM_RS04260	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FFHJCLDM_RS04270	COG0778	Nitroreductase
FFHJCLDM_RS04285	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FFHJCLDM_RS04290	COG3842	ATPase activity
FFHJCLDM_RS04295	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFHJCLDM_RS04300	COG1177	transmembrane transport
FFHJCLDM_RS04315	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS04320	COG4160	amino acid transport
FFHJCLDM_RS04325	COG4215	(ABC) transporter
FFHJCLDM_RS04330	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS04335	COG1126	abc transporter atp-binding protein
FFHJCLDM_RS04350	COG3023	N-Acetylmuramoyl-L-alanine amidase
FFHJCLDM_RS04355	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FFHJCLDM_RS04360	COG0702	epimerase
FFHJCLDM_RS04365	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FFHJCLDM_RS04370	COG0028	Belongs to the TPP enzyme family
FFHJCLDM_RS04375	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FFHJCLDM_RS04385	COG2431	L-lysine efflux transmembrane transporter activity
FFHJCLDM_RS04395	COG3593	DNA synthesis involved in DNA repair
FFHJCLDM_RS04400	COG2990	Protein conserved in bacteria
FFHJCLDM_RS04405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFHJCLDM_RS04410	COG0577	efflux transmembrane transporter activity
FFHJCLDM_RS04410	COG1136	(ABC) transporter
FFHJCLDM_RS04415	COG1278	Cold shock
FFHJCLDM_RS04425	COG0542	response to heat
FFHJCLDM_RS04450	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FFHJCLDM_RS04455	COG4988	ABC transporter
FFHJCLDM_RS04460	COG0492	ferredoxin-NADP+ reductase activity
FFHJCLDM_RS04465	COG1522	sequence-specific DNA binding
FFHJCLDM_RS04470	COG1178	ABC-type Fe3 transport system permease component
FFHJCLDM_RS04470	COG1674	ftsk spoiiie
FFHJCLDM_RS04480	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FFHJCLDM_RS04490	COG0243	molybdopterin cofactor binding
FFHJCLDM_RS04495	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS04500	COG3302	dmso reductase anchor subunit
FFHJCLDM_RS04505	COG1335	isochorismatase
FFHJCLDM_RS04515	COG0531	amino acid
FFHJCLDM_RS04520	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS04525	COG2249	NAD(P)H dehydrogenase (quinone) activity
FFHJCLDM_RS04530	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FFHJCLDM_RS04535	COG1882	Formate acetyltransferase
FFHJCLDM_RS04540	COG2116	formate transmembrane transporter activity
FFHJCLDM_RS04545	COG1944	ATP diphosphatase activity
FFHJCLDM_RS04550	COG2323	membrane
FFHJCLDM_RS04565	COG0501	Belongs to the peptidase M48B family
FFHJCLDM_RS04575	COG0539	negative regulation of cytoplasmic translation
FFHJCLDM_RS04585	COG2333	competence protein COMEC
FFHJCLDM_RS04585	COG0658	competence protein
FFHJCLDM_RS04590	COG1132	(ABC) transporter
FFHJCLDM_RS04595	COG1663	tetraacyldisaccharide 4'-kinase activity
FFHJCLDM_RS04600	COG3214	Protein conserved in bacteria
FFHJCLDM_RS04615	COG3173	Aminoglycoside phosphotransferase
FFHJCLDM_RS04620	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FFHJCLDM_RS04625	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FFHJCLDM_RS04635	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FFHJCLDM_RS04645	COG2989	Protein conserved in bacteria
FFHJCLDM_RS04650	COG3108	Peptidase M15
FFHJCLDM_RS04655	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FFHJCLDM_RS04660	COG1448	Aminotransferase
FFHJCLDM_RS04680	COG0308	aminopeptidase N
FFHJCLDM_RS04685	COG1116	anion transmembrane transporter activity
FFHJCLDM_RS04690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FFHJCLDM_RS04700	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FFHJCLDM_RS04705	COG0431	NADPH-dependent FMN reductase
FFHJCLDM_RS04710	COG3539	Fimbrial protein
FFHJCLDM_RS04715	COG3121	Chaperone
FFHJCLDM_RS04720	COG3188	usher protein
FFHJCLDM_RS04725	COG3539	Fimbrial protein
FFHJCLDM_RS04730	COG3539	Fimbrial protein
FFHJCLDM_RS04735	COG3539	Fimbrial protein
FFHJCLDM_RS04740	COG3121	Chaperone
FFHJCLDM_RS04755	COG3217	Mosc domain protein beta barrel domain protein
FFHJCLDM_RS04755	COG0633	Ferredoxin
FFHJCLDM_RS04765	COG0488	(ABC) transporter
FFHJCLDM_RS04770	COG2995	paraquat-inducible protein a
FFHJCLDM_RS04775	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FFHJCLDM_RS04775	COG3008	intermembrane lipid transfer
FFHJCLDM_RS04780	COG3009	Protein conserved in bacteria
FFHJCLDM_RS04785	COG3130	regulation of translation
FFHJCLDM_RS04795	COG1067	ATP-dependent peptidase activity
FFHJCLDM_RS04805	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FFHJCLDM_RS04805	COG2885	chlorophyll binding
FFHJCLDM_RS04815	COG3070	regulator of competence-specific genes
FFHJCLDM_RS04820	COG1289	transmembrane transporter activity
FFHJCLDM_RS04825	COG3304	Inner membrane component domain
FFHJCLDM_RS04830	COG0210	DNA helicase
FFHJCLDM_RS04845	COG1832	CoA-binding protein
FFHJCLDM_RS04860	COG1254	Belongs to the acylphosphatase family
FFHJCLDM_RS04870	COG0670	Belongs to the BI1 family
FFHJCLDM_RS04880	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FFHJCLDM_RS04885	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FFHJCLDM_RS04890	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
FFHJCLDM_RS04895	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FFHJCLDM_RS04900	COG1999	signal sequence binding
FFHJCLDM_RS04905	COG1773	rubredoxin
FFHJCLDM_RS04910	COG1271	oxidase subunit
FFHJCLDM_RS04915	COG1294	oxidase, subunit
FFHJCLDM_RS04930	COG3206	protein involved in exopolysaccharide biosynthesis
FFHJCLDM_RS04930	COG0489	protein tyrosine kinase activity
FFHJCLDM_RS04935	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FFHJCLDM_RS04940	COG1596	polysaccharide export
FFHJCLDM_RS04945	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFHJCLDM_RS04965	COG1278	Cold shock
FFHJCLDM_RS04970	COG1278	Cold shock
FFHJCLDM_RS04990	COG0348	domain, Protein
FFHJCLDM_RS04995	COG2198	Histidine kinase
FFHJCLDM_RS04995	COG2205	protein histidine kinase activity
FFHJCLDM_RS04995	COG0784	Response regulator, receiver
FFHJCLDM_RS05000	COG1879	ABC-type sugar transport system periplasmic component
FFHJCLDM_RS05005	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS05010	COG3005	denitrification pathway
FFHJCLDM_RS05015	COG0243	molybdopterin cofactor binding
FFHJCLDM_RS05055	COG3729	General stress protein
FFHJCLDM_RS05060	COG2233	PERMEase
FFHJCLDM_RS05085	COG1335	isochorismatase
FFHJCLDM_RS05095	COG1309	transcriptional regulator
FFHJCLDM_RS05100	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FFHJCLDM_RS05100	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FFHJCLDM_RS05100	COG0506	proline dehydrogenase activity
FFHJCLDM_RS05110	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FFHJCLDM_RS05125	COG2822	iron ion transport
FFHJCLDM_RS05130	COG2837	iron assimilation
FFHJCLDM_RS05135	COG1702	phosphate starvation-inducible protein PhoH
FFHJCLDM_RS05140	COG3658	cytochrome
FFHJCLDM_RS05145	COG1215	transferase activity, transferring glycosyl groups
FFHJCLDM_RS05150	COG1649	PFAM Uncharacterised BCR, COG1649
FFHJCLDM_RS05150	COG0726	polysaccharide deacetylase
FFHJCLDM_RS05155	COG0457	Tetratricopeptide repeat
FFHJCLDM_RS05160	COG3706	GGDEF domain
FFHJCLDM_RS05185	COG3381	protein complex oligomerization
FFHJCLDM_RS05195	COG1462	curli production assembly transport component CsgG
FFHJCLDM_RS05210	COG2197	response regulator
FFHJCLDM_RS05235	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FFHJCLDM_RS05240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FFHJCLDM_RS05255	COG2943	transferase activity, transferring hexosyl groups
FFHJCLDM_RS05260	COG5645	(Lipo)protein
FFHJCLDM_RS05275	COG1560	Kdo2-lipid A biosynthetic process
FFHJCLDM_RS05285	COG2353	YceI-like domain
FFHJCLDM_RS05290	COG3038	cytochrome b561
FFHJCLDM_RS05325	COG2999	glutathione oxidoreductase activity
FFHJCLDM_RS05335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FFHJCLDM_RS05345	COG0673	inositol 2-dehydrogenase activity
FFHJCLDM_RS05350	COG0728	peptidoglycan biosynthetic process
FFHJCLDM_RS05355	COG3418	PFAM FlgN family protein
FFHJCLDM_RS05360	COG2747	anti-sigma28 factor FlgM
FFHJCLDM_RS05365	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FFHJCLDM_RS05370	COG1815	bacterial-type flagellum-dependent cell motility
FFHJCLDM_RS05375	COG1558	bacterial-type flagellum-dependent cell motility
FFHJCLDM_RS05380	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FFHJCLDM_RS05385	COG1749	Flagellar hook protein flgE
FFHJCLDM_RS05390	COG4787	bacterial-type flagellum-dependent cell motility
FFHJCLDM_RS05395	COG4786	Flagellar basal body rod
FFHJCLDM_RS05410	COG1705	Flagellar rod assembly protein muramidase FlgJ
FFHJCLDM_RS05410	COG3951	Flagellar rod assembly protein muramidase FlgJ
FFHJCLDM_RS05415	COG1256	bacterial-type flagellum assembly
FFHJCLDM_RS05420	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FFHJCLDM_RS05425	COG1530	ribonuclease E activity
FFHJCLDM_RS05430	COG0564	pseudouridine synthase activity
FFHJCLDM_RS05435	COG0424	maF-like protein
FFHJCLDM_RS05440	COG1399	metal-binding, possibly nucleic acid-binding protein
FFHJCLDM_RS05460	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FFHJCLDM_RS05465	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS05475	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FFHJCLDM_RS05480	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FFHJCLDM_RS05485	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FFHJCLDM_RS05495	COG0470	DNA polymerase III
FFHJCLDM_RS05500	COG0084	hydrolase, TatD family'
FFHJCLDM_RS05505	COG1263	PTS System
FFHJCLDM_RS05505	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS05510	COG4773	Receptor
FFHJCLDM_RS05515	COG0537	adenosine 5'-monophosphoramidase activity
FFHJCLDM_RS05520	COG5633	Lipoprotein
FFHJCLDM_RS05525	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FFHJCLDM_RS05545	COG1252	NADH dehydrogenase
FFHJCLDM_RS05550	COG3134	Outer membrane lipoprotein
FFHJCLDM_RS05555	COG1309	transcriptional regulator
FFHJCLDM_RS05565	COG1388	LysM domain
FFHJCLDM_RS05565	COG1376	ErfK ybiS ycfS ynhG family protein
FFHJCLDM_RS05570	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FFHJCLDM_RS05575	COG4763	Acyl-transferase
FFHJCLDM_RS05580	COG4591	ABC-type transport system involved in lipoprotein release permease component
FFHJCLDM_RS05590	COG4591	ABC-type transport system involved in lipoprotein release permease component
FFHJCLDM_RS05610	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FFHJCLDM_RS05615	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FFHJCLDM_RS05625	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FFHJCLDM_RS05630	COG1177	transmembrane transport
FFHJCLDM_RS05650	COG2850	peptidyl-arginine hydroxylation
FFHJCLDM_RS05655	COG2205	protein histidine kinase activity
FFHJCLDM_RS05665	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FFHJCLDM_RS05685	COG1187	pseudouridine synthase activity
FFHJCLDM_RS05690	COG0538	isocitrate dehydrogenase activity
FFHJCLDM_RS05710	COG5562	phage envelope protein
FFHJCLDM_RS05715	COG0789	Transcriptional regulator
FFHJCLDM_RS05720	COG2200	EAL domain
FFHJCLDM_RS05745	COG2200	EAL domain
FFHJCLDM_RS05795	COG2894	cell division
FFHJCLDM_RS05820	COG0179	Fumarylacetoacetate (FAA) hydrolase
FFHJCLDM_RS05835	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FFHJCLDM_RS05840	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FFHJCLDM_RS05845	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FFHJCLDM_RS05860	COG2719	SpoVR family
FFHJCLDM_RS05870	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FFHJCLDM_RS05880	COG1619	proteins homologs of microcin C7 resistance protein MccF
FFHJCLDM_RS05890	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FFHJCLDM_RS05910	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FFHJCLDM_RS05910	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FFHJCLDM_RS05910	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS05915	COG1461	Dihydroxyacetone kinase
FFHJCLDM_RS05920	COG2376	Dihydroxyacetone kinase
FFHJCLDM_RS05925	COG3284	Transcriptional regulator
FFHJCLDM_RS05930	COG3468	outer membrane autotransporter barrel domain protein
FFHJCLDM_RS05935	COG0012	GTP binding
FFHJCLDM_RS05950	COG0659	secondary active sulfate transmembrane transporter activity
FFHJCLDM_RS05955	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FFHJCLDM_RS05980	COG2890	protein-(glutamine-N5) methyltransferase activity
FFHJCLDM_RS05985	COG3094	Invasion gene expression up-regulator, SirB
FFHJCLDM_RS05990	COG2912	Transglutaminase-like superfamily
FFHJCLDM_RS06015	COG0387	Pfam Sodium calcium exchanger
FFHJCLDM_RS06020	COG4572	Cation transport regulator
FFHJCLDM_RS06025	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FFHJCLDM_RS06030	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FFHJCLDM_RS06035	COG4932	domain protein
FFHJCLDM_RS06040	COG2197	response regulator
FFHJCLDM_RS06045	COG3850	Histidine kinase
FFHJCLDM_RS06050	COG2223	nitrite transmembrane transporter activity
FFHJCLDM_RS06055	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FFHJCLDM_RS06060	COG1140	nitrate reductase beta subunit
FFHJCLDM_RS06065	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FFHJCLDM_RS06070	COG2181	nitrate reductase activity
FFHJCLDM_RS06095	COG0788	formyltetrahydrofolate deformylase activity
FFHJCLDM_RS06105	COG1752	Esterase of the alpha-beta hydrolase superfamily
FFHJCLDM_RS06110	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS06115	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FFHJCLDM_RS06125	COG1435	thymidine kinase activity
FFHJCLDM_RS06130	COG1454	alcohol dehydrogenase
FFHJCLDM_RS06130	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS06135	COG2095	MarC family integral membrane protein
FFHJCLDM_RS06140	COG4166	transmembrane transport
FFHJCLDM_RS06145	COG0601	transmembrane transport
FFHJCLDM_RS06150	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFHJCLDM_RS06155	COG0444	Belongs to the ABC transporter superfamily
FFHJCLDM_RS06160	COG4608	Belongs to the ABC transporter superfamily
FFHJCLDM_RS06180	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FFHJCLDM_RS06185	COG2350	Protein conserved in bacteria
FFHJCLDM_RS06190	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FFHJCLDM_RS06195	COG1607	acyl-coa hydrolase
FFHJCLDM_RS06215	COG3047	cAMP biosynthetic process
FFHJCLDM_RS06220	COG3685	Protein conserved in bacteria
FFHJCLDM_RS06225	COG3685	Protein conserved in bacteria
FFHJCLDM_RS06230	COG3729	General stress protein
FFHJCLDM_RS06245	COG0134	indole-3-glycerol-phosphate synthase activity
FFHJCLDM_RS06245	COG0135	phosphoribosylanthranilate isomerase activity
FFHJCLDM_RS06250	COG0512	Glutamine amidotransferase of anthranilate synthase
FFHJCLDM_RS06250	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FFHJCLDM_RS06255	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FFHJCLDM_RS06265	COG0613	PHP domain protein
FFHJCLDM_RS06270	COG0009	L-threonylcarbamoyladenylate synthase
FFHJCLDM_RS06290	COG1187	pseudouridine synthase activity
FFHJCLDM_RS06295	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FFHJCLDM_RS06300	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS06305	COG0616	signal peptide processing
FFHJCLDM_RS06315	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FFHJCLDM_RS06320	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS06340	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FFHJCLDM_RS06350	COG0671	phosphoesterase, PA-phosphatase related
FFHJCLDM_RS06355	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FFHJCLDM_RS06360	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FFHJCLDM_RS06370	COG0023	Translation Initiation Factor
FFHJCLDM_RS06380	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS06390	COG5001	Diguanylate cyclase
FFHJCLDM_RS06405	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FFHJCLDM_RS06405	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FFHJCLDM_RS06410	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FFHJCLDM_RS06415	COG2852	Protein conserved in bacteria
FFHJCLDM_RS06420	COG4172	Belongs to the ABC transporter superfamily
FFHJCLDM_RS06425	COG4172	Belongs to the ABC transporter superfamily
FFHJCLDM_RS06430	COG4171	peptide transport system, permease
FFHJCLDM_RS06435	COG4168	peptide transport system, permease
FFHJCLDM_RS06440	COG4166	transmembrane transport
FFHJCLDM_RS06450	COG0531	amino acid
FFHJCLDM_RS06460	COG0174	glutamine synthetase
FFHJCLDM_RS06465	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FFHJCLDM_RS06470	COG1917	Cupin 2, conserved barrel domain protein
FFHJCLDM_RS06470	COG1396	sequence-specific DNA binding
FFHJCLDM_RS06475	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS06480	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FFHJCLDM_RS06485	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FFHJCLDM_RS06490	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FFHJCLDM_RS06495	COG1842	Phage shock protein A
FFHJCLDM_RS06505	COG1983	PspC domain protein
FFHJCLDM_RS06515	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FFHJCLDM_RS06520	COG0366	Alpha amylase catalytic
FFHJCLDM_RS06525	COG1653	transport
FFHJCLDM_RS06530	COG1175	transmembrane transport
FFHJCLDM_RS06535	COG0395	ABC-type sugar transport system, permease component
FFHJCLDM_RS06540	COG1063	alcohol dehydrogenase
FFHJCLDM_RS06545	COG1082	Xylose isomerase domain protein TIM barrel
FFHJCLDM_RS06550	COG0673	inositol 2-dehydrogenase activity
FFHJCLDM_RS06555	COG1554	hydrolase, family 65, central catalytic
FFHJCLDM_RS06560	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFHJCLDM_RS06565	COG3842	ATPase activity
FFHJCLDM_RS06575	COG1609	Transcriptional regulator
FFHJCLDM_RS06580	COG3106	COG3106 Predicted ATPase
FFHJCLDM_RS06590	COG3283	Transcriptional regulator of aromatic amino acids metabolism
FFHJCLDM_RS06595	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FFHJCLDM_RS06600	COG4948	Mandelate Racemase Muconate Lactonizing
FFHJCLDM_RS06605	COG2866	Carboxypeptidase
FFHJCLDM_RS06620	COG1073	alpha beta
FFHJCLDM_RS06625	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS06630	COG4166	transmembrane transport
FFHJCLDM_RS06635	COG0668	transmembrane transport
FFHJCLDM_RS06640	COG3182	Iron-regulated membrane protein
FFHJCLDM_RS06645	COG0589	response to stress
FFHJCLDM_RS06655	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FFHJCLDM_RS06660	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FFHJCLDM_RS06665	COG1473	amidohydrolase
FFHJCLDM_RS06670	COG1473	amidohydrolase
FFHJCLDM_RS06675	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS06680	COG2840	Smr protein MutS2
FFHJCLDM_RS06685	COG3706	GGDEF domain
FFHJCLDM_RS06695	COG0513	Belongs to the DEAD box helicase family
FFHJCLDM_RS06705	COG0582	viral genome integration into host DNA
FFHJCLDM_RS06725	COG3723	Recombinational DNA repair protein, rece pathway
FFHJCLDM_RS06775	COG3772	lysozyme
FFHJCLDM_RS06785	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FFHJCLDM_RS06790	COG1475	DNA binding
FFHJCLDM_RS06815	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FFHJCLDM_RS06835	COG0589	response to stress
FFHJCLDM_RS06840	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFHJCLDM_RS06845	COG0674	pyruvate-flavodoxin oxidoreductase activity
FFHJCLDM_RS06845	COG1013	pyruvate-flavodoxin oxidoreductase activity
FFHJCLDM_RS06845	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FFHJCLDM_RS06845	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FFHJCLDM_RS06850	COG3042	response to heat
FFHJCLDM_RS06855	COG3187	Heat shock protein
FFHJCLDM_RS06860	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FFHJCLDM_RS06865	COG2911	Protein conserved in bacteria
FFHJCLDM_RS06875	COG3784	Protein of unknown function (DUF1318)
FFHJCLDM_RS06880	COG2207	Transcriptional regulator
FFHJCLDM_RS06885	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS06910	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FFHJCLDM_RS06915	COG4589	Belongs to the CDS family
FFHJCLDM_RS06920	COG2267	carboxylic ester hydrolase activity
FFHJCLDM_RS06925	COG0671	phosphoesterase, PA-phosphatase related
FFHJCLDM_RS06925	COG2453	phosphatase
FFHJCLDM_RS06935	COG1643	Atp-dependent helicase
FFHJCLDM_RS06940	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FFHJCLDM_RS06945	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS06950	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FFHJCLDM_RS06960	COG3038	cytochrome b561
FFHJCLDM_RS06975	COG0840	transmembrane signaling receptor activity
FFHJCLDM_RS06980	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS06985	COG5383	Protein conserved in bacteria
FFHJCLDM_RS06995	COG2841	Protein conserved in bacteria
FFHJCLDM_RS07000	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FFHJCLDM_RS07005	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FFHJCLDM_RS07010	COG1275	C4-dicarboxylate transporter malic acid transport protein
FFHJCLDM_RS07015	COG0500	methyltransferase
FFHJCLDM_RS07030	COG0675	Transposase, IS605 OrfB family
FFHJCLDM_RS07035	COG3135	benzoate transporter
FFHJCLDM_RS07040	COG1396	sequence-specific DNA binding
FFHJCLDM_RS07045	COG0826	peptidase U32
FFHJCLDM_RS07055	COG1724	mRNA binding
FFHJCLDM_RS07060	COG1598	PFAM Uncharacterised protein family UPF0150
FFHJCLDM_RS07065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFHJCLDM_RS07070	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FFHJCLDM_RS07075	COG3842	ATPase activity
FFHJCLDM_RS07080	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFHJCLDM_RS07085	COG1177	transmembrane transport
FFHJCLDM_RS07110	COG3238	Protein conserved in bacteria
FFHJCLDM_RS07115	COG1247	-acetyltransferase
FFHJCLDM_RS07120	COG2130	NADP-dependent
FFHJCLDM_RS07125	COG1802	Transcriptional regulator
FFHJCLDM_RS07130	COG4772	TonB-dependent receptor
FFHJCLDM_RS07135	COG3391	amine dehydrogenase activity
FFHJCLDM_RS07140	COG1113	amino acid transport
FFHJCLDM_RS07145	COG0625	glutathione transferase activity
FFHJCLDM_RS07190	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FFHJCLDM_RS07195	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FFHJCLDM_RS07205	COG2181	nitrate reductase activity
FFHJCLDM_RS07210	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FFHJCLDM_RS07215	COG1140	nitrate reductase beta subunit
FFHJCLDM_RS07220	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FFHJCLDM_RS07225	COG2223	nitrite transmembrane transporter activity
FFHJCLDM_RS07235	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFHJCLDM_RS07240	COG0697	spore germination
FFHJCLDM_RS07250	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS07255	COG2864	formate dehydrogenase
FFHJCLDM_RS07260	COG3093	addiction module antidote protein HigA
FFHJCLDM_RS07265	COG1064	alcohol dehydrogenase
FFHJCLDM_RS07285	COG1764	response to oxidative stress
FFHJCLDM_RS07290	COG4608	Belongs to the ABC transporter superfamily
FFHJCLDM_RS07295	COG0444	Belongs to the ABC transporter superfamily
FFHJCLDM_RS07300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFHJCLDM_RS07305	COG0601	transmembrane transport
FFHJCLDM_RS07310	COG0747	negative chemotaxis
FFHJCLDM_RS07315	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
FFHJCLDM_RS07320	COG2202	Pas domain
FFHJCLDM_RS07320	COG2200	EAL domain
FFHJCLDM_RS07320	COG2199	diguanylate cyclase activity
FFHJCLDM_RS07335	COG1649	PFAM Uncharacterised BCR, COG1649
FFHJCLDM_RS07340	COG0531	amino acid
FFHJCLDM_RS07345	COG0076	glutamate decarboxylase activity
FFHJCLDM_RS07350	COG0612	Peptidase, M16
FFHJCLDM_RS07355	COG4771	TonB-dependent receptor
FFHJCLDM_RS07360	COG4178	(ABC) transporter
FFHJCLDM_RS07370	COG0641	radical SAM
FFHJCLDM_RS07375	COG3119	arylsulfatase activity
FFHJCLDM_RS07380	COG2207	Transcriptional regulator
FFHJCLDM_RS07390	COG0243	molybdopterin cofactor binding
FFHJCLDM_RS07395	COG3539	Fimbrial protein
FFHJCLDM_RS07400	COG3539	Fimbrial protein
FFHJCLDM_RS07405	COG3539	Fimbrial protein
FFHJCLDM_RS07410	COG3188	usher protein
FFHJCLDM_RS07415	COG3188	usher protein
FFHJCLDM_RS07420	COG3188	usher protein
FFHJCLDM_RS07430	COG3539	Fimbrial protein
FFHJCLDM_RS07435	COG3550	peptidyl-serine autophosphorylation
FFHJCLDM_RS07440	COG1396	sequence-specific DNA binding
FFHJCLDM_RS07475	COG3781	membrane
FFHJCLDM_RS07485	COG2199	diguanylate cyclase activity
FFHJCLDM_RS07495	COG2066	Belongs to the glutaminase family
FFHJCLDM_RS07500	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS07505	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS07535	COG1846	Transcriptional regulator
FFHJCLDM_RS07540	COG4977	sequence-specific DNA binding
FFHJCLDM_RS07550	COG0697	spore germination
FFHJCLDM_RS07555	COG2814	Major facilitator Superfamily
FFHJCLDM_RS07565	COG3706	GGDEF domain
FFHJCLDM_RS07570	COG3111	PFAM Bacterial OB fold (BOF) protein
FFHJCLDM_RS07575	COG1546	Belongs to the CinA family
FFHJCLDM_RS07580	COG0339	signal peptide processing
FFHJCLDM_RS07585	COG4221	oxidoreductase activity
FFHJCLDM_RS07590	COG1802	Transcriptional regulator
FFHJCLDM_RS07600	COG0246	Mannitol dehydrogenase
FFHJCLDM_RS07620	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FFHJCLDM_RS07680	COG1403	HNH endonuclease
FFHJCLDM_RS07680	COG1403	HNH endonuclease
FFHJCLDM_RS07705	COG1846	Transcriptional regulator
FFHJCLDM_RS07720	COG1396	sequence-specific DNA binding
FFHJCLDM_RS07770	COG1063	alcohol dehydrogenase
FFHJCLDM_RS07775	COG4948	Mandelate Racemase Muconate Lactonizing
FFHJCLDM_RS07790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FFHJCLDM_RS07805	COG0243	molybdopterin cofactor binding
FFHJCLDM_RS07810	COG0243	molybdopterin cofactor binding
FFHJCLDM_RS07815	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS07820	COG3302	dmso reductase anchor subunit
FFHJCLDM_RS07825	COG3381	protein complex oligomerization
FFHJCLDM_RS07835	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FFHJCLDM_RS07840	COG1940	carbohydrate kinase activity
FFHJCLDM_RS07845	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS07850	COG2814	Major facilitator Superfamily
FFHJCLDM_RS07865	COG3591	Belongs to the peptidase S1B family
FFHJCLDM_RS07880	COG0628	permease
FFHJCLDM_RS07885	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FFHJCLDM_RS07890	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FFHJCLDM_RS07900	COG0531	amino acid
FFHJCLDM_RS07910	COG3136	membrane protein required for alginate biosynthesis
FFHJCLDM_RS07915	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS07920	COG2205	protein histidine kinase activity
FFHJCLDM_RS07930	COG0114	fumarate hydratase activity
FFHJCLDM_RS07935	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FFHJCLDM_RS07935	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FFHJCLDM_RS07940	COG1482	cell wall glycoprotein biosynthetic process
FFHJCLDM_RS07945	COG5339	Protein conserved in bacteria
FFHJCLDM_RS07960	COG3250	beta-galactosidase activity
FFHJCLDM_RS07965	COG1309	transcriptional regulator
FFHJCLDM_RS07970	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS07975	COG1609	Transcriptional regulator
FFHJCLDM_RS07980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS07980	COG1263	PTS System
FFHJCLDM_RS07985	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FFHJCLDM_RS07995	COG0673	inositol 2-dehydrogenase activity
FFHJCLDM_RS08035	COG4659	FMN binding
FFHJCLDM_RS08045	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FFHJCLDM_RS08050	COG3104	oligopeptide transport
FFHJCLDM_RS08055	COG0625	glutathione transferase activity
FFHJCLDM_RS08060	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FFHJCLDM_RS08075	COG3895	Periplasmic Protein
FFHJCLDM_RS08085	COG3133	Outer membrane lipoprotein
FFHJCLDM_RS08100	COG1566	PFAM secretion protein HlyD family protein
FFHJCLDM_RS08105	COG1289	transmembrane transporter activity
FFHJCLDM_RS08110	COG2032	superoxide dismutase activity
FFHJCLDM_RS08115	COG4989	oxidoreductase activity
FFHJCLDM_RS08120	COG3313	Fe-S protein
FFHJCLDM_RS08125	COG1309	transcriptional regulator
FFHJCLDM_RS08130	COG1902	pentaerythritol trinitrate reductase activity
FFHJCLDM_RS08135	COG0346	lactoylglutathione lyase activity
FFHJCLDM_RS08145	COG1201	RNA secondary structure unwinding
FFHJCLDM_RS08150	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FFHJCLDM_RS08160	COG0791	NLP P60 protein
FFHJCLDM_RS08165	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FFHJCLDM_RS08170	COG2814	Major facilitator Superfamily
FFHJCLDM_RS08185	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS08190	COG2814	Major facilitator Superfamily
FFHJCLDM_RS08195	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FFHJCLDM_RS08200	COG0307	riboflavin synthase, alpha
FFHJCLDM_RS08210	COG3468	outer membrane autotransporter barrel domain protein
FFHJCLDM_RS08230	COG4529	Protein conserved in bacteria
FFHJCLDM_RS08240	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FFHJCLDM_RS08245	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS08255	COG2414	aldehyde ferredoxin oxidoreductase
FFHJCLDM_RS08260	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS08270	COG0469	pyruvate kinase activity
FFHJCLDM_RS08275	COG4238	major outer membrane lipoprotein
FFHJCLDM_RS08280	COG1376	ErfK ybiS ycfS ynhG family protein
FFHJCLDM_RS08295	COG0719	Fe-S assembly protein
FFHJCLDM_RS08300	COG0396	ATPase activity
FFHJCLDM_RS08320	COG2050	protein possibly involved in aromatic compounds catabolism
FFHJCLDM_RS08325	COG0277	FAD linked oxidase domain protein
FFHJCLDM_RS08325	COG0247	lactate metabolic process
FFHJCLDM_RS08330	COG0628	permease
FFHJCLDM_RS08350	COG2271	Major facilitator Superfamily
FFHJCLDM_RS08365	COG4670	ketone body catabolic process
FFHJCLDM_RS08370	COG1960	acyl-CoA dehydrogenase activity
FFHJCLDM_RS08375	COG1917	Cupin 2, conserved barrel domain protein
FFHJCLDM_RS08375	COG2207	Transcriptional regulator
FFHJCLDM_RS08380	COG2086	electron transfer activity
FFHJCLDM_RS08385	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FFHJCLDM_RS08390	COG0644	oxidoreductase
FFHJCLDM_RS08395	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FFHJCLDM_RS08400	COG0318	PFAM AMP-dependent synthetase and ligase
FFHJCLDM_RS08405	COG0574	Belongs to the PEP-utilizing enzyme family
FFHJCLDM_RS08405	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FFHJCLDM_RS08415	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FFHJCLDM_RS08420	COG4256	Hemin uptake protein
FFHJCLDM_RS08435	COG0791	NLP P60 protein
FFHJCLDM_RS08445	COG0386	Belongs to the glutathione peroxidase family
FFHJCLDM_RS08460	COG0072	phenylalanine-tRNA ligase activity
FFHJCLDM_RS08460	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FFHJCLDM_RS08505	COG3137	Salt-induced outer membrane protein
FFHJCLDM_RS08510	COG1105	Belongs to the carbohydrate kinase PfkB family
FFHJCLDM_RS08520	COG3001	Fructosamine kinase
FFHJCLDM_RS08530	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFHJCLDM_RS08535	COG1988	membrane-bound metal-dependent
FFHJCLDM_RS08540	COG1823	symporter activity
FFHJCLDM_RS08555	COG0753	catalase activity
FFHJCLDM_RS08565	COG1486	melibiose metabolic process
FFHJCLDM_RS08570	COG2169	Transcriptional regulator
FFHJCLDM_RS08570	COG1917	Cupin 2, conserved barrel domain protein
FFHJCLDM_RS08575	COG1447	Phosphotransferase system cellobiose-specific component IIA
FFHJCLDM_RS08580	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FFHJCLDM_RS08585	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FFHJCLDM_RS08590	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFHJCLDM_RS08600	COG0322	excinuclease ABC activity
FFHJCLDM_RS08610	COG3678	ATP-independent chaperone mediated protein folding
FFHJCLDM_RS08640	COG0708	Exodeoxyribonuclease III
FFHJCLDM_RS08645	COG0398	Pfam SNARE associated Golgi protein
FFHJCLDM_RS08655	COG0398	Pfam SNARE associated Golgi protein
FFHJCLDM_RS08660	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FFHJCLDM_RS08665	COG4134	Bacterial extracellular solute-binding protein
FFHJCLDM_RS08670	COG4135	transport system, permease component
FFHJCLDM_RS08675	COG4136	ATPase activity
FFHJCLDM_RS08680	COG2897	thiosulfate sulfurtransferase activity
FFHJCLDM_RS08685	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FFHJCLDM_RS08690	COG0494	nUDIX hydrolase
FFHJCLDM_RS08700	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FFHJCLDM_RS08710	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FFHJCLDM_RS08720	COG0778	Nitroreductase
FFHJCLDM_RS08725	COG0616	signal peptide processing
FFHJCLDM_RS08730	COG0252	asparaginase activity
FFHJCLDM_RS08735	COG1335	isochorismatase
FFHJCLDM_RS08740	COG2814	Major facilitator Superfamily
FFHJCLDM_RS08745	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS08750	COG0667	Aldo Keto reductase
FFHJCLDM_RS08755	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS08760	COG0191	fructose-bisphosphate aldolase activity
FFHJCLDM_RS08765	COG1063	alcohol dehydrogenase
FFHJCLDM_RS08770	COG2271	Major facilitator Superfamily
FFHJCLDM_RS08775	COG1063	alcohol dehydrogenase
FFHJCLDM_RS08780	COG3139	Protein of unknown function (DUF1315)
FFHJCLDM_RS08790	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FFHJCLDM_RS08795	COG0676	glucose-6-phosphate 1-epimerase activity
FFHJCLDM_RS08800	COG0656	L-ascorbic acid biosynthetic process
FFHJCLDM_RS08805	COG3713	MltA-interacting MipA family protein
FFHJCLDM_RS08820	COG2199	diguanylate cyclase activity
FFHJCLDM_RS08825	COG2199	diguanylate cyclase activity
FFHJCLDM_RS08830	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FFHJCLDM_RS08845	COG2207	Transcriptional regulator
FFHJCLDM_RS08850	COG2807	transmembrane transport
FFHJCLDM_RS08855	COG3189	MarR family transcriptional regulator
FFHJCLDM_RS08860	COG3042	response to heat
FFHJCLDM_RS08865	COG2203	Gaf domain
FFHJCLDM_RS08865	COG2199	diguanylate cyclase activity
FFHJCLDM_RS08880	COG2261	transglycosylase associated protein
FFHJCLDM_RS08895	COG3385	transposase activity
FFHJCLDM_RS08900	COG3615	Tellurite resistance protein tehB
FFHJCLDM_RS08910	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS08915	COG0473	3-isopropylmalate dehydrogenase activity
FFHJCLDM_RS08925	COG4638	Rieske (2fe-2S)
FFHJCLDM_RS08930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FFHJCLDM_RS08935	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FFHJCLDM_RS08940	COG0318	PFAM AMP-dependent synthetase and ligase
FFHJCLDM_RS08945	COG3065	identical protein binding
FFHJCLDM_RS08950	COG1214	PFAM Peptidase M22, glycoprotease
FFHJCLDM_RS08955	COG1199	ATP-dependent helicase activity
FFHJCLDM_RS08960	COG0251	oxidation-reduction process
FFHJCLDM_RS08975	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FFHJCLDM_RS08985	COG1760	l-serine dehydratase
FFHJCLDM_RS08990	COG2200	EAL domain
FFHJCLDM_RS08995	COG1253	flavin adenine dinucleotide binding
FFHJCLDM_RS09000	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS09000	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS09005	COG3715	PTS system
FFHJCLDM_RS09010	COG3716	PTS system mannose fructose sorbose family IID component
FFHJCLDM_RS09025	COG2226	methyltransferase
FFHJCLDM_RS09055	COG1414	Transcriptional regulator
FFHJCLDM_RS09060	COG2814	Major facilitator Superfamily
FFHJCLDM_RS09070	COG0793	Belongs to the peptidase S41A family
FFHJCLDM_RS09080	COG1956	GAF domain-containing protein
FFHJCLDM_RS09085	COG2995	paraquat-inducible protein a
FFHJCLDM_RS09090	COG3008	intermembrane lipid transfer
FFHJCLDM_RS09110	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FFHJCLDM_RS09120	COG1276	copper resistance
FFHJCLDM_RS09125	COG2372	response to copper ion
FFHJCLDM_RS09135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FFHJCLDM_RS09140	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FFHJCLDM_RS09145	COG1770	oligopeptidase
FFHJCLDM_RS09150	COG2979	Protein of unknown function (DUF533)
FFHJCLDM_RS09160	COG3141	response to X-ray
FFHJCLDM_RS09170	COG0800	Aldolase
FFHJCLDM_RS09175	COG0129	dihydroxy-acid dehydratase activity
FFHJCLDM_RS09180	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FFHJCLDM_RS09185	COG1737	Transcriptional regulator
FFHJCLDM_RS09190	COG0469	pyruvate kinase activity
FFHJCLDM_RS09195	COG1560	Kdo2-lipid A biosynthetic process
FFHJCLDM_RS09200	COG0739	heme binding
FFHJCLDM_RS09205	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FFHJCLDM_RS09215	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FFHJCLDM_RS09245	COG0217	transcriptional regulatory protein
FFHJCLDM_RS09250	COG0494	nUDIX hydrolase
FFHJCLDM_RS09260	COG1335	isochorismatase
FFHJCLDM_RS09265	COG1801	Protein of unknown function DUF72
FFHJCLDM_RS09270	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FFHJCLDM_RS09285	COG0243	molybdopterin cofactor binding
FFHJCLDM_RS09290	COG3005	denitrification pathway
FFHJCLDM_RS09300	COG3102	Protein conserved in bacteria
FFHJCLDM_RS09310	COG3755	Protein conserved in bacteria
FFHJCLDM_RS09320	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FFHJCLDM_RS09325	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FFHJCLDM_RS09330	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FFHJCLDM_RS09335	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS09345	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FFHJCLDM_RS09350	COG0840	transmembrane signaling receptor activity
FFHJCLDM_RS09355	COG0840	transmembrane signaling receptor activity
FFHJCLDM_RS09360	COG0835	chemotaxis
FFHJCLDM_RS09365	COG0643	Histidine kinase
FFHJCLDM_RS09365	COG2198	Histidine kinase
FFHJCLDM_RS09370	COG1360	Flagellar Motor Protein
FFHJCLDM_RS09375	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FFHJCLDM_RS09390	COG0589	response to stress
FFHJCLDM_RS09400	COG1877	trehalose-phosphatase activity
FFHJCLDM_RS09405	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS09410	COG1129	ABC transporter
FFHJCLDM_RS09415	COG1879	ABC-type sugar transport system periplasmic component
FFHJCLDM_RS09420	COG1528	Iron-storage protein
FFHJCLDM_RS09440	COG1528	Iron-storage protein
FFHJCLDM_RS09450	COG0814	amino acid
FFHJCLDM_RS09455	COG3318	Belongs to the UPF0149 family
FFHJCLDM_RS09455	COG3012	SEC-C Motif Domain Protein
FFHJCLDM_RS09500	COG2205	protein histidine kinase activity
FFHJCLDM_RS09505	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS09510	COG2351	hydroxyisourate hydrolase activity
FFHJCLDM_RS09525	COG3443	Belongs to the bacterial solute-binding protein 9 family
FFHJCLDM_RS09530	COG3038	cytochrome b561
FFHJCLDM_RS09550	COG1388	LysM domain
FFHJCLDM_RS09550	COG1470	cell adhesion involved in biofilm formation
FFHJCLDM_RS09560	COG0477	Major facilitator Superfamily
FFHJCLDM_RS09565	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FFHJCLDM_RS09570	COG0217	transcriptional regulatory protein
FFHJCLDM_RS09580	COG0534	Mate efflux family protein
FFHJCLDM_RS09590	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS09595	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS09605	COG1376	ErfK ybiS ycfS ynhG family protein
FFHJCLDM_RS09620	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
FFHJCLDM_RS09670	COG1289	transmembrane transporter activity
FFHJCLDM_RS09680	COG1686	Belongs to the peptidase S11 family
FFHJCLDM_RS09685	COG2925	Exonuclease
FFHJCLDM_RS09690	COG0425	Belongs to the sulfur carrier protein TusA family
FFHJCLDM_RS09695	COG2391	methyltransferase activity
FFHJCLDM_RS09700	COG0531	amino acid
FFHJCLDM_RS09710	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS09715	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FFHJCLDM_RS09730	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FFHJCLDM_RS09740	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FFHJCLDM_RS09740	COG0131	Imidazoleglycerol-phosphate dehydratase
FFHJCLDM_RS09745	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FFHJCLDM_RS09760	COG0140	phosphoribosyl-ATP diphosphatase activity
FFHJCLDM_RS09760	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FFHJCLDM_RS09765	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FFHJCLDM_RS09770	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FFHJCLDM_RS09775	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FFHJCLDM_RS09780	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FFHJCLDM_RS09830	COG2244	polysaccharide biosynthetic process
FFHJCLDM_RS09840	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FFHJCLDM_RS09850	COG1088	dTDP-glucose 4,6-dehydratase activity
FFHJCLDM_RS09855	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FFHJCLDM_RS09865	COG0438	transferase activity, transferring glycosyl groups
FFHJCLDM_RS09870	COG2327	Polysaccharide pyruvyl transferase
FFHJCLDM_RS09875	COG2244	polysaccharide biosynthetic process
FFHJCLDM_RS09880	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FFHJCLDM_RS09885	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FFHJCLDM_RS09890	COG0662	Cupin 2, conserved barrel domain protein
FFHJCLDM_RS09890	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
FFHJCLDM_RS09895	COG0297	glycogen (starch) synthase activity
FFHJCLDM_RS09900	COG1051	belongs to the nudix hydrolase family
FFHJCLDM_RS09905	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FFHJCLDM_RS09910	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FFHJCLDM_RS09915	COG0110	maltose O-acetyltransferase activity
FFHJCLDM_RS09920	COG1216	Glycosyl transferase, family 2
FFHJCLDM_RS09930	COG0438	transferase activity, transferring glycosyl groups
FFHJCLDM_RS09935	COG1045	serine acetyltransferase
FFHJCLDM_RS09940	COG0463	Glycosyl transferase, family 2
FFHJCLDM_RS09945	COG0489	protein tyrosine kinase activity
FFHJCLDM_RS09945	COG3206	protein involved in exopolysaccharide biosynthesis
FFHJCLDM_RS09950	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FFHJCLDM_RS09955	COG1596	polysaccharide export
FFHJCLDM_RS09960	COG1253	flavin adenine dinucleotide binding
FFHJCLDM_RS09965	COG2982	Protein involved in outer membrane biogenesis
FFHJCLDM_RS09975	COG0572	uridine kinase
FFHJCLDM_RS09980	COG3447	MASE1 domain protein
FFHJCLDM_RS09980	COG5001	Diguanylate cyclase
FFHJCLDM_RS09980	COG5002	protein histidine kinase activity
FFHJCLDM_RS09985	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FFHJCLDM_RS09990	COG0443	Heat shock 70 kDa protein
FFHJCLDM_RS09995	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
FFHJCLDM_RS10000	COG0631	protein serine/threonine phosphatase activity
FFHJCLDM_RS10005	COG4245	von Willebrand factor, type A
FFHJCLDM_RS10050	COG2205	protein histidine kinase activity
FFHJCLDM_RS10055	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS10065	COG0826	peptidase U32
FFHJCLDM_RS10095	COG1063	alcohol dehydrogenase
FFHJCLDM_RS10100	COG3775	system Galactitol-specific IIC component
FFHJCLDM_RS10105	COG3414	Phosphotransferase system galactitol-specific IIB component
FFHJCLDM_RS10110	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS10125	COG1830	Aldolase
FFHJCLDM_RS10130	COG2211	Major facilitator Superfamily
FFHJCLDM_RS10135	COG1397	ADP-ribosylglycohydrolase
FFHJCLDM_RS10140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS10145	COG2188	Transcriptional regulator
FFHJCLDM_RS10150	COG3757	hydrolase, family 25
FFHJCLDM_RS10155	COG0351	phosphomethylpyrimidine kinase
FFHJCLDM_RS10205	COG0489	protein tyrosine kinase activity
FFHJCLDM_RS10215	COG3831	ATPase activity
FFHJCLDM_RS10220	COG3831	ATPase activity
FFHJCLDM_RS10230	COG0714	Associated with various cellular activities
FFHJCLDM_RS10235	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FFHJCLDM_RS10240	COG3552	Protein containing von Willebrand factor type A (VWA) domain
FFHJCLDM_RS10245	COG4715	Zinc finger, swim domain protein
FFHJCLDM_RS10250	COG4808	Protein conserved in bacteria
FFHJCLDM_RS10255	COG4807	Protein conserved in bacteria
FFHJCLDM_RS10260	COG3279	Response regulator of the LytR AlgR family
FFHJCLDM_RS10265	COG3275	phosphorelay sensor kinase activity
FFHJCLDM_RS10270	COG0789	Transcriptional regulator
FFHJCLDM_RS10280	COG1174	glycine betaine transport
FFHJCLDM_RS10285	COG1125	glycine betaine transport
FFHJCLDM_RS10290	COG1174	glycine betaine transport
FFHJCLDM_RS10295	COG1732	Glycine betaine
FFHJCLDM_RS10300	COG1472	Belongs to the glycosyl hydrolase 3 family
FFHJCLDM_RS10305	COG0277	FAD linked oxidase domain protein
FFHJCLDM_RS10310	COG1686	Belongs to the peptidase S11 family
FFHJCLDM_RS10320	COG0586	Pfam SNARE associated Golgi protein
FFHJCLDM_RS10325	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS10340	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FFHJCLDM_RS10350	COG1346	cytolysis
FFHJCLDM_RS10360	COG2949	membrane
FFHJCLDM_RS10370	COG0493	'glutamate synthase
FFHJCLDM_RS10375	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FFHJCLDM_RS10375	COG0167	dihydroorotate dehydrogenase activity
FFHJCLDM_RS10380	COG4211	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS10385	COG1129	ABC transporter
FFHJCLDM_RS10395	COG1609	Transcriptional regulator
FFHJCLDM_RS10400	COG2311	Membrane
FFHJCLDM_RS10415	COG4771	TonB-dependent receptor
FFHJCLDM_RS10420	COG0833	amino acid
FFHJCLDM_RS10425	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS10430	COG2855	membrane
FFHJCLDM_RS10440	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS10440	COG1522	sequence-specific DNA binding
FFHJCLDM_RS10445	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FFHJCLDM_RS10455	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FFHJCLDM_RS10460	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FFHJCLDM_RS10465	COG2313	pseudouridylate synthase activity
FFHJCLDM_RS10470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS10475	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS10475	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FFHJCLDM_RS10475	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS10480	COG1105	Belongs to the carbohydrate kinase PfkB family
FFHJCLDM_RS10485	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS10485	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS10490	COG2814	Major facilitator Superfamily
FFHJCLDM_RS10505	COG0246	Mannitol dehydrogenase
FFHJCLDM_RS10510	COG0523	cobalamin synthesis protein
FFHJCLDM_RS10515	COG0671	phosphoesterase, PA-phosphatase related
FFHJCLDM_RS10520	COG0791	NLP P60 protein
FFHJCLDM_RS10525	COG2200	EAL domain
FFHJCLDM_RS10530	COG4166	transmembrane transport
FFHJCLDM_RS10535	COG4174	ABC transporter (Permease)
FFHJCLDM_RS10540	COG4239	(ABC) transporter, permease
FFHJCLDM_RS10545	COG4172	Belongs to the ABC transporter superfamily
FFHJCLDM_RS10555	COG2814	Major facilitator Superfamily
FFHJCLDM_RS10560	COG1187	pseudouridine synthase activity
FFHJCLDM_RS10565	COG1061	Type III restriction enzyme res subunit
FFHJCLDM_RS10585	COG3083	sulfuric ester hydrolase activity
FFHJCLDM_RS10595	COG3468	outer membrane autotransporter barrel domain protein
FFHJCLDM_RS10600	COG2197	response regulator
FFHJCLDM_RS10605	COG3088	subunit of a heme lyase
FFHJCLDM_RS10605	COG4235	cytochrome complex assembly
FFHJCLDM_RS10610	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FFHJCLDM_RS10615	COG1138	Cytochrome C-type biogenesis protein
FFHJCLDM_RS10625	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FFHJCLDM_RS10630	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FFHJCLDM_RS10635	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FFHJCLDM_RS10640	COG4133	protoheme IX ABC transporter activity
FFHJCLDM_RS10645	COG3005	denitrification pathway
FFHJCLDM_RS10650	COG3043	anaerobic respiration
FFHJCLDM_RS10655	COG0348	domain, Protein
FFHJCLDM_RS10660	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS10670	COG3062	negative regulation of establishment of protein localization
FFHJCLDM_RS10675	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS10675	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS10690	COG4615	Cyclic peptide transporter
FFHJCLDM_RS10695	COG3145	DNA-N1-methyladenine dioxygenase activity
FFHJCLDM_RS10700	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FFHJCLDM_RS10700	COG2169	Transcriptional regulator
FFHJCLDM_RS10705	COG1477	protein flavinylation
FFHJCLDM_RS10710	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFHJCLDM_RS10720	COG2205	protein histidine kinase activity
FFHJCLDM_RS10720	COG0784	Response regulator, receiver
FFHJCLDM_RS10725	COG3852	Histidine kinase
FFHJCLDM_RS10730	COG2204	response regulator
FFHJCLDM_RS10735	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FFHJCLDM_RS10740	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FFHJCLDM_RS10745	COG2031	fatty acid transporter
FFHJCLDM_RS10750	COG0183	Belongs to the thiolase family
FFHJCLDM_RS10755	COG4676	Protein conserved in bacteria
FFHJCLDM_RS10760	COG5445	Predicted secreted protein (DUF2300)
FFHJCLDM_RS10765	COG2373	Large extracellular alpha-helical protein
FFHJCLDM_RS10770	COG3234	Protein of unknown function (DUF1175)
FFHJCLDM_RS10775	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
FFHJCLDM_RS10780	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FFHJCLDM_RS10790	COG3468	outer membrane autotransporter barrel domain protein
FFHJCLDM_RS10795	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FFHJCLDM_RS10800	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FFHJCLDM_RS10805	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FFHJCLDM_RS10810	COG3642	lipopolysaccharide core region biosynthetic process
FFHJCLDM_RS10820	COG0584	glycerophosphoryl diester phosphodiesterase
FFHJCLDM_RS10825	COG2271	Major facilitator Superfamily
FFHJCLDM_RS10830	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FFHJCLDM_RS10840	COG0247	lactate metabolic process
FFHJCLDM_RS10845	COG5464	transposase or invertase
FFHJCLDM_RS10855	COG2271	Major facilitator Superfamily
FFHJCLDM_RS10865	COG1414	Transcriptional regulator
FFHJCLDM_RS10930	COG0318	PFAM AMP-dependent synthetase and ligase
FFHJCLDM_RS10940	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FFHJCLDM_RS10955	COG1169	isochorismate synthase
FFHJCLDM_RS10960	COG4575	ribosome binding
FFHJCLDM_RS10965	COG2153	protein acetylation
FFHJCLDM_RS10975	COG5160	protein modification by small protein removal
FFHJCLDM_RS11000	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FFHJCLDM_RS11005	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FFHJCLDM_RS11015	COG0839	Belongs to the complex I subunit 6 family
FFHJCLDM_RS11030	COG1034	ATP synthesis coupled electron transport
FFHJCLDM_RS11035	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FFHJCLDM_RS11040	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FFHJCLDM_RS11060	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS11065	COG0436	Aminotransferase
FFHJCLDM_RS11075	COG0471	metal ion transport
FFHJCLDM_RS11075	COG0490	domain, Protein
FFHJCLDM_RS11080	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFHJCLDM_RS11095	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FFHJCLDM_RS11100	COG0280	phosphate acetyltransferase
FFHJCLDM_RS11100	COG0857	belongs to the CobB CobQ family
FFHJCLDM_RS11105	COG1288	antiporter activity
FFHJCLDM_RS11110	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FFHJCLDM_RS11115	COG0622	Phosphoesterase
FFHJCLDM_RS11120	COG0625	glutathione transferase activity
FFHJCLDM_RS11125	COG0625	glutathione transferase activity
FFHJCLDM_RS11130	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FFHJCLDM_RS11135	COG1090	epimerase
FFHJCLDM_RS11140	COG5464	transposase or invertase
FFHJCLDM_RS11145	COG4598	ABC transporter
FFHJCLDM_RS11150	COG4160	amino acid transport
FFHJCLDM_RS11155	COG4215	(ABC) transporter
FFHJCLDM_RS11160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS11165	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS11170	COG0163	prenyltransferase activity
FFHJCLDM_RS11175	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FFHJCLDM_RS11180	COG1286	toxin biosynthetic process
FFHJCLDM_RS11185	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FFHJCLDM_RS11190	COG0285	dihydrofolate synthase activity
FFHJCLDM_RS11200	COG0586	Pfam SNARE associated Golgi protein
FFHJCLDM_RS11210	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FFHJCLDM_RS11225	COG2814	Major facilitator Superfamily
FFHJCLDM_RS11230	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FFHJCLDM_RS11245	COG3101	peptidyl-lysine hydroxylation
FFHJCLDM_RS11250	COG0730	response to heat
FFHJCLDM_RS11280	COG3539	Fimbrial protein
FFHJCLDM_RS11285	COG3539	Fimbrial protein
FFHJCLDM_RS11290	COG3539	Fimbrial protein
FFHJCLDM_RS11295	COG3121	Chaperone
FFHJCLDM_RS11300	COG3188	usher protein
FFHJCLDM_RS11305	COG3539	Fimbrial protein
FFHJCLDM_RS11310	COG2062	phosphohistidine phosphatase, SixA
FFHJCLDM_RS11325	COG3691	Protein conserved in bacteria
FFHJCLDM_RS11330	COG2067	long-chain fatty acid transport protein
FFHJCLDM_RS11350	COG2853	Lipoprotein
FFHJCLDM_RS11355	COG2116	formate transmembrane transporter activity
FFHJCLDM_RS11365	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS11370	COG2610	gluconate transmembrane transporter activity
FFHJCLDM_RS11380	COG0477	Major facilitator Superfamily
FFHJCLDM_RS11385	COG1566	PFAM secretion protein HlyD family protein
FFHJCLDM_RS11390	COG2197	response regulator
FFHJCLDM_RS11395	COG0784	Response regulator, receiver
FFHJCLDM_RS11395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS11395	COG2198	Histidine kinase
FFHJCLDM_RS11395	COG2205	protein histidine kinase activity
FFHJCLDM_RS11400	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FFHJCLDM_RS11405	COG0679	Auxin Efflux Carrier
FFHJCLDM_RS11410	COG0028	Belongs to the TPP enzyme family
FFHJCLDM_RS11435	COG1560	Kdo2-lipid A biosynthetic process
FFHJCLDM_RS11445	COG0436	Aminotransferase
FFHJCLDM_RS11450	COG3275	phosphorelay sensor kinase activity
FFHJCLDM_RS11455	COG3279	Response regulator of the LytR AlgR family
FFHJCLDM_RS11460	COG2207	Transcriptional regulator
FFHJCLDM_RS11465	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS11465	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS11465	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FFHJCLDM_RS11470	COG1363	Peptidase, m42
FFHJCLDM_RS11475	COG0006	proline dipeptidase activity
FFHJCLDM_RS11480	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS11485	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS11510	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FFHJCLDM_RS11515	COG2199	diguanylate cyclase activity
FFHJCLDM_RS11515	COG2200	EAL domain
FFHJCLDM_RS11530	COG3415	Transposase
FFHJCLDM_RS11535	COG3415	Transposase
FFHJCLDM_RS11570	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS11575	COG0385	Bile acid
FFHJCLDM_RS11580	COG3530	Putative quorum-sensing-regulated virulence factor
FFHJCLDM_RS11600	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FFHJCLDM_RS11605	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS11610	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FFHJCLDM_RS11615	COG2190	(PTS) system
FFHJCLDM_RS11630	COG4884	unkown
FFHJCLDM_RS11630	COG3831	ATPase activity
FFHJCLDM_RS11635	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FFHJCLDM_RS11640	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FFHJCLDM_RS11645	COG4208	sulfate ABC transporter
FFHJCLDM_RS11650	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FFHJCLDM_RS11655	COG4150	thiosulfate binding
FFHJCLDM_RS11660	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS11665	COG1737	Transcriptional regulator
FFHJCLDM_RS11675	COG1263	PTS System
FFHJCLDM_RS11675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS11680	COG2837	iron assimilation
FFHJCLDM_RS11700	COG0860	N-Acetylmuramoyl-L-alanine amidase
FFHJCLDM_RS11710	COG2207	Transcriptional regulator
FFHJCLDM_RS11715	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FFHJCLDM_RS11720	COG4816	utilization protein
FFHJCLDM_RS11730	COG4303	Ethanolamine ammonia lyase large subunit
FFHJCLDM_RS11735	COG4819	ethanolamine utilization protein
FFHJCLDM_RS11740	COG3192	ethanolamine utilization protein
FFHJCLDM_RS11745	COG1454	alcohol dehydrogenase
FFHJCLDM_RS11750	COG4820	ethanolamine utilization protein (EutJ)
FFHJCLDM_RS11755	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS11760	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
FFHJCLDM_RS11765	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FFHJCLDM_RS11770	COG0280	phosphate acetyltransferase
FFHJCLDM_RS11775	COG4812	Cobalamin adenosyltransferase
FFHJCLDM_RS11780	COG4766	ethanolamine catabolic process
FFHJCLDM_RS11785	COG4917	ethanolamine utilization protein
FFHJCLDM_RS11790	COG4810	utilization protein
FFHJCLDM_RS11795	COG0280	phosphate acetyltransferase
FFHJCLDM_RS11795	COG0281	malic enzyme
FFHJCLDM_RS11800	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FFHJCLDM_RS11805	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FFHJCLDM_RS11810	COG5342	invasion associated locus B
FFHJCLDM_RS11820	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS11820	COG0493	'glutamate synthase
FFHJCLDM_RS11825	COG3850	Histidine kinase
FFHJCLDM_RS11830	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFHJCLDM_RS11840	COG1393	Belongs to the ArsC family
FFHJCLDM_RS11855	COG0400	carboxylic ester hydrolase activity
FFHJCLDM_RS11860	COG1444	tRNA N-acetyltransferase activity
FFHJCLDM_RS11865	COG2321	neutral zinc metallopeptidase
FFHJCLDM_RS11875	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FFHJCLDM_RS11885	COG2716	regulation of RNA biosynthetic process
FFHJCLDM_RS11890	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FFHJCLDM_RS11895	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS11900	COG0651	ATP synthesis coupled electron transport
FFHJCLDM_RS11910	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FFHJCLDM_RS11915	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FFHJCLDM_RS11920	COG4237	Hydrogenase 4 membrane
FFHJCLDM_RS11925	COG0651	ATP synthesis coupled electron transport
FFHJCLDM_RS11930	COG3261	NADH dehydrogenase
FFHJCLDM_RS11930	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FFHJCLDM_RS11935	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FFHJCLDM_RS11940	COG3260	NADH ubiquinone oxidoreductase 20
FFHJCLDM_RS11950	COG3604	Transcriptional regulator
FFHJCLDM_RS11955	COG2116	formate transmembrane transporter activity
FFHJCLDM_RS11960	COG0628	permease
FFHJCLDM_RS11965	COG4783	chaperone-mediated protein folding
FFHJCLDM_RS11970	COG1393	Belongs to the ArsC family
FFHJCLDM_RS11980	COG2233	PERMEase
FFHJCLDM_RS11995	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FFHJCLDM_RS12000	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FFHJCLDM_RS12005	COG0248	Ppx GppA phosphatase
FFHJCLDM_RS12010	COG2200	EAL domain
FFHJCLDM_RS12025	COG3133	Outer membrane lipoprotein
FFHJCLDM_RS12040	COG0516	GMP reductase activity
FFHJCLDM_RS12040	COG0517	IMP dehydrogenase activity
FFHJCLDM_RS12050	COG1645	bacterial-type flagellum-dependent swarming motility
FFHJCLDM_RS12065	COG2976	Protein conserved in bacteria
FFHJCLDM_RS12095	COG4953	penicillin-binding protein 1C
FFHJCLDM_RS12100	COG2373	Large extracellular alpha-helical protein
FFHJCLDM_RS12105	COG2897	thiosulfate sulfurtransferase activity
FFHJCLDM_RS12125	COG2975	iron-sulfur cluster assembly
FFHJCLDM_RS12130	COG0633	Ferredoxin
FFHJCLDM_RS12150	COG0822	iron-sulfur transferase activity
FFHJCLDM_RS12170	COG0483	inositol monophosphate 1-phosphatase activity
FFHJCLDM_RS12175	COG1073	alpha beta
FFHJCLDM_RS12180	COG3711	transcriptional antiterminator
FFHJCLDM_RS12185	COG2814	Major facilitator Superfamily
FFHJCLDM_RS12190	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS12195	COG4638	Rieske (2fe-2S)
FFHJCLDM_RS12220	COG2259	Doxx family
FFHJCLDM_RS12225	COG2017	converts alpha-aldose to the beta-anomer
FFHJCLDM_RS12230	COG1063	alcohol dehydrogenase
FFHJCLDM_RS12235	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS12240	COG1129	ABC transporter
FFHJCLDM_RS12245	COG1879	ABC-type sugar transport system periplasmic component
FFHJCLDM_RS12250	COG0457	Tetratricopeptide repeat
FFHJCLDM_RS12255	COG1940	carbohydrate kinase activity
FFHJCLDM_RS12265	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FFHJCLDM_RS12265	COG1017	nitric oxide dioxygenase activity
FFHJCLDM_RS12270	COG0347	Belongs to the P(II) protein family
FFHJCLDM_RS12275	COG2204	response regulator
FFHJCLDM_RS12280	COG3170	Tfp pilus assembly protein FimV
FFHJCLDM_RS12285	COG2205	protein histidine kinase activity
FFHJCLDM_RS12310	COG0560	Phosphoserine phosphatase
FFHJCLDM_RS12315	COG1737	Transcriptional regulator
FFHJCLDM_RS12320	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS12335	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FFHJCLDM_RS12355	COG0681	Belongs to the peptidase S26 family
FFHJCLDM_RS12365	COG3086	response to oxidative stress
FFHJCLDM_RS12370	COG3026	antisigma factor binding
FFHJCLDM_RS12375	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FFHJCLDM_RS12380	COG1595	DNA-templated transcription, initiation
FFHJCLDM_RS12390	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FFHJCLDM_RS12400	COG0513	Belongs to the DEAD box helicase family
FFHJCLDM_RS12405	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS12425	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FFHJCLDM_RS12430	COG3118	belongs to the thioredoxin family
FFHJCLDM_RS12435	COG3148	PFAM DTW domain containing protein
FFHJCLDM_RS12440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FFHJCLDM_RS12440	COG1042	CoA-binding domain protein
FFHJCLDM_RS12440	COG0045	succinate-CoA ligase (ADP-forming) activity
FFHJCLDM_RS12445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FFHJCLDM_RS12450	COG5544	Lipoprotein
FFHJCLDM_RS12455	COG0477	Major facilitator Superfamily
FFHJCLDM_RS12480	COG0542	response to heat
FFHJCLDM_RS12490	COG0564	pseudouridine synthase activity
FFHJCLDM_RS12495	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFHJCLDM_RS12500	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FFHJCLDM_RS12510	COG0077	Prephenate dehydratase
FFHJCLDM_RS12510	COG1605	Chorismate mutase
FFHJCLDM_RS12515	COG0287	Prephenate dehydrogenase
FFHJCLDM_RS12515	COG1605	Chorismate mutase
FFHJCLDM_RS12520	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FFHJCLDM_RS12535	COG2199	diguanylate cyclase activity
FFHJCLDM_RS12540	COG2885	chlorophyll binding
FFHJCLDM_RS12565	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FFHJCLDM_RS12570	COG4137	Cytochrome C assembly protein
FFHJCLDM_RS12575	COG4536	flavin adenine dinucleotide binding
FFHJCLDM_RS12590	COG0497	DNA recombination
FFHJCLDM_RS12595	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFHJCLDM_RS12605	COG2867	negative regulation of translational initiation
FFHJCLDM_RS12620	COG0582	viral genome integration into host DNA
FFHJCLDM_RS12630	COG1475	DNA binding
FFHJCLDM_RS12650	COG0579	oxidoreductase
FFHJCLDM_RS12655	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS12660	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FFHJCLDM_RS12665	COG1113	amino acid transport
FFHJCLDM_RS12670	COG1802	Transcriptional regulator
FFHJCLDM_RS12675	COG1652	LysM domain
FFHJCLDM_RS12680	COG0401	homolog of Blt101
FFHJCLDM_RS12685	COG0640	Transcriptional regulator
FFHJCLDM_RS12690	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FFHJCLDM_RS12695	COG2916	Histone family protein nucleoid-structuring protein H-NS
FFHJCLDM_RS12710	COG4575	ribosome binding
FFHJCLDM_RS12715	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FFHJCLDM_RS12725	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FFHJCLDM_RS12730	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FFHJCLDM_RS12735	COG4175	Glycine betaine
FFHJCLDM_RS12740	COG4176	ABC-type proline glycine betaine transport system permease component
FFHJCLDM_RS12745	COG2113	Glycine betaine
FFHJCLDM_RS12750	COG2814	Major facilitator Superfamily
FFHJCLDM_RS12755	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FFHJCLDM_RS12765	COG1846	Transcriptional regulator
FFHJCLDM_RS12770	COG1566	PFAM secretion protein HlyD family protein
FFHJCLDM_RS12775	COG2814	Major facilitator Superfamily
FFHJCLDM_RS12790	COG1238	metal cluster binding
FFHJCLDM_RS12795	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFHJCLDM_RS12825	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FFHJCLDM_RS12845	COG1546	Belongs to the CinA family
FFHJCLDM_RS12850	COG2951	lytic endotransglycosylase activity
FFHJCLDM_RS12855	COG3730	PTS system glucitol sorbitol-specific
FFHJCLDM_RS12860	COG3732	PTS system glucitol sorbitol-specific
FFHJCLDM_RS12870	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS12875	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS12880	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS12885	COG0517	IMP dehydrogenase activity
FFHJCLDM_RS12885	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FFHJCLDM_RS12905	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FFHJCLDM_RS12910	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS12915	COG1609	Transcriptional regulator
FFHJCLDM_RS12920	COG1263	PTS System
FFHJCLDM_RS12920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS12925	COG2723	6-phospho-beta-galactosidase activity
FFHJCLDM_RS12930	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FFHJCLDM_RS12940	COG3260	NADH ubiquinone oxidoreductase 20
FFHJCLDM_RS12945	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FFHJCLDM_RS12950	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FFHJCLDM_RS12950	COG3261	NADH dehydrogenase
FFHJCLDM_RS12955	COG0650	Formate hydrogenlyase subunit 4
FFHJCLDM_RS12960	COG0651	ATP synthesis coupled electron transport
FFHJCLDM_RS12965	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS12975	COG0375	protein maturation
FFHJCLDM_RS12980	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FFHJCLDM_RS12985	COG0298	carbon dioxide binding
FFHJCLDM_RS12990	COG0409	Hydrogenase expression formation protein
FFHJCLDM_RS12995	COG0309	Hydrogenase expression formation protein (HypE)
FFHJCLDM_RS13000	COG3604	Transcriptional regulator
FFHJCLDM_RS13020	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FFHJCLDM_RS13025	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS13030	COG2084	Dehydrogenase
FFHJCLDM_RS13035	COG3395	kinase activity
FFHJCLDM_RS13040	COG0235	Class ii aldolase
FFHJCLDM_RS13045	COG3622	Belongs to the hyi family
FFHJCLDM_RS13050	COG2610	gluconate transmembrane transporter activity
FFHJCLDM_RS13055	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FFHJCLDM_RS13060	COG1388	LysM domain
FFHJCLDM_RS13060	COG4942	peptidase
FFHJCLDM_RS13115	COG2234	aminopeptidase activity
FFHJCLDM_RS13120	COG3385	transposase activity
FFHJCLDM_RS13135	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FFHJCLDM_RS13145	COG0720	synthase
FFHJCLDM_RS13150	COG0644	oxidoreductase
FFHJCLDM_RS13155	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FFHJCLDM_RS13160	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FFHJCLDM_RS13165	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FFHJCLDM_RS13170	COG2086	electron transfer activity
FFHJCLDM_RS13175	COG0477	Major facilitator Superfamily
FFHJCLDM_RS13180	COG0277	FAD linked oxidase domain protein
FFHJCLDM_RS13185	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS13190	COG2223	nitrite transmembrane transporter activity
FFHJCLDM_RS13195	COG1070	Carbohydrate kinase
FFHJCLDM_RS13200	COG0602	queuosine metabolic process
FFHJCLDM_RS13210	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FFHJCLDM_RS13225	COG3956	TIGRFAM MazG family protein
FFHJCLDM_RS13230	COG2337	Toxic component of a toxin-antitoxin (TA) module
FFHJCLDM_RS13235	COG2336	PFAM SpoVT AbrB
FFHJCLDM_RS13240	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FFHJCLDM_RS13245	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FFHJCLDM_RS13250	COG3437	response regulator, receiver
FFHJCLDM_RS13250	COG2205	protein histidine kinase activity
FFHJCLDM_RS13250	COG3850	Histidine kinase
FFHJCLDM_RS13250	COG4999	Histidine kinase
FFHJCLDM_RS13255	COG4948	Mandelate Racemase Muconate Lactonizing
FFHJCLDM_RS13260	COG4948	Mandelate Racemase Muconate Lactonizing
FFHJCLDM_RS13265	COG2271	Major facilitator Superfamily
FFHJCLDM_RS13270	COG0716	FMN binding
FFHJCLDM_RS13275	COG0564	pseudouridine synthase activity
FFHJCLDM_RS13280	COG3098	single-species biofilm formation
FFHJCLDM_RS13295	COG1611	Belongs to the LOG family
FFHJCLDM_RS13300	COG0814	amino acid
FFHJCLDM_RS13305	COG1760	l-serine dehydratase
FFHJCLDM_RS13315	COG1454	alcohol dehydrogenase
FFHJCLDM_RS13340	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FFHJCLDM_RS13345	COG1609	Transcriptional regulator
FFHJCLDM_RS13350	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS13355	COG1129	ABC transporter
FFHJCLDM_RS13365	COG1070	Carbohydrate kinase
FFHJCLDM_RS13375	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS13385	COG2363	Small membrane protein
FFHJCLDM_RS13390	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS13400	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FFHJCLDM_RS13405	COG2166	iron-sulfur cluster assembly
FFHJCLDM_RS13410	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FFHJCLDM_RS13415	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FFHJCLDM_RS13435	COG0860	N-Acetylmuramoyl-L-alanine amidase
FFHJCLDM_RS13440	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FFHJCLDM_RS13440	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FFHJCLDM_RS13445	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FFHJCLDM_RS13450	COG1074	ATP-dependent DNA helicase activity
FFHJCLDM_RS13460	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FFHJCLDM_RS13465	COG4967	type IV pilus modification protein PilV
FFHJCLDM_RS13475	COG4795	General secretion pathway protein
FFHJCLDM_RS13480	COG2165	general secretion pathway protein
FFHJCLDM_RS13495	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
FFHJCLDM_RS13510	COG0861	Integral membrane protein TerC family
FFHJCLDM_RS13520	COG0667	Aldo Keto reductase
FFHJCLDM_RS13535	COG1609	Transcriptional regulator
FFHJCLDM_RS13545	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS13550	COG1794	racemase activity, acting on amino acids and derivatives
FFHJCLDM_RS13555	COG2814	Major facilitator Superfamily
FFHJCLDM_RS13580	COG0183	Belongs to the thiolase family
FFHJCLDM_RS13585	COG0814	amino acid
FFHJCLDM_RS13590	COG2771	luxR family
FFHJCLDM_RS13610	COG4942	peptidase
FFHJCLDM_RS13615	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FFHJCLDM_RS13620	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FFHJCLDM_RS13625	COG2080	2 iron, 2 sulfur cluster binding
FFHJCLDM_RS13630	COG3829	transcription factor binding
FFHJCLDM_RS13635	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FFHJCLDM_RS13640	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FFHJCLDM_RS13645	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FFHJCLDM_RS13655	COG0549	Belongs to the carbamate kinase family
FFHJCLDM_RS13660	COG3608	succinylglutamate desuccinylase aspartoacylase
FFHJCLDM_RS13660	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FFHJCLDM_RS13665	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FFHJCLDM_RS13670	COG2068	MobA-Related Protein
FFHJCLDM_RS13675	COG0493	'glutamate synthase
FFHJCLDM_RS13675	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS13680	COG0402	S-adenosylhomocysteine deaminase activity
FFHJCLDM_RS13685	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FFHJCLDM_RS13690	COG2080	2 iron, 2 sulfur cluster binding
FFHJCLDM_RS13690	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FFHJCLDM_RS13695	COG2233	PERMEase
FFHJCLDM_RS13700	COG0402	S-adenosylhomocysteine deaminase activity
FFHJCLDM_RS13705	COG2252	PERMEase
FFHJCLDM_RS13710	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS13715	COG0493	'glutamate synthase
FFHJCLDM_RS13715	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS13720	COG2233	PERMEase
FFHJCLDM_RS13740	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FFHJCLDM_RS13750	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FFHJCLDM_RS13755	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FFHJCLDM_RS13760	COG4974	Belongs to the 'phage' integrase family
FFHJCLDM_RS13765	COG0716	FMN binding
FFHJCLDM_RS13775	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FFHJCLDM_RS13785	COG1272	protein, Hemolysin III
FFHJCLDM_RS13795	COG2723	6-phospho-beta-galactosidase activity
FFHJCLDM_RS13800	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS13825	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FFHJCLDM_RS13830	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FFHJCLDM_RS13835	COG0006	proline dipeptidase activity
FFHJCLDM_RS13855	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FFHJCLDM_RS13865	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FFHJCLDM_RS13885	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FFHJCLDM_RS13885	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FFHJCLDM_RS13890	COG1703	isobutyryl-CoA mutase activity
FFHJCLDM_RS13895	COG1024	Enoyl-CoA hydratase
FFHJCLDM_RS13900	COG0427	acetyl-CoA hydrolase
FFHJCLDM_RS13905	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS13910	COG2968	Membrane
FFHJCLDM_RS13915	COG1279	arginine transmembrane transporter activity
FFHJCLDM_RS13920	COG0668	transmembrane transport
FFHJCLDM_RS13925	COG0191	fructose-bisphosphate aldolase activity
FFHJCLDM_RS13940	COG1072	(Pantothenic acid kinase))
FFHJCLDM_RS13945	COG3722	fumarate hydratase activity
FFHJCLDM_RS13950	COG1494	fructose-1,6-bisphosphatase
FFHJCLDM_RS13955	COG1063	alcohol dehydrogenase
FFHJCLDM_RS13960	COG2213	PTS system mannitol-specific
FFHJCLDM_RS13965	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS13970	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FFHJCLDM_RS13975	COG0501	Belongs to the peptidase M48B family
FFHJCLDM_RS13985	COG1166	arginine decarboxylase activity
FFHJCLDM_RS14005	COG2814	Major facilitator Superfamily
FFHJCLDM_RS14015	COG2356	endonuclease I
FFHJCLDM_RS14020	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FFHJCLDM_RS14025	COG0189	ligase activity
FFHJCLDM_RS14040	COG2805	Type II/IV secretion system protein
FFHJCLDM_RS14045	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FFHJCLDM_RS14050	COG0762	integral membrane protein
FFHJCLDM_RS14060	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FFHJCLDM_RS14065	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FFHJCLDM_RS14075	COG0252	asparaginase activity
FFHJCLDM_RS14085	COG3171	Protein conserved in bacteria
FFHJCLDM_RS14095	COG1194	a g-specific adenine glycosylase
FFHJCLDM_RS14110	COG2211	Major facilitator Superfamily
FFHJCLDM_RS14115	COG1982	Orn Lys Arg decarboxylase major
FFHJCLDM_RS14120	COG1811	Na channel or pump
FFHJCLDM_RS14225	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FFHJCLDM_RS14255	COG2165	general secretion pathway protein
FFHJCLDM_RS14260	COG1459	type II secretion system
FFHJCLDM_RS14265	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FFHJCLDM_RS14285	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FFHJCLDM_RS14290	COG3064	Membrane
FFHJCLDM_RS14295	COG1620	l-lactate permease
FFHJCLDM_RS14300	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FFHJCLDM_RS14305	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FFHJCLDM_RS14310	COG0247	lactate metabolic process
FFHJCLDM_RS14315	COG0277	FAD linked oxidase domain protein
FFHJCLDM_RS14320	COG0277	FAD linked oxidase domain protein
FFHJCLDM_RS14325	COG2186	Transcriptional regulator
FFHJCLDM_RS14330	COG0456	acetyltransferase
FFHJCLDM_RS14335	COG0318	PFAM AMP-dependent synthetase and ligase
FFHJCLDM_RS14345	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FFHJCLDM_RS14350	COG0156	8-amino-7-oxononanoate synthase activity
FFHJCLDM_RS14360	COG0795	lipopolysaccharide-transporting ATPase activity
FFHJCLDM_RS14365	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FFHJCLDM_RS14375	COG2244	polysaccharide biosynthetic process
FFHJCLDM_RS14380	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FFHJCLDM_RS14385	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FFHJCLDM_RS14390	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FFHJCLDM_RS14395	COG0306	phosphate transporter
FFHJCLDM_RS14400	COG0754	glutathionylspermidine amidase activity
FFHJCLDM_RS14405	COG0625	glutathione transferase activity
FFHJCLDM_RS14410	COG0298	carbon dioxide binding
FFHJCLDM_RS14415	COG0375	protein maturation
FFHJCLDM_RS14420	COG1773	rubredoxin
FFHJCLDM_RS14425	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FFHJCLDM_RS14430	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FFHJCLDM_RS14435	COG5557	Pfam Polysulphide reductase, NrfD
FFHJCLDM_RS14440	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS14445	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FFHJCLDM_RS14460	COG0667	Aldo Keto reductase
FFHJCLDM_RS14470	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS14475	COG0848	biopolymer transport protein
FFHJCLDM_RS14480	COG0811	peptide transport
FFHJCLDM_RS14485	COG0626	cystathionine gamma-synthase activity
FFHJCLDM_RS14490	COG0586	Pfam SNARE associated Golgi protein
FFHJCLDM_RS14495	COG2207	Transcriptional regulator
FFHJCLDM_RS14500	COG1979	alcohol dehydrogenase
FFHJCLDM_RS14505	COG0656	L-ascorbic acid biosynthetic process
FFHJCLDM_RS14515	COG4238	major outer membrane lipoprotein
FFHJCLDM_RS14520	COG1032	radical SAM domain protein
FFHJCLDM_RS14525	COG2132	Multicopper oxidase
FFHJCLDM_RS14530	COG0204	Acyl-transferase
FFHJCLDM_RS14535	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FFHJCLDM_RS14540	COG4166	transmembrane transport
FFHJCLDM_RS14545	COG2944	sequence-specific DNA binding
FFHJCLDM_RS14555	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FFHJCLDM_RS14560	COG3111	PFAM Bacterial OB fold (BOF) protein
FFHJCLDM_RS14565	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS14570	COG0642	Histidine kinase
FFHJCLDM_RS14580	COG2249	NAD(P)H dehydrogenase (quinone) activity
FFHJCLDM_RS14585	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FFHJCLDM_RS14590	COG0187	DNA topoisomerase II activity
FFHJCLDM_RS14595	COG3150	esterase
FFHJCLDM_RS14600	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FFHJCLDM_RS14605	COG3151	Protein conserved in bacteria
FFHJCLDM_RS14610	COG0494	nUDIX hydrolase
FFHJCLDM_RS14615	COG1538	Outer membrane efflux protein
FFHJCLDM_RS14625	COG0754	glutathionylspermidine amidase activity
FFHJCLDM_RS14630	COG3384	dioxygenase
FFHJCLDM_RS14650	COG2960	long-chain fatty acid transporting porin activity
FFHJCLDM_RS14655	COG3539	Fimbrial protein
FFHJCLDM_RS14660	COG3188	usher protein
FFHJCLDM_RS14665	COG3121	Chaperone
FFHJCLDM_RS14670	COG3539	Fimbrial protein
FFHJCLDM_RS14680	COG1585	Membrane protein implicated in regulation of membrane protease activity
FFHJCLDM_RS14685	COG2268	Band 7 protein
FFHJCLDM_RS14710	COG3025	triphosphatase activity
FFHJCLDM_RS14715	COG4991	sh3 domain protein
FFHJCLDM_RS14730	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FFHJCLDM_RS14740	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS14745	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FFHJCLDM_RS14750	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FFHJCLDM_RS14755	COG0471	metal ion transport
FFHJCLDM_RS14765	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FFHJCLDM_RS14770	COG0358	DNA primase activity
FFHJCLDM_RS14775	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FFHJCLDM_RS14790	COG2375	cellular response to nickel ion
FFHJCLDM_RS14795	COG1695	Transcriptional regulator
FFHJCLDM_RS14800	COG0840	transmembrane signaling receptor activity
FFHJCLDM_RS14810	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FFHJCLDM_RS14815	COG1609	Transcriptional regulator
FFHJCLDM_RS14820	COG3250	beta-galactosidase activity
FFHJCLDM_RS14825	COG2731	YhcH YjgK YiaL family protein
FFHJCLDM_RS14830	COG0531	amino acid
FFHJCLDM_RS14840	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FFHJCLDM_RS14840	COG3408	Glycogen debranching enzyme
FFHJCLDM_RS14845	COG1902	pentaerythritol trinitrate reductase activity
FFHJCLDM_RS14845	COG0446	pyridine nucleotide-disulphide oxidoreductase
FFHJCLDM_RS14850	COG5499	transcription regulator containing HTH domain
FFHJCLDM_RS14855	COG4680	protein conserved in bacteria
FFHJCLDM_RS14865	COG1451	nucleotide metabolic process
FFHJCLDM_RS14870	COG2949	membrane
FFHJCLDM_RS14875	COG0673	inositol 2-dehydrogenase activity
FFHJCLDM_RS14880	COG0861	Integral membrane protein TerC family
FFHJCLDM_RS14885	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FFHJCLDM_RS14895	COG2721	sulfolactate sulfo-lyase activity
FFHJCLDM_RS14905	COG2271	Major facilitator Superfamily
FFHJCLDM_RS14910	COG2186	Transcriptional regulator
FFHJCLDM_RS14915	COG0586	Pfam SNARE associated Golgi protein
FFHJCLDM_RS14925	COG1422	Protein of unknown function (DUF1090)
FFHJCLDM_RS14930	COG4575	ribosome binding
FFHJCLDM_RS14935	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
FFHJCLDM_RS14945	COG2259	Doxx family
FFHJCLDM_RS14950	COG0435	Glutathione S-transferase
FFHJCLDM_RS14955	COG3152	Membrane
FFHJCLDM_RS14960	COG3152	Membrane
FFHJCLDM_RS14965	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS14970	COG1741	Belongs to the pirin family
FFHJCLDM_RS14985	COG0814	amino acid
FFHJCLDM_RS14990	COG1760	l-serine dehydratase
FFHJCLDM_RS14995	COG0251	oxidation-reduction process
FFHJCLDM_RS15000	COG1882	Formate acetyltransferase
FFHJCLDM_RS15005	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FFHJCLDM_RS15015	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FFHJCLDM_RS15020	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS15045	COG1929	Belongs to the glycerate kinase type-1 family
FFHJCLDM_RS15050	COG2084	Dehydrogenase
FFHJCLDM_RS15060	COG2271	Major facilitator Superfamily
FFHJCLDM_RS15065	COG2721	sulfolactate sulfo-lyase activity
FFHJCLDM_RS15070	COG2002	toxin-antitoxin pair type II binding
FFHJCLDM_RS15080	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS15090	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS15100	COG3716	PTS system mannose fructose sorbose family IID component
FFHJCLDM_RS15105	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS15110	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FFHJCLDM_RS15115	COG2222	sugar isomerase
FFHJCLDM_RS15125	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS15130	COG3715	PTS system
FFHJCLDM_RS15135	COG3716	PTS system mannose fructose sorbose family IID component
FFHJCLDM_RS15140	COG0363	glucosamine-6-phosphate deaminase activity
FFHJCLDM_RS15145	COG3539	Fimbrial protein
FFHJCLDM_RS15150	COG3121	Chaperone
FFHJCLDM_RS15155	COG3188	usher protein
FFHJCLDM_RS15160	COG3539	Fimbrial protein
FFHJCLDM_RS15165	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FFHJCLDM_RS15170	COG3107	peptidoglycan biosynthetic process
FFHJCLDM_RS15185	COG2823	Periplasmic or secreted lipoprotein
FFHJCLDM_RS15190	COG0701	Predicted permease
FFHJCLDM_RS15195	COG0702	epimerase
FFHJCLDM_RS15200	COG0693	protein deglycase activity
FFHJCLDM_RS15215	COG3153	acetyltransferase
FFHJCLDM_RS15220	COG3154	lipid carrier protein
FFHJCLDM_RS15225	COG0826	peptidase U32
FFHJCLDM_RS15230	COG0826	peptidase U32
FFHJCLDM_RS15235	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFHJCLDM_RS15240	COG0814	amino acid
FFHJCLDM_RS15245	COG0513	Belongs to the DEAD box helicase family
FFHJCLDM_RS15285	COG0195	Participates in both transcription termination and antitermination
FFHJCLDM_RS15305	COG2194	sulfuric ester hydrolase activity
FFHJCLDM_RS15315	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FFHJCLDM_RS15325	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FFHJCLDM_RS15330	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FFHJCLDM_RS15340	COG1534	Rna-binding protein
FFHJCLDM_RS15345	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FFHJCLDM_RS15350	COG2027	D-alanyl-D-alanine carboxypeptidase
FFHJCLDM_RS15360	COG0697	spore germination
FFHJCLDM_RS15375	COG0142	geranyltranstransferase activity
FFHJCLDM_RS15380	COG3423	Transcriptional regulator
FFHJCLDM_RS15390	COG5007	Belongs to the BolA IbaG family
FFHJCLDM_RS15395	COG3113	response to antibiotic
FFHJCLDM_RS15400	COG2854	intermembrane phospholipid transfer
FFHJCLDM_RS15405	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FFHJCLDM_RS15410	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FFHJCLDM_RS15415	COG1127	ABC transporter
FFHJCLDM_RS15420	COG0530	calcium, potassium:sodium antiporter activity
FFHJCLDM_RS15425	COG0517	IMP dehydrogenase activity
FFHJCLDM_RS15425	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FFHJCLDM_RS15430	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FFHJCLDM_RS15435	COG3117	lipopolysaccharide transmembrane transporter activity
FFHJCLDM_RS15440	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FFHJCLDM_RS15445	COG1137	ATPase activity
FFHJCLDM_RS15450	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FFHJCLDM_RS15455	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FFHJCLDM_RS15470	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS15475	COG0515	serine threonine protein kinase
FFHJCLDM_RS15485	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FFHJCLDM_RS15490	COG0784	Response regulator, receiver
FFHJCLDM_RS15490	COG2198	Histidine kinase
FFHJCLDM_RS15490	COG5002	protein histidine kinase activity
FFHJCLDM_RS15495	COG1242	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS15500	COG0070	glutamate synthase
FFHJCLDM_RS15500	COG0069	glutamate synthase activity
FFHJCLDM_RS15500	COG0067	glutamate synthase
FFHJCLDM_RS15505	COG0493	'glutamate synthase
FFHJCLDM_RS15510	COG4804	nuclease activity
FFHJCLDM_RS15520	COG2731	YhcH YjgK YiaL family protein
FFHJCLDM_RS15550	COG3069	C4-dicarboxylate transmembrane transporter activity
FFHJCLDM_RS15555	COG2969	positive regulation of protein catabolic process
FFHJCLDM_RS15560	COG0625	glutathione transferase activity
FFHJCLDM_RS15575	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FFHJCLDM_RS15580	COG3105	Protein conserved in bacteria
FFHJCLDM_RS15585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFHJCLDM_RS15590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFHJCLDM_RS15610	COG2732	(Barnase) inhibitor
FFHJCLDM_RS15630	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS15635	COG0312	modulator of DNA gyrase
FFHJCLDM_RS15640	COG3164	Protein of unknown function
FFHJCLDM_RS15645	COG1530	ribonuclease E activity
FFHJCLDM_RS15650	COG0424	maF-like protein
FFHJCLDM_RS15655	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FFHJCLDM_RS15660	COG1792	Involved in formation and maintenance of cell shape
FFHJCLDM_RS15665	COG1077	Cell shape determining protein MreB Mrl
FFHJCLDM_RS15670	COG2200	EAL domain
FFHJCLDM_RS15670	COG2199	diguanylate cyclase activity
FFHJCLDM_RS15675	COG0604	alcohol dehydrogenase
FFHJCLDM_RS15680	COG0511	ligase activity, forming carbon-carbon bonds
FFHJCLDM_RS15685	COG0439	Biotin carboxylase
FFHJCLDM_RS15690	COG3924	membrane
FFHJCLDM_RS15695	COG4145	pantothenate transmembrane transporter activity
FFHJCLDM_RS15705	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FFHJCLDM_RS15715	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FFHJCLDM_RS15725	COG1309	transcriptional regulator
FFHJCLDM_RS15730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFHJCLDM_RS15735	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFHJCLDM_RS15745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFHJCLDM_RS15750	COG4597	amino acid ABC transporter
FFHJCLDM_RS15755	COG0765	amino acid transport
FFHJCLDM_RS15760	COG1126	abc transporter atp-binding protein
FFHJCLDM_RS15800	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FFHJCLDM_RS15820	COG0551	DNA topoisomerase type I activity
FFHJCLDM_RS15830	COG0758	DNA mediated transformation
FFHJCLDM_RS15850	COG0569	domain protein
FFHJCLDM_RS15860	COG3036	rescue of stalled ribosome
FFHJCLDM_RS15865	COG0789	Transcriptional regulator
FFHJCLDM_RS15905	COG0201	protein transport
FFHJCLDM_RS15995	COG0089	rRNA binding
FFHJCLDM_RS16020	COG3267	Type II secretory pathway component ExeA
FFHJCLDM_RS16020	COG3409	Peptidoglycan-binding domain 1 protein
FFHJCLDM_RS16025	COG3031	protein transport across the cell outer membrane
FFHJCLDM_RS16030	COG1450	Type ii and iii secretion system protein
FFHJCLDM_RS16035	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FFHJCLDM_RS16040	COG1459	type II secretion system
FFHJCLDM_RS16045	COG2165	general secretion pathway protein
FFHJCLDM_RS16050	COG2165	general secretion pathway protein
FFHJCLDM_RS16055	COG2165	general secretion pathway protein
FFHJCLDM_RS16060	COG4795	General secretion pathway protein
FFHJCLDM_RS16065	COG3156	type II secretion system protein K
FFHJCLDM_RS16070	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FFHJCLDM_RS16075	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FFHJCLDM_RS16080	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FFHJCLDM_RS16085	COG2193	ferroxidase activity
FFHJCLDM_RS16090	COG2906	2 iron, 2 sulfur cluster binding
FFHJCLDM_RS16095	COG3979	chitinase
FFHJCLDM_RS16135	COG2964	Protein conserved in bacteria
FFHJCLDM_RS16140	COG0545	Peptidyl-prolyl cis-trans isomerase
FFHJCLDM_RS16150	COG1047	Peptidyl-prolyl cis-trans
FFHJCLDM_RS16155	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FFHJCLDM_RS16170	COG0488	(ABC) transporter
FFHJCLDM_RS16175	COG0429	hydrolase of the alpha beta-hydrolase fold
FFHJCLDM_RS16185	COG3954	Phosphoribulokinase
FFHJCLDM_RS16190	COG1765	OsmC-like protein
FFHJCLDM_RS16195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FFHJCLDM_RS16200	COG1289	transmembrane transporter activity
FFHJCLDM_RS16205	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FFHJCLDM_RS16210	COG0512	Glutamine amidotransferase of anthranilate synthase
FFHJCLDM_RS16215	COG2184	nucleotidyltransferase activity
FFHJCLDM_RS16225	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FFHJCLDM_RS16235	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FFHJCLDM_RS16240	COG2146	nitrite reductase [NAD(P)H] activity
FFHJCLDM_RS16245	COG2116	formate transmembrane transporter activity
FFHJCLDM_RS16260	COG0531	amino acid
FFHJCLDM_RS16265	COG2222	sugar isomerase
FFHJCLDM_RS16270	COG1082	Xylose isomerase domain protein TIM barrel
FFHJCLDM_RS16275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS16280	COG2188	Transcriptional regulator
FFHJCLDM_RS16285	COG0626	cystathionine gamma-synthase activity
FFHJCLDM_RS16310	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FFHJCLDM_RS16315	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FFHJCLDM_RS16320	COG3457	Alanine racemase
FFHJCLDM_RS16330	COG2188	Transcriptional regulator
FFHJCLDM_RS16335	COG0180	Tryptophanyl-tRNA synthetase
FFHJCLDM_RS16340	COG0546	phosphoglycolate phosphatase activity
FFHJCLDM_RS16345	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FFHJCLDM_RS16350	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FFHJCLDM_RS16355	COG3266	domain, Protein
FFHJCLDM_RS16370	COG4796	Type ii and iii secretion system protein
FFHJCLDM_RS16385	COG3166	PFAM Fimbrial assembly family protein
FFHJCLDM_RS16390	COG4972	Pilus assembly protein
FFHJCLDM_RS16395	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FFHJCLDM_RS16400	COG0494	nUDIX hydrolase
FFHJCLDM_RS16410	COG1011	Hydrolase
FFHJCLDM_RS16415	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FFHJCLDM_RS16425	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FFHJCLDM_RS16445	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FFHJCLDM_RS16450	COG2183	response to ionizing radiation
FFHJCLDM_RS16455	COG1918	ferrous iron import across plasma membrane
FFHJCLDM_RS16460	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FFHJCLDM_RS16470	COG5464	transposase or invertase
FFHJCLDM_RS16490	COG2610	gluconate transmembrane transporter activity
FFHJCLDM_RS16495	COG1640	4-alpha-glucanotransferase
FFHJCLDM_RS16500	COG0058	SHG alpha-glucan phosphorylase activity
FFHJCLDM_RS16515	COG1690	Belongs to the RtcB family
FFHJCLDM_RS16520	COG4650	regulator
FFHJCLDM_RS16525	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS16540	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FFHJCLDM_RS16555	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FFHJCLDM_RS16560	COG0058	SHG alpha-glucan phosphorylase activity
FFHJCLDM_RS16585	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FFHJCLDM_RS16590	COG2095	MarC family integral membrane protein
FFHJCLDM_RS16595	COG2610	gluconate transmembrane transporter activity
FFHJCLDM_RS16600	COG3265	gluconokinase activity
FFHJCLDM_RS16605	COG1609	Transcriptional regulator
FFHJCLDM_RS16610	COG1741	Belongs to the pirin family
FFHJCLDM_RS16615	COG0673	inositol 2-dehydrogenase activity
FFHJCLDM_RS16620	COG1247	-acetyltransferase
FFHJCLDM_RS16625	COG3157	Type VI secretion system effector, Hcp
FFHJCLDM_RS16645	COG0405	Gamma-glutamyltransferase
FFHJCLDM_RS16655	COG0584	glycerophosphoryl diester phosphodiesterase
FFHJCLDM_RS16660	COG3842	ATPase activity
FFHJCLDM_RS16665	COG0395	ABC-type sugar transport system, permease component
FFHJCLDM_RS16670	COG1175	transmembrane transport
FFHJCLDM_RS16675	COG1653	transport
FFHJCLDM_RS16680	COG0410	ABC transporter
FFHJCLDM_RS16685	COG0411	ABC transporter
FFHJCLDM_RS16690	COG4177	L-phenylalanine transmembrane transporter activity
FFHJCLDM_RS16695	COG0559	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS16700	COG0683	leucine binding
FFHJCLDM_RS16705	COG0456	acetyltransferase
FFHJCLDM_RS16710	COG0683	leucine binding
FFHJCLDM_RS16715	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FFHJCLDM_RS16720	COG2177	Part of the ABC transporter FtsEX involved in
FFHJCLDM_RS16725	COG2884	Cell division ATP-binding protein ftsE
FFHJCLDM_RS16730	COG0552	protein localization to endoplasmic reticulum
FFHJCLDM_RS16735	COG0742	ribosomal rna small subunit methyltransferase
FFHJCLDM_RS16740	COG3776	membrane
FFHJCLDM_RS16750	COG3714	YhhN family
FFHJCLDM_RS16765	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FFHJCLDM_RS16775	COG0477	Major facilitator Superfamily
FFHJCLDM_RS16780	COG0628	permease
FFHJCLDM_RS16785	COG2091	lysine biosynthetic process via aminoadipic acid
FFHJCLDM_RS16790	COG0747	negative chemotaxis
FFHJCLDM_RS16795	COG0601	transmembrane transport
FFHJCLDM_RS16800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFHJCLDM_RS16805	COG0444	Belongs to the ABC transporter superfamily
FFHJCLDM_RS16820	COG3209	COG3209 Rhs family protein
FFHJCLDM_RS16830	COG1413	lyase activity
FFHJCLDM_RS16835	COG5433	transposase activity
FFHJCLDM_RS16840	COG0842	Transport permease protein
FFHJCLDM_RS16845	COG1129	ABC transporter
FFHJCLDM_RS16845	COG0842	Transport permease protein
FFHJCLDM_RS16850	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFHJCLDM_RS16870	COG2081	HI0933 family
FFHJCLDM_RS16875	COG0306	phosphate transporter
FFHJCLDM_RS16885	COG0589	response to stress
FFHJCLDM_RS16890	COG3104	oligopeptide transport
FFHJCLDM_RS16900	COG0339	signal peptide processing
FFHJCLDM_RS16905	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FFHJCLDM_RS16910	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FFHJCLDM_RS16920	COG0640	Transcriptional regulator
FFHJCLDM_RS16925	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FFHJCLDM_RS16930	COG1393	Belongs to the ArsC family
FFHJCLDM_RS16940	COG3065	identical protein binding
FFHJCLDM_RS16945	COG2197	response regulator
FFHJCLDM_RS16950	COG1285	pathogenesis
FFHJCLDM_RS16965	COG3247	response to pH
FFHJCLDM_RS16970	COG2771	luxR family
FFHJCLDM_RS16980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFHJCLDM_RS16985	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFHJCLDM_RS16990	COG2207	Transcriptional regulator
FFHJCLDM_RS16995	COG2207	Transcriptional regulator
FFHJCLDM_RS17000	COG0076	glutamate decarboxylase activity
FFHJCLDM_RS17005	COG1858	cytochrome C peroxidase
FFHJCLDM_RS17015	COG2197	response regulator
FFHJCLDM_RS17020	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS17025	COG1295	ribonuclease BN
FFHJCLDM_RS17030	COG0477	Major facilitator Superfamily
FFHJCLDM_RS17035	COG2982	Protein involved in outer membrane biogenesis
FFHJCLDM_RS17040	COG2200	EAL domain
FFHJCLDM_RS17050	COG0612	Peptidase, M16
FFHJCLDM_RS17060	COG2199	diguanylate cyclase activity
FFHJCLDM_RS17060	COG2200	EAL domain
FFHJCLDM_RS17065	COG0457	Tetratricopeptide repeat
FFHJCLDM_RS17065	COG3118	belongs to the thioredoxin family
FFHJCLDM_RS17070	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FFHJCLDM_RS17075	COG1215	transferase activity, transferring glycosyl groups
FFHJCLDM_RS17080	COG1215	transferase activity, transferring glycosyl groups
FFHJCLDM_RS17105	COG2194	sulfuric ester hydrolase activity
FFHJCLDM_RS17125	COG0814	amino acid
FFHJCLDM_RS17130	COG4608	Belongs to the ABC transporter superfamily
FFHJCLDM_RS17135	COG0444	Belongs to the ABC transporter superfamily
FFHJCLDM_RS17140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFHJCLDM_RS17145	COG0601	transmembrane transport
FFHJCLDM_RS17150	COG0747	negative chemotaxis
FFHJCLDM_RS17165	COG2194	sulfuric ester hydrolase activity
FFHJCLDM_RS17170	COG2223	nitrite transmembrane transporter activity
FFHJCLDM_RS17175	COG5571	outer membrane autotransporter
FFHJCLDM_RS17180	COG2818	Glycosylase
FFHJCLDM_RS17185	COG0456	acetyltransferase
FFHJCLDM_RS17190	COG0243	molybdopterin cofactor binding
FFHJCLDM_RS17195	COG2885	chlorophyll binding
FFHJCLDM_RS17210	COG2944	sequence-specific DNA binding
FFHJCLDM_RS17215	COG1278	Cold shock
FFHJCLDM_RS17245	COG3274	enterobacterial common antigen metabolic process
FFHJCLDM_RS17250	COG4682	membrane
FFHJCLDM_RS17255	COG4682	membrane
FFHJCLDM_RS17260	COG1070	Carbohydrate kinase
FFHJCLDM_RS17270	COG4213	ABC transporter substrate-binding protein
FFHJCLDM_RS17280	COG4214	carbohydrate transport
FFHJCLDM_RS17285	COG2207	Transcriptional regulator
FFHJCLDM_RS17285	COG1609	Transcriptional regulator
FFHJCLDM_RS17290	COG2992	FlgJ-related protein
FFHJCLDM_RS17295	COG0366	Alpha amylase catalytic
FFHJCLDM_RS17300	COG3977	Valine--pyruvate aminotransferase
FFHJCLDM_RS17305	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFHJCLDM_RS17310	COG1414	Transcriptional regulator
FFHJCLDM_RS17320	COG2731	YhcH YjgK YiaL family protein
FFHJCLDM_RS17325	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FFHJCLDM_RS17330	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FFHJCLDM_RS17335	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FFHJCLDM_RS17340	COG1070	Carbohydrate kinase
FFHJCLDM_RS17345	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FFHJCLDM_RS17350	COG3623	hexulose-6-phosphate isomerase
FFHJCLDM_RS17355	COG0235	Class ii aldolase
FFHJCLDM_RS17365	COG2211	Major facilitator Superfamily
FFHJCLDM_RS17375	COG3713	MltA-interacting MipA family protein
FFHJCLDM_RS17380	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS17385	COG1566	PFAM secretion protein HlyD family protein
FFHJCLDM_RS17400	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS17405	COG1454	alcohol dehydrogenase
FFHJCLDM_RS17410	COG3276	selenocysteine insertion sequence binding
FFHJCLDM_RS17420	COG0625	glutathione transferase activity
FFHJCLDM_RS17430	COG3209	COG3209 Rhs family protein
FFHJCLDM_RS17435	COG1413	lyase activity
FFHJCLDM_RS17445	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FFHJCLDM_RS17455	COG1566	PFAM secretion protein HlyD family protein
FFHJCLDM_RS17465	COG2213	PTS system mannitol-specific
FFHJCLDM_RS17465	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS17475	COG3722	fumarate hydratase activity
FFHJCLDM_RS17495	COG5295	Hep Hag repeat protein
FFHJCLDM_RS17500	COG1620	l-lactate permease
FFHJCLDM_RS17505	COG2186	Transcriptional regulator
FFHJCLDM_RS17515	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FFHJCLDM_RS17520	COG1045	serine acetyltransferase
FFHJCLDM_RS17535	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FFHJCLDM_RS17540	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FFHJCLDM_RS17550	COG4942	peptidase
FFHJCLDM_RS17555	COG2861	carbohydrate metabolic process
FFHJCLDM_RS17560	COG1216	Glycosyl transferase, family 2
FFHJCLDM_RS17570	COG0156	8-amino-7-oxononanoate synthase activity
FFHJCLDM_RS17580	COG0859	PFAM glycosyl transferase family 9
FFHJCLDM_RS17585	COG0859	PFAM glycosyl transferase family 9
FFHJCLDM_RS17590	COG3307	-O-antigen
FFHJCLDM_RS17595	COG1216	Glycosyl transferase, family 2
FFHJCLDM_RS17600	COG1442	glycosyl transferase family 8
FFHJCLDM_RS17605	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FFHJCLDM_RS17630	COG0515	serine threonine protein kinase
FFHJCLDM_RS17635	COG0438	transferase activity, transferring glycosyl groups
FFHJCLDM_RS17640	COG0859	PFAM glycosyl transferase family 9
FFHJCLDM_RS17645	COG1519	Transferase
FFHJCLDM_RS17675	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FFHJCLDM_RS17700	COG1561	YicC-like family, N-terminal region
FFHJCLDM_RS17705	COG3645	SOS response
FFHJCLDM_RS17710	COG2860	membrane
FFHJCLDM_RS17720	COG0194	GDP metabolic process
FFHJCLDM_RS17730	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FFHJCLDM_RS17735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FFHJCLDM_RS17740	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FFHJCLDM_RS17750	COG0786	glutamate:sodium symporter activity
FFHJCLDM_RS17755	COG2233	PERMEase
FFHJCLDM_RS17760	COG2982	Protein involved in outer membrane biogenesis
FFHJCLDM_RS17765	COG1501	Belongs to the glycosyl hydrolase 31 family
FFHJCLDM_RS17770	COG2211	Major facilitator Superfamily
FFHJCLDM_RS17780	COG0582	viral genome integration into host DNA
FFHJCLDM_RS17790	COG1609	Transcriptional regulator
FFHJCLDM_RS17795	COG2271	Major facilitator Superfamily
FFHJCLDM_RS17880	COG2814	Major facilitator Superfamily
FFHJCLDM_RS17885	COG0697	spore germination
FFHJCLDM_RS17890	COG1464	Belongs to the NlpA lipoprotein family
FFHJCLDM_RS17910	COG2252	PERMEase
FFHJCLDM_RS17920	COG2271	Major facilitator Superfamily
FFHJCLDM_RS17925	COG2271	Major facilitator Superfamily
FFHJCLDM_RS17930	COG3851	Histidine kinase
FFHJCLDM_RS17935	COG2197	response regulator
FFHJCLDM_RS17940	COG0440	acetolactate synthase activity
FFHJCLDM_RS17945	COG0028	Belongs to the TPP enzyme family
FFHJCLDM_RS17960	COG2814	Major facilitator Superfamily
FFHJCLDM_RS17965	COG0641	radical SAM
FFHJCLDM_RS17975	COG2149	membrane
FFHJCLDM_RS17985	COG3119	arylsulfatase activity
FFHJCLDM_RS17990	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FFHJCLDM_RS17995	COG2207	Transcriptional regulator
FFHJCLDM_RS18030	COG5645	(Lipo)protein
FFHJCLDM_RS18035	COG0823	Involved in the tonB-independent uptake of proteins
FFHJCLDM_RS18045	COG2271	Major facilitator Superfamily
FFHJCLDM_RS18055	COG0800	Aldolase
FFHJCLDM_RS18060	COG3734	2-keto-3-deoxy-galactonokinase
FFHJCLDM_RS18065	COG2186	Transcriptional regulator
FFHJCLDM_RS18075	COG0561	phosphatase activity
FFHJCLDM_RS18080	COG3753	Protein conserved in bacteria
FFHJCLDM_RS18085	COG0187	DNA topoisomerase II activity
FFHJCLDM_RS18095	COG0592	DNA-directed DNA polymerase activity
FFHJCLDM_RS18145	COG0814	amino acid
FFHJCLDM_RS18160	COG2091	lysine biosynthetic process via aminoadipic acid
FFHJCLDM_RS18165	COG0431	NADPH-dependent FMN reductase
FFHJCLDM_RS18170	COG2252	PERMEase
FFHJCLDM_RS18175	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFHJCLDM_RS18185	COG3196	Protein conserved in bacteria
FFHJCLDM_RS18190	COG0363	glucosamine-6-phosphate deaminase activity
FFHJCLDM_RS18195	COG2382	esterase
FFHJCLDM_RS18205	COG2723	6-phospho-beta-galactosidase activity
FFHJCLDM_RS18210	COG2190	(PTS) system
FFHJCLDM_RS18210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS18210	COG1263	PTS System
FFHJCLDM_RS18215	COG3711	transcriptional antiterminator
FFHJCLDM_RS18220	COG0704	Plays a role in the regulation of phosphate uptake
FFHJCLDM_RS18225	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FFHJCLDM_RS18230	COG0581	inorganic phosphate transmembrane transporter activity
FFHJCLDM_RS18235	COG0573	inorganic phosphate transmembrane transporter activity
FFHJCLDM_RS18240	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FFHJCLDM_RS18245	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FFHJCLDM_RS18295	COG3312	ion transport
FFHJCLDM_RS18310	COG0716	FMN binding
FFHJCLDM_RS18315	COG1522	sequence-specific DNA binding
FFHJCLDM_RS18355	COG1129	ABC transporter
FFHJCLDM_RS18360	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS18365	COG1879	ABC-type sugar transport system periplasmic component
FFHJCLDM_RS18370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS18375	COG1609	Transcriptional regulator
FFHJCLDM_RS18380	COG0477	Major facilitator Superfamily
FFHJCLDM_RS18385	COG2186	Transcriptional regulator
FFHJCLDM_RS18425	COG3085	chromosome segregation
FFHJCLDM_RS18430	COG0606	chelatase, subunit chli
FFHJCLDM_RS18450	COG3978	acetolactate synthase activity
FFHJCLDM_RS18455	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FFHJCLDM_RS18465	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FFHJCLDM_RS18470	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS18480	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FFHJCLDM_RS18490	COG0210	DNA helicase
FFHJCLDM_RS18505	COG3118	belongs to the thioredoxin family
FFHJCLDM_RS18515	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FFHJCLDM_RS18520	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FFHJCLDM_RS18525	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FFHJCLDM_RS18530	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FFHJCLDM_RS18535	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FFHJCLDM_RS18540	COG1088	dTDP-glucose 4,6-dehydratase activity
FFHJCLDM_RS18545	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FFHJCLDM_RS18550	COG0456	acetyltransferase
FFHJCLDM_RS18555	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FFHJCLDM_RS18560	COG2244	polysaccharide biosynthetic process
FFHJCLDM_RS18580	COG1113	amino acid transport
FFHJCLDM_RS18605	COG0641	radical SAM
FFHJCLDM_RS18610	COG3119	arylsulfatase activity
FFHJCLDM_RS18615	COG3071	HemY protein
FFHJCLDM_RS18620	COG2959	enzyme of heme biosynthesis
FFHJCLDM_RS18625	COG1587	Uroporphyrinogen-III synthase
FFHJCLDM_RS18635	COG3072	Adenylate cyclase
FFHJCLDM_RS18650	COG5567	small periplasmic lipoprotein
FFHJCLDM_RS18660	COG3159	Protein conserved in bacteria
FFHJCLDM_RS18670	COG1011	Hydrolase
FFHJCLDM_RS18675	COG0210	DNA helicase
FFHJCLDM_RS18680	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
FFHJCLDM_RS18685	COG3698	Phosphodiester glycosidase
FFHJCLDM_RS18690	COG0598	Magnesium transport protein CorA
FFHJCLDM_RS18720	COG2962	Rard protein
FFHJCLDM_RS18725	COG2050	protein possibly involved in aromatic compounds catabolism
FFHJCLDM_RS18730	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
FFHJCLDM_RS18735	COG0514	ATP-dependent DNA helicase (RecQ)
FFHJCLDM_RS18740	COG1280	lysine exporter protein (LysE YggA)
FFHJCLDM_RS18745	COG1280	lysine exporter protein (LysE YggA)
FFHJCLDM_RS18750	COG2267	carboxylic ester hydrolase activity
FFHJCLDM_RS18755	COG0561	phosphatase activity
FFHJCLDM_RS18760	COG0697	spore germination
FFHJCLDM_RS18765	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS18770	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FFHJCLDM_RS18775	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS18780	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FFHJCLDM_RS18790	COG0549	Belongs to the carbamate kinase family
FFHJCLDM_RS18795	COG1304	FMN binding
FFHJCLDM_RS18800	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FFHJCLDM_RS18810	COG1335	isochorismatase
FFHJCLDM_RS18815	COG0412	Dienelactone hydrolase
FFHJCLDM_RS18820	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FFHJCLDM_RS18840	COG0800	Aldolase
FFHJCLDM_RS18845	COG3734	2-keto-3-deoxy-galactonokinase
FFHJCLDM_RS18850	COG1414	Transcriptional regulator
FFHJCLDM_RS18855	COG1322	Protein conserved in bacteria
FFHJCLDM_RS18865	COG3165	ubiquinone biosynthetic process from chorismate
FFHJCLDM_RS18875	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FFHJCLDM_RS18880	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FFHJCLDM_RS18885	COG0805	protein transport
FFHJCLDM_RS18890	COG0084	hydrolase, TatD family'
FFHJCLDM_RS18895	COG0250	Participates in transcription elongation, termination and antitermination
FFHJCLDM_RS18900	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FFHJCLDM_RS18905	COG0543	2 iron, 2 sulfur cluster binding
FFHJCLDM_RS18925	COG1739	Uncharacterized protein family UPF0029
FFHJCLDM_RS18930	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FFHJCLDM_RS18935	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FFHJCLDM_RS18965	COG1763	Mo-molybdopterin cofactor biosynthetic process
FFHJCLDM_RS18970	COG0746	molybdenum cofactor guanylyltransferase activity
FFHJCLDM_RS18975	COG3084	Protein conserved in bacteria
FFHJCLDM_RS18980	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FFHJCLDM_RS18985	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FFHJCLDM_RS18990	COG5339	Protein conserved in bacteria
FFHJCLDM_RS18995	COG0204	Acyl-transferase
FFHJCLDM_RS19000	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FFHJCLDM_RS19000	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FFHJCLDM_RS19015	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FFHJCLDM_RS19025	COG2204	response regulator
FFHJCLDM_RS19030	COG3852	Histidine kinase
FFHJCLDM_RS19035	COG0174	glutamine synthetase
FFHJCLDM_RS19040	COG1217	gtp-binding protein TYPA
FFHJCLDM_RS19045	COG2188	Transcriptional regulator
FFHJCLDM_RS19050	COG1082	Xylose isomerase domain protein TIM barrel
FFHJCLDM_RS19055	COG2271	Major facilitator Superfamily
FFHJCLDM_RS19060	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FFHJCLDM_RS19065	COG2211	Major facilitator Superfamily
FFHJCLDM_RS19070	COG2211	Major facilitator Superfamily
FFHJCLDM_RS19080	COG2017	converts alpha-aldose to the beta-anomer
FFHJCLDM_RS19085	COG2942	2-epimerase
FFHJCLDM_RS19090	COG3684	Belongs to the aldolase LacD family
FFHJCLDM_RS19095	COG2084	Dehydrogenase
FFHJCLDM_RS19100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFHJCLDM_RS19105	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS19110	COG1011	Hydrolase
FFHJCLDM_RS19125	COG0456	acetyltransferase
FFHJCLDM_RS19130	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FFHJCLDM_RS19135	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FFHJCLDM_RS19145	COG2864	formate dehydrogenase
FFHJCLDM_RS19150	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS19170	COG3711	transcriptional antiterminator
FFHJCLDM_RS19170	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS19175	COG1363	Peptidase, m42
FFHJCLDM_RS19180	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS19180	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS19185	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS19230	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FFHJCLDM_RS19240	COG2258	MOSC domain
FFHJCLDM_RS19245	COG2205	protein histidine kinase activity
FFHJCLDM_RS19250	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS19255	COG3678	ATP-independent chaperone mediated protein folding
FFHJCLDM_RS19270	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FFHJCLDM_RS19290	COG3152	Membrane
FFHJCLDM_RS19295	COG3691	Protein conserved in bacteria
FFHJCLDM_RS19300	COG0589	response to stress
FFHJCLDM_RS19310	COG1494	fructose-1,6-bisphosphatase
FFHJCLDM_RS19320	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FFHJCLDM_RS19335	COG1575	Belongs to the MenA family. Type 1 subfamily
FFHJCLDM_RS19350	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FFHJCLDM_RS19355	COG1609	Transcriptional regulator
FFHJCLDM_RS19360	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FFHJCLDM_RS19375	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FFHJCLDM_RS19385	COG0626	cystathionine gamma-synthase activity
FFHJCLDM_RS19390	COG0460	homoserine dehydrogenase
FFHJCLDM_RS19390	COG0527	aspartate kinase activity
FFHJCLDM_RS19395	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FFHJCLDM_RS19405	COG0697	spore germination
FFHJCLDM_RS19410	COG3738	Protein conserved in bacteria
FFHJCLDM_RS19415	COG0371	Dehydrogenase
FFHJCLDM_RS19420	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FFHJCLDM_RS19425	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS19425	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS19425	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FFHJCLDM_RS19430	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS19435	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS19440	COG1882	Formate acetyltransferase
FFHJCLDM_RS19445	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FFHJCLDM_RS19450	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FFHJCLDM_RS19455	COG2207	Transcriptional regulator
FFHJCLDM_RS19460	COG2194	sulfuric ester hydrolase activity
FFHJCLDM_RS19475	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FFHJCLDM_RS19490	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS19500	COG1309	transcriptional regulator
FFHJCLDM_RS19550	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FFHJCLDM_RS19550	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FFHJCLDM_RS19585	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FFHJCLDM_RS19590	COG0250	Participates in transcription elongation, termination and antitermination
FFHJCLDM_RS19630	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FFHJCLDM_RS19640	COG2104	thiamine diphosphate biosynthetic process
FFHJCLDM_RS19645	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FFHJCLDM_RS19680	COG3068	Protein conserved in bacteria
FFHJCLDM_RS19695	COG3678	ATP-independent chaperone mediated protein folding
FFHJCLDM_RS19700	COG4191	Histidine kinase
FFHJCLDM_RS19705	COG2204	response regulator
FFHJCLDM_RS19710	COG0151	Belongs to the GarS family
FFHJCLDM_RS19740	COG0456	acetyltransferase
FFHJCLDM_RS19750	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FFHJCLDM_RS19755	COG2224	Isocitrate lyase
FFHJCLDM_RS19770	COG1414	Transcriptional regulator
FFHJCLDM_RS19775	COG0646	methionine synthase
FFHJCLDM_RS19775	COG1410	methionine synthase
FFHJCLDM_RS19780	COG1283	sodium-dependent phosphate transmembrane transporter activity
FFHJCLDM_RS19790	COG1187	pseudouridine synthase activity
FFHJCLDM_RS19800	COG0527	aspartate kinase activity
FFHJCLDM_RS19825	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFHJCLDM_RS19845	COG2814	Major facilitator Superfamily
FFHJCLDM_RS19845	COG0477	Major facilitator Superfamily
FFHJCLDM_RS19850	COG3833	ABC-type maltose transport systems, permease component
FFHJCLDM_RS19855	COG1175	transmembrane transport
FFHJCLDM_RS19860	COG2182	Extracellular solute-binding protein
FFHJCLDM_RS19865	COG3842	ATPase activity
FFHJCLDM_RS19900	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FFHJCLDM_RS19910	COG0534	Mate efflux family protein
FFHJCLDM_RS19915	COG3237	CsbD-like
FFHJCLDM_RS19920	COG0735	belongs to the Fur family
FFHJCLDM_RS19930	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FFHJCLDM_RS19940	COG0604	alcohol dehydrogenase
FFHJCLDM_RS19945	COG0305	Participates in initiation and elongation during chromosome replication
FFHJCLDM_RS19950	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FFHJCLDM_RS19955	COG1448	Aminotransferase
FFHJCLDM_RS19965	COG3700	Belongs to the class B bacterial acid phosphatase family
FFHJCLDM_RS19970	COG0432	Pfam Uncharacterised protein family UPF0047
FFHJCLDM_RS19975	COG2315	Protein conserved in bacteria
FFHJCLDM_RS19980	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FFHJCLDM_RS19985	COG0629	single-stranded DNA binding
FFHJCLDM_RS19995	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FFHJCLDM_RS20000	COG2207	Transcriptional regulator
FFHJCLDM_RS20005	COG0789	Transcriptional regulator
FFHJCLDM_RS20010	COG2252	PERMEase
FFHJCLDM_RS20015	COG0025	NhaP-type Na H and K H
FFHJCLDM_RS20030	COG3162	membrane
FFHJCLDM_RS20035	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FFHJCLDM_RS20045	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FFHJCLDM_RS20050	COG0437	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS20055	COG3301	Polysulphide reductase, NrfD
FFHJCLDM_RS20060	COG1138	Cytochrome C-type biogenesis protein
FFHJCLDM_RS20065	COG3088	subunit of a heme lyase
FFHJCLDM_RS20070	COG4235	cytochrome complex assembly
FFHJCLDM_RS20075	COG1301	dicarboxylic acid transport
FFHJCLDM_RS20080	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FFHJCLDM_RS20090	COG1538	Outer membrane efflux protein
FFHJCLDM_RS20095	COG1289	transmembrane transporter activity
FFHJCLDM_RS20100	COG1566	PFAM secretion protein HlyD family protein
FFHJCLDM_RS20110	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FFHJCLDM_RS20115	COG1940	carbohydrate kinase activity
FFHJCLDM_RS20120	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FFHJCLDM_RS20125	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS20130	COG1129	ABC transporter
FFHJCLDM_RS20135	COG1879	ABC-type sugar transport system periplasmic component
FFHJCLDM_RS20140	COG1737	Transcriptional regulator
FFHJCLDM_RS20145	COG0698	ribose 5-phosphate isomerase
FFHJCLDM_RS20155	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FFHJCLDM_RS20160	COG0456	acetyltransferase
FFHJCLDM_RS20165	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FFHJCLDM_RS20170	COG3454	Phosphonate metabolism
FFHJCLDM_RS20175	COG4778	phosphonate C-P lyase system protein PhnL
FFHJCLDM_RS20180	COG4107	phosphonate C-P lyase system protein PhnK
FFHJCLDM_RS20185	COG3627	carbon phosphorus lyase activity
FFHJCLDM_RS20190	COG3626	phosphonate metabolism
FFHJCLDM_RS20195	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FFHJCLDM_RS20200	COG3624	Phosphonate C-P lyase system protein PhnG
FFHJCLDM_RS20205	COG2188	Transcriptional regulator
FFHJCLDM_RS20210	COG3639	organic phosphonate transmembrane transporter activity
FFHJCLDM_RS20215	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FFHJCLDM_RS20225	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FFHJCLDM_RS20230	COG2824	Alkylphosphonate utilization operon protein PhnA
FFHJCLDM_RS20245	COG0477	Major facilitator Superfamily
FFHJCLDM_RS20255	COG0642	Histidine kinase
FFHJCLDM_RS20260	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS20265	COG2194	sulfuric ester hydrolase activity
FFHJCLDM_RS20270	COG0531	amino acid
FFHJCLDM_RS20275	COG2207	Transcriptional regulator
FFHJCLDM_RS20280	COG1982	Orn Lys Arg decarboxylase major
FFHJCLDM_RS20285	COG2169	Transcriptional regulator
FFHJCLDM_RS20290	COG1486	melibiose metabolic process
FFHJCLDM_RS20295	COG2211	Major facilitator Superfamily
FFHJCLDM_RS20300	COG3647	Membrane
FFHJCLDM_RS20305	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FFHJCLDM_RS20305	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FFHJCLDM_RS20310	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FFHJCLDM_RS20315	COG4565	transcriptional regulatory protein
FFHJCLDM_RS20325	COG3592	Divergent 4Fe-4S mono-cluster
FFHJCLDM_RS20330	COG2388	GCN5-related N-acetyl-transferase
FFHJCLDM_RS20345	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FFHJCLDM_RS20350	COG3104	oligopeptide transport
FFHJCLDM_RS20355	COG1982	Orn Lys Arg decarboxylase major
FFHJCLDM_RS20360	COG0531	amino acid
FFHJCLDM_RS20365	COG3710	Transcriptional regulator
FFHJCLDM_RS20375	COG1309	transcriptional regulator
FFHJCLDM_RS20390	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FFHJCLDM_RS20395	COG1027	Aspartate ammonia-lyase
FFHJCLDM_RS20400	COG3030	protein affecting phage T7 exclusion by the F plasmid
FFHJCLDM_RS20405	COG0531	amino acid
FFHJCLDM_RS20430	COG1509	lysine 2,3-aminomutase activity
FFHJCLDM_RS20440	COG5510	response to toxic substance
FFHJCLDM_RS20445	COG5510	response to toxic substance
FFHJCLDM_RS20450	COG2076	Multidrug Resistance protein
FFHJCLDM_RS20455	COG3040	lipid binding
FFHJCLDM_RS20460	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FFHJCLDM_RS20475	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FFHJCLDM_RS20480	COG1053	succinate dehydrogenase
FFHJCLDM_RS20490	COG0531	amino acid
FFHJCLDM_RS20495	COG3264	Mechanosensitive ion channel
FFHJCLDM_RS20495	COG1511	domain protein
FFHJCLDM_RS20535	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FFHJCLDM_RS20540	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FFHJCLDM_RS20540	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FFHJCLDM_RS20545	COG0802	atpase or kinase
FFHJCLDM_RS20550	COG0860	N-Acetylmuramoyl-L-alanine amidase
FFHJCLDM_RS20570	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FFHJCLDM_RS20575	COG0330	HflC and HflK could
FFHJCLDM_RS20580	COG0330	HflC and HflK could
FFHJCLDM_RS20585	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FFHJCLDM_RS20600	COG0557	exoribonuclease II activity
FFHJCLDM_RS20605	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FFHJCLDM_RS20610	COG3789	protein conserved in bacteria
FFHJCLDM_RS20615	COG1842	Phage shock protein A
FFHJCLDM_RS20625	COG3766	membrane
FFHJCLDM_RS20630	COG5463	Belongs to the UPF0441 family
FFHJCLDM_RS20635	COG0754	glutathionylspermidine amidase activity
FFHJCLDM_RS20640	COG1960	acyl-CoA dehydrogenase activity
FFHJCLDM_RS20650	COG3650	response to hydrogen peroxide
FFHJCLDM_RS20655	COG1073	alpha beta
FFHJCLDM_RS20670	COG3037	sugar-specific permease SgaT UlaA
FFHJCLDM_RS20675	COG3414	Phosphotransferase system galactitol-specific IIB component
FFHJCLDM_RS20715	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FFHJCLDM_RS20725	COG2271	Major facilitator Superfamily
FFHJCLDM_RS20730	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FFHJCLDM_RS20735	COG4670	ketone body catabolic process
FFHJCLDM_RS20740	COG1024	Enoyl-CoA hydratase
FFHJCLDM_RS20750	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS20755	COG1309	transcriptional regulator
FFHJCLDM_RS20760	COG3061	Opacity-associated protein A
FFHJCLDM_RS20765	COG0545	Peptidyl-prolyl cis-trans isomerase
FFHJCLDM_RS20770	COG1113	amino acid transport
FFHJCLDM_RS20780	COG0697	spore germination
FFHJCLDM_RS20785	COG0702	epimerase
FFHJCLDM_RS20790	COG1733	regulation of RNA biosynthetic process
FFHJCLDM_RS20795	COG0737	Belongs to the 5'-nucleotidase family
FFHJCLDM_RS20800	COG1218	3'(2'),5'-bisphosphate nucleotidase
FFHJCLDM_RS20805	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FFHJCLDM_RS20815	COG1253	flavin adenine dinucleotide binding
FFHJCLDM_RS20825	COG0729	surface antigen
FFHJCLDM_RS20830	COG2911	Protein conserved in bacteria
FFHJCLDM_RS20835	COG2105	PFAM AIG2 family protein
FFHJCLDM_RS20840	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FFHJCLDM_RS20845	COG1879	ABC-type sugar transport system periplasmic component
FFHJCLDM_RS20850	COG1129	ABC transporter
FFHJCLDM_RS20855	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS20860	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFHJCLDM_RS20870	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FFHJCLDM_RS20880	COG0312	modulator of DNA gyrase
FFHJCLDM_RS20885	COG3783	Cytochrome b(562)
FFHJCLDM_RS20890	COG0602	queuosine metabolic process
FFHJCLDM_RS20895	COG1328	CTP reductase activity
FFHJCLDM_RS20900	COG0366	Alpha amylase catalytic
FFHJCLDM_RS20905	COG1263	PTS System
FFHJCLDM_RS20905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FFHJCLDM_RS20910	COG1609	Transcriptional regulator
FFHJCLDM_RS20920	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FFHJCLDM_RS20925	COG0251	oxidation-reduction process
FFHJCLDM_RS20945	COG0251	oxidation-reduction process
FFHJCLDM_RS20950	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS20955	COG1309	transcriptional regulator
FFHJCLDM_RS20960	COG2731	YhcH YjgK YiaL family protein
FFHJCLDM_RS20975	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
FFHJCLDM_RS20980	COG0456	acetyltransferase
FFHJCLDM_RS20985	COG4269	membrane
FFHJCLDM_RS20995	COG2927	DNA polymerase III (CHI subunit)
FFHJCLDM_RS21005	COG0795	lipopolysaccharide-transporting ATPase activity
FFHJCLDM_RS21010	COG0795	lipopolysaccharide-transporting ATPase activity
FFHJCLDM_RS21015	COG0433	COG0433 Predicted ATPase
FFHJCLDM_RS21020	COG1609	Transcriptional regulator
FFHJCLDM_RS21025	COG2610	gluconate transmembrane transporter activity
FFHJCLDM_RS21030	COG1028	Short-chain dehydrogenase reductase Sdr
FFHJCLDM_RS21035	COG1063	alcohol dehydrogenase
FFHJCLDM_RS21040	COG3265	gluconokinase activity
FFHJCLDM_RS21045	COG1064	alcohol dehydrogenase
FFHJCLDM_RS21075	COG3385	transposase activity
FFHJCLDM_RS21080	COG2814	Major facilitator Superfamily
FFHJCLDM_RS21085	COG0673	inositol 2-dehydrogenase activity
FFHJCLDM_RS21115	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FFHJCLDM_RS21130	COG2085	NADP oxidoreductase coenzyme F420-dependent
FFHJCLDM_RS21135	COG1120	ATPase activity
FFHJCLDM_RS21140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FFHJCLDM_RS21145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FFHJCLDM_RS21150	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FFHJCLDM_RS21155	COG4772	TonB-dependent receptor
FFHJCLDM_RS21160	COG3712	iron ion homeostasis
FFHJCLDM_RS21165	COG1595	DNA-templated transcription, initiation
FFHJCLDM_RS21195	COG1349	DNA-binding transcription factor activity
FFHJCLDM_RS21200	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FFHJCLDM_RS21205	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFHJCLDM_RS21210	COG0434	BtpA family
FFHJCLDM_RS21215	COG3775	system Galactitol-specific IIC component
FFHJCLDM_RS21220	COG3414	Phosphotransferase system galactitol-specific IIB component
FFHJCLDM_RS21225	COG1363	Peptidase, m42
FFHJCLDM_RS21235	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FFHJCLDM_RS21240	COG3153	acetyltransferase
FFHJCLDM_RS21265	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
FFHJCLDM_RS21270	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FFHJCLDM_RS21290	COG4974	Belongs to the 'phage' integrase family
FFHJCLDM_RS21295	COG3539	Fimbrial protein
FFHJCLDM_RS21300	COG3539	Fimbrial protein
FFHJCLDM_RS21305	COG3121	Chaperone
FFHJCLDM_RS21310	COG3188	usher protein
FFHJCLDM_RS21315	COG3539	Fimbrial protein
FFHJCLDM_RS21320	COG3539	Fimbrial protein
FFHJCLDM_RS21325	COG3539	Fimbrial protein
FFHJCLDM_RS21330	COG2610	gluconate transmembrane transporter activity
FFHJCLDM_RS21340	COG0246	Mannitol dehydrogenase
FFHJCLDM_RS21345	COG2186	Transcriptional regulator
FFHJCLDM_RS21365	COG0583	DNA-binding transcription factor activity
FFHJCLDM_RS21370	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FFHJCLDM_RS21375	COG0700	Nucleoside recognition
FFHJCLDM_RS21380	COG3366	ferrous iron transmembrane transporter activity
FFHJCLDM_RS21390	COG0477	Major facilitator Superfamily
FFHJCLDM_RS21395	COG3204	pilus organization
FFHJCLDM_RS21405	COG1924	4 iron, 4 sulfur cluster binding
FFHJCLDM_RS21410	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
FFHJCLDM_RS21415	COG2733	membrane
FFHJCLDM_RS21420	COG2814	Major facilitator Superfamily
FFHJCLDM_RS21440	COG4268	DNA restriction-modification system
FFHJCLDM_RS21445	COG1401	restriction endodeoxyribonuclease activity
FFHJCLDM_RS21470	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FFHJCLDM_RS21475	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
FFHJCLDM_RS21480	COG1715	Restriction endonuclease
FFHJCLDM_RS21485	COG0523	cobalamin synthesis protein
FFHJCLDM_RS21490	COG2879	small protein
FFHJCLDM_RS21495	COG1966	Carbon starvation protein
FFHJCLDM_RS21500	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FFHJCLDM_RS21505	COG2368	4-hydroxyphenylacetate
FFHJCLDM_RS21525	COG3971	2-oxopent-4-enoate hydratase activity
FFHJCLDM_RS21535	COG3384	dioxygenase
FFHJCLDM_RS21540	COG1012	belongs to the aldehyde dehydrogenase family
FFHJCLDM_RS21545	COG0179	Fumarylacetoacetate (FAA) hydrolase
FFHJCLDM_RS21550	COG1846	Transcriptional regulator
FFHJCLDM_RS21555	COG0840	transmembrane signaling receptor activity
FFHJCLDM_RS21560	COG2271	Major facilitator Superfamily
FFHJCLDM_RS21570	COG1063	alcohol dehydrogenase
FFHJCLDM_RS21585	COG1484	DNA-dependent DNA replication
FFHJCLDM_RS21600	COG2966	Psort location CytoplasmicMembrane, score
FFHJCLDM_RS21605	COG2197	response regulator
FFHJCLDM_RS21610	COG2197	response regulator
FFHJCLDM_RS21615	COG4114	ferric iron reductase
FFHJCLDM_RS21645	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
FFHJCLDM_RS21650	COG0456	acetyltransferase
FFHJCLDM_RS21655	COG1011	Hydrolase
FFHJCLDM_RS21665	COG2823	Periplasmic or secreted lipoprotein
FFHJCLDM_RS21675	COG4667	esterase of the alpha-beta hydrolase superfamily
FFHJCLDM_RS21680	COG0084	hydrolase, TatD family'
FFHJCLDM_RS21685	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FFHJCLDM_RS21690	COG1328	CTP reductase activity
FFHJCLDM_RS21725	COG3726	membrane protein affecting hemolysin expression
FFHJCLDM_RS21730	COG0560	Phosphoserine phosphatase
FFHJCLDM_RS21735	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FFHJCLDM_RS21740	COG3172	ATPase kinase involved in NAD metabolism
FFHJCLDM_RS21740	COG1056	cytidyltransferase-related domain
FFHJCLDM_RS21745	COG0488	(ABC) transporter
FFHJCLDM_RS21750	COG0741	lytic transglycosylase activity
FFHJCLDM_RS21770	COG2207	Transcriptional regulator
FFHJCLDM_RS21770	COG3708	Transcriptional regulator
FFHJCLDM_RS21775	COG3045	CreA protein
FFHJCLDM_RS21780	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS21785	COG2205	protein histidine kinase activity
FFHJCLDM_RS21790	COG4452	Inner membrane protein CreD
FFHJCLDM_RS21795	COG0745	RESPONSE REGULATOR receiver
FFHJCLDM_RS21805	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA