locus-tag class description IN878_RS00025 PF06067 Domain of unknown function (DUF932) IN878_RS00030 PF03230 Antirestriction protein IN878_RS00035 PF04002 RadC-like JAB domain IN878_RS00040 PF06174 Protein of unknown function (DUF987) IN878_RS00050 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A IN878_RS00055 PF06755 CbtA_toxin of type IV toxin-antitoxin system IN878_RS00080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IN878_RS00265 PF08291 Peptidase M15 IN878_RS00265 PF01471 Putative peptidoglycan binding domain IN878_RS00305 PF02613 Nitrate reductase delta subunit IN878_RS00310 PF06496 Protein of unknown function (DUF1097) IN878_RS00315 PF03783 Curli production assembly/transport component CsgG IN878_RS00320 PF10614 Type VIII secretion system (T8SS), CsgF protein IN878_RS00325 PF10627 Curli assembly protein CsgE IN878_RS00330 PF00196 Bacterial regulatory proteins, luxR family IN878_RS00335 PF07012 Curlin associated repeat IN878_RS00340 PF07012 Curlin associated repeat IN878_RS00345 PF10610 Thin aggregative fimbriae synthesis protein IN878_RS00355 PF01661 Macro domain IN878_RS00360 PF13091 PLD-like domain IN878_RS00365 PF01757 Acyltransferase family IN878_RS00370 PF04349 Periplasmic glucan biosynthesis protein, MdoG IN878_RS00375 PF00535 Glycosyl transferase family 2 IN878_RS00380 PF07119 Protein of unknown function (DUF1375) IN878_RS00385 PF13984 MsyB protein IN878_RS00390 PF07690 Major Facilitator Superfamily IN878_RS00395 PF03279 Bacterial lipid A biosynthesis acyltransferase IN878_RS00400 PF17773 UPF0176 acylphosphatase like domain IN878_RS00400 PF12368 Rhodanase C-terminal IN878_RS00400 PF00581 Rhodanese-like domain IN878_RS00405 PF04264 YceI-like domain IN878_RS00410 PF01292 Prokaryotic cytochrome b561 IN878_RS00415 PF10968 Protein of unknown function (DUF2770) IN878_RS00420 PF01266 FAD dependent oxidoreductase IN878_RS00425 PF13991 BssS protein family IN878_RS00430 PF06183 DinI-like family IN878_RS00435 PF01979 Amidohydrolase family IN878_RS00440 PF07273 Protein of unknown function (DUF1439) IN878_RS00445 PF04399 Glutaredoxin 2, C terminal domain IN878_RS00445 PF13417 Glutathione S-transferase, N-terminal domain IN878_RS00450 PF07690 Major Facilitator Superfamily IN878_RS00455 PF13302 Acetyltransferase (GNAT) domain IN878_RS00460 PF04337 Protein of unknown function, DUF480 IN878_RS00465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IN878_RS00470 PF03023 Lipid II flippase MurJ IN878_RS00475 PF05130 FlgN protein IN878_RS00480 PF04316 Anti-sigma-28 factor, FlgM IN878_RS00485 PF13144 Chaperone for flagella basal body P-ring formation IN878_RS00490 PF00460 Flagella basal body rod protein IN878_RS00495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IN878_RS00495 PF00460 Flagella basal body rod protein IN878_RS00500 PF03963 Flagellar hook capping protein - N-terminal region IN878_RS00500 PF13860 FlgD Ig-like domain IN878_RS00500 PF13861 FlgD Tudor-like domain IN878_RS00505 PF07559 Flagellar basal body protein FlaE IN878_RS00505 PF00460 Flagella basal body rod protein IN878_RS00505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IN878_RS00510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IN878_RS00510 PF00460 Flagella basal body rod protein IN878_RS00515 PF00460 Flagella basal body rod protein IN878_RS00515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IN878_RS00520 PF02107 Flagellar L-ring protein IN878_RS00525 PF02119 Flagellar P-ring protein IN878_RS00530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IN878_RS00530 PF10135 Rod binding protein IN878_RS00535 PF00460 Flagella basal body rod protein IN878_RS00535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IN878_RS00540 PF00669 Bacterial flagellin N-terminal helical region IN878_RS00545 PF00575 S1 RNA binding domain IN878_RS00545 PF12111 Polyribonucleotide phosphorylase C terminal IN878_RS00545 PF10150 Ribonuclease E/G family IN878_RS00550 PF01479 S4 domain IN878_RS00550 PF00849 RNA pseudouridylate synthase IN878_RS00555 PF02545 Maf-like protein IN878_RS00560 PF02620 Large ribosomal RNA subunit accumulation protein YceD IN878_RS00565 PF01783 Ribosomal L32p protein family IN878_RS00570 PF02504 Fatty acid synthesis protein IN878_RS00575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IN878_RS00575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IN878_RS00580 PF00698 Acyl transferase domain IN878_RS00590 PF00550 Phosphopantetheine attachment site IN878_RS00595 PF00109 Beta-ketoacyl synthase, N-terminal domain IN878_RS00595 PF02801 Beta-ketoacyl synthase, C-terminal domain IN878_RS00600 PF01063 Amino-transferase class IV IN878_RS00605 PF02618 YceG-like family IN878_RS00610 PF02223 Thymidylate kinase IN878_RS00615 PF09115 DNA polymerase III, delta subunit, C terminal IN878_RS00620 PF01026 TatD related DNase IN878_RS00625 PF00367 phosphotransferase system, EIIB IN878_RS00625 PF02378 Phosphotransferase system, EIIC IN878_RS00630 PF00593 TonB dependent receptor IN878_RS00630 PF07715 TonB-dependent Receptor Plug Domain IN878_RS00635 PF01230 HIT domain IN878_RS00640 PF07233 Protein of unknown function (DUF1425) IN878_RS00645 PF13036 Peptidoglycan-synthase activator LpoB IN878_RS00650 PF01636 Phosphotransferase enzyme family IN878_RS00655 PF00933 Glycosyl hydrolase family 3 N terminal domain IN878_RS00660 PF05728 Uncharacterised protein family (UPF0227) IN878_RS00665 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS00670 PF05433 Glycine zipper 2TM domain IN878_RS00675 PF00440 Bacterial regulatory proteins, tetR family IN878_RS00680 PF07338 Protein of unknown function (DUF1471) IN878_RS00685 PF01476 LysM domain IN878_RS00685 PF03734 L,D-transpeptidase catalytic domain IN878_RS00685 PF17969 L,D-transpeptidase C-terminal domain IN878_RS00690 PF02559 CarD-like/TRCF domain IN878_RS00690 PF00270 DEAD/DEAH box helicase IN878_RS00690 PF03461 TRCF domain IN878_RS00690 PF17757 UvrB interaction domain IN878_RS00690 PF00271 Helicase conserved C-terminal domain IN878_RS00695 PF01757 Acyltransferase family IN878_RS00700 PF02687 FtsX-like permease family IN878_RS00700 PF12704 MacB-like periplasmic core domain IN878_RS00705 PF00005 ABC transporter IN878_RS00710 PF02687 FtsX-like permease family IN878_RS00710 PF12704 MacB-like periplasmic core domain IN878_RS00715 PF00480 ROK family IN878_RS00720 PF02146 Sir2 family IN878_RS00725 PF04536 TPM domain IN878_RS00730 PF12158 Protein of unknown function (DUF3592) IN878_RS00735 PF13416 Bacterial extracellular solute-binding protein IN878_RS00740 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS00745 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS00750 PF00005 ABC transporter IN878_RS00750 PF08402 TOBE domain IN878_RS00755 PF01546 Peptidase family M20/M25/M40 IN878_RS00755 PF07687 Peptidase dimerisation domain IN878_RS00760 PF08007 Cupin superfamily protein IN878_RS00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS00765 PF08918 PhoQ Sensor IN878_RS00770 PF00486 Transcriptional regulatory protein, C terminal IN878_RS00770 PF00072 Response regulator receiver domain IN878_RS00775 PF00206 Lyase IN878_RS00775 PF08328 Adenylosuccinate lyase C-terminal IN878_RS00780 PF04356 Protein of unknown function (DUF489) IN878_RS00790 PF00293 NUDIX domain IN878_RS00795 PF00849 RNA pseudouridylate synthase IN878_RS00800 PF00180 Isocitrate/isopropylmalate dehydrogenase IN878_RS00820 PF07166 Protein of unknown function (DUF1398) IN878_RS00825 PF13411 MerR HTH family regulatory protein IN878_RS00830 PF04940 Sensors of blue-light using FAD IN878_RS00830 PF00563 EAL domain IN878_RS00835 PF10798 Biofilm development protein YmgB/AriR IN878_RS00845 PF10798 Biofilm development protein YmgB/AriR IN878_RS00855 PF12792 CSS motif domain associated with EAL IN878_RS00855 PF00563 EAL domain IN878_RS00870 PF16456 YmgD protein IN878_RS00875 PF13436 Glycine-zipper domain IN878_RS00900 PF03776 Septum formation topological specificity factor MinE IN878_RS00905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IN878_RS00910 PF03775 Septum formation inhibitor MinC, C-terminal domain IN878_RS00910 PF05209 Septum formation inhibitor MinC, N-terminal domain IN878_RS00915 PF05666 Fels-1 Prophage Protein-like IN878_RS00920 PF04151 Bacterial pre-peptidase C-terminal domain IN878_RS00925 PF05166 YcgL domain IN878_RS00930 PF01557 Fumarylacetoacetate (FAA) hydrolase family IN878_RS00935 PF03692 Putative zinc- or iron-chelating domain IN878_RS00940 PF06109 Haemolysin E (HlyE) IN878_RS00945 PF00717 Peptidase S24-like IN878_RS00950 PF13438 Domain of unknown function (DUF4113) IN878_RS00950 PF00817 impB/mucB/samB family IN878_RS00950 PF11799 impB/mucB/samB family C-terminal domain IN878_RS00950 PF11798 IMS family HHH motif IN878_RS00955 PF02600 Disulfide bond formation protein DsbB IN878_RS00960 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IN878_RS00965 PF07840 FadR C-terminal domain IN878_RS00965 PF00392 Bacterial regulatory proteins, gntR family IN878_RS00970 PF04293 SpoVR like protein IN878_RS00975 PF01266 FAD dependent oxidoreductase IN878_RS00980 PF00842 Alanine racemase, C-terminal domain IN878_RS00980 PF01168 Alanine racemase, N-terminal domain IN878_RS00985 PF03471 Transporter associated domain IN878_RS00985 PF02080 TrkA-C domain IN878_RS00985 PF00999 Sodium/hydrogen exchanger family IN878_RS00990 PF02016 LD-carboxypeptidase N-terminal domain IN878_RS00990 PF17676 LD-carboxypeptidase C-terminal domain IN878_RS00995 PF01464 Transglycosylase SLT domain IN878_RS01000 PF07317 Flagellar regulator YcgR IN878_RS01000 PF07238 PilZ domain IN878_RS01005 PF04226 Transglycosylase associated protein IN878_RS01015 PF01204 Trehalase IN878_RS01020 PF00381 PTS HPr component phosphorylation site IN878_RS01020 PF05524 PEP-utilising enzyme, N-terminal IN878_RS01020 PF03610 PTS system fructose IIA component IN878_RS01020 PF00391 PEP-utilising enzyme, mobile domain IN878_RS01025 PF02734 DAK2 domain IN878_RS01030 PF02733 Dak1 domain IN878_RS01035 PF00989 PAS fold IN878_RS01035 PF00158 Sigma-54 interaction domain IN878_RS01035 PF02954 Bacterial regulatory protein, Fis family IN878_RS01040 PF03212 Pertactin IN878_RS01040 PF03797 Autotransporter beta-domain IN878_RS01045 PF06071 Protein of unknown function (DUF933) IN878_RS01045 PF01926 50S ribosome-binding GTPase IN878_RS01050 PF01195 Peptidyl-tRNA hydrolase IN878_RS01055 PF10762 Protein of unknown function (DUF2583) IN878_RS01060 PF01740 STAS domain IN878_RS01060 PF00916 Sulfate permease family IN878_RS01065 PF14572 Phosphoribosyl synthetase-associated domain IN878_RS01065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IN878_RS01070 PF00288 GHMP kinases N terminal domain IN878_RS01070 PF08544 GHMP kinases C terminal IN878_RS01075 PF03550 Outer membrane lipoprotein LolB IN878_RS01080 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IN878_RS01080 PF01488 Shikimate / quinate 5-dehydrogenase IN878_RS01080 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IN878_RS01085 PF00472 RF-1 domain IN878_RS01085 PF03462 PCRF domain IN878_RS01090 PF13847 Methyltransferase domain IN878_RS01090 PF17827 PrmC N-terminal domain IN878_RS01095 PF04247 Invasion gene expression up-regulator, SirB IN878_RS01100 PF13369 Transglutaminase-like superfamily IN878_RS01105 PF00793 DAHP synthetase I family IN878_RS01110 PF13940 Toxin Ldr, type I toxin-antitoxin system IN878_RS01115 PF13940 Toxin Ldr, type I toxin-antitoxin system IN878_RS01120 PF13940 Toxin Ldr, type I toxin-antitoxin system IN878_RS01125 PF01699 Sodium/calcium exchanger protein IN878_RS01130 PF06150 ChaB IN878_RS01135 PF04752 ChaC-like protein IN878_RS01140 PF02635 DsrE/DsrF-like family IN878_RS01145 PF11924 Inverse autotransporter, beta-domain IN878_RS01150 PF00196 Bacterial regulatory proteins, luxR family IN878_RS01150 PF00072 Response regulator receiver domain IN878_RS01155 PF07730 Histidine kinase IN878_RS01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS01155 PF00672 HAMP domain IN878_RS01155 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IN878_RS01160 PF07690 Major Facilitator Superfamily IN878_RS01165 PF14710 Respiratory nitrate reductase alpha N-terminal IN878_RS01165 PF01568 Molydopterin dinucleotide binding domain IN878_RS01165 PF00384 Molybdopterin oxidoreductase IN878_RS01170 PF13247 4Fe-4S dicluster domain IN878_RS01170 PF14711 Respiratory nitrate reductase beta C-terminal IN878_RS01175 PF02613 Nitrate reductase delta subunit IN878_RS01180 PF02665 Nitrate reductase gamma subunit IN878_RS01215 PF01842 ACT domain IN878_RS01215 PF00551 Formyl transferase IN878_RS01220 PF02810 SEC-C motif IN878_RS01225 PF01734 Patatin-like phospholipase IN878_RS01230 PF00072 Response regulator receiver domain IN878_RS01235 PF00483 Nucleotidyl transferase IN878_RS01240 PF00816 H-NS histone family IN878_RS01245 PF00265 Thymidine kinase IN878_RS01255 PF00171 Aldehyde dehydrogenase family IN878_RS01255 PF00465 Iron-containing alcohol dehydrogenase IN878_RS01260 PF01914 MarC family integral membrane protein IN878_RS01270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS01280 PF12911 N-terminal TM domain of oligopeptide transport permease C IN878_RS01285 PF00005 ABC transporter IN878_RS01285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS01290 PF00005 ABC transporter IN878_RS01290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS01295 PF04269 Protein of unknown function, DUF440 IN878_RS01300 PF13091 PLD-like domain IN878_RS01300 PF13396 Phospholipase_D-nuclease N-terminal IN878_RS01310 PF07885 Ion channel IN878_RS01310 PF02254 TrkA-N domain IN878_RS01315 PF03795 YCII-related domain IN878_RS01320 PF03544 Gram-negative bacterial TonB protein C-terminal IN878_RS01325 PF03061 Thioesterase superfamily IN878_RS01330 PF04279 Intracellular septation protein A IN878_RS01345 PF03922 OmpW family IN878_RS01350 PF05974 Domain of unknown function (DUF892) IN878_RS01355 PF05974 Domain of unknown function (DUF892) IN878_RS01360 PF10685 Stress-induced bacterial acidophilic repeat motif IN878_RS01365 PF00290 Tryptophan synthase alpha chain IN878_RS01370 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS01375 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IN878_RS01375 PF00218 Indole-3-glycerol phosphate synthase IN878_RS01380 PF00591 Glycosyl transferase family, a/b domain IN878_RS01380 PF02885 Glycosyl transferase family, helical bundle domain IN878_RS01380 PF00117 Glutamine amidotransferase class-I IN878_RS01385 PF04715 Anthranilate synthase component I, N terminal region IN878_RS01385 PF00425 chorismate binding enzyme IN878_RS01390 PF08255 Trp-operon Leader Peptide IN878_RS01395 PF02811 PHP domain IN878_RS01400 PF01300 Telomere recombination IN878_RS01405 PF09972 Predicted membrane protein (DUF2207) IN878_RS01410 PF00849 RNA pseudouridylate synthase IN878_RS01410 PF01479 S4 domain IN878_RS01415 PF12557 Cob(I)alamin adenosyltransferase N terminal IN878_RS01415 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IN878_RS01420 PF00106 short chain dehydrogenase IN878_RS01425 PF01343 Peptidase family S49 IN878_RS01425 PF08496 Peptidase family S49 N-terminal IN878_RS01430 PF10692 Protein of unknown function (DUF2498) IN878_RS01435 PF01131 DNA topoisomerase IN878_RS01435 PF08272 Topoisomerase I zinc-ribbon-like IN878_RS01435 PF01751 Toprim domain IN878_RS01435 PF01396 Topoisomerase DNA binding C4 zinc finger IN878_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS01440 PF03466 LysR substrate binding domain IN878_RS01460 PF00694 Aconitase C-terminal domain IN878_RS01460 PF00330 Aconitase family (aconitate hydratase) IN878_RS01465 PF00925 GTP cyclohydrolase II IN878_RS01470 PF01569 PAP2 superfamily IN878_RS01475 PF06305 Lipopolysaccharide assembly protein A domain IN878_RS01480 PF18073 Rubredoxin metal binding domain IN878_RS01485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IN878_RS01490 PF01253 Translation initiation factor SUI1 IN878_RS01495 PF05433 Glycine zipper 2TM domain IN878_RS01500 PF00455 DeoR C terminal sensor domain IN878_RS01500 PF08220 DeoR-like helix-turn-helix domain IN878_RS01510 PF13426 PAS domain IN878_RS01510 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS01510 PF00563 EAL domain IN878_RS01520 PF00575 S1 RNA binding domain IN878_RS01520 PF00773 RNB domain IN878_RS01520 PF08206 Ribonuclease B OB domain IN878_RS01520 PF17876 Cold shock domain IN878_RS01535 PF04480 Protein of unknown function (DUF559) IN878_RS01540 PF00005 ABC transporter IN878_RS01545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS01545 PF00005 ABC transporter IN878_RS01550 PF12911 N-terminal TM domain of oligopeptide transport permease C IN878_RS01550 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS01555 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS01560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS01565 PF10820 Protein of unknown function (DUF2543) IN878_RS01570 PF00324 Amino acid permease IN878_RS01580 PF00120 Glutamine synthetase, catalytic domain IN878_RS01585 PF07722 Peptidase C26 IN878_RS01590 PF01381 Helix-turn-helix IN878_RS01590 PF07883 Cupin domain IN878_RS01595 PF00171 Aldehyde dehydrogenase family IN878_RS01600 PF01266 FAD dependent oxidoreductase IN878_RS01605 PF00202 Aminotransferase class-III IN878_RS01610 PF00158 Sigma-54 interaction domain IN878_RS01610 PF02954 Bacterial regulatory protein, Fis family IN878_RS01615 PF04012 PspA/IM30 family IN878_RS01620 PF06667 Phage shock protein B IN878_RS01625 PF04024 PspC domain IN878_RS01630 PF09584 Phage shock protein PspD (Phageshock_PspD) IN878_RS01635 PF00581 Rhodanese-like domain IN878_RS01640 PF00128 Alpha amylase, catalytic domain IN878_RS01645 PF01547 Bacterial extracellular solute-binding protein IN878_RS01650 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS01655 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS01660 PF00107 Zinc-binding dehydrogenase IN878_RS01665 PF01261 Xylose isomerase-like TIM barrel IN878_RS01670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IN878_RS01670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IN878_RS01675 PF03632 Glycosyl hydrolase family 65 central catalytic domain IN878_RS01675 PF03636 Glycosyl hydrolase family 65, N-terminal domain IN878_RS01675 PF03633 Glycosyl hydrolase family 65, C-terminal domain IN878_RS01680 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS01685 PF03459 TOBE domain IN878_RS01685 PF00005 ABC transporter IN878_RS01685 PF17912 MalK OB fold domain IN878_RS01690 PF09381 Outer membrane protein G (OmpG) IN878_RS01695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IN878_RS01695 PF00356 Bacterial regulatory proteins, lacI family IN878_RS01700 PF04317 YcjX-like family, DUF463 IN878_RS01705 PF05128 Domain of unknown function (DUF697) IN878_RS01710 PF13188 PAS domain IN878_RS01710 PF18024 Helix-turn-helix domain IN878_RS01710 PF00158 Sigma-54 interaction domain IN878_RS01715 PF08534 Redoxin IN878_RS01720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IN878_RS01720 PF13378 Enolase C-terminal domain-like IN878_RS01725 PF00246 Zinc carboxypeptidase IN878_RS01740 PF03466 LysR substrate binding domain IN878_RS01740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS01745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS01750 PF00924 Mechanosensitive ion channel IN878_RS01755 PF10749 Protein of unknown function (DUF2534) IN878_RS01760 PF00582 Universal stress protein family IN878_RS01765 PF00027 Cyclic nucleotide-binding domain IN878_RS01765 PF00325 Bacterial regulatory proteins, crp family IN878_RS01770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IN878_RS01770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IN878_RS01775 PF03806 AbgT putative transporter family IN878_RS01780 PF01546 Peptidase family M20/M25/M40 IN878_RS01785 PF07687 Peptidase dimerisation domain IN878_RS01785 PF01546 Peptidase family M20/M25/M40 IN878_RS01790 PF03466 LysR substrate binding domain IN878_RS01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS01795 PF01713 Smr domain IN878_RS01800 PF08448 PAS fold IN878_RS01800 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS01805 PF01544 CorA-like Mg2+ transporter protein IN878_RS01810 PF00271 Helicase conserved C-terminal domain IN878_RS01810 PF03880 DbpA RNA binding domain IN878_RS01810 PF00270 DEAD/DEAH box helicase IN878_RS01815 PF01171 PP-loop family IN878_RS01820 PF00582 Universal stress protein family IN878_RS01825 PF00267 Gram-negative porin IN878_RS01830 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IN878_RS01830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IN878_RS01830 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IN878_RS01830 PF10371 Domain of unknown function IN878_RS01830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS01835 PF03891 Domain of unknown function (DUF333) IN878_RS01840 PF03724 META domain IN878_RS01845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IN878_RS01845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IN878_RS01850 PF11739 Dicarboxylate transport IN878_RS01855 PF13617 YnbE-like lipoprotein IN878_RS01860 PF07027 Protein of unknown function (DUF1318) IN878_RS01865 PF14525 AraC-binding-like domain IN878_RS01865 PF12833 Helix-turn-helix domain IN878_RS01870 PF00171 Aldehyde dehydrogenase family IN878_RS01875 PF02728 Copper amine oxidase, N3 domain IN878_RS01875 PF01179 Copper amine oxidase, enzyme domain IN878_RS01875 PF02727 Copper amine oxidase, N2 domain IN878_RS01875 PF07833 Copper amine oxidase N-terminal domain IN878_RS01880 PF01575 MaoC like domain IN878_RS01880 PF00171 Aldehyde dehydrogenase family IN878_RS01885 PF05138 Phenylacetic acid catabolic protein IN878_RS01890 PF06243 Phenylacetic acid degradation B IN878_RS01895 PF05138 Phenylacetic acid catabolic protein IN878_RS01900 PF01883 Iron-sulfur cluster assembly protein IN878_RS01905 PF00970 Oxidoreductase FAD-binding domain IN878_RS01905 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS01905 PF00175 Oxidoreductase NAD-binding domain IN878_RS01910 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS01915 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS01920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IN878_RS01920 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IN878_RS01920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IN878_RS01925 PF03061 Thioesterase superfamily IN878_RS01930 PF00108 Thiolase, N-terminal domain IN878_RS01930 PF02803 Thiolase, C-terminal domain IN878_RS01935 PF00501 AMP-binding enzyme IN878_RS01935 PF14535 AMP-binding enzyme C-terminal domain IN878_RS01940 PF08223 PaaX-like protein C-terminal domain IN878_RS01940 PF07848 PaaX-like protein IN878_RS01945 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS01960 PF00248 Aldo/keto reductase family IN878_RS01965 PF10971 Protein of unknown function (DUF2773) IN878_RS01970 PF01066 CDP-alcohol phosphatidyltransferase IN878_RS01980 PF12146 Serine aminopeptidase, S33 IN878_RS01980 PF12147 Putative methyltransferase IN878_RS01985 PF00782 Dual specificity phosphatase, catalytic domain IN878_RS01990 PF02525 Flavodoxin-like fold IN878_RS01995 PF00270 DEAD/DEAH box helicase IN878_RS01995 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IN878_RS01995 PF04408 Helicase associated domain (HA2) IN878_RS01995 PF00271 Helicase conserved C-terminal domain IN878_RS01995 PF11898 Domain of unknown function (DUF3418) IN878_RS02000 PF02698 DUF218 domain IN878_RS02005 PF00171 Aldehyde dehydrogenase family IN878_RS02015 PF01292 Prokaryotic cytochrome b561 IN878_RS02025 PF01848 Hok/gef family IN878_RS02030 PF00672 HAMP domain IN878_RS02030 PF02203 Tar ligand binding domain homologue IN878_RS02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IN878_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS02035 PF03466 LysR substrate binding domain IN878_RS02040 PF07063 Domain of unknown function (DUF1338) IN878_RS02045 PF04349 Periplasmic glucan biosynthesis protein, MdoG IN878_RS02050 PF04325 Protein of unknown function (DUF465) IN878_RS02055 PF13302 Acetyltransferase (GNAT) domain IN878_RS02060 PF18836 Beta solenoid repeat from YDCK IN878_RS02065 PF03595 Voltage-dependent anion channel IN878_RS02070 PF03848 Tellurite resistance protein TehB IN878_RS02075 PF11769 Protein of unknown function (DUF3313) IN878_RS02085 PF12323 Helix-turn-helix domain IN878_RS02085 PF07282 Putative transposase DNA-binding domain IN878_RS02085 PF01385 Probable transposase IN878_RS02090 PF03594 Benzoate membrane transport protein IN878_RS02095 PF07883 Cupin domain IN878_RS02095 PF01381 Helix-turn-helix IN878_RS02100 PF12392 Collagenase IN878_RS02100 PF01136 Peptidase family U32 IN878_RS02105 PF10829 Protein of unknown function (DUF2554) IN878_RS02110 PF07927 HicA toxin of bacterial toxin-antitoxin, IN878_RS02290 PF01471 Putative peptidoglycan binding domain IN878_RS02290 PF08291 Peptidase M15 IN878_RS02310 PF00239 Resolvase, N terminal domain IN878_RS02310 PF13408 Recombinase zinc beta ribbon domain IN878_RS02310 PF07508 Recombinase IN878_RS02330 PF00155 Aminotransferase class I and II IN878_RS02330 PF00392 Bacterial regulatory proteins, gntR family IN878_RS02335 PF13416 Bacterial extracellular solute-binding protein IN878_RS02340 PF08402 TOBE domain IN878_RS02340 PF00005 ABC transporter IN878_RS02345 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS02350 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS02355 PF00171 Aldehyde dehydrogenase family IN878_RS02365 PF10753 Toxin GhoT_OrtT IN878_RS02370 PF10735 Protein of unknown function (DUF2526) IN878_RS02375 PF04657 Putative inner membrane exporter, YdcZ IN878_RS02380 PF00583 Acetyltransferase (GNAT) family IN878_RS02385 PF00107 Zinc-binding dehydrogenase IN878_RS02385 PF16884 N-terminal domain of oxidoreductase IN878_RS02390 PF07729 FCD domain IN878_RS02390 PF00392 Bacterial regulatory proteins, gntR family IN878_RS02395 PF00593 TonB dependent receptor IN878_RS02395 PF07715 TonB-dependent Receptor Plug Domain IN878_RS02405 PF00324 Amino acid permease IN878_RS02410 PF13417 Glutathione S-transferase, N-terminal domain IN878_RS02415 PF17520 Family of unknown function (DUF5445) IN878_RS02445 PF13808 DDE_Tnp_1-associated IN878_RS02445 PF01609 Transposase DDE domain IN878_RS02450 PF01361 Tautomerase enzyme IN878_RS02455 PF01613 Flavin reductase like domain IN878_RS02460 PF00797 N-acetyltransferase IN878_RS02465 PF02567 Phenazine biosynthesis-like protein IN878_RS02470 PF02665 Nitrate reductase gamma subunit IN878_RS02475 PF02613 Nitrate reductase delta subunit IN878_RS02480 PF13247 4Fe-4S dicluster domain IN878_RS02480 PF14711 Respiratory nitrate reductase beta C-terminal IN878_RS02485 PF00384 Molybdopterin oxidoreductase IN878_RS02485 PF01568 Molydopterin dinucleotide binding domain IN878_RS02485 PF14710 Respiratory nitrate reductase alpha N-terminal IN878_RS02490 PF07690 Major Facilitator Superfamily IN878_RS02500 PF00267 Gram-negative porin IN878_RS02505 PF00892 EamA-like transporter family IN878_RS02515 PF09163 Formate dehydrogenase N, transmembrane IN878_RS02515 PF12800 4Fe-4S binding domain IN878_RS02515 PF13247 4Fe-4S dicluster domain IN878_RS02520 PF01292 Prokaryotic cytochrome b561 IN878_RS02525 PF01381 Helix-turn-helix IN878_RS02530 PF00107 Zinc-binding dehydrogenase IN878_RS02530 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS02535 PF03949 Malic enzyme, NAD binding domain IN878_RS02535 PF00390 Malic enzyme, N-terminal domain IN878_RS02540 PF08136 30S ribosomal protein subunit S22 family IN878_RS02545 PF10684 Putative biofilm-dependent modulation protein IN878_RS02550 PF02566 OsmC-like protein IN878_RS02555 PF00005 ABC transporter IN878_RS02555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS02560 PF00005 ABC transporter IN878_RS02560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS02565 PF12911 N-terminal TM domain of oligopeptide transport permease C IN878_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS02575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS02580 PF01427 D-ala-D-ala dipeptidase IN878_RS02585 PF13426 PAS domain IN878_RS02585 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS02585 PF00563 EAL domain IN878_RS02590 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS02600 PF02638 Glycosyl hydrolase-like 10 IN878_RS02605 PF13520 Amino acid permease IN878_RS02610 PF00282 Pyridoxal-dependent decarboxylase conserved domain IN878_RS02615 PF05193 Peptidase M16 inactive domain IN878_RS02615 PF00675 Insulinase (Peptidase family M16) IN878_RS02620 PF07715 TonB-dependent Receptor Plug Domain IN878_RS02625 PF06472 ABC transporter transmembrane region 2 IN878_RS02625 PF00005 ABC transporter IN878_RS02635 PF04055 Radical SAM superfamily IN878_RS02635 PF13186 Iron-sulfur cluster-binding domain IN878_RS02640 PF00884 Sulfatase IN878_RS02645 PF12833 Helix-turn-helix domain IN878_RS02650 PF17073 Two-component-system connector protein IN878_RS02655 PF00384 Molybdopterin oxidoreductase IN878_RS02660 PF09160 FimH, mannose binding IN878_RS02665 PF00419 Fimbrial protein IN878_RS02670 PF00419 Fimbrial protein IN878_RS02690 PF04539 Sigma-70 region 3 IN878_RS02690 PF03979 Sigma-70 factor, region 1.1 IN878_RS02690 PF00140 Sigma-70 factor, region 1.2 IN878_RS02690 PF04542 Sigma-70 region 2 IN878_RS02690 PF04545 Sigma-70, region 4 IN878_RS02705 PF09992 Phosphodiester glycosidase IN878_RS02710 PF01544 CorA-like Mg2+ transporter protein IN878_RS02725 PF05717 IS66 Orf2 like protein IN878_RS02745 PF13007 Transposase C of IS166 homeodomain IN878_RS02745 PF13005 zinc-finger binding domain of transposase IS66 IN878_RS02745 PF13817 IS66 C-terminal element IN878_RS02745 PF03050 Transposase IS66 family IN878_RS02785 PF07804 HipA-like C-terminal domain IN878_RS02785 PF13657 HipA N-terminal domain IN878_RS02790 PF01381 Helix-turn-helix IN878_RS02795 PF03797 Autotransporter beta-domain IN878_RS02805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS02805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IN878_RS02810 PF04198 Putative sugar-binding domain IN878_RS02815 PF00005 ABC transporter IN878_RS02820 PF02653 Branched-chain amino acid transport system / permease component IN878_RS02825 PF02653 Branched-chain amino acid transport system / permease component IN878_RS02830 PF13407 Periplasmic binding protein domain IN878_RS02835 PF01791 DeoC/LacD family aldolase IN878_RS02840 PF03992 Antibiotic biosynthesis monooxygenase IN878_RS02845 PF13649 Methyltransferase domain IN878_RS02850 PF01062 Bestrophin, RFP-TM, chloride channel IN878_RS02855 PF01232 Mannitol dehydrogenase Rossmann domain IN878_RS02855 PF08125 Mannitol dehydrogenase C-terminal domain IN878_RS02865 PF13811 Domain of unknown function (DUF4186) IN878_RS02870 PF04960 Glutaminase IN878_RS02875 PF00171 Aldehyde dehydrogenase family IN878_RS02880 PF03466 LysR substrate binding domain IN878_RS02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS02890 PF07690 Major Facilitator Superfamily IN878_RS02895 PF01914 MarC family integral membrane protein IN878_RS02900 PF01047 MarR family IN878_RS02905 PF12833 Helix-turn-helix domain IN878_RS02910 PF13999 MarB protein IN878_RS02915 PF00892 EamA-like transporter family IN878_RS02920 PF07690 Major Facilitator Superfamily IN878_RS02930 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS02935 PF04076 Bacterial OB fold (BOF) protein IN878_RS02940 PF02464 Competence-damaged protein IN878_RS02945 PF01432 Peptidase family M3 IN878_RS02950 PF00106 short chain dehydrogenase IN878_RS02955 PF00392 Bacterial regulatory proteins, gntR family IN878_RS02955 PF07729 FCD domain IN878_RS02960 PF14001 YdfZ protein IN878_RS02965 PF08125 Mannitol dehydrogenase C-terminal domain IN878_RS02965 PF01232 Mannitol dehydrogenase Rossmann domain IN878_RS02985 PF02796 Helix-turn-helix domain of resolvase IN878_RS02985 PF00239 Resolvase, N terminal domain IN878_RS02990 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IN878_RS02995 PF07484 Phage Tail Collar Domain IN878_RS02995 PF03335 Phage tail fibre repeat IN878_RS02995 PF08400 Prophage tail fibre N-terminal IN878_RS03005 PF07471 Phage DNA packaging protein Nu1 IN878_RS03010 PF13132 Domain of unknown function (DUF3950) IN878_RS03015 PF07166 Protein of unknown function (DUF1398) IN878_RS03020 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system IN878_RS03045 PF00313 'Cold-shock' DNA-binding domain IN878_RS03050 PF10721 Protein of unknown function (DUF2514) IN878_RS03055 PF00959 Phage lysozyme IN878_RS03060 PF07041 Protein of unknown function (DUF1327) IN878_RS03065 PF04971 Bacteriophage P21 holin S IN878_RS03070 PF00313 'Cold-shock' DNA-binding domain IN878_RS03075 PF00313 'Cold-shock' DNA-binding domain IN878_RS03085 PF03589 Antitermination protein IN878_RS03090 PF06147 Protein of unknown function (DUF968) IN878_RS03105 PF01848 Hok/gef family IN878_RS03110 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IN878_RS03115 PF04221 RelB antitoxin IN878_RS03125 PF14282 FlxA-like protein IN878_RS03160 PF00665 Integrase core domain IN878_RS03160 PF13936 Helix-turn-helix domain IN878_RS03175 PF13276 HTH-like domain IN878_RS03175 PF01527 Transposase IN878_RS03175 PF00665 Integrase core domain IN878_RS03180 PF05717 IS66 Orf2 like protein IN878_RS03185 PF13817 IS66 C-terminal element IN878_RS03185 PF03050 Transposase IS66 family IN878_RS03185 PF13005 zinc-finger binding domain of transposase IS66 IN878_RS03185 PF13007 Transposase C of IS166 homeodomain IN878_RS03195 PF00589 Phage integrase family IN878_RS03195 PF12167 Arm DNA-binding domain IN878_RS03205 PF00107 Zinc-binding dehydrogenase IN878_RS03205 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS03210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IN878_RS03210 PF13378 Enolase C-terminal domain-like IN878_RS03215 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IN878_RS03220 PF06932 Protein of unknown function (DUF1283) IN878_RS03225 PF13302 Acetyltransferase (GNAT) domain IN878_RS03230 PF06788 Uncharacterised protein family (UPF0257) IN878_RS03235 PF06649 Protein of unknown function (DUF1161) IN878_RS03240 PF00384 Molybdopterin oxidoreductase IN878_RS03240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IN878_RS03240 PF01568 Molydopterin dinucleotide binding domain IN878_RS03245 PF00384 Molybdopterin oxidoreductase IN878_RS03245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IN878_RS03245 PF01568 Molydopterin dinucleotide binding domain IN878_RS03250 PF12800 4Fe-4S binding domain IN878_RS03250 PF13247 4Fe-4S dicluster domain IN878_RS03255 PF04976 DMSO reductase anchor subunit (DmsC) IN878_RS03260 PF02613 Nitrate reductase delta subunit IN878_RS03265 PF00654 Voltage gated chloride channel IN878_RS03275 PF00480 ROK family IN878_RS03280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS03280 PF03466 LysR substrate binding domain IN878_RS03285 PF07690 Major Facilitator Superfamily IN878_RS03300 PF00089 Trypsin IN878_RS03305 PF00893 Small Multidrug Resistance protein IN878_RS03310 PF00893 Small Multidrug Resistance protein IN878_RS03315 PF01594 AI-2E family transporter IN878_RS03320 PF02233 NAD(P) transhydrogenase beta subunit IN878_RS03325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IN878_RS03325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IN878_RS03325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IN878_RS03330 PF07338 Protein of unknown function (DUF1471) IN878_RS03335 PF13520 Amino acid permease IN878_RS03345 PF06942 GlpM protein IN878_RS03350 PF00486 Transcriptional regulatory protein, C terminal IN878_RS03350 PF00072 Response regulator receiver domain IN878_RS03355 PF00672 HAMP domain IN878_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS03355 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS03360 PF05472 DNA replication terminus site-binding protein (Ter protein) IN878_RS03365 PF00206 Lyase IN878_RS03365 PF10415 Fumarase C C-terminus IN878_RS03370 PF05681 Fumarate hydratase (Fumerase) IN878_RS03370 PF05683 Fumarase C-terminus IN878_RS03375 PF01238 Phosphomannose isomerase type I IN878_RS03380 PF06097 Bacterial protein of unknown function (DUF945) IN878_RS03385 PF03573 outer membrane porin, OprD family IN878_RS03395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IN878_RS03395 PF00703 Glycosyl hydrolases family 2 IN878_RS03395 PF02837 Glycosyl hydrolases family 2, sugar binding domain IN878_RS03400 PF00440 Bacterial regulatory proteins, tetR family IN878_RS03410 PF00356 Bacterial regulatory proteins, lacI family IN878_RS03410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IN878_RS03415 PF00367 phosphotransferase system, EIIB IN878_RS03415 PF02378 Phosphotransferase system, EIIC IN878_RS03420 PF00155 Aminotransferase class I and II IN878_RS03425 PF00962 Adenosine/AMP deaminase IN878_RS03430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IN878_RS03430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IN878_RS03440 PF05321 Haemolysin expression modulating protein IN878_RS03445 PF10754 Protein of unknown function (DUF2569) IN878_RS03450 PF02508 Rnf-Nqr subunit, membrane protein IN878_RS03455 PF04060 Putative Fe-S cluster IN878_RS03460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IN878_RS03460 PF13375 RnfC Barrel sandwich hybrid domain IN878_RS03460 PF10531 SLBB domain IN878_RS03460 PF12838 4Fe-4S dicluster domain IN878_RS03465 PF03116 NQR2, RnfD, RnfE family IN878_RS03470 PF04205 FMN-binding domain IN878_RS03475 PF02508 Rnf-Nqr subunit, membrane protein IN878_RS03480 PF00633 Helix-hairpin-helix motif IN878_RS03480 PF10576 Iron-sulfur binding domain of endonuclease III IN878_RS03480 PF00730 HhH-GPD superfamily base excision DNA repair protein IN878_RS03485 PF00854 POT family IN878_RS03490 PF00043 Glutathione S-transferase, C-terminal domain IN878_RS03490 PF02798 Glutathione S-transferase, N-terminal domain IN878_RS03495 PF08543 Phosphomethylpyrimidine kinase IN878_RS03500 PF00579 tRNA synthetases class I (W and Y) IN878_RS03500 PF01479 S4 domain IN878_RS03505 PF01243 Pyridoxamine 5'-phosphate oxidase IN878_RS03505 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IN878_RS03510 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme IN878_RS03515 PF03702 Anhydro-N-acetylmuramic acid kinase IN878_RS03520 PF05433 Glycine zipper 2TM domain IN878_RS03525 PF01047 MarR family IN878_RS03530 PF07869 Protein of unknown function (DUF1656) IN878_RS03535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS03535 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS03540 PF04632 Fusaric acid resistance protein family IN878_RS03545 PF00080 Copper/zinc superoxide dismutase (SODC) IN878_RS03550 PF00248 Aldo/keto reductase family IN878_RS03555 PF06945 Protein of unknown function (DUF1289) IN878_RS03560 PF00440 Bacterial regulatory proteins, tetR family IN878_RS03560 PF16925 Tetracyclin repressor-like, C-terminal domain IN878_RS03565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IN878_RS03570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IN878_RS03575 PF00929 Exonuclease IN878_RS03580 PF00270 DEAD/DEAH box helicase IN878_RS03580 PF08494 DEAD/H associated IN878_RS03580 PF00271 Helicase conserved C-terminal domain IN878_RS03585 PF00462 Glutaredoxin IN878_RS03590 PF00877 NlpC/P60 family IN878_RS03595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IN878_RS03595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IN878_RS03600 PF07690 Major Facilitator Superfamily IN878_RS03610 PF00356 Bacterial regulatory proteins, lacI family IN878_RS03615 PF03466 LysR substrate binding domain IN878_RS03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS03620 PF07690 Major Facilitator Superfamily IN878_RS03630 PF00677 Lumazine binding domain IN878_RS03635 PF01554 MatE IN878_RS03640 PF16168 Adhesin of bacterial autotransporter system, probable stalk IN878_RS03640 PF03212 Pertactin IN878_RS03655 PF08803 Putative mono-oxygenase ydhR IN878_RS03660 PF13454 FAD-NAD(P)-binding IN878_RS03670 PF01292 Prokaryotic cytochrome b561 IN878_RS03675 PF13247 4Fe-4S dicluster domain IN878_RS03685 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 IN878_RS03685 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain IN878_RS03690 PF13247 4Fe-4S dicluster domain IN878_RS03690 PF12800 4Fe-4S binding domain IN878_RS03695 PF10965 Protein of unknown function (DUF2767) IN878_RS03700 PF02887 Pyruvate kinase, alpha/beta domain IN878_RS03700 PF00224 Pyruvate kinase, barrel domain IN878_RS03705 PF04728 Lipoprotein leucine-zipper IN878_RS03710 PF03734 L,D-transpeptidase catalytic domain IN878_RS03710 PF01476 LysM domain IN878_RS03710 PF17969 L,D-transpeptidase C-terminal domain IN878_RS03715 PF02657 Fe-S metabolism associated domain IN878_RS03720 PF00266 Aminotransferase class-V IN878_RS03725 PF01458 Uncharacterized protein family (UPF0051) IN878_RS03730 PF00005 ABC transporter IN878_RS03735 PF01458 Uncharacterized protein family (UPF0051) IN878_RS03740 PF01521 Iron-sulphur cluster biosynthesis IN878_RS03745 PF15930 Domain of unknown function IN878_RS03750 PF03061 Thioesterase superfamily IN878_RS03755 PF13183 4Fe-4S dicluster domain IN878_RS03755 PF02913 FAD linked oxidases, C-terminal domain IN878_RS03755 PF01565 FAD binding domain IN878_RS03760 PF01594 AI-2E family transporter IN878_RS03770 PF08965 Domain of unknown function (DUF1870) IN878_RS03775 PF07690 Major Facilitator Superfamily IN878_RS03780 PF07690 Major Facilitator Superfamily IN878_RS03785 PF08501 Shikimate dehydrogenase substrate binding domain IN878_RS03785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IN878_RS03790 PF01487 Type I 3-dehydroquinase IN878_RS03795 PF01144 Coenzyme A transferase IN878_RS03800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IN878_RS03800 PF02770 Acyl-CoA dehydrogenase, middle domain IN878_RS03800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IN878_RS03805 PF12833 Helix-turn-helix domain IN878_RS03805 PF02311 AraC-like ligand binding domain IN878_RS03810 PF01012 Electron transfer flavoprotein domain IN878_RS03815 PF00766 Electron transfer flavoprotein FAD-binding domain IN878_RS03815 PF01012 Electron transfer flavoprotein domain IN878_RS03820 PF01494 FAD binding domain IN878_RS03830 PF00501 AMP-binding enzyme IN878_RS03830 PF13193 AMP-binding enzyme C-terminal domain IN878_RS03835 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IN878_RS03835 PF02896 PEP-utilising enzyme, TIM barrel domain IN878_RS03835 PF00391 PEP-utilising enzyme, mobile domain IN878_RS03840 PF03618 Kinase/pyrophosphorylase IN878_RS03845 PF00793 DAHP synthetase I family IN878_RS03850 PF10636 Hemin uptake protein hemP IN878_RS03855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IN878_RS03865 PF00877 NlpC/P60 family IN878_RS03870 PF00005 ABC transporter IN878_RS03875 PF00255 Glutathione peroxidase IN878_RS03880 PF01032 FecCD transport family IN878_RS03885 PF00216 Bacterial DNA-binding protein IN878_RS03890 PF01588 Putative tRNA binding domain IN878_RS03890 PF03484 tRNA synthetase B5 domain IN878_RS03890 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IN878_RS03890 PF03483 B3/4 domain IN878_RS03890 PF03147 Ferredoxin-fold anticodon binding domain IN878_RS03895 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IN878_RS03895 PF01409 tRNA synthetases class II core domain (F) IN878_RS03905 PF00453 Ribosomal protein L20 IN878_RS03910 PF01632 Ribosomal protein L35 IN878_RS03915 PF05198 Translation initiation factor IF-3, N-terminal domain IN878_RS03915 PF00707 Translation initiation factor IF-3, C-terminal domain IN878_RS03920 PF02824 TGS domain IN878_RS03920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IN878_RS03920 PF03129 Anticodon binding domain IN878_RS03920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IN878_RS03935 PF04338 Protein of unknown function, DUF481 IN878_RS03940 PF00294 pfkB family carbohydrate kinase IN878_RS03945 PF11080 Endoribonuclease GhoS IN878_RS03950 PF03881 Fructosamine kinase IN878_RS03955 PF14002 YniB-like protein IN878_RS03960 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS03965 PF04307 LexA-binding, inner membrane-associated putative hydrolase IN878_RS03970 PF00375 Sodium:dicarboxylate symporter family IN878_RS03980 PF10729 Cell division activator CedA IN878_RS03985 PF06628 Catalase-related immune-responsive IN878_RS03985 PF00199 Catalase IN878_RS03985 PF18011 C-terminal domain found in long catalases IN878_RS03990 PF04794 YdjC-like protein IN878_RS03995 PF02056 Family 4 glycosyl hydrolase IN878_RS03995 PF11975 Family 4 glycosyl hydrolase C-terminal domain IN878_RS04000 PF12833 Helix-turn-helix domain IN878_RS04000 PF07883 Cupin domain IN878_RS04005 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IN878_RS04010 PF02378 Phosphotransferase system, EIIC IN878_RS04015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS04020 PF04355 SmpA / OmlA family IN878_RS04025 PF02540 NAD synthase IN878_RS04035 PF05962 HutD IN878_RS04040 PF07813 LTXXQ motif family protein IN878_RS04045 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IN878_RS04050 PF04996 Succinylarginine dihydrolase IN878_RS04055 PF00171 Aldehyde dehydrogenase family IN878_RS04060 PF04958 Arginine N-succinyltransferase beta subunit IN878_RS04065 PF00202 Aminotransferase class-III IN878_RS04070 PF03372 Endonuclease/Exonuclease/phosphatase family IN878_RS04075 PF09335 SNARE associated Golgi protein IN878_RS04085 PF09335 SNARE associated Golgi protein IN878_RS04090 PF02627 Carboxymuconolactone decarboxylase family IN878_RS04095 PF13416 Bacterial extracellular solute-binding protein IN878_RS04100 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS04105 PF00005 ABC transporter IN878_RS04110 PF00581 Rhodanese-like domain IN878_RS04115 PF01066 CDP-alcohol phosphatidyltransferase IN878_RS04120 PF00293 NUDIX domain IN878_RS04125 PF07383 Protein of unknown function (DUF1496) IN878_RS04130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IN878_RS04130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IN878_RS04135 PF06889 Protein of unknown function (DUF1266) IN878_RS04140 PF01751 Toprim domain IN878_RS04140 PF01131 DNA topoisomerase IN878_RS04145 PF00586 AIR synthase related protein, N-terminal domain IN878_RS04145 PF02769 AIR synthase related protein, C-terminal domain IN878_RS04150 PF00881 Nitroreductase family IN878_RS04155 PF01343 Peptidase family S49 IN878_RS04160 PF17763 Glutaminase/Asparaginase C-terminal domain IN878_RS04160 PF00710 Asparaginase, N-terminal IN878_RS04165 PF00857 Isochorismatase family IN878_RS04170 PF00083 Sugar (and other) transporter IN878_RS04175 PF00455 DeoR C terminal sensor domain IN878_RS04175 PF08220 DeoR-like helix-turn-helix domain IN878_RS04180 PF00248 Aldo/keto reductase family IN878_RS04185 PF00294 pfkB family carbohydrate kinase IN878_RS04190 PF01116 Fructose-bisphosphate aldolase class-II IN878_RS04195 PF00107 Zinc-binding dehydrogenase IN878_RS04195 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS04200 PF00083 Sugar (and other) transporter IN878_RS04205 PF00107 Zinc-binding dehydrogenase IN878_RS04205 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS04210 PF07023 Protein of unknown function (DUF1315) IN878_RS04215 PF01641 SelR domain IN878_RS04220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IN878_RS04220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IN878_RS04225 PF01263 Aldose 1-epimerase IN878_RS04230 PF00248 Aldo/keto reductase family IN878_RS04235 PF06629 MltA-interacting protein MipA IN878_RS04240 PF06798 PrkA serine protein kinase C-terminal domain IN878_RS04240 PF08298 PrkA AAA domain IN878_RS04245 PF04285 Protein of unknown function (DUF444) IN878_RS04250 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS04250 PF17158 Membrane-associated sensor, integral membrane domain IN878_RS04255 PF17155 Gammaproteobacterial periplasmic sensor domain IN878_RS04255 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS04260 PF04073 Aminoacyl-tRNA editing domain IN878_RS04270 PF04284 Protein of unknown function (DUF441) IN878_RS04275 PF12833 Helix-turn-helix domain IN878_RS04275 PF02311 AraC-like ligand binding domain IN878_RS04280 PF07690 Major Facilitator Superfamily IN878_RS04285 PF04343 Protein of unknown function, DUF488 IN878_RS04290 PF03891 Domain of unknown function (DUF333) IN878_RS04295 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS04295 PF13185 GAF domain IN878_RS04310 PF04226 Transglycosylase associated protein IN878_RS04315 PF08956 Domain of unknown function (DUF1869) IN878_RS04320 PF09313 Domain of unknown function (DUF1971) IN878_RS04325 PF01810 LysE type translocator IN878_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS04330 PF03466 LysR substrate binding domain IN878_RS04335 PF00180 Isocitrate/isopropylmalate dehydrogenase IN878_RS04345 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IN878_RS04345 PF00355 Rieske [2Fe-2S] domain IN878_RS04350 PF00970 Oxidoreductase FAD-binding domain IN878_RS04350 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS04350 PF00175 Oxidoreductase NAD-binding domain IN878_RS04355 PF00570 HRDC domain IN878_RS04355 PF01612 3'-5' exonuclease IN878_RS04360 PF13193 AMP-binding enzyme C-terminal domain IN878_RS04360 PF00501 AMP-binding enzyme IN878_RS04365 PF03843 Outer membrane lipoprotein Slp family IN878_RS04370 PF00814 Glycoprotease family IN878_RS04375 PF13307 Helicase C-terminal domain IN878_RS04375 PF04851 Type III restriction enzyme, res subunit IN878_RS04380 PF01042 Endoribonuclease L-PSP IN878_RS04385 PF08986 Domain of unknown function (DUF1889) IN878_RS04390 PF03701 Uncharacterised protein family (UPF0181) IN878_RS04395 PF00425 chorismate binding enzyme IN878_RS04395 PF04715 Anthranilate synthase component I, N terminal region IN878_RS04400 PF00293 NUDIX domain IN878_RS04405 PF03313 Serine dehydratase alpha chain IN878_RS04405 PF03315 Serine dehydratase beta chain IN878_RS04410 PF00563 EAL domain IN878_RS04410 PF12792 CSS motif domain associated with EAL IN878_RS04415 PF03471 Transporter associated domain IN878_RS04415 PF03741 Integral membrane protein TerC family IN878_RS04420 PF03610 PTS system fructose IIA component IN878_RS04420 PF03830 PTS system sorbose subfamily IIB component IN878_RS04425 PF03609 PTS system sorbose-specific iic component IN878_RS04430 PF03613 PTS system mannose/fructose/sorbose family IID component IN878_RS04435 PF06173 Protein of unknown function (DUF986) IN878_RS04440 PF02659 Putative manganese efflux pump IN878_RS04445 PF13847 Methyltransferase domain IN878_RS04450 PF00313 'Cold-shock' DNA-binding domain IN878_RS04455 PF10736 Protein of unknown function (DUF2627) IN878_RS04460 PF13974 YebO-like protein IN878_RS04465 PF13998 MgrB protein IN878_RS04470 PF13996 YobH-like protein IN878_RS04475 PF09339 IclR helix-turn-helix domain IN878_RS04475 PF01614 Bacterial transcriptional regulator IN878_RS04480 PF07690 Major Facilitator Superfamily IN878_RS04485 PF01435 Peptidase family M48 IN878_RS04490 PF03572 Peptidase family S41 IN878_RS04490 PF11818 C-terminal domain of tail specific protease (DUF3340) IN878_RS04490 PF00595 PDZ domain IN878_RS04490 PF17804 Tail specific protease N-terminal domain IN878_RS04495 PF17516 ProQ C-terminal domain IN878_RS04495 PF04352 ProQ/FINO family IN878_RS04500 PF13185 GAF domain IN878_RS04505 PF04403 Paraquat-inducible protein A IN878_RS04510 PF02470 MlaD protein IN878_RS04515 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF IN878_RS04515 PF01189 16S rRNA methyltransferase RsmB/F IN878_RS04515 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IN878_RS04520 PF07351 Protein of unknown function (DUF1480) IN878_RS04525 PF07358 Protein of unknown function (DUF1482) IN878_RS04530 PF00149 Calcineurin-like phosphoesterase IN878_RS04535 PF10709 Protein of unknown function (DUF2511) IN878_RS04540 PF05425 Copper resistance protein D IN878_RS04545 PF04234 CopC domain IN878_RS04550 PF06440 DNA polymerase III, theta subunit IN878_RS04555 PF00795 Carbon-nitrogen hydrolase IN878_RS04560 PF00929 Exonuclease IN878_RS04565 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IN878_RS04565 PF00326 Prolyl oligopeptidase family IN878_RS04570 PF04391 Protein of unknown function (DUF533) IN878_RS04575 PF13995 YebF-like protein IN878_RS04580 PF07130 YebG protein IN878_RS04585 PF02222 ATP-grasp domain IN878_RS04590 PF01081 KDPG and KHG aldolase IN878_RS04595 PF00920 Dehydratase family IN878_RS04600 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IN878_RS04600 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IN878_RS04605 PF01380 SIS domain IN878_RS04605 PF01418 Helix-turn-helix domain, rpiR family IN878_RS04610 PF00224 Pyruvate kinase, barrel domain IN878_RS04610 PF02887 Pyruvate kinase, alpha/beta domain IN878_RS04615 PF03279 Bacterial lipid A biosynthesis acyltransferase IN878_RS04620 PF01551 Peptidase family M23 IN878_RS04620 PF08525 Opacity-associated protein A N-terminal motif IN878_RS04620 PF01476 LysM domain IN878_RS04625 PF01297 Zinc-uptake complex component A periplasmic IN878_RS04630 PF00005 ABC transporter IN878_RS04635 PF00950 ABC 3 transport family IN878_RS04640 PF17864 RuvB AAA lid domain IN878_RS04640 PF05491 RuvB C-terminal winged helix domain IN878_RS04640 PF05496 Holliday junction DNA helicase RuvB P-loop domain IN878_RS04645 PF01330 RuvA N terminal domain IN878_RS04645 PF07499 RuvA, C-terminal domain IN878_RS04655 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family IN878_RS04660 PF02075 Crossover junction endodeoxyribonuclease RuvC IN878_RS04665 PF01709 Transcriptional regulator IN878_RS04670 PF00293 NUDIX domain IN878_RS04675 PF02938 GAD domain IN878_RS04675 PF00152 tRNA synthetases class II (D, K and N) IN878_RS04675 PF01336 OB-fold nucleic acid binding domain IN878_RS04680 PF00857 Isochorismatase family IN878_RS04685 PF01904 Protein of unknown function DUF72 IN878_RS04690 PF01124 MAPEG family IN878_RS04695 PF13649 Methyltransferase domain IN878_RS04700 PF08003 Protein of unknown function (DUF1698) IN878_RS04710 PF03264 NapC/NirT cytochrome c family, N-terminal region IN878_RS04715 PF03932 CutC family IN878_RS04720 PF06185 YecM protein IN878_RS04725 PF00750 tRNA synthetases class I (R) IN878_RS04725 PF05746 DALR anticodon binding domain IN878_RS04725 PF03485 Arginyl tRNA synthetase N terminal domain IN878_RS04735 PF06366 Flagellar protein FlhE IN878_RS04740 PF00771 FHIPEP family IN878_RS04745 PF01312 FlhB HrpN YscU SpaS Family IN878_RS04750 PF04344 Chemotaxis phosphatase, CheZ IN878_RS04755 PF00072 Response regulator receiver domain IN878_RS04760 PF00072 Response regulator receiver domain IN878_RS04760 PF01339 CheB methylesterase IN878_RS04765 PF03705 CheR methyltransferase, all-alpha domain IN878_RS04765 PF01739 CheR methyltransferase, SAM binding domain IN878_RS04770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IN878_RS04770 PF00672 HAMP domain IN878_RS04770 PF02203 Tar ligand binding domain homologue IN878_RS04775 PF02203 Tar ligand binding domain homologue IN878_RS04775 PF00672 HAMP domain IN878_RS04775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IN878_RS04780 PF01584 CheW-like domain IN878_RS04785 PF02895 Signal transducing histidine kinase, homodimeric domain IN878_RS04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS04785 PF01584 CheW-like domain IN878_RS04785 PF09078 CheY binding IN878_RS04785 PF01627 Hpt domain IN878_RS04790 PF13677 Membrane MotB of proton-channel complex MotA/MotB IN878_RS04790 PF00691 OmpA family IN878_RS04795 PF01618 MotA/TolQ/ExbB proton channel family IN878_RS04800 PF05280 Flagellar transcriptional activator (FlhC) IN878_RS04805 PF05247 Flagellar transcriptional activator (FlhD) IN878_RS04810 PF00582 Universal stress protein family IN878_RS04815 PF00982 Glycosyltransferase family 20 IN878_RS04820 PF02358 Trehalose-phosphatase IN878_RS04825 PF02653 Branched-chain amino acid transport system / permease component IN878_RS04830 PF00005 ABC transporter IN878_RS04835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IN878_RS04840 PF00210 Ferritin-like domain IN878_RS04845 PF10964 Protein of unknown function (DUF2766) IN878_RS04855 PF13992 YecR-like lipoprotein IN878_RS04860 PF00210 Ferritin-like domain IN878_RS04865 PF10678 Protein of unknown function (DUF2492) IN878_RS04870 PF03222 Tryptophan/tyrosine permease family IN878_RS04875 PF03695 Uncharacterised protein family (UPF0149) IN878_RS04875 PF02810 SEC-C motif IN878_RS04895 PF01066 CDP-alcohol phosphatidyltransferase IN878_RS04900 PF01541 GIY-YIG catalytic domain IN878_RS04900 PF02151 UvrB/uvrC motif IN878_RS04900 PF08459 UvrC Helix-hairpin-helix N-terminal IN878_RS04905 PF00072 Response regulator receiver domain IN878_RS04905 PF00196 Bacterial regulatory proteins, luxR family IN878_RS04915 PF10769 Protein of unknown function (DUF2594) IN878_RS04920 PF00196 Bacterial regulatory proteins, luxR family IN878_RS04920 PF03472 Autoinducer binding domain IN878_RS04925 PF00005 ABC transporter IN878_RS04930 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS04935 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS04940 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS04945 PF02899 Phage integrase, N-terminal SAM-like domain IN878_RS04950 PF04542 Sigma-70 region 2 IN878_RS04950 PF04545 Sigma-70, region 4 IN878_RS04950 PF04539 Sigma-70 region 3 IN878_RS04955 PF00700 Bacterial flagellin C-terminal helical region IN878_RS04955 PF08884 Flagellin D3 domain IN878_RS04955 PF00669 Bacterial flagellin N-terminal helical region IN878_RS04960 PF07196 Flagellin hook IN motif IN878_RS04960 PF07195 Flagellar hook-associated protein 2 C-terminus IN878_RS04960 PF02465 Flagellar hook-associated protein 2 N-terminus IN878_RS04965 PF02561 Flagellar protein FliS IN878_RS04970 PF05400 Flagellar protein FliT IN878_RS04975 PF00128 Alpha amylase, catalytic domain IN878_RS04975 PF02806 Alpha amylase, C-terminal all-beta domain IN878_RS04980 PF13987 YedD-like protein IN878_RS04985 PF04143 Sulphur transport IN878_RS04990 PF01206 Sulfurtransferase TusA IN878_RS04995 PF02586 SOS response associated peptidase (SRAP) IN878_RS05005 PF01797 Transposase IS200 like IN878_RS05010 PF12833 Helix-turn-helix domain IN878_RS05015 PF01161 Phosphatidylethanolamine-binding protein IN878_RS05020 PF00893 Small Multidrug Resistance protein IN878_RS05025 PF02049 Flagellar hook-basal body complex protein FliE IN878_RS05030 PF08345 Flagellar M-ring protein C-terminal IN878_RS05030 PF01514 Secretory protein of YscJ/FliF family IN878_RS05035 PF14842 FliG N-terminal domain IN878_RS05035 PF01706 FliG C-terminal domain IN878_RS05035 PF14841 FliG middle domain IN878_RS05040 PF02108 Flagellar assembly protein FliH IN878_RS05045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IN878_RS05045 PF18269 T3SS EscN ATPase C-terminal domain IN878_RS05050 PF02050 Flagellar FliJ protein IN878_RS05055 PF02120 Flagellar hook-length control protein FliK IN878_RS05060 PF03748 Flagellar basal body-associated protein FliL IN878_RS05065 PF02154 Flagellar motor switch protein FliM IN878_RS05065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IN878_RS05070 PF16973 Flagellar motor switch protein FliN N-terminal IN878_RS05070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IN878_RS05075 PF04347 Flagellar biosynthesis protein, FliO IN878_RS05080 PF00813 FliP family IN878_RS05085 PF01313 Bacterial export proteins, family 3 IN878_RS05090 PF01311 Bacterial export proteins, family 1 IN878_RS05095 PF00196 Bacterial regulatory proteins, luxR family IN878_RS05100 PF10781 Dextransucrase DSRB IN878_RS05105 PF10733 Protein of unknown function (DUF2525) IN878_RS05120 PF09926 Uncharacterized small protein (DUF2158) IN878_RS05125 PF05661 Protein of unknown function (DUF808) IN878_RS05130 PF00892 EamA-like transporter family IN878_RS05135 PF03852 DNA mismatch endonuclease Vsr IN878_RS05140 PF00145 C-5 cytosine-specific DNA methylase IN878_RS05140 PF18284 DNA methylase N-terminal domain IN878_RS05165 PF00665 Integrase core domain IN878_RS05165 PF13936 Helix-turn-helix domain IN878_RS05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS05180 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS05185 PF00486 Transcriptional regulatory protein, C terminal IN878_RS05185 PF00072 Response regulator receiver domain IN878_RS05190 PF00576 HIUase/Transthyretin family IN878_RS05195 PF00174 Oxidoreductase molybdopterin binding domain IN878_RS05200 PF01794 Ferric reductase like transmembrane component IN878_RS05205 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment IN878_RS05210 PF01292 Prokaryotic cytochrome b561 IN878_RS05220 PF06167 Glucose-regulated metallo-peptidase M90 IN878_RS05240 PF07690 Major Facilitator Superfamily IN878_RS05240 PF00083 Sugar (and other) transporter IN878_RS05245 PF01048 Phosphorylase superfamily IN878_RS05245 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus IN878_RS05250 PF01709 Transcriptional regulator IN878_RS05260 PF01554 MatE IN878_RS05270 PF03466 LysR substrate binding domain IN878_RS05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS05275 PF03466 LysR substrate binding domain IN878_RS05285 PF17969 L,D-transpeptidase C-terminal domain IN878_RS05285 PF03734 L,D-transpeptidase catalytic domain IN878_RS05290 PF02277 Phosphoribosyltransferase IN878_RS05295 PF02654 Cobalamin-5-phosphate synthase IN878_RS05300 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IN878_RS05310 PF00294 pfkB family carbohydrate kinase IN878_RS05330 PF02126 Phosphotriesterase family IN878_RS05360 PF13990 YjcZ-like protein IN878_RS05380 PF06067 Domain of unknown function (DUF932) IN878_RS05385 PF03230 Antirestriction protein IN878_RS05390 PF04002 RadC-like JAB domain IN878_RS05395 PF06174 Protein of unknown function (DUF987) IN878_RS05400 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A IN878_RS05420 PF03050 Transposase IS66 family IN878_RS05420 PF13817 IS66 C-terminal element IN878_RS05420 PF13005 zinc-finger binding domain of transposase IS66 IN878_RS05420 PF13007 Transposase C of IS166 homeodomain IN878_RS05425 PF10662 Ethanolamine utilisation - propanediol utilisation IN878_RS05430 PF04363 Protein of unknown function (DUF496) IN878_RS05440 PF06445 GyrI-like small molecule binding domain IN878_RS05445 PF07943 Penicillin-binding protein 5, C-terminal domain IN878_RS05445 PF00768 D-alanyl-D-alanine carboxypeptidase IN878_RS05450 PF08411 Exonuclease C-terminal IN878_RS05450 PF00929 Exonuclease IN878_RS05455 PF01206 Sulfurtransferase TusA IN878_RS05465 PF13520 Amino acid permease IN878_RS05475 PF03466 LysR substrate binding domain IN878_RS05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS05480 PF01370 NAD dependent epimerase/dehydratase family IN878_RS05485 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IN878_RS05490 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IN878_RS05500 PF08029 HisG, C-terminal domain IN878_RS05500 PF01634 ATP phosphoribosyltransferase IN878_RS05505 PF00815 Histidinol dehydrogenase IN878_RS05510 PF00155 Aminotransferase class I and II IN878_RS05515 PF00475 Imidazoleglycerol-phosphate dehydratase IN878_RS05515 PF08645 Polynucleotide kinase 3 phosphatase IN878_RS05520 PF00117 Glutamine amidotransferase class-I IN878_RS05525 PF00977 Histidine biosynthesis protein IN878_RS05530 PF00977 Histidine biosynthesis protein IN878_RS05535 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IN878_RS05535 PF01502 Phosphoribosyl-AMP cyclohydrolase IN878_RS05540 PF02706 Chain length determinant protein IN878_RS05545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IN878_RS05545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IN878_RS05545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IN878_RS05550 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IN878_RS05550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IN878_RS05560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IN878_RS05560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IN878_RS05560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IN878_RS05560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IN878_RS05565 PF00483 Nucleotidyl transferase IN878_RS05565 PF01050 Mannose-6-phosphate isomerase IN878_RS05570 PF01370 NAD dependent epimerase/dehydratase family IN878_RS05575 PF16363 GDP-mannose 4,6 dehydratase IN878_RS05585 PF00535 Glycosyl transferase family 2 IN878_RS05590 PF01531 Glycosyl transferase family 11 IN878_RS05605 PF00483 Nucleotidyl transferase IN878_RS05615 PF00534 Glycosyl transferases group 1 IN878_RS05615 PF13439 Glycosyltransferase Family 4 IN878_RS05620 PF04230 Polysaccharide pyruvyl transferase IN878_RS05630 PF02397 Bacterial sugar transferase IN878_RS05635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IN878_RS05635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IN878_RS05635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IN878_RS05635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IN878_RS05640 PF00483 Nucleotidyl transferase IN878_RS05640 PF01050 Mannose-6-phosphate isomerase IN878_RS05645 PF00534 Glycosyl transferases group 1 IN878_RS05645 PF13579 Glycosyl transferase 4-like domain IN878_RS05650 PF00293 NUDIX domain IN878_RS05655 PF01370 NAD dependent epimerase/dehydratase family IN878_RS05660 PF16363 GDP-mannose 4,6 dehydratase IN878_RS05665 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS05670 PF00535 Glycosyl transferase family 2 IN878_RS05680 PF00534 Glycosyl transferases group 1 IN878_RS05680 PF13439 Glycosyltransferase Family 4 IN878_RS05685 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS05690 PF00535 Glycosyl transferase family 2 IN878_RS05695 PF13614 AAA domain IN878_RS05695 PF13807 G-rich domain on putative tyrosine kinase IN878_RS05695 PF02706 Chain length determinant protein IN878_RS05700 PF01451 Low molecular weight phosphotyrosine protein phosphatase IN878_RS05705 PF10531 SLBB domain IN878_RS05705 PF02563 Polysaccharide biosynthesis/export protein IN878_RS05705 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IN878_RS05715 PF00571 CBS domain IN878_RS05715 PF03741 Integral membrane protein TerC family IN878_RS05715 PF03471 Transporter associated domain IN878_RS05720 PF05170 AsmA family IN878_RS05725 PF00692 dUTPase IN878_RS05730 PF00485 Phosphoribulokinase / Uridine kinase family IN878_RS05735 PF05231 MASE1 IN878_RS05735 PF00563 EAL domain IN878_RS05735 PF08447 PAS fold IN878_RS05735 PF13426 PAS domain IN878_RS05735 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS05735 PF08448 PAS fold IN878_RS05740 PF00730 HhH-GPD superfamily base excision DNA repair protein IN878_RS05740 PF06029 AlkA N-terminal domain IN878_RS05745 PF00012 Hsp70 protein IN878_RS05755 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) IN878_RS05765 PF00092 von Willebrand factor type A domain IN878_RS05785 PF13533 Biotin-lipoyl like IN878_RS05790 PF00873 AcrB/AcrD/AcrF family IN878_RS05795 PF00873 AcrB/AcrD/AcrF family IN878_RS05800 PF07690 Major Facilitator Superfamily IN878_RS05805 PF00672 HAMP domain IN878_RS05805 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS05810 PF00486 Transcriptional regulatory protein, C terminal IN878_RS05810 PF00072 Response regulator receiver domain IN878_RS05815 PF07411 Domain of unknown function (DUF1508) IN878_RS05820 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH IN878_RS05830 PF01136 Peptidase family U32 IN878_RS05830 PF16325 Peptidase family U32 C-terminal domain IN878_RS05835 PF04606 Ogr/Delta-like zinc finger IN878_RS05880 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IN878_RS05885 PF07484 Phage Tail Collar Domain IN878_RS05885 PF03335 Phage tail fibre repeat IN878_RS05885 PF08400 Prophage tail fibre N-terminal IN878_RS06000 PF05840 Bacteriophage replication gene A protein (GPA) IN878_RS06045 PF02899 Phage integrase, N-terminal SAM-like domain IN878_RS06045 PF00589 Phage integrase family IN878_RS06055 PF00781 Diacylglycerol kinase catalytic domain IN878_RS06060 PF08220 DeoR-like helix-turn-helix domain IN878_RS06065 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS06065 PF00107 Zinc-binding dehydrogenase IN878_RS06070 PF03611 PTS system sugar-specific permease component IN878_RS06075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS06080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS06085 PF08013 Tagatose 6 phosphate kinase IN878_RS06090 PF01116 Fructose-bisphosphate aldolase class-II IN878_RS06095 PF01791 DeoC/LacD family aldolase IN878_RS06100 PF03825 Nucleoside H+ symporter IN878_RS06105 PF03747 ADP-ribosylglycohydrolase IN878_RS06110 PF00294 pfkB family carbohydrate kinase IN878_RS06115 PF07702 UTRA domain IN878_RS06115 PF00392 Bacterial regulatory proteins, gntR family IN878_RS06120 PF01183 Glycosyl hydrolases family 25 IN878_RS06125 PF08543 Phosphomethylpyrimidine kinase IN878_RS06130 PF02110 Hydroxyethylthiazole kinase family IN878_RS06135 PF02583 Metal-sensitive transcriptional repressor IN878_RS06140 PF03824 High-affinity nickel-transport protein IN878_RS06145 PF11776 Nickel/cobalt transporter regulator IN878_RS06150 PF00419 Fimbrial protein IN878_RS06155 PF00577 Outer membrane usher protein IN878_RS06155 PF13953 PapC C-terminal domain IN878_RS06155 PF13954 PapC N-terminal domain IN878_RS06160 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS06160 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS06165 PF00419 Fimbrial protein IN878_RS06170 PF10836 Protein of unknown function (DUF2574) IN878_RS06175 PF10609 NUBPL iron-transfer P-loop NTPase IN878_RS06180 PF01588 Putative tRNA binding domain IN878_RS06180 PF09334 tRNA synthetases class I (M) IN878_RS06185 PF13569 Domain of unknown function (DUF4132) IN878_RS06190 PF13569 Domain of unknown function (DUF4132) IN878_RS06200 PF07728 AAA domain (dynein-related subfamily) IN878_RS06210 PF05762 VWA domain containing CoxE-like protein IN878_RS06215 PF04434 SWIM zinc finger IN878_RS06220 PF06998 Protein of unknown function (DUF1307) IN878_RS06225 PF07308 Protein of unknown function (DUF1456) IN878_RS06230 PF04397 LytTr DNA-binding domain IN878_RS06230 PF00072 Response regulator receiver domain IN878_RS06235 PF06580 Histidine kinase IN878_RS06235 PF07694 5TMR of 5TMR-LYT IN878_RS06240 PF13411 MerR HTH family regulatory protein IN878_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS06255 PF00005 ABC transporter IN878_RS06260 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS06265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IN878_RS06270 PF00933 Glycosyl hydrolase family 3 N terminal domain IN878_RS06270 PF01915 Glycosyl hydrolase family 3 C-terminal domain IN878_RS06270 PF14310 Fibronectin type III-like domain IN878_RS06275 PF01565 FAD binding domain IN878_RS06275 PF09330 D-lactate dehydrogenase, membrane binding IN878_RS06280 PF00768 D-alanyl-D-alanine carboxypeptidase IN878_RS06285 PF04893 Yip1 domain IN878_RS06290 PF09335 SNARE associated Golgi protein IN878_RS06300 PF02321 Outer membrane efflux protein IN878_RS06310 PF01207 Dihydrouridine synthase (Dus) IN878_RS06315 PF03788 LrgA family IN878_RS06320 PF04172 LrgB-like family IN878_RS06325 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IN878_RS06325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IN878_RS06330 PF02698 DUF218 domain IN878_RS06335 PF10808 Protein of unknown function (DUF2542) IN878_RS06340 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS06340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IN878_RS06345 PF01180 Dihydroorotate dehydrogenase IN878_RS06350 PF02653 Branched-chain amino acid transport system / permease component IN878_RS06355 PF00005 ABC transporter IN878_RS06360 PF13407 Periplasmic binding protein domain IN878_RS06365 PF00356 Bacterial regulatory proteins, lacI family IN878_RS06370 PF04235 Protein of unknown function (DUF418) IN878_RS06375 PF01227 GTP cyclohydrolase I IN878_RS06380 PF00756 Putative esterase IN878_RS06385 PF00593 TonB dependent receptor IN878_RS06385 PF07715 TonB-dependent Receptor Plug Domain IN878_RS06390 PF00324 Amino acid permease IN878_RS06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS06395 PF03466 LysR substrate binding domain IN878_RS06400 PF03601 Conserved hypothetical protein 698 IN878_RS06405 PF01261 Xylose isomerase-like TIM barrel IN878_RS06410 PF00294 pfkB family carbohydrate kinase IN878_RS06415 PF01773 Na+ dependent nucleoside transporter N-terminus IN878_RS06415 PF07662 Na+ dependent nucleoside transporter C-terminus IN878_RS06420 PF01156 Inosine-uridine preferring nucleoside hydrolase IN878_RS06425 PF00027 Cyclic nucleotide-binding domain IN878_RS06430 PF07662 Na+ dependent nucleoside transporter C-terminus IN878_RS06430 PF01773 Na+ dependent nucleoside transporter N-terminus IN878_RS06435 PF04227 Indigoidine synthase A like protein IN878_RS06440 PF00294 pfkB family carbohydrate kinase IN878_RS06445 PF02378 Phosphotransferase system, EIIC IN878_RS06445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS06450 PF00294 pfkB family carbohydrate kinase IN878_RS06455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS06455 PF00381 PTS HPr component phosphorylation site IN878_RS06460 PF07690 Major Facilitator Superfamily IN878_RS06465 PF03692 Putative zinc- or iron-chelating domain IN878_RS06470 PF01132 Elongation factor P (EF-P) OB domain IN878_RS06470 PF08207 Elongation factor P (EF-P) KOW-like domain IN878_RS06470 PF09285 Elongation factor P, C-terminal IN878_RS06475 PF01232 Mannitol dehydrogenase Rossmann domain IN878_RS06475 PF08125 Mannitol dehydrogenase C-terminal domain IN878_RS06480 PF07683 Cobalamin synthesis protein cobW C-terminal domain IN878_RS06480 PF02492 CobW/HypB/UreG, nucleotide-binding domain IN878_RS06485 PF01569 PAP2 superfamily IN878_RS06490 PF00877 NlpC/P60 family IN878_RS06495 PF12792 CSS motif domain associated with EAL IN878_RS06495 PF00563 EAL domain IN878_RS06500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS06505 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS06510 PF12911 N-terminal TM domain of oligopeptide transport permease C IN878_RS06510 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS06515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS06515 PF00005 ABC transporter IN878_RS06520 PF13989 YejG-like protein IN878_RS06525 PF07690 Major Facilitator Superfamily IN878_RS06530 PF00849 RNA pseudouridylate synthase IN878_RS06530 PF01479 S4 domain IN878_RS06535 PF04851 Type III restriction enzyme, res subunit IN878_RS06535 PF00271 Helicase conserved C-terminal domain IN878_RS06540 PF01386 Ribosomal L25p family IN878_RS06545 PF04245 37-kD nucleoid-associated bacterial protein IN878_RS06550 PF07208 Protein of unknown function (DUF1414) IN878_RS06555 PF11893 Domain of unknown function (DUF3413) IN878_RS06555 PF00884 Sulfatase IN878_RS06565 PF16168 Adhesin of bacterial autotransporter system, probable stalk IN878_RS06565 PF03212 Pertactin IN878_RS06565 PF03797 Autotransporter beta-domain IN878_RS06570 PF00196 Bacterial regulatory proteins, luxR family IN878_RS06570 PF00072 Response regulator receiver domain IN878_RS06575 PF03918 Cytochrome C biogenesis protein IN878_RS06580 PF08534 Redoxin IN878_RS06585 PF01578 Cytochrome C assembly protein IN878_RS06585 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IN878_RS06590 PF03100 CcmE IN878_RS06595 PF04995 Heme exporter protein D (CcmD) IN878_RS06600 PF01578 Cytochrome C assembly protein IN878_RS06605 PF03379 CcmB protein IN878_RS06610 PF00005 ABC transporter IN878_RS06615 PF03264 NapC/NirT cytochrome c family, N-terminal region IN878_RS06620 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IN878_RS06625 PF12801 4Fe-4S binding domain IN878_RS06625 PF13237 4Fe-4S dicluster domain IN878_RS06630 PF12800 4Fe-4S binding domain IN878_RS06630 PF12838 4Fe-4S dicluster domain IN878_RS06635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IN878_RS06635 PF01568 Molydopterin dinucleotide binding domain IN878_RS06635 PF00384 Molybdopterin oxidoreductase IN878_RS06640 PF03927 NapD protein IN878_RS06645 PF13187 4Fe-4S dicluster domain IN878_RS06645 PF12800 4Fe-4S binding domain IN878_RS06645 PF00037 4Fe-4S binding domain IN878_RS06655 PF03974 Ecotin IN878_RS06660 PF06039 Malate:quinone oxidoreductase (Mqo) IN878_RS06665 PF00005 ABC transporter IN878_RS06670 PF13532 2OG-Fe(II) oxygenase superfamily IN878_RS06675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IN878_RS06675 PF12833 Helix-turn-helix domain IN878_RS06675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IN878_RS06675 PF02805 Metal binding domain of Ada IN878_RS06680 PF02424 ApbE family IN878_RS06685 PF00267 Gram-negative porin IN878_RS06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS06690 PF01627 Hpt domain IN878_RS06690 PF16359 RcsD-ABL domain IN878_RS06695 PF00072 Response regulator receiver domain IN878_RS06695 PF00196 Bacterial regulatory proteins, luxR family IN878_RS06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS06700 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS06700 PF00072 Response regulator receiver domain IN878_RS06700 PF09456 RcsC Alpha-Beta-Loop (ABL) IN878_RS06705 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS06705 PF00989 PAS fold IN878_RS06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS06710 PF02954 Bacterial regulatory protein, Fis family IN878_RS06710 PF00072 Response regulator receiver domain IN878_RS06710 PF00158 Sigma-54 interaction domain IN878_RS06715 PF01144 Coenzyme A transferase IN878_RS06720 PF01144 Coenzyme A transferase IN878_RS06725 PF02667 Short chain fatty acid transporter IN878_RS06730 PF02803 Thiolase, C-terminal domain IN878_RS06730 PF00108 Thiolase, N-terminal domain IN878_RS06735 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) IN878_RS06740 PF08486 Stage II sporulation protein IN878_RS06740 PF10062 Predicted secreted protein (DUF2300) IN878_RS06745 PF00207 Alpha-2-macroglobulin family IN878_RS06745 PF01835 MG2 domain IN878_RS06745 PF07703 Alpha-2-macroglobulin bait region domain IN878_RS06750 PF06672 Protein of unknown function (DUF1175) IN878_RS06755 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) IN878_RS06760 PF03989 DNA gyrase C-terminal domain, beta-propeller IN878_RS06760 PF00521 DNA gyrase/topoisomerase IV, subunit A IN878_RS06770 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat IN878_RS06770 PF03797 Autotransporter beta-domain IN878_RS06770 PF12951 Passenger-associated-transport-repeat IN878_RS06775 PF00317 Ribonucleotide reductase, all-alpha domain IN878_RS06775 PF02867 Ribonucleotide reductase, barrel domain IN878_RS06775 PF03477 ATP cone domain IN878_RS06780 PF00268 Ribonucleotide reductase, small chain IN878_RS06785 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS06800 PF03009 Glycerophosphoryl diester phosphodiesterase family IN878_RS06805 PF07690 Major Facilitator Superfamily IN878_RS06810 PF04324 BFD-like [2Fe-2S] binding domain IN878_RS06810 PF01266 FAD dependent oxidoreductase IN878_RS06815 PF00890 FAD binding domain IN878_RS06820 PF13183 4Fe-4S dicluster domain IN878_RS06820 PF02754 Cysteine-rich domain IN878_RS06825 PF04754 Putative transposase, YhgA-like IN878_RS06835 PF03328 HpcH/HpaI aldolase/citrate lyase family IN878_RS06840 PF07690 Major Facilitator Superfamily IN878_RS06845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IN878_RS06845 PF13378 Enolase C-terminal domain-like IN878_RS06850 PF01614 Bacterial transcriptional regulator IN878_RS06850 PF09339 IclR helix-turn-helix domain IN878_RS06855 PF00994 Probable molybdopterin binding domain IN878_RS06860 PF07437 YfaZ precursor IN878_RS06865 PF00293 NUDIX domain IN878_RS06870 PF00300 Histidine phosphatase superfamily (branch 1) IN878_RS06875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IN878_RS06880 PF00535 Glycosyl transferase family 2 IN878_RS06885 PF01370 NAD dependent epimerase/dehydratase family IN878_RS06885 PF02911 Formyl transferase, C-terminal domain IN878_RS06885 PF00551 Formyl transferase IN878_RS06890 PF01522 Polysaccharide deacetylase IN878_RS06895 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IN878_RS06900 PF00892 EamA-like transporter family IN878_RS06915 PF00501 AMP-binding enzyme IN878_RS06915 PF13193 AMP-binding enzyme C-terminal domain IN878_RS06920 PF13378 Enolase C-terminal domain-like IN878_RS06925 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS06930 PF12697 Alpha/beta hydrolase family IN878_RS06935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IN878_RS06935 PF16582 Middle domain of thiamine pyrophosphate IN878_RS06935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS06940 PF00425 chorismate binding enzyme IN878_RS06945 PF05957 Bacterial protein of unknown function (DUF883) IN878_RS06950 PF13673 Acetyltransferase (GNAT) domain IN878_RS06955 PF12706 Beta-lactamase superfamily domain IN878_RS06960 PF02902 Ulp1 protease family, C-terminal catalytic domain IN878_RS06965 PF00092 von Willebrand factor type A domain IN878_RS06965 PF12034 Domain of unknown function (DUF3520) IN878_RS06965 PF12450 von Willebrand factor IN878_RS06970 PF04389 Peptidase family M28 IN878_RS06975 PF08974 Domain of unknown function (DUF1877) IN878_RS06995 PF00361 Proton-conducting membrane transporter IN878_RS07000 PF00361 Proton-conducting membrane transporter IN878_RS07005 PF00361 Proton-conducting membrane transporter IN878_RS07005 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IN878_RS07010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IN878_RS07015 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IN878_RS07020 PF12838 4Fe-4S dicluster domain IN878_RS07025 PF00146 NADH dehydrogenase IN878_RS07030 PF00384 Molybdopterin oxidoreductase IN878_RS07030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IN878_RS07030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IN878_RS07030 PF01568 Molydopterin dinucleotide binding domain IN878_RS07035 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IN878_RS07035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IN878_RS07035 PF10531 SLBB domain IN878_RS07045 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IN878_RS07045 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IN878_RS07050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IN878_RS07055 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IN878_RS07060 PF03466 LysR substrate binding domain IN878_RS07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS07065 PF00155 Aminotransferase class I and II IN878_RS07075 PF02080 TrkA-C domain IN878_RS07075 PF03600 Citrate transporter IN878_RS07080 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS07085 PF03887 YfbU domain IN878_RS07090 PF04217 Protein of unknown function, DUF412 IN878_RS07095 PF00871 Acetokinase family IN878_RS07100 PF01515 Phosphate acetyl/butaryl transferase IN878_RS07100 PF07085 DRTGG domain IN878_RS07105 PF03606 C4-dicarboxylate anaerobic carrier IN878_RS07110 PF00293 NUDIX domain IN878_RS07115 PF12850 Calcineurin-like phosphoesterase superfamily domain IN878_RS07120 PF02798 Glutathione S-transferase, N-terminal domain IN878_RS07120 PF14834 Glutathione S-transferase, C-terminal domain IN878_RS07125 PF02798 Glutathione S-transferase, N-terminal domain IN878_RS07125 PF00043 Glutathione S-transferase, C-terminal domain IN878_RS07130 PF02152 Dihydroneopterin aldolase IN878_RS07135 PF01370 NAD dependent epimerase/dehydratase family IN878_RS07135 PF08338 Domain of unknown function (DUF1731) IN878_RS07140 PF04754 Putative transposase, YhgA-like IN878_RS07145 PF00005 ABC transporter IN878_RS07150 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS07155 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS07160 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS07165 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS07170 PF02441 Flavoprotein IN878_RS07175 PF00156 Phosphoribosyl transferase domain IN878_RS07180 PF02674 Colicin V production protein IN878_RS07185 PF05036 Sporulation related domain IN878_RS07190 PF02875 Mur ligase family, glutamate ligase domain IN878_RS07190 PF08245 Mur ligase middle domain IN878_RS07195 PF17848 Acetyl-coA carboxylase zinc finger domain IN878_RS07195 PF01039 Carboxyl transferase domain IN878_RS07200 PF09335 SNARE associated Golgi protein IN878_RS07205 PF01416 tRNA pseudouridine synthase IN878_RS07210 PF02774 Semialdehyde dehydrogenase, dimerisation domain IN878_RS07210 PF01118 Semialdehyde dehydrogenase, NAD binding domain IN878_RS07215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IN878_RS07215 PF11890 Domain of unknown function (DUF3410) IN878_RS07215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IN878_RS07225 PF07690 Major Facilitator Superfamily IN878_RS07230 PF02801 Beta-ketoacyl synthase, C-terminal domain IN878_RS07230 PF00109 Beta-ketoacyl synthase, N-terminal domain IN878_RS07235 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IN878_RS07235 PF01266 FAD dependent oxidoreductase IN878_RS07240 PF08891 YfcL protein IN878_RS07245 PF04315 Elongation factor P hydroxylase IN878_RS07250 PF01925 Sulfite exporter TauE/SafE IN878_RS07255 PF03411 Penicillin-insensitive murein endopeptidase IN878_RS07260 PF01264 Chorismate synthase IN878_RS07265 PF05175 Methyltransferase small domain IN878_RS07270 PF01713 Smr domain IN878_RS07275 PF11245 Protein of unknown function (DUF2544) IN878_RS07280 PF00419 Fimbrial protein IN878_RS07285 PF00419 Fimbrial protein IN878_RS07290 PF00419 Fimbrial protein IN878_RS07295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS07295 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS07300 PF00577 Outer membrane usher protein IN878_RS07300 PF13954 PapC N-terminal domain IN878_RS07300 PF13953 PapC C-terminal domain IN878_RS07305 PF00419 Fimbrial protein IN878_RS07310 PF00300 Histidine phosphatase superfamily (branch 1) IN878_RS07315 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS07315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IN878_RS07315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IN878_RS07320 PF02803 Thiolase, C-terminal domain IN878_RS07320 PF00108 Thiolase, N-terminal domain IN878_RS07325 PF04175 Protein of unknown function (DUF406) IN878_RS07330 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IN878_RS07340 PF04333 MlaA lipoprotein IN878_RS07345 PF01226 Formate/nitrite transporter IN878_RS07355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS07355 PF03466 LysR substrate binding domain IN878_RS07360 PF02447 GntP family permease IN878_RS07365 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS07370 PF07690 Major Facilitator Superfamily IN878_RS07375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS07375 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS07380 PF00196 Bacterial regulatory proteins, luxR family IN878_RS07380 PF00072 Response regulator receiver domain IN878_RS07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS07385 PF00072 Response regulator receiver domain IN878_RS07385 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS07385 PF01627 Hpt domain IN878_RS07390 PF02515 CoA-transferase family III IN878_RS07395 PF03547 Membrane transport protein IN878_RS07400 PF00205 Thiamine pyrophosphate enzyme, central domain IN878_RS07400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IN878_RS07400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS07405 PF02515 CoA-transferase family III IN878_RS07410 PF10938 YfdX protein IN878_RS07420 PF10810 Protein of unknown function (DUF2545) IN878_RS07425 PF03279 Bacterial lipid A biosynthesis acyltransferase IN878_RS07435 PF00155 Aminotransferase class I and II IN878_RS07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS07440 PF07694 5TMR of 5TMR-LYT IN878_RS07440 PF06580 Histidine kinase IN878_RS07445 PF00072 Response regulator receiver domain IN878_RS07445 PF04397 LytTr DNA-binding domain IN878_RS07450 PF12833 Helix-turn-helix domain IN878_RS07455 PF00381 PTS HPr component phosphorylation site IN878_RS07455 PF05524 PEP-utilising enzyme, N-terminal IN878_RS07455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS07455 PF00391 PEP-utilising enzyme, mobile domain IN878_RS07455 PF02896 PEP-utilising enzyme, TIM barrel domain IN878_RS07460 PF05343 M42 glutamyl aminopeptidase IN878_RS07465 PF00557 Metallopeptidase family M24 IN878_RS07465 PF01321 Creatinase/Prolidase N-terminal domain IN878_RS07470 PF02378 Phosphotransferase system, EIIC IN878_RS07475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS07480 PF02685 Glucokinase IN878_RS07485 PF00654 Voltage gated chloride channel IN878_RS07490 PF10697 Protein of unknown function (DUF2502) IN878_RS07495 PF01566 Natural resistance-associated macrophage protein IN878_RS07500 PF07662 Na+ dependent nucleoside transporter C-terminus IN878_RS07500 PF01773 Na+ dependent nucleoside transporter N-terminus IN878_RS07500 PF07670 Nucleoside recognition IN878_RS07505 PF00563 EAL domain IN878_RS07505 PF05231 MASE1 IN878_RS07520 PF07037 Putative transcription regulator (DUF1323) IN878_RS07525 PF07037 Putative transcription regulator (DUF1323) IN878_RS07530 PF00749 tRNA synthetases class I (E and Q), catalytic domain IN878_RS07560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS07560 PF03466 LysR substrate binding domain IN878_RS07570 PF03825 Nucleoside H+ symporter IN878_RS07575 PF01048 Phosphorylase superfamily IN878_RS07580 PF03502 Nucleoside-specific channel-forming protein, Tsx IN878_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS07585 PF03466 LysR substrate binding domain IN878_RS07590 PF13593 SBF-like CPA transporter family (DUF4137) IN878_RS07595 PF12843 Putative quorum-sensing-regulated virulence factor IN878_RS07600 PF00533 BRCA1 C Terminus (BRCT) domain IN878_RS07600 PF01653 NAD-dependent DNA ligase adenylation domain IN878_RS07600 PF12826 Helix-hairpin-helix motif IN878_RS07600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IN878_RS07600 PF03120 NAD-dependent DNA ligase OB-fold domain IN878_RS07605 PF04354 ZipA, C-terminal FtsZ-binding domain IN878_RS07615 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS07620 PF00381 PTS HPr component phosphorylation site IN878_RS07625 PF05524 PEP-utilising enzyme, N-terminal IN878_RS07625 PF02896 PEP-utilising enzyme, TIM barrel domain IN878_RS07625 PF00391 PEP-utilising enzyme, mobile domain IN878_RS07630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IN878_RS07635 PF08543 Phosphomethylpyrimidine kinase IN878_RS07640 PF17263 Family of unknown function (DUF5329) IN878_RS07645 PF05406 WGR domain IN878_RS07650 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS07655 PF00005 ABC transporter IN878_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS07680 PF01418 Helix-turn-helix domain, rpiR family IN878_RS07680 PF01380 SIS domain IN878_RS07685 PF01380 SIS domain IN878_RS07690 PF00367 phosphotransferase system, EIIB IN878_RS07690 PF02378 Phosphotransferase system, EIIC IN878_RS07695 PF00144 Beta-lactamase IN878_RS07700 PF04261 Dyp-type peroxidase family IN878_RS07705 PF06572 Protein of unknown function (DUF1131) IN878_RS07710 PF11143 Protein of unknown function (DUF2919) IN878_RS07715 PF00583 Acetyltransferase (GNAT) family IN878_RS07720 PF01520 N-acetylmuramoyl-L-alanine amidase IN878_RS07725 PF01218 Coproporphyrinogen III oxidase IN878_RS07730 PF12833 Helix-turn-helix domain IN878_RS07735 PF16365 Ethanolamine utilization protein EutK C-terminus IN878_RS07735 PF00936 BMC domain IN878_RS07740 PF00936 BMC domain IN878_RS07745 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IN878_RS07750 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IN878_RS07755 PF06277 Ethanolamine utilisation protein EutA IN878_RS07760 PF04346 Ethanolamine utilisation protein, EutH IN878_RS07765 PF00465 Iron-containing alcohol dehydrogenase IN878_RS07785 PF00171 Aldehyde dehydrogenase family IN878_RS07790 PF03319 Ethanolamine utilisation protein EutN/carboxysome IN878_RS07795 PF00936 BMC domain IN878_RS07800 PF01515 Phosphate acetyl/butaryl transferase IN878_RS07805 PF01923 Cobalamin adenosyltransferase IN878_RS07810 PF06249 Ethanolamine utilisation protein EutQ IN878_RS07815 PF10662 Ethanolamine utilisation - propanediol utilisation IN878_RS07820 PF00936 BMC domain IN878_RS07825 PF03949 Malic enzyme, NAD binding domain IN878_RS07825 PF00390 Malic enzyme, N-terminal domain IN878_RS07825 PF01515 Phosphate acetyl/butaryl transferase IN878_RS07830 PF00923 Transaldolase/Fructose-6-phosphate aldolase IN878_RS07835 PF00456 Transketolase, thiamine diphosphate binding domain IN878_RS07835 PF02780 Transketolase, C-terminal domain IN878_RS07835 PF02779 Transketolase, pyrimidine binding domain IN878_RS07840 PF06674 Protein of unknown function (DUF1176) IN878_RS07845 PF00293 NUDIX domain IN878_RS07850 PF13247 4Fe-4S dicluster domain IN878_RS07850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IN878_RS07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS07855 PF07730 Histidine kinase IN878_RS07855 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IN878_RS07855 PF00672 HAMP domain IN878_RS07860 PF00873 AcrB/AcrD/AcrF family IN878_RS07870 PF03960 ArsC family IN878_RS07875 PF01546 Peptidase family M20/M25/M40 IN878_RS07875 PF07687 Peptidase dimerisation domain IN878_RS07880 PF13980 Uncharacterised protein family (UPF0370) IN878_RS07885 PF02230 Phospholipase/Carboxylesterase IN878_RS07890 PF05127 Helicase IN878_RS07890 PF13718 GNAT acetyltransferase 2 IN878_RS07890 PF08351 Domain of unknown function (DUF1726) IN878_RS07890 PF17176 tRNA-binding domain IN878_RS07895 PF04228 Putative neutral zinc metallopeptidase IN878_RS07900 PF01259 SAICAR synthetase IN878_RS07905 PF06804 NlpB/DapX lipoprotein IN878_RS07910 PF00701 Dihydrodipicolinate synthetase family IN878_RS07915 PF01842 ACT domain IN878_RS07920 PF00578 AhpC/TSA family IN878_RS07925 PF00037 4Fe-4S binding domain IN878_RS07925 PF12798 4Fe-4S binding domain IN878_RS07930 PF00361 Proton-conducting membrane transporter IN878_RS07935 PF00146 NADH dehydrogenase IN878_RS07940 PF00361 Proton-conducting membrane transporter IN878_RS07940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IN878_RS07945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IN878_RS07950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IN878_RS07950 PF00361 Proton-conducting membrane transporter IN878_RS07955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IN878_RS07955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IN878_RS07955 PF00374 Nickel-dependent hydrogenase IN878_RS07960 PF12838 4Fe-4S dicluster domain IN878_RS07965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IN878_RS07970 PF07450 Formate hydrogenlyase maturation protein HycH IN878_RS07975 PF00158 Sigma-54 interaction domain IN878_RS07975 PF01590 GAF domain IN878_RS07980 PF01226 Formate/nitrite transporter IN878_RS07985 PF01594 AI-2E family transporter IN878_RS07990 PF01435 Peptidase family M48 IN878_RS07995 PF03960 ArsC family IN878_RS08000 PF00308 Bacterial dnaA protein IN878_RS08005 PF00860 Permease family IN878_RS08015 PF00586 AIR synthase related protein, N-terminal domain IN878_RS08015 PF02769 AIR synthase related protein, C-terminal domain IN878_RS08020 PF00551 Formyl transferase IN878_RS08025 PF13089 Polyphosphate kinase N-terminal domain IN878_RS08025 PF13090 Polyphosphate kinase C-terminal domain 2 IN878_RS08025 PF02503 Polyphosphate kinase middle domain IN878_RS08025 PF17941 Polyphosphate kinase C-terminal domain 1 IN878_RS08030 PF02541 Ppx/GppA phosphatase family IN878_RS08035 PF00563 EAL domain IN878_RS08035 PF05231 MASE1 IN878_RS08045 PF11119 Protein of unknown function (DUF2633) IN878_RS08060 PF17358 Family of unknown function (DUF5384) IN878_RS08065 PF02540 NAD synthase IN878_RS08065 PF00117 Glutamine amidotransferase class-I IN878_RS08065 PF00958 GMP synthase C terminal domain IN878_RS08070 PF00478 IMP dehydrogenase / GMP reductase domain IN878_RS08070 PF00571 CBS domain IN878_RS08075 PF13742 OB-fold nucleic acid binding domain IN878_RS08075 PF02601 Exonuclease VII, large subunit IN878_RS08080 PF07191 zinc-ribbons IN878_RS08085 PF01926 50S ribosome-binding GTPase IN878_RS08085 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IN878_RS08090 PF13360 PQQ-like domain IN878_RS08095 PF09976 Tetratricopeptide repeat-like domain IN878_RS08100 PF03129 Anticodon binding domain IN878_RS08100 PF13393 Histidyl-tRNA synthetase IN878_RS08105 PF04551 GcpE protein IN878_RS08110 PF13464 Domain of unknown function (DUF4115) IN878_RS08115 PF04055 Radical SAM superfamily IN878_RS08120 PF00334 Nucleoside diphosphate kinase IN878_RS08125 PF00912 Transglycosylase IN878_RS08125 PF00905 Penicillin binding protein transpeptidase domain IN878_RS08125 PF06832 Penicillin-Binding Protein C-terminus Family IN878_RS08130 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IN878_RS08130 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IN878_RS08130 PF00207 Alpha-2-macroglobulin family IN878_RS08130 PF17962 Bacterial macroglobulin domain 6 IN878_RS08130 PF01835 MG2 domain IN878_RS08130 PF07678 A-macroglobulin TED domain IN878_RS08130 PF07703 Alpha-2-macroglobulin bait region domain IN878_RS08130 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IN878_RS08130 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain IN878_RS08135 PF00581 Rhodanese-like domain IN878_RS08140 PF07179 SseB protein N-terminal domain IN878_RS08140 PF14581 SseB protein C-terminal domain IN878_RS08145 PF00883 Cytosol aminopeptidase family, catalytic domain IN878_RS08145 PF12404 Peptidase IN878_RS08150 PF04384 Iron-sulphur cluster assembly IN878_RS08155 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS08160 PF00012 Hsp70 protein IN878_RS08165 PF07743 HSCB C-terminal oligomerisation domain IN878_RS08170 PF01521 Iron-sulphur cluster biosynthesis IN878_RS08175 PF01592 NifU-like N terminal domain IN878_RS08180 PF00266 Aminotransferase class-V IN878_RS08185 PF02082 Transcriptional regulator IN878_RS08190 PF00588 SpoU rRNA Methylase family IN878_RS08195 PF00459 Inositol monophosphatase family IN878_RS08200 PF12146 Serine aminopeptidase, S33 IN878_RS08205 PF00874 PRD domain IN878_RS08210 PF12832 MFS_1 like family IN878_RS08215 PF03466 LysR substrate binding domain IN878_RS08215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS08220 PF00355 Rieske [2Fe-2S] domain IN878_RS08220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IN878_RS08225 PF00866 Ring hydroxylating beta subunit IN878_RS08230 PF00355 Rieske [2Fe-2S] domain IN878_RS08235 PF00106 short chain dehydrogenase IN878_RS08240 PF14759 Reductase C-terminal IN878_RS08240 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS08245 PF07681 DoxX IN878_RS08250 PF01263 Aldose 1-epimerase IN878_RS08255 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS08255 PF00107 Zinc-binding dehydrogenase IN878_RS08260 PF02653 Branched-chain amino acid transport system / permease component IN878_RS08265 PF00005 ABC transporter IN878_RS08270 PF13407 Periplasmic binding protein domain IN878_RS08285 PF00464 Serine hydroxymethyltransferase IN878_RS08290 PF00970 Oxidoreductase FAD-binding domain IN878_RS08290 PF00042 Globin IN878_RS08290 PF00175 Oxidoreductase NAD-binding domain IN878_RS08295 PF00543 Nitrogen regulatory protein P-II IN878_RS08300 PF00158 Sigma-54 interaction domain IN878_RS08300 PF00072 Response regulator receiver domain IN878_RS08305 PF13942 YfhG lipoprotein IN878_RS08310 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS08315 PF02769 AIR synthase related protein, C-terminal domain IN878_RS08315 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IN878_RS08315 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IN878_RS08320 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS08320 PF01464 Transglycosylase SLT domain IN878_RS08325 PF14437 MafB19-like deaminase IN878_RS08335 PF01418 Helix-turn-helix domain, rpiR family IN878_RS08335 PF01380 SIS domain IN878_RS08340 PF12838 4Fe-4S dicluster domain IN878_RS08350 PF01648 4'-phosphopantetheinyl transferase superfamily IN878_RS08355 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IN878_RS08360 PF11967 Recombination protein O N terminal IN878_RS08360 PF02565 Recombination protein O C terminal IN878_RS08365 PF07650 KH domain IN878_RS08365 PF01926 50S ribosome-binding GTPase IN878_RS08370 PF00035 Double-stranded RNA binding motif IN878_RS08370 PF14622 Ribonuclease-III-like IN878_RS08375 PF10502 Signal peptidase, peptidase S26 IN878_RS08380 PF00009 Elongation factor Tu GTP binding domain IN878_RS08380 PF00679 Elongation factor G C-terminus IN878_RS08380 PF03144 Elongation factor Tu domain 2 IN878_RS08380 PF06421 GTP-binding protein LepA C-terminus IN878_RS08390 PF17188 MucB/RseB C-terminal domain IN878_RS08390 PF03888 MucB/RseB N-terminal domain IN878_RS08395 PF03872 Anti sigma-E protein RseA, N-terminal domain IN878_RS08395 PF03873 Anti sigma-E protein RseA, C-terminal domain IN878_RS08400 PF08281 Sigma-70, region 4 IN878_RS08400 PF04542 Sigma-70 region 2 IN878_RS08410 PF00890 FAD binding domain IN878_RS08410 PF02910 Fumarate reductase flavoprotein C-term IN878_RS08415 PF05175 Methyltransferase small domain IN878_RS08420 PF00271 Helicase conserved C-terminal domain IN878_RS08420 PF00270 DEAD/DEAH box helicase IN878_RS08425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS08425 PF03466 LysR substrate binding domain IN878_RS08430 PF01810 LysE type translocator IN878_RS08435 PF01228 Glycine radical IN878_RS08440 PF03167 Uracil DNA glycosylase superfamily IN878_RS08445 PF00588 SpoU rRNA Methylase family IN878_RS08445 PF08032 RNA 2'-O ribose methyltransferase substrate binding IN878_RS08450 PF00085 Thioredoxin IN878_RS08455 PF03942 DTW domain IN878_RS08460 PF00583 Acetyltransferase (GNAT) family IN878_RS08460 PF13380 CoA binding domain IN878_RS08460 PF13607 Succinyl-CoA ligase like flavodoxin domain IN878_RS08465 PF13091 PLD-like domain IN878_RS08470 PF10043 Predicted periplasmic lipoprotein (DUF2279) IN878_RS08475 PF00083 Sugar (and other) transporter IN878_RS08500 PF00004 ATPase family associated with various cellular activities (AAA) IN878_RS08500 PF17871 AAA lid domain IN878_RS08500 PF02861 Clp amino terminal domain, pathogenicity island component IN878_RS08500 PF10431 C-terminal, D2-small domain, of ClpB protein IN878_RS08500 PF07724 AAA domain (Cdc48 subfamily) IN878_RS08505 PF02578 Multi-copper polyphenol oxidoreductase laccase IN878_RS08510 PF00849 RNA pseudouridylate synthase IN878_RS08510 PF01479 S4 domain IN878_RS08515 PF13525 Outer membrane lipoprotein IN878_RS08520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IN878_RS08530 PF00800 Prephenate dehydratase IN878_RS08530 PF01817 Chorismate mutase type II IN878_RS08535 PF01817 Chorismate mutase type II IN878_RS08535 PF02153 Prephenate dehydrogenase IN878_RS08540 PF00793 DAHP synthetase I family IN878_RS08545 PF10973 Protein of unknown function (DUF2799) IN878_RS08550 PF13689 YfiR/HmsC-like IN878_RS08555 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS08555 PF17152 Periplasmic sensor domain IN878_RS08560 PF00691 OmpA family IN878_RS08565 PF01245 Ribosomal protein L19 IN878_RS08570 PF01746 tRNA (Guanine-1)-methyltransferase IN878_RS08575 PF05239 PRC-barrel domain IN878_RS08575 PF01782 RimM N-terminal domain IN878_RS08580 PF00886 Ribosomal protein S16 IN878_RS08585 PF00448 SRP54-type protein, GTPase domain IN878_RS08585 PF02978 Signal peptide binding domain IN878_RS08585 PF02881 SRP54-type protein, helical bundle domain IN878_RS08590 PF01578 Cytochrome C assembly protein IN878_RS08595 PF01595 Cyclin M transmembrane N-terminal domain IN878_RS08595 PF03471 Transporter associated domain IN878_RS08595 PF00571 CBS domain IN878_RS08600 PF01025 GrpE IN878_RS08605 PF01513 ATP-NAD kinase IN878_RS08610 PF02463 RecF/RecN/SMC N terminal domain IN878_RS08615 PF04355 SmpA / OmlA family IN878_RS08620 PF03658 RnfH family Ubiquitin IN878_RS08625 PF03364 Polyketide cyclase / dehydrase and lipid transport IN878_RS08630 PF01668 SmpB protein IN878_RS08640 PF00589 Phage integrase family IN878_RS08640 PF13356 Arm DNA-binding domain IN878_RS08650 PF02195 ParB-like nuclease domain IN878_RS08650 PF17762 HTH domain found in ParB protein IN878_RS08710 PF03797 Autotransporter beta-domain IN878_RS08710 PF03212 Pertactin IN878_RS08710 PF16168 Adhesin of bacterial autotransporter system, probable stalk IN878_RS08740 PF08943 CsiD IN878_RS08745 PF01266 FAD dependent oxidoreductase IN878_RS08750 PF00171 Aldehyde dehydrogenase family IN878_RS08755 PF00202 Aminotransferase class-III IN878_RS08760 PF00324 Amino acid permease IN878_RS08765 PF07729 FCD domain IN878_RS08765 PF00392 Bacterial regulatory proteins, gntR family IN878_RS08770 PF04972 BON domain IN878_RS08770 PF01476 LysM domain IN878_RS08775 PF01679 Proteolipid membrane potential modulator IN878_RS08780 PF01022 Bacterial regulatory protein, arsR family IN878_RS08785 PF11127 Protein of unknown function (DUF2892) IN878_RS08785 PF00581 Rhodanese-like domain IN878_RS08790 PF00816 H-NS histone family IN878_RS08795 PF06610 L-alanine exporter IN878_RS08800 PF09400 Protein of unknown function (DUF2002) IN878_RS08805 PF05957 Bacterial protein of unknown function (DUF883) IN878_RS08810 PF00462 Glutaredoxin IN878_RS08815 PF07972 NrdI Flavodoxin like IN878_RS08820 PF02867 Ribonucleotide reductase, barrel domain IN878_RS08820 PF00317 Ribonucleotide reductase, all-alpha domain IN878_RS08820 PF08343 Ribonucleotide reductase N-terminal IN878_RS08825 PF00268 Ribonucleotide reductase, small chain IN878_RS08830 PF00571 CBS domain IN878_RS08830 PF00005 ABC transporter IN878_RS08835 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS08840 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IN878_RS08845 PF07690 Major Facilitator Superfamily IN878_RS08850 PF03591 AzlC protein IN878_RS08855 PF05437 Branched-chain amino acid transport protein (AzlD) IN878_RS08860 PF01047 MarR family IN878_RS08865 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS08865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS08870 PF07690 Major Facilitator Superfamily IN878_RS08875 PF02664 S-Ribosylhomocysteinase (LuxS) IN878_RS08880 PF04262 Glutamate-cysteine ligase IN878_RS08885 PF09335 SNARE associated Golgi protein IN878_RS08890 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS08925 PF02599 Global regulator protein family IN878_RS08930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IN878_RS08930 PF02272 DHHA1 domain IN878_RS08930 PF01411 tRNA synthetases class II (A) IN878_RS08935 PF02631 RecX family IN878_RS08940 PF00154 recA bacterial DNA recombination protein IN878_RS08945 PF02464 Competence-damaged protein IN878_RS08950 PF13406 Transglycosylase SLT domain IN878_RS08955 PF03608 PTS system enzyme II sorbitol-specific factor IN878_RS08960 PF07663 Sorbitol phosphotransferase enzyme II C-terminus IN878_RS08960 PF03612 Sorbitol phosphotransferase enzyme II N-terminus IN878_RS08965 PF03829 PTS system glucitol/sorbitol-specific IIA component IN878_RS08970 PF00106 short chain dehydrogenase IN878_RS08975 PF06923 Glucitol operon activator protein (GutM) IN878_RS08980 PF00455 DeoR C terminal sensor domain IN878_RS08980 PF08220 DeoR-like helix-turn-helix domain IN878_RS08985 PF00571 CBS domain IN878_RS08985 PF01380 SIS domain IN878_RS08990 PF00158 Sigma-54 interaction domain IN878_RS08990 PF01590 GAF domain IN878_RS08995 PF00301 Rubredoxin IN878_RS08995 PF00753 Metallo-beta-lactamase superfamily IN878_RS08995 PF00258 Flavodoxin IN878_RS09000 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS09000 PF18113 Rubredoxin binding C-terminal domain IN878_RS09005 PF00708 Acylphosphatase IN878_RS09005 PF07503 HypF finger IN878_RS09005 PF01300 Telomere recombination IN878_RS09005 PF17788 HypF Kae1-like domain IN878_RS09010 PF12800 4Fe-4S binding domain IN878_RS09010 PF13247 4Fe-4S dicluster domain IN878_RS09015 PF00356 Bacterial regulatory proteins, lacI family IN878_RS09020 PF02378 Phosphotransferase system, EIIC IN878_RS09020 PF00367 phosphotransferase system, EIIB IN878_RS09025 PF00232 Glycosyl hydrolase family 1 IN878_RS09030 PF01750 Hydrogenase maturation protease IN878_RS09035 PF07450 Formate hydrogenlyase maturation protein HycH IN878_RS09040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IN878_RS09045 PF12838 4Fe-4S dicluster domain IN878_RS09050 PF00374 Nickel-dependent hydrogenase IN878_RS09050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IN878_RS09050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IN878_RS09055 PF00146 NADH dehydrogenase IN878_RS09060 PF00361 Proton-conducting membrane transporter IN878_RS09065 PF13247 4Fe-4S dicluster domain IN878_RS09070 PF11046 Transcriptional repressor of hyc and hyp operons IN878_RS09075 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IN878_RS09080 PF02492 CobW/HypB/UreG, nucleotide-binding domain IN878_RS09085 PF01455 HupF/HypC family IN878_RS09090 PF01924 Hydrogenase formation hypA family IN878_RS09095 PF02769 AIR synthase related protein, C-terminal domain IN878_RS09095 PF00586 AIR synthase related protein, N-terminal domain IN878_RS09100 PF01590 GAF domain IN878_RS09100 PF00158 Sigma-54 interaction domain IN878_RS09105 PF11756 Nitrous oxide-stimulated promoter IN878_RS09115 PF05192 MutS domain III IN878_RS09115 PF00488 MutS domain V IN878_RS09115 PF01624 MutS domain I IN878_RS09115 PF05190 MutS family domain IV IN878_RS09115 PF05188 MutS domain II IN878_RS09120 PF00149 Calcineurin-like phosphoesterase IN878_RS09125 PF00455 DeoR C terminal sensor domain IN878_RS09125 PF08220 DeoR-like helix-turn-helix domain IN878_RS09130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IN878_RS09130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IN878_RS09135 PF17042 Nucleotide-binding C-terminal domain IN878_RS09135 PF07005 Sugar-binding N-terminal domain IN878_RS09140 PF00596 Class II Aldolase and Adducin N-terminal domain IN878_RS09145 PF01261 Xylose isomerase-like TIM barrel IN878_RS09150 PF02447 GntP family permease IN878_RS09155 PF04539 Sigma-70 region 3 IN878_RS09155 PF04545 Sigma-70, region 4 IN878_RS09155 PF00140 Sigma-70 factor, region 1.2 IN878_RS09155 PF04542 Sigma-70 region 2 IN878_RS09160 PF01476 LysM domain IN878_RS09160 PF01551 Peptidase family M23 IN878_RS09170 PF01975 Survival protein SurE IN878_RS09175 PF01142 tRNA pseudouridine synthase D (TruD) IN878_RS09180 PF02542 YgbB family IN878_RS09185 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IN878_RS09190 PF04977 Septum formation initiator IN878_RS09195 PF12084 Protein of unknown function (DUF3561) IN878_RS09205 PF00009 Elongation factor Tu GTP binding domain IN878_RS09210 PF01507 Phosphoadenosine phosphosulfate reductase family IN878_RS09215 PF04389 Peptidase family M28 IN878_RS09230 PF00271 Helicase conserved C-terminal domain IN878_RS09230 PF18019 HD domain IN878_RS09230 PF00270 DEAD/DEAH box helicase IN878_RS09235 PF01609 Transposase DDE domain IN878_RS09240 PF01848 Hok/gef family IN878_RS09245 PF01507 Phosphoadenosine phosphosulfate reductase family IN878_RS09250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IN878_RS09250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IN878_RS09255 PF00667 FAD binding domain IN878_RS09255 PF00258 Flavodoxin IN878_RS09255 PF00175 Oxidoreductase NAD-binding domain IN878_RS09260 PF01242 6-pyruvoyl tetrahydropterin synthase IN878_RS09265 PF01266 FAD dependent oxidoreductase IN878_RS09275 PF04309 Glycerol-3-phosphate responsive antiterminator IN878_RS09280 PF01012 Electron transfer flavoprotein domain IN878_RS09280 PF00766 Electron transfer flavoprotein FAD-binding domain IN878_RS09285 PF01012 Electron transfer flavoprotein domain IN878_RS09290 PF00083 Sugar (and other) transporter IN878_RS09295 PF01565 FAD binding domain IN878_RS09295 PF02913 FAD linked oxidases, C-terminal domain IN878_RS09305 PF07690 Major Facilitator Superfamily IN878_RS09310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IN878_RS09310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS09320 PF04055 Radical SAM superfamily IN878_RS09330 PF04536 TPM domain IN878_RS09335 PF00113 Enolase, C-terminal TIM barrel domain IN878_RS09335 PF03952 Enolase, N-terminal domain IN878_RS09340 PF06418 CTP synthase N-terminus IN878_RS09340 PF00117 Glutamine amidotransferase class-I IN878_RS09345 PF03819 MazG nucleotide pyrophosphohydrolase domain IN878_RS09350 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IN878_RS09355 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IN878_RS09360 PF13291 ACT domain IN878_RS09360 PF04607 Region found in RelA / SpoT proteins IN878_RS09360 PF02824 TGS domain IN878_RS09365 PF01938 TRAM domain IN878_RS09365 PF05958 tRNA (Uracil-5-)-methyltransferase IN878_RS09370 PF00072 Response regulator receiver domain IN878_RS09370 PF00672 HAMP domain IN878_RS09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS09370 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS09370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IN878_RS09370 PF01627 Hpt domain IN878_RS09375 PF13378 Enolase C-terminal domain-like IN878_RS09380 PF13378 Enolase C-terminal domain-like IN878_RS09380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IN878_RS09385 PF07690 Major Facilitator Superfamily IN878_RS09390 PF00258 Flavodoxin IN878_RS09395 PF00849 RNA pseudouridylate synthase IN878_RS09400 PF04287 tRNA pseudouridine synthase C IN878_RS09405 PF07348 Syd protein (SUKH-2) IN878_RS09410 PF14489 QueF-like protein IN878_RS09410 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IN878_RS09415 PF03641 Possible lysine decarboxylase IN878_RS09415 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IN878_RS09415 PF11892 Domain of unknown function (DUF3412) IN878_RS09425 PF03315 Serine dehydratase beta chain IN878_RS09425 PF03313 Serine dehydratase alpha chain IN878_RS09430 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IN878_RS09430 PF01367 5'-3' exonuclease, C-terminal SAM fold IN878_RS09435 PF00465 Iron-containing alcohol dehydrogenase IN878_RS09440 PF00596 Class II Aldolase and Adducin N-terminal domain IN878_RS09445 PF07690 Major Facilitator Superfamily IN878_RS09450 PF07882 L-fucose isomerase, second N-terminal domain IN878_RS09450 PF02952 L-fucose isomerase, C-terminal domain IN878_RS09450 PF07881 L-fucose isomerase, first N-terminal domain IN878_RS09455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IN878_RS09455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS09460 PF05025 RbsD / FucU transport protein family IN878_RS09465 PF00455 DeoR C terminal sensor domain IN878_RS09465 PF08220 DeoR-like helix-turn-helix domain IN878_RS09470 PF01728 FtsJ-like methyltransferase IN878_RS09470 PF18125 RlmM ferredoxin-like domain IN878_RS09475 PF04241 Protein of unknown function (DUF423) IN878_RS09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS09480 PF03466 LysR substrate binding domain IN878_RS09485 PF06004 Bacterial protein of unknown function (DUF903) IN878_RS09490 PF00266 Aminotransferase class-V IN878_RS09495 PF02657 Fe-S metabolism associated domain IN878_RS09500 PF00899 ThiF family IN878_RS09505 PF03562 MltA specific insert domain IN878_RS09505 PF06725 3D domain IN878_RS09525 PF01520 N-acetylmuramoyl-L-alanine amidase IN878_RS09525 PF11741 AMIN domain IN878_RS09530 PF00583 Acetyltransferase (GNAT) family IN878_RS09530 PF00696 Amino acid kinase family IN878_RS09535 PF13538 UvrD-like helicase C-terminal domain IN878_RS09540 PF12705 PD-(D/E)XK nuclease superfamily IN878_RS09540 PF00580 UvrD/REP helicase N-terminal domain IN878_RS09540 PF13361 UvrD-like helicase C-terminal domain IN878_RS09545 PF16187 Middle or third domain of peptidase_M16 IN878_RS09545 PF05193 Peptidase M16 inactive domain IN878_RS09545 PF00675 Insulinase (Peptidase family M16) IN878_RS09550 PF17946 RecC C-terminal domain IN878_RS09555 PF07963 Prokaryotic N-terminal methylation motif IN878_RS09555 PF12528 Type II secretion prepilin peptidase dependent protein C IN878_RS09560 PF10713 Protein of unknown function (DUF2509) IN878_RS09565 PF07963 Prokaryotic N-terminal methylation motif IN878_RS09570 PF07963 Prokaryotic N-terminal methylation motif IN878_RS09575 PF00303 Thymidylate synthase IN878_RS09580 PF01790 Prolipoprotein diacylglyceryl transferase IN878_RS09585 PF00391 PEP-utilising enzyme, mobile domain IN878_RS09585 PF05524 PEP-utilising enzyme, N-terminal IN878_RS09585 PF01590 GAF domain IN878_RS09585 PF02896 PEP-utilising enzyme, TIM barrel domain IN878_RS09590 PF00293 NUDIX domain IN878_RS09595 PF02976 DNA mismatch repair enzyme MutH IN878_RS09600 PF03741 Integral membrane protein TerC family IN878_RS09605 PF06004 Bacterial protein of unknown function (DUF903) IN878_RS09610 PF00248 Aldo/keto reductase family IN878_RS09615 PF07690 Major Facilitator Superfamily IN878_RS09620 PF00501 AMP-binding enzyme IN878_RS09620 PF01553 Acyltransferase IN878_RS09625 PF00356 Bacterial regulatory proteins, lacI family IN878_RS09630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IN878_RS09630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IN878_RS09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS09635 PF03466 LysR substrate binding domain IN878_RS09640 PF01177 Asp/Glu/Hydantoin racemase IN878_RS09645 PF00083 Sugar (and other) transporter IN878_RS09655 PF04962 KduI/IolB family IN878_RS09660 PF02803 Thiolase, C-terminal domain IN878_RS09660 PF00108 Thiolase, N-terminal domain IN878_RS09665 PF03222 Tryptophan/tyrosine permease family IN878_RS09670 PF00196 Bacterial regulatory proteins, luxR family IN878_RS09675 PF00486 Transcriptional regulatory protein, C terminal IN878_RS09700 PF07720 Tetratricopeptide repeat IN878_RS09720 PF01464 Transglycosylase SLT domain IN878_RS09740 PF01514 Secretory protein of YscJ/FliF family IN878_RS09750 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF IN878_RS09755 PF09480 Type III secretion system protein PrgH-EprH (PrgH) IN878_RS09770 PF01312 FlhB HrpN YscU SpaS Family IN878_RS09775 PF01312 FlhB HrpN YscU SpaS Family IN878_RS09780 PF01311 Bacterial export proteins, family 1 IN878_RS09785 PF01313 Bacterial export proteins, family 3 IN878_RS09790 PF00813 FliP family IN878_RS09795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IN878_RS09815 PF01476 LysM domain IN878_RS09815 PF01551 Peptidase family M23 IN878_RS09820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IN878_RS09820 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IN878_RS09825 PF03450 CO dehydrogenase flavoprotein C-terminal domain IN878_RS09825 PF00941 FAD binding domain in molybdopterin dehydrogenase IN878_RS09830 PF01799 [2Fe-2S] binding domain IN878_RS09830 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS09835 PF00158 Sigma-54 interaction domain IN878_RS09835 PF13188 PAS domain IN878_RS09835 PF02954 Bacterial regulatory protein, Fis family IN878_RS09840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IN878_RS09840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IN878_RS09845 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS09850 PF07687 Peptidase dimerisation domain IN878_RS09850 PF01546 Peptidase family M20/M25/M40 IN878_RS09855 PF01979 Amidohydrolase family IN878_RS09860 PF00696 Amino acid kinase family IN878_RS09865 PF02625 XdhC and CoxI family IN878_RS09865 PF13478 XdhC Rossmann domain IN878_RS09875 PF12804 MobA-like NTP transferase domain IN878_RS09880 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS09880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IN878_RS09885 PF01979 Amidohydrolase family IN878_RS09890 PF00941 FAD binding domain in molybdopterin dehydrogenase IN878_RS09895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IN878_RS09895 PF01799 [2Fe-2S] binding domain IN878_RS09895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IN878_RS09900 PF00860 Permease family IN878_RS09905 PF01979 Amidohydrolase family IN878_RS09910 PF00860 Permease family IN878_RS09915 PF13247 4Fe-4S dicluster domain IN878_RS09920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IN878_RS09920 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS09920 PF13247 4Fe-4S dicluster domain IN878_RS09925 PF00860 Permease family IN878_RS09940 PF00293 NUDIX domain IN878_RS09945 PF00152 tRNA synthetases class II (D, K and N) IN878_RS09945 PF01336 OB-fold nucleic acid binding domain IN878_RS09955 PF17768 RecJ OB domain IN878_RS09955 PF01368 DHH family IN878_RS09955 PF02272 DHHA1 domain IN878_RS09960 PF10411 Disulfide bond isomerase protein N-terminus IN878_RS09960 PF13098 Thioredoxin-like domain IN878_RS09965 PF00589 Phage integrase family IN878_RS09965 PF02899 Phage integrase, N-terminal SAM-like domain IN878_RS09970 PF00258 Flavodoxin IN878_RS09975 PF07254 Membrane-bound toxin component of toxin-antitoxin system IN878_RS09980 PF03937 Flavinator of succinate dehydrogenase IN878_RS09985 PF01571 Aminomethyltransferase folate-binding domain IN878_RS09990 PF03006 Haemolysin-III related IN878_RS09995 PF04266 ASCH domain IN878_RS10000 PF00232 Glycosyl hydrolase family 1 IN878_RS10010 PF02347 Glycine cleavage system P-protein IN878_RS10015 PF01597 Glycine cleavage H-protein IN878_RS10020 PF08669 Glycine cleavage T-protein C-terminal barrel domain IN878_RS10020 PF01571 Aminomethyltransferase folate-binding domain IN878_RS10030 PF01494 FAD binding domain IN878_RS10035 PF01494 FAD binding domain IN878_RS10040 PF05195 Aminopeptidase P, N-terminal domain IN878_RS10040 PF00557 Metallopeptidase family M24 IN878_RS10045 PF03695 Uncharacterised protein family (UPF0149) IN878_RS10050 PF05164 Cell division protein ZapA IN878_RS10060 PF01812 5-formyltetrahydrofolate cyclo-ligase family IN878_RS10070 PF01842 ACT domain IN878_RS10070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IN878_RS10070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IN878_RS10075 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IN878_RS10080 PF03466 LysR substrate binding domain IN878_RS10085 PF03466 LysR substrate binding domain IN878_RS10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS10090 PF01642 Methylmalonyl-CoA mutase IN878_RS10090 PF02310 B12 binding domain IN878_RS10100 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS10105 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IN878_RS10105 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IN878_RS10110 PF03466 LysR substrate binding domain IN878_RS10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS10115 PF04402 Protein of unknown function (DUF541) IN878_RS10120 PF01810 LysE type translocator IN878_RS10125 PF00924 Mechanosensitive ion channel IN878_RS10125 PF05552 Conserved TM helix IN878_RS10130 PF01116 Fructose-bisphosphate aldolase class-II IN878_RS10135 PF00162 Phosphoglycerate kinase IN878_RS10140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IN878_RS10140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IN878_RS10150 PF05068 Mannitol repressor IN878_RS10155 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IN878_RS10160 PF00107 Zinc-binding dehydrogenase IN878_RS10160 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS10165 PF02378 Phosphotransferase system, EIIC IN878_RS10165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS10170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS10175 PF00456 Transketolase, thiamine diphosphate binding domain IN878_RS10175 PF02780 Transketolase, C-terminal domain IN878_RS10175 PF02779 Transketolase, pyrimidine binding domain IN878_RS10180 PF01435 Peptidase family M48 IN878_RS10185 PF00491 Arginase family IN878_RS10190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IN878_RS10190 PF17810 Arginine decarboxylase helical bundle domain IN878_RS10190 PF17944 Arginine decarboxylase C-terminal helical extension IN878_RS10195 PF11036 Virulence promoting factor IN878_RS10200 PF17430 Uncharacterized YqgC-like IN878_RS10205 PF00438 S-adenosylmethionine synthetase, N-terminal domain IN878_RS10205 PF02773 S-adenosylmethionine synthetase, C-terminal domain IN878_RS10205 PF02772 S-adenosylmethionine synthetase, central domain IN878_RS10210 PF00083 Sugar (and other) transporter IN878_RS10215 PF17283 SprT-like zinc ribbon domain IN878_RS10215 PF10263 SprT-like family IN878_RS10220 PF04231 Endonuclease I IN878_RS10225 PF04452 RNA methyltransferase IN878_RS10230 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IN878_RS10230 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IN878_RS10235 PF02622 Uncharacterized ACR, COG1678 IN878_RS10240 PF03652 Holliday junction resolvase IN878_RS10245 PF00437 Type II/IV secretion system protein IN878_RS10250 PF01168 Alanine racemase, N-terminal domain IN878_RS10255 PF02325 YGGT family IN878_RS10260 PF02594 Uncharacterised ACR, YggU family COG1872 IN878_RS10265 PF01725 Ham1 family IN878_RS10270 PF06969 HemN C-terminal domain IN878_RS10270 PF04055 Radical SAM superfamily IN878_RS10275 PF06717 Protein of unknown function (DUF1202) IN878_RS10280 PF17763 Glutaminase/Asparaginase C-terminal domain IN878_RS10280 PF00710 Asparaginase, N-terminal IN878_RS10285 PF11101 Protein of unknown function (DUF2884) IN878_RS10290 PF04320 Protein with unknown function (DUF469) IN878_RS10295 PF02390 Putative methyltransferase IN878_RS10300 PF10576 Iron-sulfur binding domain of endonuclease III IN878_RS10300 PF14815 NUDIX domain IN878_RS10300 PF00730 HhH-GPD superfamily base excision DNA repair protein IN878_RS10300 PF00633 Helix-hairpin-helix motif IN878_RS10305 PF04362 Bacterial Fe(2+) trafficking IN878_RS10310 PF01464 Transglycosylase SLT domain IN878_RS10310 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IN878_RS10315 PF03825 Nucleoside H+ symporter IN878_RS10320 PF01276 Orn/Lys/Arg decarboxylase, major domain IN878_RS10320 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IN878_RS10320 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IN878_RS10325 PF04474 Protein of unknown function (DUF554) IN878_RS10335 PF13356 Arm DNA-binding domain IN878_RS10335 PF00589 Phage integrase family IN878_RS10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS10425 PF03466 LysR substrate binding domain IN878_RS10430 PF07690 Major Facilitator Superfamily IN878_RS10435 PF07883 Cupin domain IN878_RS10440 PF01557 Fumarylacetoacetate (FAA) hydrolase family IN878_RS10445 PF02798 Glutathione S-transferase, N-terminal domain IN878_RS10445 PF14497 Glutathione S-transferase, C-terminal domain IN878_RS10450 PF01494 FAD binding domain IN878_RS10495 PF04612 Type II secretion system (T2SS), protein M IN878_RS10500 PF01384 Phosphate transporter family IN878_RS10505 PF05257 CHAP domain IN878_RS10505 PF03738 Glutathionylspermidine synthase preATP-grasp IN878_RS10510 PF02798 Glutathione S-transferase, N-terminal domain IN878_RS10515 PF01455 HupF/HypC family IN878_RS10520 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IN878_RS10525 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE IN878_RS10530 PF01750 Hydrogenase maturation protease IN878_RS10535 PF00374 Nickel-dependent hydrogenase IN878_RS10540 PF03916 Polysulphide reductase, NrfD IN878_RS10545 PF13247 4Fe-4S dicluster domain IN878_RS10550 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IN878_RS10550 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal IN878_RS10555 PF11115 Protein of unknown function (DUF2623) IN878_RS10565 PF00248 Aldo/keto reductase family IN878_RS10570 PF03350 Uncharacterized protein family, UPF0114 IN878_RS10580 PF02472 Biopolymer transport protein ExbD/TolR IN878_RS10585 PF01618 MotA/TolQ/ExbB proton channel family IN878_RS10590 PF01053 Cys/Met metabolism PLP-dependent enzyme IN878_RS10595 PF09335 SNARE associated Golgi protein IN878_RS10600 PF12833 Helix-turn-helix domain IN878_RS10600 PF06719 AraC-type transcriptional regulator N-terminus IN878_RS10605 PF00465 Iron-containing alcohol dehydrogenase IN878_RS10610 PF00248 Aldo/keto reductase family IN878_RS10615 PF12883 Protein of unknown function (DUF3828) IN878_RS10620 PF04728 Lipoprotein leucine-zipper IN878_RS10625 PF08497 Radical SAM N-terminal IN878_RS10625 PF04055 Radical SAM superfamily IN878_RS10625 PF11842 Domain of unknown function (DUF3362) IN878_RS10630 PF00394 Multicopper oxidase IN878_RS10630 PF07732 Multicopper oxidase IN878_RS10630 PF07731 Multicopper oxidase IN878_RS10635 PF01553 Acyltransferase IN878_RS10640 PF03989 DNA gyrase C-terminal domain, beta-propeller IN878_RS10640 PF00521 DNA gyrase/topoisomerase IV, subunit A IN878_RS10645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS10650 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA IN878_RS10660 PF06445 GyrI-like small molecule binding domain IN878_RS10665 PF04076 Bacterial OB fold (BOF) protein IN878_RS10670 PF00072 Response regulator receiver domain IN878_RS10670 PF00486 Transcriptional regulatory protein, C terminal IN878_RS10675 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS10675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS10675 PF08521 Two-component sensor kinase N-terminal IN878_RS10680 PF10840 Protein of unknown function (DUF2645) IN878_RS10685 PF02525 Flavodoxin-like fold IN878_RS10690 PF03992 Antibiotic biosynthesis monooxygenase IN878_RS10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS10695 PF01751 Toprim domain IN878_RS10695 PF00204 DNA gyrase B IN878_RS10695 PF00986 DNA gyrase B subunit, carboxyl terminus IN878_RS10700 PF05728 Uncharacterised protein family (UPF0227) IN878_RS10705 PF00149 Calcineurin-like phosphoesterase IN878_RS10710 PF06853 Protein of unknown function (DUF1249) IN878_RS10715 PF00293 NUDIX domain IN878_RS10720 PF02321 Outer membrane efflux protein IN878_RS10725 PF06693 Protein of unknown function (DUF1190) IN878_RS10730 PF03738 Glutathionylspermidine synthase preATP-grasp IN878_RS10735 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IN878_RS10740 PF02535 ZIP Zinc transporter IN878_RS10750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IN878_RS10755 PF04380 Membrane fusogenic activity IN878_RS10760 PF00419 Fimbrial protein IN878_RS10765 PF13954 PapC N-terminal domain IN878_RS10765 PF00577 Outer membrane usher protein IN878_RS10765 PF13953 PapC C-terminal domain IN878_RS10770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS10770 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS10780 PF08971 Glycogen synthesis protein IN878_RS10785 PF07290 Protein of unknown function (DUF1449) IN878_RS10790 PF01145 SPFH domain / Band 7 family IN878_RS10790 PF15975 Flotillin IN878_RS10805 PF00294 pfkB family carbohydrate kinase IN878_RS10805 PF01467 Cytidylyltransferase-like IN878_RS10810 PF03710 Glutamate-ammonia ligase adenylyltransferase IN878_RS10810 PF08335 GlnD PII-uridylyltransferase IN878_RS10815 PF01928 CYTH domain IN878_RS10820 PF08239 Bacterial SH3 domain IN878_RS10825 PF01966 HD domain IN878_RS10825 PF01743 Poly A polymerase head domain IN878_RS10825 PF12627 Probable RNA and SrmB- binding site of polymerase A IN878_RS10830 PF02673 Bacitracin resistance protein BacA IN878_RS10835 PF02152 Dihydroneopterin aldolase IN878_RS10840 PF02660 Glycerol-3-phosphate acyltransferase IN878_RS10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS10845 PF03466 LysR substrate binding domain IN878_RS10850 PF05681 Fumarate hydratase (Fumerase) IN878_RS10855 PF05683 Fumarase C-terminus IN878_RS10860 PF00939 Sodium:sulfate symporter transmembrane region IN878_RS10865 PF00814 Glycoprotease family IN878_RS10870 PF01165 Ribosomal protein S21 IN878_RS10875 PF01807 CHC2 zinc finger IN878_RS10875 PF08275 DNA primase catalytic core, N-terminal domain IN878_RS10875 PF08278 DNA primase DnaG DnaB-binding IN878_RS10875 PF10410 DnaB-helicase binding domain of primase IN878_RS10880 PF04539 Sigma-70 region 3 IN878_RS10880 PF03979 Sigma-70 factor, region 1.1 IN878_RS10880 PF04546 Sigma-70, non-essential region IN878_RS10880 PF04542 Sigma-70 region 2 IN878_RS10880 PF04545 Sigma-70, region 4 IN878_RS10880 PF00140 Sigma-70 factor, region 1.2 IN878_RS10885 PF03167 Uracil DNA glycosylase superfamily IN878_RS10895 PF04954 Siderophore-interacting protein IN878_RS10895 PF08021 Siderophore-interacting FAD-binding domain IN878_RS10900 PF03551 Transcriptional regulator PadR-like family IN878_RS10905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IN878_RS10905 PF08447 PAS fold IN878_RS10910 PF00202 Aminotransferase class-III IN878_RS10915 PF01588 Putative tRNA binding domain IN878_RS10920 PF00356 Bacterial regulatory proteins, lacI family IN878_RS10925 PF00703 Glycosyl hydrolases family 2 IN878_RS10925 PF02837 Glycosyl hydrolases family 2, sugar binding domain IN878_RS10925 PF02929 Beta galactosidase small chain IN878_RS10925 PF16353 Domain of unknown function(DUF4981) IN878_RS10925 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IN878_RS10930 PF04074 YhcH/YjgK/YiaL IN878_RS10935 PF13520 Amino acid permease IN878_RS10945 PF01204 Trehalase IN878_RS10950 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS10950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IN878_RS10955 PF01381 Helix-turn-helix IN878_RS10960 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system IN878_RS10965 PF05175 Methyltransferase small domain IN878_RS10970 PF01863 Protein of unknown function DUF45 IN878_RS10975 PF02698 DUF218 domain IN878_RS10980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IN878_RS10985 PF03741 Integral membrane protein TerC family IN878_RS10990 PF00375 Sodium:dicarboxylate symporter family IN878_RS10995 PF10688 Bacterial inner membrane protein IN878_RS11000 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IN878_RS11000 PF08666 SAF domain IN878_RS11005 PF02614 Glucuronate isomerase IN878_RS11010 PF07690 Major Facilitator Superfamily IN878_RS11015 PF07729 FCD domain IN878_RS11015 PF00392 Bacterial regulatory proteins, gntR family IN878_RS11020 PF09335 SNARE associated Golgi protein IN878_RS11025 PF13721 SecD export protein N-terminal TM region IN878_RS11030 PF06476 Protein of unknown function (DUF1090) IN878_RS11035 PF05957 Bacterial protein of unknown function (DUF883) IN878_RS11040 PF07332 Putative Actinobacterial Holin-X, holin superfamily III IN878_RS11045 PF13997 YqjK-like protein IN878_RS11050 PF07681 DoxX IN878_RS11055 PF13409 Glutathione S-transferase, N-terminal domain IN878_RS11060 PF05656 Protein of unknown function (DUF805) IN878_RS11065 PF05656 Protein of unknown function (DUF805) IN878_RS11070 PF03466 LysR substrate binding domain IN878_RS11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS11075 PF17954 Quercetinase C-terminal cupin domain IN878_RS11075 PF02678 Pirin IN878_RS11085 PF03313 Serine dehydratase alpha chain IN878_RS11095 PF03313 Serine dehydratase alpha chain IN878_RS11095 PF03315 Serine dehydratase beta chain IN878_RS11100 PF01042 Endoribonuclease L-PSP IN878_RS11105 PF02901 Pyruvate formate lyase-like IN878_RS11105 PF01228 Glycine radical IN878_RS11110 PF00871 Acetokinase family IN878_RS11115 PF03222 Tryptophan/tyrosine permease family IN878_RS11120 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS11125 PF03466 LysR substrate binding domain IN878_RS11150 PF02595 Glycerate kinase family IN878_RS11155 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IN878_RS11155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IN878_RS11160 PF03328 HpcH/HpaI aldolase/citrate lyase family IN878_RS11165 PF07690 Major Facilitator Superfamily IN878_RS11185 PF15937 prlF antitoxin for toxin YhaV_toxin IN878_RS11190 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system IN878_RS11195 PF08220 DeoR-like helix-turn-helix domain IN878_RS11195 PF00455 DeoR C terminal sensor domain IN878_RS11200 PF08013 Tagatose 6 phosphate kinase IN878_RS11205 PF03830 PTS system sorbose subfamily IIB component IN878_RS11210 PF03609 PTS system sorbose-specific iic component IN878_RS11215 PF03613 PTS system mannose/fructose/sorbose family IID component IN878_RS11220 PF03610 PTS system fructose IIA component IN878_RS11225 PF01979 Amidohydrolase family IN878_RS11230 PF01380 SIS domain IN878_RS11235 PF01116 Fructose-bisphosphate aldolase class-II IN878_RS11240 PF03830 PTS system sorbose subfamily IIB component IN878_RS11245 PF03609 PTS system sorbose-specific iic component IN878_RS11255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IN878_RS11260 PF00419 Fimbrial protein IN878_RS11265 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS11265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS11275 PF00419 Fimbrial protein IN878_RS11280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IN878_RS11285 PF04348 LppC putative lipoprotein IN878_RS11290 PF02021 Uncharacterised protein family UPF0102 IN878_RS11295 PF13580 SIS domain IN878_RS11300 PF04972 BON domain IN878_RS11305 PF03773 Predicted permease IN878_RS11310 PF13460 NAD(P)H-binding IN878_RS11315 PF01965 DJ-1/PfpI family IN878_RS11325 PF01541 GIY-YIG catalytic domain IN878_RS11330 PF13508 Acetyltransferase (GNAT) domain IN878_RS11335 PF02036 SCP-2 sterol transfer family IN878_RS11340 PF01136 Peptidase family U32 IN878_RS11345 PF01136 Peptidase family U32 IN878_RS11350 PF00296 Luciferase-like monooxygenase IN878_RS11355 PF03222 Tryptophan/tyrosine permease family IN878_RS11360 PF00271 Helicase conserved C-terminal domain IN878_RS11360 PF03880 DbpA RNA binding domain IN878_RS11360 PF12343 Cold shock protein DEAD box A IN878_RS11360 PF00270 DEAD/DEAH box helicase IN878_RS11370 PF13181 Tetratricopeptide repeat IN878_RS11370 PF07719 Tetratricopeptide repeat IN878_RS11375 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IN878_RS11375 PF01138 3' exoribonuclease family, domain 1 IN878_RS11375 PF03725 3' exoribonuclease family, domain 2 IN878_RS11375 PF00013 KH domain IN878_RS11375 PF00575 S1 RNA binding domain IN878_RS11380 PF00312 Ribosomal protein S15 IN878_RS11385 PF09157 Pseudouridine synthase II TruB, C-terminal IN878_RS11385 PF01509 TruB family pseudouridylate synthase (N terminal domain) IN878_RS11385 PF16198 tRNA pseudouridylate synthase B C-terminal domain IN878_RS11390 PF02033 Ribosome-binding factor A IN878_RS11395 PF11987 Translation-initiation factor 2 IN878_RS11395 PF00009 Elongation factor Tu GTP binding domain IN878_RS11395 PF04760 Translation initiation factor IF-2, N-terminal region IN878_RS11395 PF08364 Bacterial translation initiation factor IF-2 associated region IN878_RS11400 PF00575 S1 RNA binding domain IN878_RS11400 PF13184 NusA-like KH domain IN878_RS11400 PF08529 NusA N-terminal domain IN878_RS11405 PF17384 RimP C-terminal SH3 domain IN878_RS11405 PF02576 RimP N-terminal domain IN878_RS11415 PF00764 Arginosuccinate synthase IN878_RS11420 PF00884 Sulfatase IN878_RS11430 PF03840 Preprotein translocase SecG subunit IN878_RS11435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IN878_RS11435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IN878_RS11435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IN878_RS11435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IN878_RS11440 PF00809 Pterin binding enzyme IN878_RS11445 PF00004 ATPase family associated with various cellular activities (AAA) IN878_RS11445 PF06480 FtsH Extracellular IN878_RS11445 PF17862 AAA+ lid domain IN878_RS11445 PF01434 Peptidase family M41 IN878_RS11450 PF01728 FtsJ-like methyltransferase IN878_RS11455 PF01985 CRS1 / YhbY (CRM) domain IN878_RS11460 PF03449 Transcription elongation factor, N-terminal IN878_RS11460 PF01272 Transcription elongation factor, GreA/GreB, C-term IN878_RS11465 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IN878_RS11470 PF01018 GTP1/OBG IN878_RS11470 PF01926 50S ribosome-binding GTPase IN878_RS11475 PF00892 EamA-like transporter family IN878_RS11480 PF01016 Ribosomal L27 protein IN878_RS11485 PF00829 Ribosomal prokaryotic L21 protein IN878_RS11490 PF00348 Polyprenyl synthetase IN878_RS11495 PF13693 Winged helix-turn-helix DNA-binding IN878_RS11500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IN878_RS11505 PF01722 BolA-like protein IN878_RS11510 PF13466 STAS domain IN878_RS11515 PF05494 MlaC protein IN878_RS11520 PF02470 MlaD protein IN878_RS11525 PF02405 Permease MlaE IN878_RS11530 PF00005 ABC transporter IN878_RS11535 PF01699 Sodium/calcium exchanger protein IN878_RS11540 PF01380 SIS domain IN878_RS11540 PF00571 CBS domain IN878_RS11550 PF06835 Lipopolysaccharide-assembly, LptC-related IN878_RS11555 PF03968 OstA-like protein IN878_RS11560 PF12399 Branched-chain amino acid ATP-binding cassette transporter IN878_RS11560 PF00005 ABC transporter IN878_RS11565 PF00309 Sigma-54 factor, Activator interacting domain (AID) IN878_RS11565 PF04963 Sigma-54 factor, core binding domain IN878_RS11565 PF04552 Sigma-54, DNA binding domain IN878_RS11570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IN878_RS11575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS11580 PF03668 P-loop ATPase protein family IN878_RS11585 PF00381 PTS HPr component phosphorylation site IN878_RS11590 PF10707 PhoP regulatory network protein YrbL IN878_RS11595 PF00912 Transglycosylase IN878_RS11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS11605 PF00072 Response regulator receiver domain IN878_RS11605 PF00989 PAS fold IN878_RS11605 PF01627 Hpt domain IN878_RS11605 PF18415 Histidine kinase receptor ArcB trans-membrane domain IN878_RS11605 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS11610 PF16199 Radical_SAM C-terminal domain IN878_RS11610 PF04055 Radical SAM superfamily IN878_RS11615 PF01493 GXGXG motif IN878_RS11615 PF01645 Conserved region in glutamate synthase IN878_RS11615 PF04898 Glutamate synthase central domain IN878_RS11615 PF00310 Glutamine amidotransferases class-II IN878_RS11620 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS11620 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IN878_RS11625 PF06551 Protein of unknown function (DUF1120) IN878_RS11630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS11635 PF13954 PapC N-terminal domain IN878_RS11635 PF00577 Outer membrane usher protein IN878_RS11635 PF13953 PapC C-terminal domain IN878_RS11645 PF06551 Protein of unknown function (DUF1120) IN878_RS11650 PF06250 YhcG PDDEXK nuclease domain IN878_RS11650 PF17761 DUF1016 N-terminal domain IN878_RS11655 PF04074 YhcH/YjgK/YiaL IN878_RS11660 PF00480 ROK family IN878_RS11665 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase IN878_RS11670 PF07690 Major Facilitator Superfamily IN878_RS11675 PF00701 Dihydrodipicolinate synthetase family IN878_RS11680 PF07729 FCD domain IN878_RS11680 PF00392 Bacterial regulatory proteins, gntR family IN878_RS11685 PF03606 C4-dicarboxylate anaerobic carrier IN878_RS11690 PF04386 Stringent starvation protein B IN878_RS11695 PF02798 Glutathione S-transferase, N-terminal domain IN878_RS11695 PF00043 Glutathione S-transferase, C-terminal domain IN878_RS11700 PF00380 Ribosomal protein S9/S16 IN878_RS11705 PF00572 Ribosomal protein L13 IN878_RS11710 PF03969 AFG1-like ATPase IN878_RS11715 PF06295 Protein of unknown function (DUF1043) IN878_RS11720 PF00595 PDZ domain IN878_RS11720 PF13180 PDZ domain IN878_RS11725 PF13180 PDZ domain IN878_RS11730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IN878_RS11730 PF00056 lactate/malate dehydrogenase, NAD binding domain IN878_RS11735 PF02863 Arginine repressor, C-terminal domain IN878_RS11735 PF01316 Arginine repressor, DNA binding domain IN878_RS11740 PF07338 Protein of unknown function (DUF1471) IN878_RS11745 PF01337 Barstar (barnase inhibitor) IN878_RS11750 PF04632 Fusaric acid resistance protein family IN878_RS11755 PF13533 Biotin-lipoyl like IN878_RS11760 PF07869 Protein of unknown function (DUF1656) IN878_RS11765 PF03466 LysR substrate binding domain IN878_RS11765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS11770 PF01523 Putative modulator of DNA gyrase IN878_RS11775 PF13502 AsmA-like C-terminal region IN878_RS11775 PF13116 Protein of unknown function IN878_RS11780 PF00575 S1 RNA binding domain IN878_RS11780 PF10150 Ribonuclease E/G family IN878_RS11785 PF02545 Maf-like protein IN878_RS11790 PF04093 rod shape-determining protein MreD IN878_RS11795 PF04085 rod shape-determining protein MreC IN878_RS11805 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS11805 PF00563 EAL domain IN878_RS11805 PF17157 Gammaproteobacterial periplasmic sensor domain IN878_RS11810 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS11810 PF00107 Zinc-binding dehydrogenase IN878_RS11815 PF00364 Biotin-requiring enzyme IN878_RS11820 PF02785 Biotin carboxylase C-terminal domain IN878_RS11820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IN878_RS11820 PF00289 Biotin carboxylase, N-terminal domain IN878_RS11825 PF06196 Protein of unknown function (DUF997) IN878_RS11830 PF00474 Sodium:solute symporter family IN878_RS11840 PF01207 Dihydrouridine synthase (Dus) IN878_RS11845 PF02954 Bacterial regulatory protein, Fis family IN878_RS11850 PF01555 DNA methylase IN878_RS11855 PF10831 Protein of unknown function (DUF2556) IN878_RS11860 PF08361 MAATS-type transcriptional repressor, C-terminal region IN878_RS11860 PF00440 Bacterial regulatory proteins, tetR family IN878_RS11865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS11865 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS11870 PF00873 AcrB/AcrD/AcrF family IN878_RS11880 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS11885 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS11890 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS11895 PF00005 ABC transporter IN878_RS11935 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS11940 PF07369 Protein of unknown function (DUF1488) IN878_RS11945 PF01488 Shikimate / quinate 5-dehydrogenase IN878_RS11945 PF08501 Shikimate dehydrogenase substrate binding domain IN878_RS11945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IN878_RS11950 PF01300 Telomere recombination IN878_RS11955 PF01396 Topoisomerase DNA binding C4 zinc finger IN878_RS11960 PF04361 Protein of unknown function (DUF494) IN878_RS11965 PF02481 DNA recombination-mediator protein A IN878_RS11965 PF17782 DprA winged helix domain IN878_RS11970 PF01327 Polypeptide deformylase IN878_RS11975 PF00551 Formyl transferase IN878_RS11975 PF02911 Formyl transferase, C-terminal domain IN878_RS11980 PF01029 NusB family IN878_RS11980 PF01189 16S rRNA methyltransferase RsmB/F IN878_RS11985 PF02254 TrkA-N domain IN878_RS11985 PF02080 TrkA-C domain IN878_RS11990 PF01741 Large-conductance mechanosensitive channel, MscL IN878_RS11995 PF03889 Alternative ribosome-rescue factor A IN878_RS12000 PF13411 MerR HTH family regulatory protein IN878_RS12005 PF09350 Domain of unknown function (DUF1992) IN878_RS12010 PF01196 Ribosomal protein L17 IN878_RS12015 PF01000 RNA polymerase Rpb3/RpoA insert domain IN878_RS12015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IN878_RS12015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IN878_RS12020 PF00163 Ribosomal protein S4/S9 N-terminal domain IN878_RS12020 PF01479 S4 domain IN878_RS12025 PF00411 Ribosomal protein S11 IN878_RS12030 PF00416 Ribosomal protein S13/S18 IN878_RS12035 PF00444 Ribosomal protein L36 IN878_RS12040 PF00344 SecY translocase IN878_RS12045 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IN878_RS12050 PF00327 Ribosomal protein L30p/L7e IN878_RS12055 PF03719 Ribosomal protein S5, C-terminal domain IN878_RS12055 PF00333 Ribosomal protein S5, N-terminal domain IN878_RS12060 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IN878_RS12065 PF00347 Ribosomal protein L6 IN878_RS12070 PF00410 Ribosomal protein S8 IN878_RS12075 PF00253 Ribosomal protein S14p/S29e IN878_RS12080 PF00673 ribosomal L5P family C-terminus IN878_RS12080 PF00281 Ribosomal protein L5 IN878_RS12085 PF00467 KOW motif IN878_RS12085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IN878_RS12090 PF00238 Ribosomal protein L14p/L23e IN878_RS12095 PF00366 Ribosomal protein S17 IN878_RS12100 PF00831 Ribosomal L29 protein IN878_RS12105 PF00252 Ribosomal protein L16p/L10e IN878_RS12110 PF00189 Ribosomal protein S3, C-terminal domain IN878_RS12110 PF07650 KH domain IN878_RS12115 PF00237 Ribosomal protein L22p/L17e IN878_RS12120 PF00203 Ribosomal protein S19 IN878_RS12125 PF03947 Ribosomal Proteins L2, C-terminal domain IN878_RS12125 PF00181 Ribosomal Proteins L2, RNA binding domain IN878_RS12130 PF00276 Ribosomal protein L23 IN878_RS12135 PF00573 Ribosomal protein L4/L1 family IN878_RS12140 PF00297 Ribosomal protein L3 IN878_RS12145 PF00338 Ribosomal protein S10p/S20e IN878_RS12155 PF13401 AAA domain IN878_RS12155 PF01471 Putative peptidoglycan binding domain IN878_RS12160 PF11356 Type II secretion system protein C IN878_RS12165 PF03958 Bacterial type II/III secretion system short domain IN878_RS12165 PF00263 Bacterial type II and III secretion system protein IN878_RS12170 PF00437 Type II/IV secretion system protein IN878_RS12175 PF00482 Type II secretion system (T2SS), protein F IN878_RS12180 PF08334 Type II secretion system (T2SS), protein G IN878_RS12180 PF07963 Prokaryotic N-terminal methylation motif IN878_RS12185 PF12019 Type II transport protein GspH IN878_RS12185 PF07963 Prokaryotic N-terminal methylation motif IN878_RS12190 PF02501 Type II secretion system (T2SS), protein I IN878_RS12190 PF07963 Prokaryotic N-terminal methylation motif IN878_RS12195 PF07963 Prokaryotic N-terminal methylation motif IN878_RS12195 PF11612 Type II secretion system (T2SS), protein J IN878_RS12200 PF03934 Type II secretion system (T2SS), protein K IN878_RS12205 PF05134 Type II secretion system (T2SS), protein L IN878_RS12205 PF12693 GspL periplasmic domain IN878_RS12210 PF04612 Type II secretion system (T2SS), protein M IN878_RS12215 PF01478 Type IV leader peptidase family IN878_RS12220 PF00210 Ferritin-like domain IN878_RS12225 PF04324 BFD-like [2Fe-2S] binding domain IN878_RS12230 PF02839 Carbohydrate binding domain IN878_RS12235 PF03143 Elongation factor Tu C-terminal domain IN878_RS12235 PF03144 Elongation factor Tu domain 2 IN878_RS12235 PF00009 Elongation factor Tu GTP binding domain IN878_RS12240 PF00679 Elongation factor G C-terminus IN878_RS12240 PF14492 Elongation Factor G, domain II IN878_RS12240 PF03764 Elongation factor G, domain IV IN878_RS12240 PF00009 Elongation factor Tu GTP binding domain IN878_RS12240 PF03144 Elongation factor Tu domain 2 IN878_RS12245 PF00177 Ribosomal protein S7p/S5e IN878_RS12250 PF00164 Ribosomal protein S12/S23 IN878_RS12255 PF04077 DsrH like protein IN878_RS12260 PF02635 DsrE/DsrF-like family IN878_RS12265 PF02635 DsrE/DsrF-like family IN878_RS12270 PF08348 YheO-like PAS domain IN878_RS12270 PF13309 HTH domain IN878_RS12275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IN878_RS12275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IN878_RS12280 PF04102 SlyX IN878_RS12285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IN878_RS12290 PF09526 Probable metal-binding protein (DUF2387) IN878_RS12295 PF00999 Sodium/hydrogen exchanger family IN878_RS12295 PF02254 TrkA-N domain IN878_RS12300 PF02525 Flavodoxin-like fold IN878_RS12305 PF00005 ABC transporter IN878_RS12305 PF12848 ABC transporter IN878_RS12310 PF00561 alpha/beta hydrolase fold IN878_RS12315 PF06794 Uncharacterised protein family (UPF0270) IN878_RS12320 PF00485 Phosphoribulokinase / Uridine kinase family IN878_RS12325 PF02566 OsmC-like protein IN878_RS12330 PF13545 Crp-like helix-turn-helix domain IN878_RS12330 PF00027 Cyclic nucleotide-binding domain IN878_RS12335 PF12805 FUSC-like inner membrane protein yccS IN878_RS12340 PF00202 Aminotransferase class-III IN878_RS12345 PF00117 Glutamine amidotransferase class-I IN878_RS12350 PF02661 Fic/DOC family IN878_RS12355 PF10832 Protein of unknown function (DUF2559) IN878_RS12360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IN878_RS12365 PF07690 Major Facilitator Superfamily IN878_RS12370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IN878_RS12370 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS12370 PF18267 Rubredoxin NAD+ reductase C-terminal domain IN878_RS12370 PF04324 BFD-like [2Fe-2S] binding domain IN878_RS12370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IN878_RS12375 PF13806 Rieske-like [2Fe-2S] domain IN878_RS12380 PF01226 Formate/nitrite transporter IN878_RS12385 PF10414 Sirohaem synthase dimerisation region IN878_RS12385 PF14824 Sirohaem biosynthesis protein central IN878_RS12385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IN878_RS12390 PF13978 Protein of unknown function (DUF4223) IN878_RS12395 PF13520 Amino acid permease IN878_RS12400 PF01380 SIS domain IN878_RS12405 PF01261 Xylose isomerase-like TIM barrel IN878_RS12410 PF00294 pfkB family carbohydrate kinase IN878_RS12415 PF00392 Bacterial regulatory proteins, gntR family IN878_RS12415 PF07702 UTRA domain IN878_RS12420 PF00155 Aminotransferase class I and II IN878_RS12425 PF10797 Protein of unknown function IN878_RS12430 PF10941 Protein of unknown function DUF2620 IN878_RS12435 PF02126 Phosphotriesterase family IN878_RS12440 PF01676 Metalloenzyme superfamily IN878_RS12445 PF01168 Alanine racemase, N-terminal domain IN878_RS12455 PF14503 YhfZ C-terminal domain IN878_RS12455 PF14502 Helix-turn-helix domain IN878_RS12460 PF00579 tRNA synthetases class I (W and Y) IN878_RS12465 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS12470 PF00834 Ribulose-phosphate 3 epimerase family IN878_RS12475 PF02086 D12 class N6 adenine-specific DNA methyltransferase IN878_RS12480 PF05036 Sporulation related domain IN878_RS12485 PF01761 3-dehydroquinate synthase IN878_RS12490 PF01202 Shikimate kinase IN878_RS12495 PF03958 Bacterial type II/III secretion system short domain IN878_RS12495 PF00263 Bacterial type II and III secretion system protein IN878_RS12500 PF10748 DNA utilization proteins HofP IN878_RS12510 PF05137 Fimbrial assembly protein (PilN) IN878_RS12520 PF00905 Penicillin binding protein transpeptidase domain IN878_RS12520 PF00912 Transglycosylase IN878_RS12520 PF17092 Penicillin-binding protein OB-like domain IN878_RS12525 PF00293 NUDIX domain IN878_RS12530 PF07095 Intracellular growth attenuator protein IgaA IN878_RS12535 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS12540 PF01479 S4 domain IN878_RS12545 PF01430 Hsp33 protein IN878_RS12550 PF13687 Domain of unknown function (DUF4153) IN878_RS12555 PF01293 Phosphoenolpyruvate carboxykinase IN878_RS12560 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS12560 PF00672 HAMP domain IN878_RS12565 PF00072 Response regulator receiver domain IN878_RS12565 PF00486 Transcriptional regulatory protein, C terminal IN878_RS12570 PF03449 Transcription elongation factor, N-terminal IN878_RS12570 PF01272 Transcription elongation factor, GreA/GreB, C-term IN878_RS12575 PF17674 HHH domain IN878_RS12575 PF00575 S1 RNA binding domain IN878_RS12575 PF16921 Tex protein YqgF-like domain IN878_RS12575 PF09371 Tex-like protein N-terminal domain IN878_RS12580 PF04023 FeoA domain IN878_RS12585 PF02421 Ferrous iron transport protein B IN878_RS12585 PF17910 FeoB cytosolic helical domain IN878_RS12585 PF07664 Ferrous iron transport protein B C terminus IN878_RS12585 PF07670 Nucleoside recognition IN878_RS12590 PF09012 FeoC like transcriptional regulator IN878_RS12595 PF04754 Putative transposase, YhgA-like IN878_RS12600 PF00561 alpha/beta hydrolase fold IN878_RS12605 PF00156 Phosphoribosyl transferase domain IN878_RS12610 PF01521 Iron-sulphur cluster biosynthesis IN878_RS12610 PF01106 NifU-like domain IN878_RS12615 PF02447 GntP family permease IN878_RS12620 PF02446 4-alpha-glucanotransferase IN878_RS12625 PF00343 Carbohydrate phosphorylase IN878_RS12630 PF17874 MalT-like TPR region IN878_RS12630 PF00196 Bacterial regulatory proteins, luxR family IN878_RS12635 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain IN878_RS12635 PF01137 RNA 3'-terminal phosphate cyclase IN878_RS12640 PF01139 tRNA-splicing ligase RtcB IN878_RS12645 PF06956 Regulator of RNA terminal phosphate cyclase IN878_RS12645 PF00158 Sigma-54 interaction domain IN878_RS12650 PF08220 DeoR-like helix-turn-helix domain IN878_RS12650 PF00455 DeoR C terminal sensor domain IN878_RS12655 PF01694 Rhomboid family IN878_RS12655 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IN878_RS12660 PF00581 Rhodanese-like domain IN878_RS12665 PF01266 FAD dependent oxidoreductase IN878_RS12665 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IN878_RS12675 PF00343 Carbohydrate phosphorylase IN878_RS12680 PF00534 Glycosyl transferases group 1 IN878_RS12680 PF08323 Starch synthase catalytic domain IN878_RS12685 PF00483 Nucleotidyl transferase IN878_RS12690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IN878_RS12690 PF00128 Alpha amylase, catalytic domain IN878_RS12690 PF18390 Glycogen debranching enzyme C-terminal domain IN878_RS12695 PF02806 Alpha amylase, C-terminal all-beta domain IN878_RS12695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IN878_RS12695 PF00128 Alpha amylase, catalytic domain IN878_RS12700 PF02774 Semialdehyde dehydrogenase, dimerisation domain IN878_RS12700 PF01118 Semialdehyde dehydrogenase, NAD binding domain IN878_RS12705 PF01914 MarC family integral membrane protein IN878_RS12710 PF02447 GntP family permease IN878_RS12715 PF01202 Shikimate kinase IN878_RS12720 PF00356 Bacterial regulatory proteins, lacI family IN878_RS12720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IN878_RS12725 PF02678 Pirin IN878_RS12725 PF17954 Quercetinase C-terminal cupin domain IN878_RS12730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IN878_RS12730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IN878_RS12735 PF00583 Acetyltransferase (GNAT) family IN878_RS12740 PF05638 Type VI secretion system effector, Hcp IN878_RS12755 PF15567 Immunity protein 35 IN878_RS12765 PF10956 Protein of unknown function (DUF2756) IN878_RS12770 PF03009 Glycerophosphoryl diester phosphodiesterase family IN878_RS12775 PF00005 ABC transporter IN878_RS12775 PF17912 MalK OB fold domain IN878_RS12780 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS12790 PF13416 Bacterial extracellular solute-binding protein IN878_RS12795 PF00005 ABC transporter IN878_RS12800 PF12399 Branched-chain amino acid ATP-binding cassette transporter IN878_RS12800 PF00005 ABC transporter IN878_RS12805 PF11862 Domain of unknown function (DUF3382) IN878_RS12805 PF02653 Branched-chain amino acid transport system / permease component IN878_RS12810 PF02653 Branched-chain amino acid transport system / permease component IN878_RS12815 PF13458 Periplasmic binding protein IN878_RS12820 PF12568 Acetyltransferase (GNAT) domain, PanZ IN878_RS12825 PF13458 Periplasmic binding protein IN878_RS12830 PF04545 Sigma-70, region 4 IN878_RS12830 PF04542 Sigma-70 region 2 IN878_RS12835 PF02687 FtsX-like permease family IN878_RS12835 PF18075 FtsX extracellular domain IN878_RS12840 PF00005 ABC transporter IN878_RS12845 PF02881 SRP54-type protein, helical bundle domain IN878_RS12845 PF00448 SRP54-type protein, GTPase domain IN878_RS12855 PF06611 Protein of unknown function (DUF1145) IN878_RS12860 PF10694 Protein of unknown function (DUF2500) IN878_RS12865 PF07947 YhhN family IN878_RS12870 PF00403 Heavy-metal-associated domain IN878_RS12875 PF01206 Sulfurtransferase TusA IN878_RS12880 PF02592 Putative vitamin uptake transporter IN878_RS12885 PF08786 DcrB IN878_RS12890 PF07690 Major Facilitator Superfamily IN878_RS12895 PF01594 AI-2E family transporter IN878_RS12900 PF01648 4'-phosphopantetheinyl transferase superfamily IN878_RS12905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS12910 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS12915 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS12920 PF00005 ABC transporter IN878_RS12925 PF00005 ABC transporter IN878_RS12930 PF01402 Ribbon-helix-helix protein, copG family IN878_RS12930 PF08753 NikR C terminal nickel binding domain IN878_RS12935 PF14220 Domain of unknown function (DUF4329) IN878_RS12935 PF03527 RHS protein IN878_RS12935 PF05593 RHS Repeat IN878_RS12940 PF15631 NTF2 fold immunity protein IN878_RS12950 PF01609 Transposase DDE domain IN878_RS12950 PF13808 DDE_Tnp_1-associated IN878_RS12960 PF00005 ABC transporter IN878_RS12965 PF13533 Biotin-lipoyl like IN878_RS12970 PF13258 Domain of unknown function (DUF4049) IN878_RS12975 PF13258 Domain of unknown function (DUF4049) IN878_RS12980 PF10951 Protein of unknown function (DUF2776) IN878_RS13000 PF05717 IS66 Orf2 like protein IN878_RS13015 PF00486 Transcriptional regulatory protein, C terminal IN878_RS13015 PF00072 Response regulator receiver domain IN878_RS13020 PF05425 Copper resistance protein D IN878_RS13025 PF04234 CopC domain IN878_RS13030 PF05275 Copper resistance protein B precursor (CopB) IN878_RS13035 PF07731 Multicopper oxidase IN878_RS13035 PF07732 Multicopper oxidase IN878_RS13035 PF00394 Multicopper oxidase IN878_RS13050 PF01527 Transposase IN878_RS13050 PF13276 HTH-like domain IN878_RS13050 PF00665 Integrase core domain IN878_RS13055 PF05717 IS66 Orf2 like protein IN878_RS13060 PF13817 IS66 C-terminal element IN878_RS13060 PF03050 Transposase IS66 family IN878_RS13060 PF13007 Transposase C of IS166 homeodomain IN878_RS13060 PF13005 zinc-finger binding domain of transposase IS66 IN878_RS13065 PF08525 Opacity-associated protein A N-terminal motif IN878_RS13065 PF01476 LysM domain IN878_RS13065 PF01551 Peptidase family M23 IN878_RS13075 PF04945 YHS domain IN878_RS13085 PF00873 AcrB/AcrD/AcrF family IN878_RS13090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS13095 PF11604 Copper binding periplasmic protein CusF IN878_RS13100 PF02321 Outer membrane efflux protein IN878_RS13105 PF00072 Response regulator receiver domain IN878_RS13105 PF00486 Transcriptional regulatory protein, C terminal IN878_RS13110 PF00672 HAMP domain IN878_RS13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS13110 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS13150 PF11426 Tn7 transposition regulator TnsC IN878_RS13150 PF13401 AAA domain IN878_RS13155 PF00665 Integrase core domain IN878_RS13160 PF08721 TnsA endonuclease C terminal IN878_RS13160 PF08722 TnsA endonuclease N terminal IN878_RS13170 PF01384 Phosphate transporter family IN878_RS13175 PF10625 Universal stress protein B (UspB) IN878_RS13180 PF00582 Universal stress protein family IN878_RS13185 PF00854 POT family IN878_RS13190 PF04445 Putative SAM-dependent methyltransferase IN878_RS13195 PF01432 Peptidase family M3 IN878_RS13200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IN878_RS13205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IN878_RS13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS13215 PF01022 Bacterial regulatory protein, arsR family IN878_RS13220 PF02040 Arsenical pump membrane protein IN878_RS13225 PF03960 ArsC family IN878_RS13235 PF03843 Outer membrane lipoprotein Slp family IN878_RS13240 PF00196 Bacterial regulatory proteins, luxR family IN878_RS13245 PF02308 MgtC family IN878_RS13250 PF06411 HdeA/HdeB family IN878_RS13255 PF06411 HdeA/HdeB family IN878_RS13260 PF03729 Short repeat of unknown function (DUF308) IN878_RS13265 PF00196 Bacterial regulatory proteins, luxR family IN878_RS13275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS13275 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS13280 PF00873 AcrB/AcrD/AcrF family IN878_RS13285 PF12833 Helix-turn-helix domain IN878_RS13290 PF12833 Helix-turn-helix domain IN878_RS13295 PF00282 Pyridoxal-dependent decarboxylase conserved domain IN878_RS13300 PF14376 Haem-binding domain IN878_RS13300 PF03150 Di-haem cytochrome c peroxidase IN878_RS13300 PF00034 Cytochrome c IN878_RS13305 PF01204 Trehalase IN878_RS13310 PF00196 Bacterial regulatory proteins, luxR family IN878_RS13315 PF03466 LysR substrate binding domain IN878_RS13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS13320 PF03631 Virulence factor BrkB IN878_RS13325 PF00083 Sugar (and other) transporter IN878_RS13325 PF07690 Major Facilitator Superfamily IN878_RS13330 PF05170 AsmA family IN878_RS13335 PF00563 EAL domain IN878_RS13340 PF00294 pfkB family carbohydrate kinase IN878_RS13345 PF00675 Insulinase (Peptidase family M16) IN878_RS13345 PF05193 Peptidase M16 inactive domain IN878_RS13350 PF00375 Sodium:dicarboxylate symporter family IN878_RS13355 PF00672 HAMP domain IN878_RS13355 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS13355 PF17154 Gammaproteobacterial periplasmic sensor domain IN878_RS13355 PF00563 EAL domain IN878_RS13360 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) IN878_RS13365 PF01270 Glycosyl hydrolases family 8 IN878_RS13370 PF03170 Bacterial cellulose synthase subunit IN878_RS13375 PF00535 Glycosyl transferase family 2 IN878_RS13375 PF07238 PilZ domain IN878_RS13375 PF03552 Cellulose synthase IN878_RS13380 PF06564 Cellulose biosynthesis protein BcsQ IN878_RS13385 PF10945 Cellulose biosynthesis protein BcsR IN878_RS13390 PF10995 Cellulose biosynthesis GIL IN878_RS13395 PF11120 Cellulose biosynthesis protein BcsF IN878_RS13400 PF11658 Cellulose biosynthesis protein BcsG IN878_RS13405 PF13940 Toxin Ldr, type I toxin-antitoxin system IN878_RS13410 PF03222 Tryptophan/tyrosine permease family IN878_RS13415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS13415 PF00005 ABC transporter IN878_RS13420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS13420 PF00005 ABC transporter IN878_RS13425 PF12911 N-terminal TM domain of oligopeptide transport permease C IN878_RS13425 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS13435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS13445 PF08019 Phosphoethanolamine transferase EptA/EptB IN878_RS13445 PF00884 Sulfatase IN878_RS13450 PF07690 Major Facilitator Superfamily IN878_RS13455 PF03797 Autotransporter beta-domain IN878_RS13460 PF03352 Methyladenine glycosylase IN878_RS13465 PF00583 Acetyltransferase (GNAT) family IN878_RS13470 PF00384 Molybdopterin oxidoreductase IN878_RS13470 PF18364 Molybdopterin oxidoreductase N-terminal domain IN878_RS13470 PF01568 Molydopterin dinucleotide binding domain IN878_RS13475 PF13488 Glycine zipper IN878_RS13475 PF00691 OmpA family IN878_RS13480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IN878_RS13480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IN878_RS13485 PF11254 Protein of unknown function (DUF3053) IN878_RS13490 PF01381 Helix-turn-helix IN878_RS13495 PF00313 'Cold-shock' DNA-binding domain IN878_RS13500 PF01848 Hok/gef family IN878_RS13510 PF05746 DALR anticodon binding domain IN878_RS13510 PF02092 Glycyl-tRNA synthetase beta subunit IN878_RS13515 PF02091 Glycyl-tRNA synthetase alpha subunit IN878_RS13520 PF13983 YsaB-like lipoprotein IN878_RS13525 PF01757 Acyltransferase family IN878_RS13530 PF05360 yiaA/B two helix domain IN878_RS13535 PF05360 yiaA/B two helix domain IN878_RS13540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS13540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IN878_RS13550 PF13407 Periplasmic binding protein domain IN878_RS13555 PF00005 ABC transporter IN878_RS13560 PF02653 Branched-chain amino acid transport system / permease component IN878_RS13565 PF12833 Helix-turn-helix domain IN878_RS13570 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IN878_RS13575 PF00128 Alpha amylase, catalytic domain IN878_RS13580 PF00155 Aminotransferase class I and II IN878_RS13585 PF13247 4Fe-4S dicluster domain IN878_RS13590 PF01614 Bacterial transcriptional regulator IN878_RS13590 PF09339 IclR helix-turn-helix domain IN878_RS13595 PF02615 Malate/L-lactate dehydrogenase IN878_RS13600 PF04074 YhcH/YjgK/YiaL IN878_RS13605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IN878_RS13610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IN878_RS13615 PF03480 Bacterial extracellular solute-binding protein, family 7 IN878_RS13620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS13620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IN878_RS13625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IN878_RS13630 PF01261 Xylose isomerase-like TIM barrel IN878_RS13635 PF00596 Class II Aldolase and Adducin N-terminal domain IN878_RS13650 PF06629 MltA-interacting protein MipA IN878_RS13655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS13655 PF03466 LysR substrate binding domain IN878_RS13660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS13660 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS13665 PF11742 Protein of unknown function (DUF3302) IN878_RS13675 PF00171 Aldehyde dehydrogenase family IN878_RS13680 PF00465 Iron-containing alcohol dehydrogenase IN878_RS13685 PF00009 Elongation factor Tu GTP binding domain IN878_RS13685 PF09107 Elongation factor SelB, winged helix IN878_RS13685 PF03144 Elongation factor Tu domain 2 IN878_RS13685 PF09106 Elongation factor SelB, winged helix IN878_RS13690 PF03841 L-seryl-tRNA selenium transferase IN878_RS13690 PF12390 Selenocysteine synthase N terminal IN878_RS13695 PF13417 Glutathione S-transferase, N-terminal domain IN878_RS13695 PF00043 Glutathione S-transferase, C-terminal domain IN878_RS13700 PF03527 RHS protein IN878_RS13700 PF15606 Bacterial toxin 34 IN878_RS13700 PF05593 RHS Repeat IN878_RS13710 PF15596 Immunity protein 57 IN878_RS13715 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS13715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS13720 PF11742 Protein of unknown function (DUF3302) IN878_RS13725 PF02378 Phosphotransferase system, EIIC IN878_RS13725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS13725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS13730 PF01232 Mannitol dehydrogenase Rossmann domain IN878_RS13730 PF08125 Mannitol dehydrogenase C-terminal domain IN878_RS13735 PF05068 Mannitol repressor IN878_RS13745 PF10928 Protein of unknown function (DUF2810) IN878_RS13750 PF02652 L-lactate permease IN878_RS13755 PF07729 FCD domain IN878_RS13755 PF00392 Bacterial regulatory proteins, gntR family IN878_RS13760 PF01070 FMN-dependent dehydrogenase IN878_RS13765 PF00588 SpoU rRNA Methylase family IN878_RS13770 PF06426 Serine acetyltransferase, N-terminal IN878_RS13770 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS13775 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IN878_RS13775 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IN878_RS13780 PF02556 Preprotein translocase subunit SecB IN878_RS13785 PF00462 Glutaredoxin IN878_RS13790 PF00581 Rhodanese-like domain IN878_RS13795 PF01676 Metalloenzyme superfamily IN878_RS13795 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IN878_RS13800 PF01551 Peptidase family M23 IN878_RS13805 PF04748 Divergent polysaccharide deacetylase IN878_RS13810 PF00535 Glycosyl transferase family 2 IN878_RS13815 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS13815 PF00107 Zinc-binding dehydrogenase IN878_RS13820 PF00155 Aminotransferase class I and II IN878_RS13825 PF01370 NAD dependent epimerase/dehydratase family IN878_RS13830 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IN878_RS13835 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IN878_RS13840 PF04932 O-Antigen ligase IN878_RS13845 PF00534 Glycosyl transferases group 1 IN878_RS13855 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) IN878_RS13860 PF08437 Glycosyl transferase family 8 C-terminal IN878_RS13860 PF01501 Glycosyl transferase family 8 IN878_RS13865 PF08437 Glycosyl transferase family 8 C-terminal IN878_RS13865 PF01501 Glycosyl transferase family 8 IN878_RS13870 PF00534 Glycosyl transferases group 1 IN878_RS13870 PF13439 Glycosyltransferase Family 4 IN878_RS13875 PF08437 Glycosyl transferase family 8 C-terminal IN878_RS13875 PF01501 Glycosyl transferase family 8 IN878_RS13885 PF13439 Glycosyltransferase Family 4 IN878_RS13885 PF00534 Glycosyl transferases group 1 IN878_RS13890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IN878_RS13895 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IN878_RS13900 PF01467 Cytidylyltransferase-like IN878_RS13905 PF06827 Zinc finger found in FPG and IleRS IN878_RS13905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IN878_RS13905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IN878_RS13910 PF00471 Ribosomal protein L33 IN878_RS13915 PF00830 Ribosomal L28 family IN878_RS13920 PF04002 RadC-like JAB domain IN878_RS13925 PF02441 Flavoprotein IN878_RS13925 PF04127 DNA / pantothenate metabolism flavoprotein IN878_RS13930 PF00692 dUTPase IN878_RS13935 PF00440 Bacterial regulatory proteins, tetR family IN878_RS13940 PF00156 Phosphoribosyl transferase domain IN878_RS13945 PF01138 3' exoribonuclease family, domain 1 IN878_RS13945 PF03725 3' exoribonuclease family, domain 2 IN878_RS13950 PF03755 YicC-like family, N-terminal region IN878_RS13950 PF08340 Domain of unknown function (DUF1732) IN878_RS13960 PF03458 UPF0126 domain IN878_RS13965 PF01653 NAD-dependent DNA ligase adenylation domain IN878_RS13965 PF03120 NAD-dependent DNA ligase OB-fold domain IN878_RS13970 PF00625 Guanylate kinase IN878_RS13975 PF01192 RNA polymerase Rpb6 IN878_RS13980 PF13291 ACT domain IN878_RS13980 PF02824 TGS domain IN878_RS13980 PF04607 Region found in RelA / SpoT proteins IN878_RS13985 PF12105 SpoU, rRNA methylase, C-terminal IN878_RS13985 PF00588 SpoU rRNA Methylase family IN878_RS13990 PF00270 DEAD/DEAH box helicase IN878_RS13990 PF17191 RecG wedge domain IN878_RS13990 PF00271 Helicase conserved C-terminal domain IN878_RS13995 PF03616 Sodium/glutamate symporter IN878_RS14000 PF00860 Permease family IN878_RS14005 PF05170 AsmA family IN878_RS14010 PF13802 Galactose mutarotase-like IN878_RS14010 PF01055 Glycosyl hydrolases family 31 IN878_RS14025 PF07690 Major Facilitator Superfamily IN878_RS14030 PF00892 EamA-like transporter family IN878_RS14035 PF03180 NLPA lipoprotein IN878_RS14045 PF07690 Major Facilitator Superfamily IN878_RS14050 PF06711 Protein of unknown function (DUF1198) IN878_RS14055 PF00860 Permease family IN878_RS14060 PF13382 Adenine deaminase C-terminal domain IN878_RS14060 PF01979 Amidohydrolase family IN878_RS14065 PF07690 Major Facilitator Superfamily IN878_RS14070 PF07690 Major Facilitator Superfamily IN878_RS14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS14075 PF07730 Histidine kinase IN878_RS14075 PF05231 MASE1 IN878_RS14080 PF00196 Bacterial regulatory proteins, luxR family IN878_RS14080 PF00072 Response regulator receiver domain IN878_RS14085 PF01842 ACT domain IN878_RS14090 PF00205 Thiamine pyrophosphate enzyme, central domain IN878_RS14090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS14090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IN878_RS14095 PF08049 IlvB leader peptide IN878_RS14100 PF13939 Toxin TisB, type I toxin-antitoxin system IN878_RS14105 PF07690 Major Facilitator Superfamily IN878_RS14115 PF02656 Domain of unknown function (DUF202) IN878_RS14120 PF02656 Domain of unknown function (DUF202) IN878_RS14140 PF02311 AraC-like ligand binding domain IN878_RS14140 PF12833 Helix-turn-helix domain IN878_RS14150 PF00367 phosphotransferase system, EIIB IN878_RS14150 PF02378 Phosphotransferase system, EIIC IN878_RS14155 PF07702 UTRA domain IN878_RS14155 PF00392 Bacterial regulatory proteins, gntR family IN878_RS14160 PF06826 Predicted Permease Membrane Region IN878_RS14160 PF02080 TrkA-C domain IN878_RS14165 PF00011 Hsp20/alpha crystallin family IN878_RS14170 PF00011 Hsp20/alpha crystallin family IN878_RS14175 PF07119 Protein of unknown function (DUF1375) IN878_RS14180 PF07676 WD40-like Beta Propeller Repeat IN878_RS14180 PF12566 Protein of unknown function (DUF3748) IN878_RS14185 PF01494 FAD binding domain IN878_RS14190 PF07690 Major Facilitator Superfamily IN878_RS14195 PF13378 Enolase C-terminal domain-like IN878_RS14195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IN878_RS14200 PF01081 KDPG and KHG aldolase IN878_RS14205 PF05035 2-keto-3-deoxy-galactonokinase IN878_RS14210 PF07729 FCD domain IN878_RS14210 PF00392 Bacterial regulatory proteins, gntR family IN878_RS14225 PF06078 Bacterial protein of unknown function (DUF937) IN878_RS14230 PF01751 Toprim domain IN878_RS14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS14230 PF18053 DNA gyrase B subunit insert domain IN878_RS14230 PF00204 DNA gyrase B IN878_RS14230 PF00986 DNA gyrase B subunit, carboxyl terminus IN878_RS14235 PF02463 RecF/RecN/SMC N terminal domain IN878_RS14240 PF00712 DNA polymerase III beta subunit, N-terminal domain IN878_RS14240 PF02767 DNA polymerase III beta subunit, central domain IN878_RS14240 PF02768 DNA polymerase III beta subunit, C-terminal domain IN878_RS14245 PF08299 Bacterial dnaA protein helix-turn-helix IN878_RS14245 PF11638 DnaA N-terminal domain IN878_RS14245 PF00308 Bacterial dnaA protein IN878_RS14255 PF00468 Ribosomal protein L34 IN878_RS14260 PF00825 Ribonuclease P IN878_RS14265 PF01809 Putative membrane protein insertion efficiency factor IN878_RS14270 PF14849 YidC periplasmic domain IN878_RS14270 PF02096 60Kd inner membrane protein IN878_RS14275 PF10396 GTP-binding protein TrmE N-terminus IN878_RS14275 PF01926 50S ribosome-binding GTPase IN878_RS14275 PF12631 MnmE helical domain IN878_RS14280 PF08053 Tryptophanase operon leader peptide IN878_RS14285 PF01212 Beta-eliminating lyase IN878_RS14290 PF03222 Tryptophan/tyrosine permease family IN878_RS14295 PF07690 Major Facilitator Superfamily IN878_RS14300 PF03466 LysR substrate binding domain IN878_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS14310 PF03358 NADPH-dependent FMN reductase IN878_RS14315 PF00860 Permease family IN878_RS14320 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS14330 PF03691 Uncharacterised protein family (UPF0167) IN878_RS14335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IN878_RS14340 PF00756 Putative esterase IN878_RS14340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IN878_RS14345 PF11471 Maltoporin periplasmic N-terminal extension IN878_RS14345 PF02264 LamB porin IN878_RS14350 PF00232 Glycosyl hydrolase family 1 IN878_RS14355 PF02378 Phosphotransferase system, EIIC IN878_RS14355 PF00367 phosphotransferase system, EIIB IN878_RS14355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IN878_RS14360 PF00874 PRD domain IN878_RS14360 PF03123 CAT RNA binding domain IN878_RS14365 PF01895 PhoU domain IN878_RS14370 PF00005 ABC transporter IN878_RS14375 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS14380 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS14385 PF12849 PBP superfamily domain IN878_RS14390 PF01380 SIS domain IN878_RS14395 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS14395 PF14602 Hexapeptide repeat of succinyl-transferase IN878_RS14395 PF12804 MobA-like NTP transferase domain IN878_RS14400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IN878_RS14400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IN878_RS14405 PF02874 ATP synthase alpha/beta family, beta-barrel domain IN878_RS14405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IN878_RS14410 PF00231 ATP synthase IN878_RS14415 PF02874 ATP synthase alpha/beta family, beta-barrel domain IN878_RS14415 PF00306 ATP synthase alpha/beta chain, C terminal domain IN878_RS14415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IN878_RS14420 PF00213 ATP synthase delta (OSCP) subunit IN878_RS14425 PF00430 ATP synthase B/B' CF(0) IN878_RS14430 PF00137 ATP synthase subunit C IN878_RS14435 PF00119 ATP synthase A chain IN878_RS14440 PF03899 ATP synthase I chain IN878_RS14445 PF02527 rRNA small subunit methyltransferase G IN878_RS14450 PF13932 GidA associated domain IN878_RS14450 PF01134 Glucose inhibited division protein A IN878_RS14455 PF00258 Flavodoxin IN878_RS14460 PF01037 Lrp/AsnC ligand binding domain IN878_RS14465 PF03590 Aspartate-ammonia ligase IN878_RS14470 PF05762 VWA domain containing CoxE-like protein IN878_RS14475 PF17868 AAA lid domain IN878_RS14475 PF12592 Protein of unknown function (DUF3763) IN878_RS14475 PF07728 AAA domain (dynein-related subfamily) IN878_RS14480 PF02705 K+ potassium transporter IN878_RS14485 PF05025 RbsD / FucU transport protein family IN878_RS14490 PF00005 ABC transporter IN878_RS14495 PF02653 Branched-chain amino acid transport system / permease component IN878_RS14500 PF13407 Periplasmic binding protein domain IN878_RS14505 PF00294 pfkB family carbohydrate kinase IN878_RS14510 PF00356 Bacterial regulatory proteins, lacI family IN878_RS14515 PF07690 Major Facilitator Superfamily IN878_RS14520 PF00392 Bacterial regulatory proteins, gntR family IN878_RS14520 PF07729 FCD domain IN878_RS14555 PF03466 LysR substrate binding domain IN878_RS14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS14560 PF04219 Protein of unknown function, DUF IN878_RS14565 PF13335 Magnesium chelatase, subunit ChlI C-terminal IN878_RS14565 PF01078 Magnesium chelatase, subunit ChlI IN878_RS14570 PF08046 IlvGEDA operon leader peptide IN878_RS14580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IN878_RS14580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS14580 PF00205 Thiamine pyrophosphate enzyme, central domain IN878_RS14590 PF01063 Amino-transferase class IV IN878_RS14595 PF00920 Dehydratase family IN878_RS14600 PF00585 C-terminal regulatory domain of Threonine dehydratase IN878_RS14600 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS14605 PF03466 LysR substrate binding domain IN878_RS14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS14610 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IN878_RS14610 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IN878_RS14625 PF00580 UvrD/REP helicase N-terminal domain IN878_RS14625 PF13361 UvrD-like helicase C-terminal domain IN878_RS14630 PF02541 Ppx/GppA phosphatase family IN878_RS14635 PF00271 Helicase conserved C-terminal domain IN878_RS14635 PF00270 DEAD/DEAH box helicase IN878_RS14640 PF00085 Thioredoxin IN878_RS14650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IN878_RS14650 PF07498 Rho termination factor, N-terminal domain IN878_RS14650 PF07497 Rho termination factor, RNA-binding domain IN878_RS14655 PF00953 Glycosyl transferase family 4 IN878_RS14660 PF02706 Chain length determinant protein IN878_RS14665 PF02350 UDP-N-acetylglucosamine 2-epimerase IN878_RS14670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IN878_RS14670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IN878_RS14670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IN878_RS14675 PF16363 GDP-mannose 4,6 dehydratase IN878_RS14680 PF00483 Nucleotidyl transferase IN878_RS14690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IN878_RS14695 PF01943 Polysaccharide biosynthesis protein IN878_RS14700 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 IN878_RS14705 PF06899 WzyE protein, O-antigen assembly polymerase IN878_RS14710 PF03808 Glycosyl transferase WecB/TagA/CpsF family IN878_RS14715 PF00324 Amino acid permease IN878_RS14740 PF13186 Iron-sulfur cluster-binding domain IN878_RS14740 PF04055 Radical SAM superfamily IN878_RS14745 PF00884 Sulfatase IN878_RS14750 PF07719 Tetratricopeptide repeat IN878_RS14750 PF07219 HemY protein N-terminus IN878_RS14755 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IN878_RS14760 PF02602 Uroporphyrinogen-III synthase HemD IN878_RS14765 PF03900 Porphobilinogen deaminase, C-terminal domain IN878_RS14765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IN878_RS14770 PF01295 Adenylate cyclase, class-I IN878_RS14770 PF12633 Adenylate cyclase NT domain IN878_RS14775 PF01491 Frataxin-like domain IN878_RS14780 PF13627 Prokaryotic lipoprotein-attachment site IN878_RS14785 PF01678 Diaminopimelate epimerase IN878_RS14790 PF04340 Protein of unknown function, DUF484 IN878_RS14795 PF00589 Phage integrase family IN878_RS14795 PF02899 Phage integrase, N-terminal SAM-like domain IN878_RS14800 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS14805 PF00580 UvrD/REP helicase N-terminal domain IN878_RS14805 PF13361 UvrD-like helicase C-terminal domain IN878_RS14810 PF09992 Phosphodiester glycosidase IN878_RS14815 PF01544 CorA-like Mg2+ transporter protein IN878_RS14820 PF10947 Protein of unknown function (DUF2628) IN878_RS14830 PF00892 EamA-like transporter family IN878_RS14835 PF03061 Thioesterase superfamily IN878_RS14840 PF02253 Phospholipase A1 IN878_RS14845 PF16124 RecQ zinc-binding IN878_RS14845 PF00271 Helicase conserved C-terminal domain IN878_RS14845 PF00270 DEAD/DEAH box helicase IN878_RS14845 PF00570 HRDC domain IN878_RS14845 PF09382 RQC domain IN878_RS14850 PF01810 LysE type translocator IN878_RS14855 PF01810 LysE type translocator IN878_RS14860 PF12146 Serine aminopeptidase, S33 IN878_RS14870 PF00892 EamA-like transporter family IN878_RS14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS14875 PF03466 LysR substrate binding domain IN878_RS14880 PF08267 Cobalamin-independent synthase, N-terminal domain IN878_RS14880 PF01717 Cobalamin-independent synthase, Catalytic domain IN878_RS14885 PF01738 Dienelactone hydrolase family IN878_RS14890 PF01048 Phosphorylase superfamily IN878_RS14895 PF02646 RmuC family IN878_RS14900 PF01209 ubiE/COQ5 methyltransferase family IN878_RS14905 PF02036 SCP-2 sterol transfer family IN878_RS14910 PF03109 ABC1 family IN878_RS14915 PF02416 mttA/Hcf106 family IN878_RS14925 PF00902 Sec-independent protein translocase protein (TatC) IN878_RS14930 PF01026 TatD related DNase IN878_RS14935 PF02357 Transcription termination factor nusG IN878_RS14940 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IN878_RS14945 PF00175 Oxidoreductase NAD-binding domain IN878_RS14945 PF00970 Oxidoreductase FAD-binding domain IN878_RS14950 PF02803 Thiolase, C-terminal domain IN878_RS14950 PF00108 Thiolase, N-terminal domain IN878_RS14955 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS14955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IN878_RS14955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IN878_RS14960 PF00557 Metallopeptidase family M24 IN878_RS14965 PF01205 Uncharacterized protein family UPF0029 IN878_RS14965 PF09186 Domain of unknown function (DUF1949) IN878_RS14970 PF02386 Cation transport protein IN878_RS14975 PF12724 Flavodoxin domain IN878_RS15005 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IN878_RS15010 PF12804 MobA-like NTP transferase domain IN878_RS15015 PF06288 Protein of unknown function (DUF1040) IN878_RS15020 PF01636 Phosphotransferase enzyme family IN878_RS15025 PF01323 DSBA-like thioredoxin domain IN878_RS15030 PF06097 Bacterial protein of unknown function (DUF945) IN878_RS15035 PF01553 Acyltransferase IN878_RS15040 PF01367 5'-3' exonuclease, C-terminal SAM fold IN878_RS15040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IN878_RS15040 PF00476 DNA polymerase family A IN878_RS15040 PF01612 3'-5' exonuclease IN878_RS15045 PF01926 50S ribosome-binding GTPase IN878_RS15050 PF04220 Der GTPase activator (YihI) IN878_RS15055 PF04055 Radical SAM superfamily IN878_RS15055 PF06969 HemN C-terminal domain IN878_RS15065 PF00158 Sigma-54 interaction domain IN878_RS15065 PF00072 Response regulator receiver domain IN878_RS15065 PF02954 Bacterial regulatory protein, Fis family IN878_RS15070 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS15070 PF00989 PAS fold IN878_RS15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS15075 PF03951 Glutamine synthetase, beta-Grasp domain IN878_RS15075 PF00120 Glutamine synthetase, catalytic domain IN878_RS15080 PF00679 Elongation factor G C-terminus IN878_RS15080 PF00009 Elongation factor Tu GTP binding domain IN878_RS15080 PF03144 Elongation factor Tu domain 2 IN878_RS15085 PF00392 Bacterial regulatory proteins, gntR family IN878_RS15085 PF07702 UTRA domain IN878_RS15090 PF01261 Xylose isomerase-like TIM barrel IN878_RS15095 PF07690 Major Facilitator Superfamily IN878_RS15100 PF06178 Oligogalacturonate-specific porin protein (KdgM) IN878_RS15115 PF01055 Glycosyl hydrolases family 31 IN878_RS15120 PF01263 Aldose 1-epimerase IN878_RS15130 PF01791 DeoC/LacD family aldolase IN878_RS15135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IN878_RS15135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IN878_RS15140 PF00294 pfkB family carbohydrate kinase IN878_RS15145 PF00455 DeoR C terminal sensor domain IN878_RS15145 PF08220 DeoR-like helix-turn-helix domain IN878_RS15150 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS15155 PF03631 Virulence factor BrkB IN878_RS15160 PF02580 D-Tyr-tRNA(Tyr) deacylase IN878_RS15165 PF00583 Acetyltransferase (GNAT) family IN878_RS15165 PF09500 Putative thioesterase (yiiD_Cterm) IN878_RS15170 PF01402 Ribbon-helix-helix protein, copG family IN878_RS15180 PF04216 Protein involved in formate dehydrogenase formation IN878_RS15185 PF01292 Prokaryotic cytochrome b561 IN878_RS15190 PF09163 Formate dehydrogenase N, transmembrane IN878_RS15190 PF13247 4Fe-4S dicluster domain IN878_RS15200 PF02634 FdhD/NarQ family IN878_RS15205 PF12889 Protein of unknown function (DUF3829) IN878_RS15210 PF08279 HTH domain IN878_RS15210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS15215 PF05343 M42 glutamyl aminopeptidase IN878_RS15220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS15220 PF02378 Phosphotransferase system, EIIC IN878_RS15225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS15230 PF05336 L-rhamnose mutarotase IN878_RS15235 PF00596 Class II Aldolase and Adducin N-terminal domain IN878_RS15240 PF06134 L-rhamnose isomerase (RhaA) IN878_RS15245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IN878_RS15245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS15250 PF12833 Helix-turn-helix domain IN878_RS15250 PF02311 AraC-like ligand binding domain IN878_RS15255 PF02311 AraC-like ligand binding domain IN878_RS15255 PF12833 Helix-turn-helix domain IN878_RS15260 PF06379 L-rhamnose-proton symport protein (RhaT) IN878_RS15265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IN878_RS15265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IN878_RS15270 PF03812 2-keto-3-deoxygluconate permease IN878_RS15275 PF03475 3-alpha domain IN878_RS15275 PF03473 MOSC domain IN878_RS15280 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS15280 PF16527 Two-component sensor protein CpxA, periplasmic domain IN878_RS15280 PF00672 HAMP domain IN878_RS15285 PF00486 Transcriptional regulatory protein, C terminal IN878_RS15285 PF00072 Response regulator receiver domain IN878_RS15290 PF07813 LTXXQ motif family protein IN878_RS15295 PF00589 Phage integrase family IN878_RS15295 PF02899 Phage integrase, N-terminal SAM-like domain IN878_RS15335 PF05840 Bacteriophage replication gene A protein (GPA) IN878_RS15340 PF06114 IrrE N-terminal-like domain IN878_RS15445 PF07484 Phage Tail Collar Domain IN878_RS15450 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IN878_RS15455 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IN878_RS15465 PF00239 Resolvase, N terminal domain IN878_RS15465 PF02796 Helix-turn-helix domain of resolvase IN878_RS15505 PF04606 Ogr/Delta-like zinc finger IN878_RS15510 PF01545 Cation efflux family IN878_RS15510 PF16916 Dimerisation domain of Zinc Transporter IN878_RS15515 PF00365 Phosphofructokinase IN878_RS15525 PF02611 CDP-diacylglycerol pyrophosphatase IN878_RS15530 PF00121 Triosephosphate isomerase IN878_RS15535 PF07305 Protein of unknown function (DUF1454) IN878_RS15540 PF05656 Protein of unknown function (DUF805) IN878_RS15545 PF04175 Protein of unknown function (DUF406) IN878_RS15550 PF00582 Universal stress protein family IN878_RS15555 PF00970 Oxidoreductase FAD-binding domain IN878_RS15555 PF00175 Oxidoreductase NAD-binding domain IN878_RS15560 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IN878_RS15565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IN878_RS15565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS15570 PF00230 Major intrinsic protein IN878_RS15575 PF06005 Cell division protein ZapB IN878_RS15580 PF03737 Aldolase/RraA IN878_RS15585 PF01040 UbiA prenyltransferase family IN878_RS15590 PF10431 C-terminal, D2-small domain, of ClpB protein IN878_RS15590 PF07724 AAA domain (Cdc48 subfamily) IN878_RS15590 PF00004 ATPase family associated with various cellular activities (AAA) IN878_RS15595 PF00227 Proteasome subunit IN878_RS15600 PF05036 Sporulation related domain IN878_RS15605 PF00356 Bacterial regulatory proteins, lacI family IN878_RS15610 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IN878_RS15610 PF00271 Helicase conserved C-terminal domain IN878_RS15610 PF17764 3′ DNA-binding domain (3′BD) IN878_RS15610 PF18074 Primosomal protein N C-terminal domain IN878_RS15610 PF00270 DEAD/DEAH box helicase IN878_RS15615 PF01197 Ribosomal protein L31 IN878_RS15620 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family IN878_RS15625 PF01340 Met Apo-repressor, MetJ IN878_RS15630 PF01053 Cys/Met metabolism PLP-dependent enzyme IN878_RS15635 PF03447 Homoserine dehydrogenase, NAD binding domain IN878_RS15635 PF00696 Amino acid kinase family IN878_RS15635 PF00742 Homoserine dehydrogenase IN878_RS15640 PF02219 Methylenetetrahydrofolate reductase IN878_RS15645 PF00141 Peroxidase IN878_RS15650 PF00892 EamA-like transporter family IN878_RS15655 PF06940 Domain of unknown function (DUF1287) IN878_RS15660 PF00465 Iron-containing alcohol dehydrogenase IN878_RS15665 PF00923 Transaldolase/Fructose-6-phosphate aldolase IN878_RS15670 PF00381 PTS HPr component phosphorylation site IN878_RS15670 PF02896 PEP-utilising enzyme, TIM barrel domain IN878_RS15670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS15670 PF00391 PEP-utilising enzyme, mobile domain IN878_RS15670 PF05524 PEP-utilising enzyme, N-terminal IN878_RS15680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS15685 PF01228 Glycine radical IN878_RS15685 PF02901 Pyruvate formate lyase-like IN878_RS15690 PF04055 Radical SAM superfamily IN878_RS15695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS15700 PF12833 Helix-turn-helix domain IN878_RS15705 PF00884 Sulfatase IN878_RS15710 PF00311 Phosphoenolpyruvate carboxylase IN878_RS15715 PF01546 Peptidase family M20/M25/M40 IN878_RS15715 PF07687 Peptidase dimerisation domain IN878_RS15720 PF01118 Semialdehyde dehydrogenase, NAD binding domain IN878_RS15720 PF02774 Semialdehyde dehydrogenase, dimerisation domain IN878_RS15725 PF00696 Amino acid kinase family IN878_RS15730 PF14698 Argininosuccinate lyase C-terminal IN878_RS15730 PF00206 Lyase IN878_RS15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS15735 PF03466 LysR substrate binding domain IN878_RS15740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IN878_RS15740 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS15745 PF00440 Bacterial regulatory proteins, tetR family IN878_RS15750 PF07226 Protein of unknown function (DUF1422) IN878_RS15755 PF05958 tRNA (Uracil-5-)-methyltransferase IN878_RS15760 PF00593 TonB dependent receptor IN878_RS15760 PF07715 TonB-dependent Receptor Plug Domain IN878_RS15765 PF01177 Asp/Glu/Hydantoin racemase IN878_RS15790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IN878_RS15790 PF01565 FAD binding domain IN878_RS15795 PF02237 Biotin protein ligase C terminal domain IN878_RS15795 PF03099 Biotin/lipoate A/B protein ligase family IN878_RS15795 PF08279 HTH domain IN878_RS15800 PF00485 Phosphoribulokinase / Uridine kinase family IN878_RS15825 PF03144 Elongation factor Tu domain 2 IN878_RS15825 PF00009 Elongation factor Tu GTP binding domain IN878_RS15825 PF03143 Elongation factor Tu C-terminal domain IN878_RS15830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IN878_RS15835 PF00467 KOW motif IN878_RS15835 PF02357 Transcription termination factor nusG IN878_RS15840 PF03946 Ribosomal protein L11, N-terminal domain IN878_RS15840 PF00298 Ribosomal protein L11, RNA binding domain IN878_RS15845 PF00687 Ribosomal protein L1p/L10e family IN878_RS15850 PF00466 Ribosomal protein L10 IN878_RS15855 PF16320 Ribosomal protein L7/L12 dimerisation domain IN878_RS15855 PF00542 Ribosomal protein L7/L12 C-terminal domain IN878_RS15860 PF04560 RNA polymerase Rpb2, domain 7 IN878_RS15860 PF04563 RNA polymerase beta subunit IN878_RS15860 PF04561 RNA polymerase Rpb2, domain 2 IN878_RS15860 PF04565 RNA polymerase Rpb2, domain 3 IN878_RS15860 PF10385 RNA polymerase beta subunit external 1 domain IN878_RS15860 PF00562 RNA polymerase Rpb2, domain 6 IN878_RS15865 PF04997 RNA polymerase Rpb1, domain 1 IN878_RS15865 PF00623 RNA polymerase Rpb1, domain 2 IN878_RS15865 PF04983 RNA polymerase Rpb1, domain 3 IN878_RS15865 PF05000 RNA polymerase Rpb1, domain 4 IN878_RS15865 PF04998 RNA polymerase Rpb1, domain 5 IN878_RS15875 PF04055 Radical SAM superfamily IN878_RS15875 PF06968 Biotin and Thiamin Synthesis associated domain IN878_RS15880 PF05690 Thiazole biosynthesis protein ThiG IN878_RS15885 PF02597 ThiS family IN878_RS15890 PF00899 ThiF family IN878_RS15895 PF02581 Thiamine monophosphate synthase IN878_RS15900 PF01964 Radical SAM ThiC family IN878_RS15900 PF13667 ThiC-associated domain IN878_RS15905 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IN878_RS15910 PF00293 NUDIX domain IN878_RS15910 PF09297 NADH pyrophosphatase zinc ribbon domain IN878_RS15915 PF01208 Uroporphyrinogen decarboxylase (URO-D) IN878_RS15920 PF04493 Endonuclease V IN878_RS15925 PF04222 Protein of unknown function (DUF416) IN878_RS15930 PF00216 Bacterial DNA-binding protein IN878_RS15935 PF07356 Protein of unknown function (DUF1481) IN878_RS15940 PF13801 Heavy-metal resistance IN878_RS15945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS15945 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS15950 PF00158 Sigma-54 interaction domain IN878_RS15950 PF00072 Response regulator receiver domain IN878_RS15950 PF02954 Bacterial regulatory protein, Fis family IN878_RS15955 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IN878_RS15955 PF02844 Phosphoribosylglycinamide synthetase, N domain IN878_RS15955 PF02843 Phosphoribosylglycinamide synthetase, C domain IN878_RS15960 PF02142 MGS-like domain IN878_RS15960 PF01808 AICARFT/IMPCHase bienzyme IN878_RS15990 PF13673 Acetyltransferase (GNAT) domain IN878_RS15995 PF04204 Homoserine O-succinyltransferase IN878_RS16000 PF01274 Malate synthase IN878_RS16005 PF00463 Isocitrate lyase family IN878_RS16010 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) IN878_RS16015 PF07906 ShET2 enterotoxin, N-terminal region IN878_RS16020 PF09339 IclR helix-turn-helix domain IN878_RS16020 PF01614 Bacterial transcriptional regulator IN878_RS16025 PF02574 Homocysteine S-methyltransferase IN878_RS16025 PF00809 Pterin binding enzyme IN878_RS16025 PF02965 Vitamin B12 dependent methionine synthase, activation domain IN878_RS16025 PF02607 B12 binding domain IN878_RS16025 PF02310 B12 binding domain IN878_RS16030 PF02690 Na+/Pi-cotransporter IN878_RS16035 PF03575 Peptidase family S51 IN878_RS16040 PF01479 S4 domain IN878_RS16040 PF00849 RNA pseudouridylate synthase IN878_RS16045 PF11656 YjbD family (DUF3811) IN878_RS16050 PF01842 ACT domain IN878_RS16050 PF00696 Amino acid kinase family IN878_RS16055 PF00342 Phosphoglucose isomerase IN878_RS16060 PF11106 Exopolysaccharide production protein YjbE IN878_RS16065 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF IN878_RS16070 PF06251 Capsule biosynthesis GfcC IN878_RS16075 PF06082 Exopolysaccharide biosynthesis protein YbjH IN878_RS16080 PF17089 Uncharacterised protein family IN878_RS16090 PF06146 Phosphate-starvation-inducible E IN878_RS16095 PF00083 Sugar (and other) transporter IN878_RS16100 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS16105 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS16105 PF14785 Maltose transport system permease protein MalF P2 domain IN878_RS16110 PF01547 Bacterial extracellular solute-binding protein IN878_RS16115 PF17912 MalK OB fold domain IN878_RS16115 PF00005 ABC transporter IN878_RS16120 PF02264 LamB porin IN878_RS16125 PF07148 Maltose operon periplasmic protein precursor (MalM) IN878_RS16135 PF04345 Chorismate lyase IN878_RS16140 PF01040 UbiA prenyltransferase family IN878_RS16155 PF01219 Prokaryotic diacylglycerol kinase IN878_RS16160 PF00717 Peptidase S24-like IN878_RS16160 PF01726 LexA DNA binding domain IN878_RS16165 PF01554 MatE IN878_RS16170 PF05532 CsbD-like IN878_RS16175 PF01475 Ferric uptake regulator family IN878_RS16185 PF01207 Dihydrouridine synthase (Dus) IN878_RS16190 PF09583 Phage shock protein G (Phageshock_PspG) IN878_RS16195 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS16195 PF00107 Zinc-binding dehydrogenase IN878_RS16200 PF00772 DnaB-like helicase N terminal domain IN878_RS16200 PF03796 DnaB-like helicase C terminal domain IN878_RS16205 PF01168 Alanine racemase, N-terminal domain IN878_RS16205 PF00842 Alanine racemase, C-terminal domain IN878_RS16210 PF00155 Aminotransferase class I and II IN878_RS16220 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) IN878_RS16225 PF01894 Uncharacterised protein family UPF0047 IN878_RS16230 PF04237 YjbR IN878_RS16235 PF17760 UvrA interaction domain IN878_RS16235 PF17755 UvrA DNA-binding domain IN878_RS16235 PF00005 ABC transporter IN878_RS16240 PF00436 Single-strand binding protein family IN878_RS16245 PF15940 Family of unknown function IN878_RS16250 PF12792 CSS motif domain associated with EAL IN878_RS16250 PF00563 EAL domain IN878_RS16255 PF12833 Helix-turn-helix domain IN878_RS16260 PF09278 MerR, DNA binding IN878_RS16260 PF00376 MerR family regulatory protein IN878_RS16265 PF00860 Permease family IN878_RS16270 PF00999 Sodium/hydrogen exchanger family IN878_RS16275 PF00805 Pentapeptide repeats (8 copies) IN878_RS16280 PF00474 Sodium:solute symporter family IN878_RS16285 PF04341 Protein of unknown function, DUF485 IN878_RS16290 PF16177 Acetyl-coenzyme A synthetase N-terminus IN878_RS16290 PF13193 AMP-binding enzyme C-terminal domain IN878_RS16290 PF00501 AMP-binding enzyme IN878_RS16295 PF02335 Cytochrome c552 IN878_RS16300 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) IN878_RS16300 PF13435 Cytochrome c554 and c-prime IN878_RS16305 PF00037 4Fe-4S binding domain IN878_RS16305 PF13247 4Fe-4S dicluster domain IN878_RS16310 PF03916 Polysulphide reductase, NrfD IN878_RS16315 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IN878_RS16315 PF01578 Cytochrome C assembly protein IN878_RS16320 PF03918 Cytochrome C biogenesis protein IN878_RS16330 PF00375 Sodium:dicarboxylate symporter family IN878_RS16335 PF08238 Sel1 repeat IN878_RS16345 PF02321 Outer membrane efflux protein IN878_RS16350 PF04632 Fusaric acid resistance protein family IN878_RS16355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS16355 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS16360 PF17090 Uncharacterised protein family IN878_RS16365 PF00753 Metallo-beta-lactamase superfamily IN878_RS16365 PF14864 Alkyl sulfatase C-terminal IN878_RS16365 PF14863 Alkyl sulfatase dimerisation IN878_RS16370 PF00480 ROK family IN878_RS16375 PF00834 Ribulose-phosphate 3 epimerase family IN878_RS16380 PF02653 Branched-chain amino acid transport system / permease component IN878_RS16385 PF00005 ABC transporter IN878_RS16390 PF13407 Periplasmic binding protein domain IN878_RS16395 PF01418 Helix-turn-helix domain, rpiR family IN878_RS16395 PF01380 SIS domain IN878_RS16400 PF02502 Ribose/Galactose Isomerase IN878_RS16410 PF12706 Beta-lactamase superfamily domain IN878_RS16415 PF00583 Acetyltransferase (GNAT) family IN878_RS16425 PF07969 Amidohydrolase family IN878_RS16430 PF00005 ABC transporter IN878_RS16435 PF00005 ABC transporter IN878_RS16440 PF06007 Phosphonate metabolism protein PhnJ IN878_RS16445 PF05861 Bacterial phosphonate metabolism protein (PhnI) IN878_RS16450 PF05845 Bacterial phosphonate metabolism protein (PhnH) IN878_RS16455 PF06754 Phosphonate metabolism protein PhnG IN878_RS16460 PF00392 Bacterial regulatory proteins, gntR family IN878_RS16460 PF07702 UTRA domain IN878_RS16475 PF00005 ABC transporter IN878_RS16480 PF06983 3-demethylubiquinone-9 3-methyltransferase IN878_RS16485 PF03831 PhnA domain IN878_RS16485 PF08274 PhnA Zinc-Ribbon IN878_RS16490 PF00350 Dynamin family IN878_RS16495 PF13990 YjcZ-like protein IN878_RS16500 PF00083 Sugar (and other) transporter IN878_RS16500 PF08946 Osmosensory transporter coiled coil IN878_RS16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS16510 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS16515 PF00486 Transcriptional regulatory protein, C terminal IN878_RS16515 PF00072 Response regulator receiver domain IN878_RS16520 PF08019 Phosphoethanolamine transferase EptA/EptB IN878_RS16520 PF00884 Sulfatase IN878_RS16525 PF13520 Amino acid permease IN878_RS16530 PF12833 Helix-turn-helix domain IN878_RS16535 PF01276 Orn/Lys/Arg decarboxylase, major domain IN878_RS16535 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IN878_RS16535 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IN878_RS16540 PF12833 Helix-turn-helix domain IN878_RS16545 PF02056 Family 4 glycosyl hydrolase IN878_RS16545 PF11975 Family 4 glycosyl hydrolase C-terminal domain IN878_RS16555 PF09997 Predicted membrane protein (DUF2238) IN878_RS16560 PF05681 Fumarate hydratase (Fumerase) IN878_RS16560 PF05683 Fumarase C-terminus IN878_RS16565 PF03605 Anaerobic c4-dicarboxylate membrane transporter IN878_RS16570 PF00072 Response regulator receiver domain IN878_RS16575 PF00989 PAS fold IN878_RS16575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS16575 PF17203 Single cache domain 3 IN878_RS16575 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IN878_RS16580 PF06902 Divergent 4Fe-4S mono-cluster IN878_RS16585 PF14542 GCN5-related N-acetyl-transferase IN878_RS16590 PF11080 Endoribonuclease GhoS IN878_RS16595 PF10753 Toxin GhoT_OrtT IN878_RS16600 PF00152 tRNA synthetases class II (D, K and N) IN878_RS16600 PF01336 OB-fold nucleic acid binding domain IN878_RS16605 PF00854 POT family IN878_RS16610 PF01276 Orn/Lys/Arg decarboxylase, major domain IN878_RS16610 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IN878_RS16610 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IN878_RS16615 PF13520 Amino acid permease IN878_RS16620 PF18500 CadC C-terminal domain 1 IN878_RS16620 PF00486 Transcriptional regulatory protein, C terminal IN878_RS16635 PF02683 Cytochrome C biogenesis protein transmembrane region IN878_RS16635 PF11412 Disulphide bond corrector protein DsbC IN878_RS16640 PF03091 CutA1 divalent ion tolerance protein IN878_RS16645 PF03605 Anaerobic c4-dicarboxylate membrane transporter IN878_RS16650 PF10415 Fumarase C C-terminus IN878_RS16650 PF00206 Lyase IN878_RS16655 PF04186 FxsA cytoplasmic membrane protein IN878_RS16660 PF13520 Amino acid permease IN878_RS16665 PF00166 Chaperonin 10 Kd subunit IN878_RS16670 PF00118 TCP-1/cpn60 chaperonin family IN878_RS16675 PF13698 Domain of unknown function (DUF4156) IN878_RS16680 PF15922 YjeJ-like IN878_RS16685 PF04055 Radical SAM superfamily IN878_RS16690 PF08207 Elongation factor P (EF-P) KOW-like domain IN878_RS16690 PF09285 Elongation factor P, C-terminal IN878_RS16690 PF01132 Elongation factor P (EF-P) OB domain IN878_RS16695 PF08085 Entericidin EcnA/B family IN878_RS16700 PF08085 Entericidin EcnA/B family IN878_RS16705 PF00893 Small Multidrug Resistance protein IN878_RS16710 PF08212 Lipocalin-like domain IN878_RS16715 PF00144 Beta-lactamase IN878_RS16720 PF02313 Fumarate reductase subunit D IN878_RS16725 PF02300 Fumarate reductase subunit C IN878_RS16730 PF13085 2Fe-2S iron-sulfur cluster binding domain IN878_RS16730 PF13183 4Fe-4S dicluster domain IN878_RS16735 PF02910 Fumarate reductase flavoprotein C-term IN878_RS16735 PF00890 FAD binding domain IN878_RS16740 PF00152 tRNA synthetases class II (D, K and N) IN878_RS16745 PF13520 Amino acid permease IN878_RS16755 PF10840 Protein of unknown function (DUF2645) IN878_RS16760 PF12794 Mechanosensitive ion channel inner membrane domain 1 IN878_RS16760 PF00924 Mechanosensitive ion channel IN878_RS16760 PF12795 Mechanosensitive ion channel porin domain IN878_RS16765 PF02666 Phosphatidylserine decarboxylase IN878_RS16770 PF03193 RsgA GTPase IN878_RS16775 PF00929 Exonuclease IN878_RS16800 PF08331 Domain of unknown function (DUF1730) IN878_RS16805 PF03853 YjeF-related protein N-terminus IN878_RS16805 PF01256 Carbohydrate kinase IN878_RS16810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IN878_RS16815 PF01520 N-acetylmuramoyl-L-alanine amidase IN878_RS16820 PF08676 MutL C terminal dimerisation domain IN878_RS16820 PF01119 DNA mismatch repair protein, C-terminal domain IN878_RS16830 PF17209 Hfq protein IN878_RS16835 PF16360 GTP-binding GTPase Middle Region IN878_RS16835 PF01926 50S ribosome-binding GTPase IN878_RS16835 PF13167 GTP-binding GTPase N-terminal IN878_RS16840 PF01145 SPFH domain / Band 7 family IN878_RS16840 PF12221 Bacterial membrane protein N terminal IN878_RS16845 PF01145 SPFH domain / Band 7 family IN878_RS16850 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) IN878_RS16855 PF00709 Adenylosuccinate synthetase IN878_RS16860 PF02082 Transcriptional regulator IN878_RS16865 PF17876 Cold shock domain IN878_RS16865 PF00575 S1 RNA binding domain IN878_RS16865 PF00773 RNB domain IN878_RS16865 PF08461 Ribonuclease R winged-helix domain IN878_RS16865 PF08206 Ribonuclease B OB domain IN878_RS16870 PF08032 RNA 2'-O ribose methyltransferase substrate binding IN878_RS16870 PF00588 SpoU rRNA Methylase family IN878_RS16875 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) IN878_RS16880 PF04012 PspA/IM30 family IN878_RS16885 PF10679 Protein of unknown function (DUF2491) IN878_RS16890 PF03994 Domain of Unknown Function (DUF350) IN878_RS16895 PF06693 Protein of unknown function (DUF1190) IN878_RS16900 PF03738 Glutathionylspermidine synthase preATP-grasp IN878_RS16905 PF18158 Adaptive response protein AidB N-terminal domain IN878_RS16905 PF02770 Acyl-CoA dehydrogenase, middle domain IN878_RS16905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IN878_RS16910 PF07338 Protein of unknown function (DUF1471) IN878_RS16915 PF07338 Protein of unknown function (DUF1471) IN878_RS16920 PF00326 Prolyl oligopeptidase family IN878_RS16925 PF00455 DeoR C terminal sensor domain IN878_RS16925 PF08220 DeoR-like helix-turn-helix domain IN878_RS16935 PF03611 PTS system sugar-specific permease component IN878_RS16940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS16945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS16950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IN878_RS16955 PF01261 Xylose isomerase-like TIM barrel IN878_RS16960 PF00596 Class II Aldolase and Adducin N-terminal domain IN878_RS16965 PF07338 Protein of unknown function (DUF1471) IN878_RS16970 PF01250 Ribosomal protein S6 IN878_RS16975 PF00436 Single-strand binding protein family IN878_RS16980 PF01084 Ribosomal protein S18 IN878_RS16985 PF01281 Ribosomal protein L9, N-terminal domain IN878_RS16985 PF03948 Ribosomal protein L9, C-terminal domain IN878_RS16990 PF03480 Bacterial extracellular solute-binding protein, family 7 IN878_RS16995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IN878_RS17000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IN878_RS17005 PF00890 FAD binding domain IN878_RS17005 PF02910 Fumarate reductase flavoprotein C-term IN878_RS17010 PF01144 Coenzyme A transferase IN878_RS17015 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS17030 PF17938 Tetracyclin repressor-like, C-terminal domain IN878_RS17035 PF08525 Opacity-associated protein A N-terminal motif IN878_RS17035 PF04225 Opacity-associated protein A LysM-like domain IN878_RS17040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IN878_RS17040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IN878_RS17045 PF00324 Amino acid permease IN878_RS17050 PF04405 Domain of Unknown function (DUF542) IN878_RS17050 PF01814 Hemerythrin HHE cation binding domain IN878_RS17055 PF00892 EamA-like transporter family IN878_RS17060 PF05368 NmrA-like family IN878_RS17065 PF01638 HxlR-like helix-turn-helix IN878_RS17070 PF02872 5'-nucleotidase, C-terminal domain IN878_RS17070 PF00149 Calcineurin-like phosphoesterase IN878_RS17075 PF00459 Inositol monophosphatase family IN878_RS17080 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IN878_RS17085 PF06526 Protein of unknown function (DUF1107) IN878_RS17090 PF00571 CBS domain IN878_RS17090 PF01595 Cyclin M transmembrane N-terminal domain IN878_RS17090 PF03471 Transporter associated domain IN878_RS17095 PF01625 Peptide methionine sulfoxide reductase IN878_RS17100 PF01103 Surface antigen IN878_RS17100 PF07244 Surface antigen variable number repeat IN878_RS17100 PF17243 POTRA domain TamA domain 1 IN878_RS17105 PF04357 TamB, inner membrane protein subunit of TAM complex IN878_RS17110 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like IN878_RS17115 PF00719 Inorganic pyrophosphatase IN878_RS17120 PF13407 Periplasmic binding protein domain IN878_RS17125 PF00005 ABC transporter IN878_RS17130 PF02653 Branched-chain amino acid transport system / permease component IN878_RS17135 PF02653 Branched-chain amino acid transport system / permease component IN878_RS17140 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IN878_RS17145 PF01225 Mur ligase family, catalytic domain IN878_RS17145 PF02875 Mur ligase family, glutamate ligase domain IN878_RS17145 PF08245 Mur ligase middle domain IN878_RS17150 PF04751 Protein of unknown function (DUF615) IN878_RS17155 PF01523 Putative modulator of DNA gyrase IN878_RS17160 PF07361 Cytochrome b562 IN878_RS17170 PF13597 Anaerobic ribonucleoside-triphosphate reductase IN878_RS17170 PF03477 ATP cone domain IN878_RS17175 PF00128 Alpha amylase, catalytic domain IN878_RS17175 PF11941 Domain of unknown function (DUF3459) IN878_RS17180 PF02378 Phosphotransferase system, EIIC IN878_RS17180 PF00367 phosphotransferase system, EIIB IN878_RS17185 PF00356 Bacterial regulatory proteins, lacI family IN878_RS17190 PF17059 MgtA leader peptide IN878_RS17195 PF00689 Cation transporting ATPase, C-terminus IN878_RS17195 PF00690 Cation transporter/ATPase, N-terminus IN878_RS17200 PF01042 Endoribonuclease L-PSP IN878_RS17205 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IN878_RS17205 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IN878_RS17210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IN878_RS17210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IN878_RS17215 PF08052 PyrBI operon leader peptide IN878_RS17220 PF01042 Endoribonuclease L-PSP IN878_RS17230 PF00440 Bacterial regulatory proteins, tetR family IN878_RS17235 PF04074 YhcH/YjgK/YiaL IN878_RS17245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IN878_RS17245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IN878_RS17250 PF06877 Regulator of ribonuclease activity B IN878_RS17255 PF00583 Acetyltransferase (GNAT) family IN878_RS17265 PF10458 Valyl tRNA synthetase tRNA binding arm IN878_RS17265 PF08264 Anticodon-binding domain of tRNA IN878_RS17265 PF00133 tRNA synthetases class I (I, L, M and V) IN878_RS17270 PF04364 DNA polymerase III chi subunit, HolC IN878_RS17275 PF02789 Cytosol aminopeptidase family, N-terminal domain IN878_RS17275 PF00883 Cytosol aminopeptidase family, catalytic domain IN878_RS17280 PF03739 Lipopolysaccharide export system permease LptF/LptG IN878_RS17285 PF03739 Lipopolysaccharide export system permease LptF/LptG IN878_RS17290 PF05872 Bacterial protein of unknown function (DUF853) IN878_RS17295 PF00107 Zinc-binding dehydrogenase IN878_RS17295 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS17320 PF00239 Resolvase, N terminal domain IN878_RS17320 PF02796 Helix-turn-helix domain of resolvase IN878_RS17335 PF01381 Helix-turn-helix IN878_RS17370 PF00005 ABC transporter IN878_RS17375 PF01032 FecCD transport family IN878_RS17380 PF01032 FecCD transport family IN878_RS17385 PF01497 Periplasmic binding protein IN878_RS17390 PF07715 TonB-dependent Receptor Plug Domain IN878_RS17390 PF07660 Secretin and TonB N terminus short domain IN878_RS17390 PF00593 TonB dependent receptor IN878_RS17395 PF16220 Domain of unknown function (DUF4880) IN878_RS17395 PF04773 FecR protein IN878_RS17400 PF04542 Sigma-70 region 2 IN878_RS17400 PF08281 Sigma-70, region 4 IN878_RS17460 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A IN878_RS17465 PF06755 CbtA_toxin of type IV toxin-antitoxin system IN878_RS17490 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase IN878_RS17500 PF06178 Oligogalacturonate-specific porin protein (KdgM) IN878_RS17505 PF00589 Phage integrase family IN878_RS17510 PF00589 Phage integrase family IN878_RS17515 PF00419 Fimbrial protein IN878_RS17520 PF00419 Fimbrial protein IN878_RS17525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS17525 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS17530 PF13954 PapC N-terminal domain IN878_RS17530 PF13953 PapC C-terminal domain IN878_RS17530 PF00577 Outer membrane usher protein IN878_RS17535 PF00419 Fimbrial protein IN878_RS17545 PF00419 Fimbrial protein IN878_RS17545 PF09160 FimH, mannose binding IN878_RS17550 PF02447 GntP family permease IN878_RS17555 PF03786 D-mannonate dehydratase (UxuA) IN878_RS17560 PF08125 Mannitol dehydrogenase C-terminal domain IN878_RS17560 PF01232 Mannitol dehydrogenase Rossmann domain IN878_RS17565 PF00392 Bacterial regulatory proteins, gntR family IN878_RS17565 PF07729 FCD domain IN878_RS17570 PF10887 Protein of unknown function (DUF2686) IN878_RS17580 PF04965 Gene 25-like lysozyme IN878_RS17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS17585 PF03466 LysR substrate binding domain IN878_RS17590 PF01979 Amidohydrolase family IN878_RS17595 PF07670 Nucleoside recognition IN878_RS17600 PF07670 Nucleoside recognition IN878_RS17605 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family IN878_RS17610 PF06779 Uncharacterised MFS-type transporter YbfB IN878_RS17615 PF06977 SdiA-regulated IN878_RS17620 PF11823 Protein of unknown function (DUF3343) IN878_RS17625 PF01869 BadF/BadG/BcrA/BcrD ATPase family IN878_RS17630 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component IN878_RS17635 PF04286 Protein of unknown function (DUF445) IN878_RS17640 PF07690 Major Facilitator Superfamily IN878_RS17665 PF07683 Cobalamin synthesis protein cobW C-terminal domain IN878_RS17665 PF02492 CobW/HypB/UreG, nucleotide-binding domain IN878_RS17670 PF04328 Selenoprotein, putative IN878_RS17675 PF02554 Carbon starvation protein CstA IN878_RS17675 PF13722 5TM C-terminal transporter carbon starvation CstA IN878_RS17680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IN878_RS17680 PF02203 Tar ligand binding domain homologue IN878_RS17680 PF00672 HAMP domain IN878_RS17685 PF07690 Major Facilitator Superfamily IN878_RS17690 PF00392 Bacterial regulatory proteins, gntR family IN878_RS17690 PF07729 FCD domain IN878_RS17695 PF00107 Zinc-binding dehydrogenase IN878_RS17695 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS17700 PF00884 Sulfatase IN878_RS17705 PF10696 Protein of unknown function (DUF2501) IN878_RS17710 PF01695 IstB-like ATP binding protein IN878_RS17715 PF17948 DnaT DNA-binding domain IN878_RS17720 PF12821 Threonine/Serine exporter, ThrE IN878_RS17725 PF06738 Putative threonine/serine exporter IN878_RS17730 PF00196 Bacterial regulatory proteins, luxR family IN878_RS17735 PF00196 Bacterial regulatory proteins, luxR family IN878_RS17740 PF11575 FhuF 2Fe-2S C-terminal domain IN878_RS17740 PF06276 Ferric iron reductase FhuF-like transporter IN878_RS17745 PF07256 Protein of unknown function (DUF1435) IN878_RS17765 PF08468 Methyltransferase small domain N-terminal IN878_RS17765 PF05175 Methyltransferase small domain IN878_RS17770 PF03603 DNA polymerase III psi subunit IN878_RS17775 PF00583 Acetyltransferase (GNAT) family IN878_RS17780 PF13419 Haloacid dehalogenase-like hydrolase IN878_RS17785 PF00009 Elongation factor Tu GTP binding domain IN878_RS17785 PF03144 Elongation factor Tu domain 2 IN878_RS17785 PF16658 Class II release factor RF3, C-terminal domain IN878_RS17790 PF04972 BON domain IN878_RS17795 PF07043 Protein of unknown function (DUF1328) IN878_RS17800 PF01734 Patatin-like phospholipase IN878_RS17805 PF01026 TatD related DNase IN878_RS17810 PF04055 Radical SAM superfamily IN878_RS17815 PF11230 Protein of unknown function (DUF3029) IN878_RS17820 PF01791 DeoC/LacD family aldolase IN878_RS17825 PF02885 Glycosyl transferase family, helical bundle domain IN878_RS17825 PF00591 Glycosyl transferase family, a/b domain IN878_RS17825 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IN878_RS17830 PF01676 Metalloenzyme superfamily IN878_RS17835 PF01048 Phosphorylase superfamily IN878_RS17845 PF10437 Bacterial lipoate protein ligase C-terminus IN878_RS17845 PF03099 Biotin/lipoate A/B protein ligase family IN878_RS17850 PF10144 Bacterial virulence factor haemolysin IN878_RS17855 PF18429 Domain of unknown function (DUF5609) IN878_RS17860 PF18073 Rubredoxin metal binding domain IN878_RS17865 PF01381 Helix-turn-helix IN878_RS17865 PF13521 AAA domain IN878_RS17875 PF00005 ABC transporter IN878_RS17875 PF12848 ABC transporter IN878_RS17880 PF01464 Transglycosylase SLT domain IN878_RS17880 PF14718 Soluble lytic murein transglycosylase L domain IN878_RS17885 PF01371 Trp repressor protein IN878_RS17890 PF01931 Protein of unknown function DUF84 IN878_RS17895 PF00300 Histidine phosphatase superfamily (branch 1) IN878_RS17900 PF12833 Helix-turn-helix domain IN878_RS17900 PF06445 GyrI-like small molecule binding domain IN878_RS17905 PF05981 CreA protein IN878_RS17910 PF00486 Transcriptional regulatory protein, C terminal IN878_RS17910 PF00072 Response regulator receiver domain IN878_RS17915 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS17915 PF00672 HAMP domain IN878_RS17920 PF06123 Inner membrane protein CreD IN878_RS17925 PF00486 Transcriptional regulatory protein, C terminal IN878_RS17925 PF00072 Response regulator receiver domain IN878_RS17935 PF00588 SpoU rRNA Methylase family IN878_RS17940 PF08254 Threonine leader peptide IN878_RS17945 PF03447 Homoserine dehydrogenase, NAD binding domain IN878_RS17945 PF13840 ACT domain IN878_RS17945 PF01842 ACT domain IN878_RS17945 PF00742 Homoserine dehydrogenase IN878_RS17945 PF00696 Amino acid kinase family IN878_RS17950 PF00288 GHMP kinases N terminal domain IN878_RS17950 PF08544 GHMP kinases C terminal IN878_RS17955 PF00291 Pyridoxal-phosphate dependent enzyme IN878_RS17955 PF14821 Threonine synthase N terminus IN878_RS17960 PF10697 Protein of unknown function (DUF2502) IN878_RS17965 PF03883 Peroxide stress protein YaaA IN878_RS17970 PF01235 Sodium:alanine symporter family IN878_RS17975 PF00923 Transaldolase/Fructose-6-phosphate aldolase IN878_RS17980 PF00994 Probable molybdopterin binding domain IN878_RS17985 PF01184 GPR1/FUN34/yaaH family IN878_RS17990 PF13099 Domain of unknown function (DUF3944) IN878_RS17990 PF03981 Ubiquinol-cytochrome C chaperone IN878_RS17995 PF10807 Protein of unknown function (DUF2541) IN878_RS18000 PF00012 Hsp70 protein IN878_RS18005 PF00226 DnaJ domain IN878_RS18005 PF01556 DnaJ C terminal domain IN878_RS18005 PF00684 DnaJ central domain IN878_RS18010 PF01609 Transposase DDE domain IN878_RS18015 PF01848 Hok/gef family IN878_RS18020 PF06965 Na+/H+ antiporter 1 IN878_RS18025 PF03466 LysR substrate binding domain IN878_RS18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS18040 PF01649 Ribosomal protein S20 IN878_RS18045 PF10837 Protein of unknown function (DUF2575) IN878_RS18050 PF01687 Riboflavin kinase IN878_RS18050 PF06574 FAD synthetase IN878_RS18055 PF08264 Anticodon-binding domain of tRNA IN878_RS18055 PF00133 tRNA synthetases class I (I, L, M and V) IN878_RS18055 PF06827 Zinc finger found in FPG and IleRS IN878_RS18060 PF01252 Signal peptidase (SPase) II IN878_RS18065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IN878_RS18070 PF02401 LytB protein IN878_RS18075 PF01156 Inosine-uridine preferring nucleoside hydrolase IN878_RS18080 PF05173 Dihydrodipicolinate reductase, C-terminus IN878_RS18080 PF01113 Dihydrodipicolinate reductase, N-terminus IN878_RS18085 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IN878_RS18085 PF00117 Glutamine amidotransferase class-I IN878_RS18090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IN878_RS18090 PF02142 MGS-like domain IN878_RS18090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IN878_RS18095 PF07180 CaiF/GrlA transcriptional regulator IN878_RS18100 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS18105 PF00378 Enoyl-CoA hydratase/isomerase IN878_RS18110 PF00501 AMP-binding enzyme IN878_RS18110 PF13193 AMP-binding enzyme C-terminal domain IN878_RS18115 PF02515 CoA-transferase family III IN878_RS18120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IN878_RS18120 PF02770 Acyl-CoA dehydrogenase, middle domain IN878_RS18120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IN878_RS18125 PF02028 BCCT, betaine/carnitine/choline family transporter IN878_RS18130 PF01012 Electron transfer flavoprotein domain IN878_RS18135 PF00766 Electron transfer flavoprotein FAD-binding domain IN878_RS18135 PF01012 Electron transfer flavoprotein domain IN878_RS18140 PF01494 FAD binding domain IN878_RS18150 PF00083 Sugar (and other) transporter IN878_RS18155 PF02525 Flavodoxin-like fold IN878_RS18160 PF00999 Sodium/hydrogen exchanger family IN878_RS18160 PF02254 TrkA-N domain IN878_RS18165 PF00186 Dihydrofolate reductase IN878_RS18170 PF00149 Calcineurin-like phosphoesterase IN878_RS18175 PF04379 ApaG domain IN878_RS18180 PF00398 Ribosomal RNA adenine dimethylase IN878_RS18185 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IN878_RS18190 PF09312 SurA N-terminal domain IN878_RS18190 PF00639 PPIC-type PPIASE domain IN878_RS18195 PF04453 LPS transport system D IN878_RS18195 PF03968 OstA-like protein IN878_RS18200 PF05099 Tellurite resistance protein TerB IN878_RS18200 PF00226 DnaJ domain IN878_RS18205 PF00849 RNA pseudouridylate synthase IN878_RS18210 PF00271 Helicase conserved C-terminal domain IN878_RS18210 PF12137 RNA polymerase recycling family C-terminal IN878_RS18210 PF00176 SNF2 family N-terminal domain IN878_RS18210 PF18339 RapA N-terminal Tudor like domain 1 IN878_RS18210 PF18337 RapA N-terminal Tudor like domain IN878_RS18215 PF03104 DNA polymerase family B, exonuclease domain IN878_RS18215 PF00136 DNA polymerase family B IN878_RS18220 PF00596 Class II Aldolase and Adducin N-terminal domain IN878_RS18225 PF11762 L-arabinose isomerase C-terminal domain IN878_RS18225 PF02610 L-arabinose isomerase IN878_RS18230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IN878_RS18235 PF02311 AraC-like ligand binding domain IN878_RS18235 PF12833 Helix-turn-helix domain IN878_RS18240 PF09335 SNARE associated Golgi protein IN878_RS18245 PF00005 ABC transporter IN878_RS18250 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS18260 PF13936 Helix-turn-helix domain IN878_RS18260 PF00665 Integrase core domain IN878_RS18270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS18270 PF12793 Sugar transport-related sRNA regulator N-term IN878_RS18280 PF07690 Major Facilitator Superfamily IN878_RS18285 PF00694 Aconitase C-terminal domain IN878_RS18290 PF00330 Aconitase family (aconitate hydratase) IN878_RS18295 PF00180 Isocitrate/isopropylmalate dehydrogenase IN878_RS18300 PF08502 LeuA allosteric (dimerisation) domain IN878_RS18300 PF00682 HMGL-like IN878_RS18305 PF08054 Leucine operon leader peptide IN878_RS18310 PF03466 LysR substrate binding domain IN878_RS18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS18320 PF00205 Thiamine pyrophosphate enzyme, central domain IN878_RS18320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS18320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IN878_RS18325 PF10369 Small subunit of acetolactate synthase IN878_RS18335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IN878_RS18335 PF00356 Bacterial regulatory proteins, lacI family IN878_RS18340 PF02381 MraZ protein, putative antitoxin-like IN878_RS18345 PF01795 MraW methylase family IN878_RS18350 PF04999 Cell division protein FtsL IN878_RS18355 PF00905 Penicillin binding protein transpeptidase domain IN878_RS18355 PF03717 Penicillin-binding Protein dimerisation domain IN878_RS18360 PF08245 Mur ligase middle domain IN878_RS18360 PF01225 Mur ligase family, catalytic domain IN878_RS18360 PF02875 Mur ligase family, glutamate ligase domain IN878_RS18365 PF02875 Mur ligase family, glutamate ligase domain IN878_RS18365 PF08245 Mur ligase middle domain IN878_RS18365 PF01225 Mur ligase family, catalytic domain IN878_RS18370 PF00953 Glycosyl transferase family 4 IN878_RS18370 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IN878_RS18375 PF08245 Mur ligase middle domain IN878_RS18375 PF02875 Mur ligase family, glutamate ligase domain IN878_RS18380 PF01098 Cell cycle protein IN878_RS18385 PF04101 Glycosyltransferase family 28 C-terminal domain IN878_RS18385 PF03033 Glycosyltransferase family 28 N-terminal domain IN878_RS18390 PF08245 Mur ligase middle domain IN878_RS18390 PF01225 Mur ligase family, catalytic domain IN878_RS18390 PF02875 Mur ligase family, glutamate ligase domain IN878_RS18395 PF01820 D-ala D-ala ligase N-terminus IN878_RS18395 PF07478 D-ala D-ala ligase C-terminus IN878_RS18400 PF08478 POTRA domain, FtsQ-type IN878_RS18400 PF03799 Cell division protein FtsQ IN878_RS18405 PF02491 SHS2 domain inserted in FTSA IN878_RS18410 PF00091 Tubulin/FtsZ family, GTPase domain IN878_RS18410 PF12327 FtsZ family, C-terminal domain IN878_RS18415 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IN878_RS18420 PF06558 Secretion monitor precursor protein (SecM) IN878_RS18425 PF07516 SecA Wing and Scaffold domain IN878_RS18425 PF07517 SecA DEAD-like domain IN878_RS18425 PF02810 SEC-C motif IN878_RS18425 PF01043 SecA preprotein cross-linking domain IN878_RS18430 PF00293 NUDIX domain IN878_RS18435 PF03884 DNA gyrase inhibitor YacG IN878_RS18440 PF07072 Cell division protein IN878_RS18445 PF01121 Dephospho-CoA kinase IN878_RS18455 PF00478 IMP dehydrogenase / GMP reductase domain IN878_RS18460 PF00482 Type II secretion system (T2SS), protein F IN878_RS18465 PF00437 Type II/IV secretion system protein IN878_RS18465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IN878_RS18470 PF07963 Prokaryotic N-terminal methylation motif IN878_RS18475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IN878_RS18475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IN878_RS18480 PF01510 N-acetylmuramoyl-L-alanine amidase IN878_RS18485 PF17113 Regulatory signalling modulator protein AmpE IN878_RS18490 PF00324 Amino acid permease IN878_RS18495 PF00392 Bacterial regulatory proteins, gntR family IN878_RS18495 PF07729 FCD domain IN878_RS18500 PF00456 Transketolase, thiamine diphosphate binding domain IN878_RS18500 PF17831 Pyruvate dehydrogenase E1 component middle domain IN878_RS18505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IN878_RS18505 PF00364 Biotin-requiring enzyme IN878_RS18505 PF02817 e3 binding domain IN878_RS18510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IN878_RS18510 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS18515 PF11737 Protein of unknown function (DUF3300) IN878_RS18520 PF00330 Aconitase family (aconitate hydratase) IN878_RS18520 PF11791 Aconitate B N-terminal domain IN878_RS18520 PF06434 Aconitate hydratase 2 N-terminus IN878_RS18525 PF06062 Uncharacterised protein family (UPF0231) IN878_RS18530 PF02675 S-adenosylmethionine decarboxylase IN878_RS18535 PF17284 Spermidine synthase tetramerisation domain IN878_RS18540 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) IN878_RS18545 PF07731 Multicopper oxidase IN878_RS18545 PF00394 Multicopper oxidase IN878_RS18545 PF07732 Multicopper oxidase IN878_RS18550 PF01011 PQQ enzyme repeat IN878_RS18555 PF00156 Phosphoribosyl transferase domain IN878_RS18560 PF00484 Carbonic anhydrase IN878_RS18565 PF00005 ABC transporter IN878_RS18570 PF01061 ABC-2 type transporter IN878_RS18575 PF03610 PTS system fructose IIA component IN878_RS18580 PF01522 Polysaccharide deacetylase IN878_RS18585 PF02261 Aspartate decarboxylase IN878_RS18590 PF04754 Putative transposase, YhgA-like IN878_RS18595 PF02569 Pantoate-beta-alanine ligase IN878_RS18600 PF02548 Ketopantoate hydroxymethyltransferase IN878_RS18605 PF00419 Fimbrial protein IN878_RS18610 PF00419 Fimbrial protein IN878_RS18615 PF00419 Fimbrial protein IN878_RS18620 PF00419 Fimbrial protein IN878_RS18625 PF13953 PapC C-terminal domain IN878_RS18625 PF13954 PapC N-terminal domain IN878_RS18625 PF00577 Outer membrane usher protein IN878_RS18630 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS18630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS18635 PF00419 Fimbrial protein IN878_RS18640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IN878_RS18645 PF12627 Probable RNA and SrmB- binding site of polymerase A IN878_RS18645 PF12626 Polymerase A arginine-rich C-terminus IN878_RS18645 PF01743 Poly A polymerase head domain IN878_RS18650 PF00749 tRNA synthetases class I (E and Q), catalytic domain IN878_RS18655 PF01258 Prokaryotic dksA/traR C4-type zinc finger IN878_RS18660 PF03749 Sugar fermentation stimulation protein RE domain IN878_RS18660 PF17746 SfsA N-terminal OB domain IN878_RS18665 PF02834 LigT like Phosphoesterase IN878_RS18670 PF04408 Helicase associated domain (HA2) IN878_RS18670 PF00270 DEAD/DEAH box helicase IN878_RS18670 PF00271 Helicase conserved C-terminal domain IN878_RS18670 PF08482 ATP-dependent helicase C-terminal IN878_RS18675 PF00905 Penicillin binding protein transpeptidase domain IN878_RS18675 PF00912 Transglycosylase IN878_RS18675 PF14814 Bifunctional transglycosylase second domain IN878_RS18675 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal IN878_RS18680 PF00593 TonB dependent receptor IN878_RS18680 PF07715 TonB-dependent Receptor Plug Domain IN878_RS18685 PF00005 ABC transporter IN878_RS18690 PF01497 Periplasmic binding protein IN878_RS18695 PF01032 FecCD transport family IN878_RS18700 PF00202 Aminotransferase class-III IN878_RS18705 PF00654 Voltage gated chloride channel IN878_RS18715 PF01521 Iron-sulphur cluster biosynthesis IN878_RS18720 PF03458 UPF0126 domain IN878_RS18725 PF01497 Periplasmic binding protein IN878_RS18730 PF01048 Phosphorylase superfamily IN878_RS18735 PF01966 HD domain IN878_RS18735 PF13286 Phosphohydrolase-associated domain IN878_RS18740 PF00595 PDZ domain IN878_RS18745 PF13556 PucR C-terminal helix-turn-helix domain IN878_RS18745 PF05651 Putative sugar diacid recognition IN878_RS18745 PF17853 GGDEF-like domain IN878_RS18750 PF11944 Protein of unknown function (DUF3461) IN878_RS18755 PF00149 Calcineurin-like phosphoesterase IN878_RS18760 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IN878_RS18760 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS18760 PF14602 Hexapeptide repeat of succinyl-transferase IN878_RS18765 PF01966 HD domain IN878_RS18765 PF01842 ACT domain IN878_RS18765 PF08335 GlnD PII-uridylyltransferase IN878_RS18765 PF01909 Nucleotidyltransferase domain IN878_RS18770 PF00557 Metallopeptidase family M24 IN878_RS18775 PF00318 Ribosomal protein S2 IN878_RS18780 PF00889 Elongation factor TS IN878_RS18785 PF00696 Amino acid kinase family IN878_RS18790 PF01765 Ribosome recycling factor IN878_RS18795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IN878_RS18795 PF13288 DXP reductoisomerase C-terminal domain IN878_RS18795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IN878_RS18800 PF01255 Putative undecaprenyl diphosphate synthase IN878_RS18810 PF02163 Peptidase family M50 IN878_RS18810 PF17820 PDZ domain IN878_RS18815 PF01103 Surface antigen IN878_RS18815 PF07244 Surface antigen variable number repeat IN878_RS18820 PF03938 Outer membrane protein (OmpH-like) IN878_RS18825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IN878_RS18825 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS18830 PF07977 FabA-like domain IN878_RS18835 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS18835 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IN878_RS18840 PF02684 Lipid-A-disaccharide synthetase IN878_RS18845 PF01351 Ribonuclease HII IN878_RS18850 PF01336 OB-fold nucleic acid binding domain IN878_RS18850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IN878_RS18850 PF14579 Helix-hairpin-helix motif IN878_RS18850 PF02811 PHP domain IN878_RS18850 PF07733 Bacterial DNA polymerase III alpha NTPase domain IN878_RS18855 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IN878_RS18860 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IN878_RS18860 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IN878_RS18860 PF01276 Orn/Lys/Arg decarboxylase, major domain IN878_RS18865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IN878_RS18870 PF09179 TilS substrate binding domain IN878_RS18870 PF01171 PP-loop family IN878_RS18870 PF11734 TilS substrate C-terminal domain IN878_RS18875 PF07073 Modulator of Rho-dependent transcription termination (ROF) IN878_RS18880 PF06786 Uncharacterised protein family (UPF0253) IN878_RS18885 PF07152 YaeQ protein IN878_RS18890 PF00472 RF-1 domain IN878_RS18895 PF04170 NlpE N-terminal domain IN878_RS18895 PF17185 NlpE C-terminal OB domain IN878_RS18900 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family IN878_RS18905 PF03129 Anticodon binding domain IN878_RS18905 PF04073 Aminoacyl-tRNA editing domain IN878_RS18905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IN878_RS18910 PF01980 tRNA-methyltransferase O IN878_RS18910 PF18389 TrmO C-terminal domain IN878_RS18915 PF16358 RcsF lipoprotein IN878_RS18920 PF03180 NLPA lipoprotein IN878_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS18930 PF00005 ABC transporter IN878_RS18930 PF09383 NIL domain IN878_RS18970 PF00248 Aldo/keto reductase family IN878_RS18975 PF03466 LysR substrate binding domain IN878_RS18975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS18980 PF03372 Endonuclease/Exonuclease/phosphatase family IN878_RS18990 PF01464 Transglycosylase SLT domain IN878_RS18990 PF01476 LysM domain IN878_RS18995 PF16123 Hydroxyacylglutathione hydrolase C-terminus IN878_RS18995 PF00753 Metallo-beta-lactamase superfamily IN878_RS19000 PF08241 Methyltransferase domain IN878_RS19005 PF00075 RNase H IN878_RS19010 PF00929 Exonuclease IN878_RS19035 PF05638 Type VI secretion system effector, Hcp IN878_RS19060 PF01609 Transposase DDE domain IN878_RS19060 PF13808 DDE_Tnp_1-associated IN878_RS19065 PF00795 Carbon-nitrogen hydrolase IN878_RS19075 PF09317 Domain of unknown function (DUF1974) IN878_RS19075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IN878_RS19075 PF02770 Acyl-CoA dehydrogenase, middle domain IN878_RS19075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IN878_RS19080 PF13580 SIS domain IN878_RS19085 PF13230 Glutamine amidotransferases class-II IN878_RS19090 PF03734 L,D-transpeptidase catalytic domain IN878_RS19095 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ IN878_RS19100 PF04221 RelB antitoxin IN878_RS19120 PF00691 OmpA family IN878_RS19120 PF13677 Membrane MotB of proton-channel complex MotA/MotB IN878_RS19125 PF11799 impB/mucB/samB family C-terminal domain IN878_RS19125 PF11798 IMS family HHH motif IN878_RS19125 PF00817 impB/mucB/samB family IN878_RS19135 PF13957 Toxin YafO, type II toxin-antitoxin system IN878_RS19140 PF13673 Acetyltransferase (GNAT) domain IN878_RS19155 PF01546 Peptidase family M20/M25/M40 IN878_RS19155 PF07687 Peptidase dimerisation domain IN878_RS19160 PF00156 Phosphoribosyl transferase domain IN878_RS19165 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) IN878_RS19170 PF07417 Sigma factor-binding transcriptional regulator Crl IN878_RS19175 PF00267 Gram-negative porin IN878_RS19180 PF00696 Amino acid kinase family IN878_RS19180 PF01472 PUA domain IN878_RS19185 PF00171 Aldehyde dehydrogenase family IN878_RS19195 PF00589 Phage integrase family IN878_RS19225 PF00717 Peptidase S24-like IN878_RS19230 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT IN878_RS19260 PF01527 Transposase IN878_RS19260 PF13276 HTH-like domain IN878_RS19260 PF00665 Integrase core domain IN878_RS19265 PF05717 IS66 Orf2 like protein IN878_RS19270 PF13005 zinc-finger binding domain of transposase IS66 IN878_RS19270 PF13007 Transposase C of IS166 homeodomain IN878_RS19270 PF13817 IS66 C-terminal element IN878_RS19270 PF03050 Transposase IS66 family IN878_RS19305 PF13614 AAA domain IN878_RS19315 PF13478 XdhC Rossmann domain IN878_RS19315 PF02625 XdhC and CoxI family IN878_RS19320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IN878_RS19320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IN878_RS19325 PF03450 CO dehydrogenase flavoprotein C-terminal domain IN878_RS19325 PF00941 FAD binding domain in molybdopterin dehydrogenase IN878_RS19330 PF01799 [2Fe-2S] binding domain IN878_RS19330 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS19335 PF07274 Protein of unknown function (DUF1440) IN878_RS19340 PF03692 Putative zinc- or iron-chelating domain IN878_RS19355 PF16967 E-set like domain IN878_RS19355 PF15976 CS1-pili formation C-terminal IN878_RS19360 PF18649 EcpB C-terminal domain IN878_RS19365 PF16449 Fimbrillin MatB IN878_RS19370 PF00196 Bacterial regulatory proteins, luxR family IN878_RS19380 PF00444 Ribosomal protein L36 IN878_RS19385 PF01197 Ribosomal protein L31 IN878_RS19400 PF12833 Helix-turn-helix domain IN878_RS19410 PF04224 Protein of unknown function, DUF417 IN878_RS19415 PF07338 Protein of unknown function (DUF1471) IN878_RS19420 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS19420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IN878_RS19425 PF12833 Helix-turn-helix domain IN878_RS19425 PF12852 Cupin IN878_RS19430 PF02754 Cysteine-rich domain IN878_RS19435 PF02589 LUD domain IN878_RS19435 PF11870 Domain of unknown function (DUF3390) IN878_RS19435 PF13183 4Fe-4S dicluster domain IN878_RS19440 PF02589 LUD domain IN878_RS19450 PF00732 GMC oxidoreductase IN878_RS19450 PF05199 GMC oxidoreductase IN878_RS19455 PF00171 Aldehyde dehydrogenase family IN878_RS19460 PF00440 Bacterial regulatory proteins, tetR family IN878_RS19460 PF13977 BetI-type transcriptional repressor, C-terminal IN878_RS19465 PF02028 BCCT, betaine/carnitine/choline family transporter IN878_RS19475 PF00563 EAL domain IN878_RS19475 PF00196 Bacterial regulatory proteins, luxR family IN878_RS19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS19480 PF03466 LysR substrate binding domain IN878_RS19485 PF06496 Protein of unknown function (DUF1097) IN878_RS19490 PF12796 Ankyrin repeats (3 copies) IN878_RS19495 PF11392 Protein of unknown function (DUF2877) IN878_RS19500 PF00549 CoA-ligase IN878_RS19500 PF02629 CoA binding domain IN878_RS19505 PF06545 Protein of unknown function (DUF1116) IN878_RS19515 PF00696 Amino acid kinase family IN878_RS19520 PF07969 Amidohydrolase family IN878_RS19525 PF00107 Zinc-binding dehydrogenase IN878_RS19525 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS19540 PF01810 LysE type translocator IN878_RS19545 PF07338 Protein of unknown function (DUF1471) IN878_RS19550 PF02954 Bacterial regulatory protein, Fis family IN878_RS19550 PF00158 Sigma-54 interaction domain IN878_RS19550 PF06506 Propionate catabolism activator IN878_RS19560 PF00285 Citrate synthase, C-terminal domain IN878_RS19565 PF03972 MmgE/PrpD family IN878_RS19570 PF16177 Acetyl-coenzyme A synthetase N-terminus IN878_RS19570 PF00501 AMP-binding enzyme IN878_RS19570 PF13193 AMP-binding enzyme C-terminal domain IN878_RS19575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IN878_RS19580 PF07969 Amidohydrolase family IN878_RS19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS19585 PF03466 LysR substrate binding domain IN878_RS19590 PF00484 Carbonic anhydrase IN878_RS19595 PF02560 Cyanate lyase C-terminal domain IN878_RS19600 PF07690 Major Facilitator Superfamily IN878_RS19605 PF12464 Maltose acetyltransferase IN878_RS19605 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS19610 PF01306 LacY proton/sugar symporter IN878_RS19615 PF16353 Domain of unknown function(DUF4981) IN878_RS19615 PF02837 Glycosyl hydrolases family 2, sugar binding domain IN878_RS19615 PF02929 Beta galactosidase small chain IN878_RS19615 PF00703 Glycosyl hydrolases family 2 IN878_RS19615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IN878_RS19620 PF00356 Bacterial regulatory proteins, lacI family IN878_RS19625 PF09339 IclR helix-turn-helix domain IN878_RS19625 PF01614 Bacterial transcriptional regulator IN878_RS19630 PF01494 FAD binding domain IN878_RS19635 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IN878_RS19640 PF12697 Alpha/beta hydrolase family IN878_RS19645 PF01557 Fumarylacetoacetate (FAA) hydrolase family IN878_RS19650 PF01118 Semialdehyde dehydrogenase, NAD binding domain IN878_RS19650 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation IN878_RS19655 PF00682 HMGL-like IN878_RS19655 PF07836 DmpG-like communication domain IN878_RS19660 PF07690 Major Facilitator Superfamily IN878_RS19665 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IN878_RS19670 PF00756 Putative esterase IN878_RS19675 PF00107 Zinc-binding dehydrogenase IN878_RS19675 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS19680 PF02583 Metal-sensitive transcriptional repressor IN878_RS19690 PF00132 Bacterial transferase hexapeptide (six repeats) IN878_RS19695 PF00535 Glycosyl transferase family 2 IN878_RS19700 PF02585 GlcNAc-PI de-N-acetylase IN878_RS19705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IN878_RS19710 PF00005 ABC transporter IN878_RS19715 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS19720 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IN878_RS19725 PF00490 Delta-aminolevulinic acid dehydratase IN878_RS19730 PF03797 Autotransporter beta-domain IN878_RS19730 PF03212 Pertactin IN878_RS19735 PF15977 Winged helix-turn-helix DNA binding IN878_RS19740 PF00144 Beta-lactamase IN878_RS19745 PF05992 SbmA/BacA-like family IN878_RS19750 PF07759 Protein of unknown function (DUF1615) IN878_RS19755 PF10954 Protein of unknown function (DUF2755) IN878_RS19760 PF10953 Protein of unknown function (DUF2754) IN878_RS19765 PF01820 D-ala D-ala ligase N-terminus IN878_RS19765 PF07478 D-ala D-ala ligase C-terminus IN878_RS19775 PF10796 Sigma-S stabilisation anti-adaptor protein IN878_RS19780 PF00245 Alkaline phosphatase IN878_RS19785 PF07769 psiF repeat IN878_RS19790 PF05230 MASE2 domain IN878_RS19790 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS19795 PF03807 NADP oxidoreductase coenzyme F420-dependent IN878_RS19795 PF14748 Pyrroline-5-carboxylate reductase dimerisation IN878_RS19800 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IN878_RS19805 PF01202 Shikimate kinase IN878_RS19810 PF16362 YaiA protein IN878_RS19815 PF07302 AroM protein IN878_RS19820 PF06865 Pyrimidine/purine nucleoside phosphorylase IN878_RS19835 PF04381 Putative exonuclease, RdgC IN878_RS19840 PF00480 ROK family IN878_RS19845 PF07690 Major Facilitator Superfamily IN878_RS19850 PF13476 AAA domain IN878_RS19855 PF12320 Type 5 capsule protein repressor C-terminal domain IN878_RS19855 PF00149 Calcineurin-like phosphoesterase IN878_RS19860 PF00072 Response regulator receiver domain IN878_RS19860 PF00486 Transcriptional regulatory protein, C terminal IN878_RS19865 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS19865 PF00989 PAS fold IN878_RS19865 PF11808 Phosphate regulon sensor protein PhoR IN878_RS19865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS19870 PF05525 Branched-chain amino acid transport protein IN878_RS19875 PF00324 Amino acid permease IN878_RS19880 PF00128 Alpha amylase, catalytic domain IN878_RS19880 PF02903 Alpha amylase, N-terminal ig-like domain IN878_RS19885 PF04336 Acyl carrier protein phosphodiesterase IN878_RS19890 PF02547 Queuosine biosynthesis protein IN878_RS19895 PF01702 Queuine tRNA-ribosyltransferase IN878_RS19900 PF02699 Preprotein translocase subunit IN878_RS19905 PF13721 SecD export protein N-terminal TM region IN878_RS19905 PF07549 SecD/SecF GG Motif IN878_RS19905 PF02355 Protein export membrane protein IN878_RS19910 PF07549 SecD/SecF GG Motif IN878_RS19910 PF02355 Protein export membrane protein IN878_RS19915 PF01844 HNH endonuclease IN878_RS19920 PF03502 Nucleoside-specific channel-forming protein, Tsx IN878_RS19925 PF11622 Protein of unknown function (DUF3251) IN878_RS19930 PF03477 ATP cone domain IN878_RS19935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IN878_RS19935 PF01872 RibD C-terminal domain IN878_RS19940 PF00885 6,7-dimethyl-8-ribityllumazine synthase IN878_RS19945 PF01029 NusB family IN878_RS19950 PF00586 AIR synthase related protein, N-terminal domain IN878_RS19950 PF02769 AIR synthase related protein, C-terminal domain IN878_RS19955 PF04608 Phosphatidylglycerophosphatase A IN878_RS19960 PF00248 Aldo/keto reductase family IN878_RS19965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IN878_RS19965 PF02779 Transketolase, pyrimidine binding domain IN878_RS19965 PF02780 Transketolase, C-terminal domain IN878_RS19970 PF00348 Polyprenyl synthetase IN878_RS19975 PF02609 Exonuclease VII small subunit IN878_RS19980 PF02926 THUMP domain IN878_RS19980 PF02568 Thiamine biosynthesis protein (ThiI) IN878_RS19985 PF01965 DJ-1/PfpI family IN878_RS19990 PF08546 Ketopantoate reductase PanE/ApbA C terminal IN878_RS19990 PF02558 Ketopantoate reductase PanE/ApbA IN878_RS19995 PF04461 Protein of unknown function (DUF520) IN878_RS20000 PF07690 Major Facilitator Superfamily IN878_RS20005 PF01040 UbiA prenyltransferase family IN878_RS20010 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IN878_RS20015 PF00510 Cytochrome c oxidase subunit III IN878_RS20020 PF00115 Cytochrome C and Quinol oxidase polypeptide I IN878_RS20025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IN878_RS20025 PF06481 COX Aromatic Rich Motif IN878_RS20030 PF07690 Major Facilitator Superfamily IN878_RS20035 PF08139 Prokaryotic membrane lipoprotein lipid attachment site IN878_RS20035 PF03923 Uncharacterized lipoprotein IN878_RS20040 PF01722 BolA-like protein IN878_RS20045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IN878_RS20045 PF05697 Bacterial trigger factor protein (TF) IN878_RS20045 PF05698 Bacterial trigger factor protein (TF) C-terminus IN878_RS20050 PF00574 Clp protease IN878_RS20055 PF06689 ClpX C4-type zinc finger IN878_RS20055 PF07724 AAA domain (Cdc48 subfamily) IN878_RS20055 PF10431 C-terminal, D2-small domain, of ClpB protein IN878_RS20060 PF00004 ATPase family associated with various cellular activities (AAA) IN878_RS20060 PF05362 Lon protease (S16) C-terminal proteolytic domain IN878_RS20060 PF02190 ATP-dependent protease La (LON) substrate-binding domain IN878_RS20065 PF00216 Bacterial DNA-binding protein IN878_RS20070 PF13145 PPIC-type PPIASE domain IN878_RS20085 PF06508 Queuosine biosynthesis protein QueC IN878_RS20090 PF12793 Sugar transport-related sRNA regulator N-term IN878_RS20090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS20100 PF13404 AsnC-type helix-turn-helix domain IN878_RS20100 PF01037 Lrp/AsnC ligand binding domain IN878_RS20105 PF00005 ABC transporter IN878_RS20105 PF00664 ABC transporter transmembrane region IN878_RS20110 PF00005 ABC transporter IN878_RS20110 PF00664 ABC transporter transmembrane region IN878_RS20115 PF00543 Nitrogen regulatory protein P-II IN878_RS20120 PF00909 Ammonium Transporter Family IN878_RS20130 PF09619 Type III secretion system lipoprotein chaperone (YscW) IN878_RS20135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IN878_RS20145 PF07237 Protein of unknown function (DUF1428) IN878_RS20155 PF10777 Inner membrane protein YlaC IN878_RS20160 PF12464 Maltose acetyltransferase IN878_RS20160 PF14602 Hexapeptide repeat of succinyl-transferase IN878_RS20165 PF05321 Haemolysin expression modulating protein IN878_RS20170 PF10757 Biofilm formation regulator YbaJ IN878_RS20175 PF00873 AcrB/AcrD/AcrF family IN878_RS20180 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS20180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS20185 PF08361 MAATS-type transcriptional repressor, C-terminal region IN878_RS20185 PF00440 Bacterial regulatory proteins, tetR family IN878_RS20190 PF12795 Mechanosensitive ion channel porin domain IN878_RS20190 PF00924 Mechanosensitive ion channel IN878_RS20190 PF12794 Mechanosensitive ion channel inner membrane domain 1 IN878_RS20195 PF10689 Protein of unknown function (DUF2496) IN878_RS20200 PF07445 Primosomal replication protein priC IN878_RS20205 PF04304 Protein of unknown function (DUF454) IN878_RS20210 PF00156 Phosphoribosyl transferase domain IN878_RS20215 PF12169 DNA polymerase III subunits gamma and tau domain III IN878_RS20215 PF12170 DNA polymerase III tau subunit V interacting with alpha IN878_RS20215 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IN878_RS20220 PF02575 YbaB/EbfC DNA-binding family IN878_RS20225 PF13662 Toprim domain IN878_RS20225 PF02132 RecR protein IN878_RS20230 PF00183 Hsp90 protein IN878_RS20230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS20235 PF05191 Adenylate kinase, active site lid IN878_RS20240 PF00762 Ferrochelatase IN878_RS20245 PF07859 alpha/beta hydrolase fold IN878_RS20250 PF00294 pfkB family carbohydrate kinase IN878_RS20255 PF02254 TrkA-N domain IN878_RS20255 PF00999 Sodium/hydrogen exchanger family IN878_RS20260 PF07690 Major Facilitator Superfamily IN878_RS20265 PF00149 Calcineurin-like phosphoesterase IN878_RS20265 PF02872 5'-nucleotidase, C-terminal domain IN878_RS20270 PF04073 Aminoacyl-tRNA editing domain IN878_RS20275 PF01963 TraB family IN878_RS20280 PF01381 Helix-turn-helix IN878_RS20285 PF00403 Heavy-metal-associated domain IN878_RS20290 PF04960 Glutaminase IN878_RS20295 PF13520 Amino acid permease IN878_RS20300 PF13411 MerR HTH family regulatory protein IN878_RS20305 PF01957 NfeD-like C-terminal, partner-binding IN878_RS20310 PF01145 SPFH domain / Band 7 family IN878_RS20310 PF16200 C-terminal region of band_7 IN878_RS20315 PF00005 ABC transporter IN878_RS20320 PF03649 Uncharacterised protein family (UPF0014) IN878_RS20325 PF00085 Thioredoxin IN878_RS20330 PF00106 short chain dehydrogenase IN878_RS20335 PF13472 GDSL-like Lipase/Acylhydrolase family IN878_RS20340 PF00005 ABC transporter IN878_RS20350 PF05593 RHS Repeat IN878_RS20350 PF03527 RHS protein IN878_RS20350 PF14220 Domain of unknown function (DUF4329) IN878_RS20355 PF15631 NTF2 fold immunity protein IN878_RS20360 PF03527 RHS protein IN878_RS20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS20385 PF03466 LysR substrate binding domain IN878_RS20390 PF04115 Ureidoglycolate lyase IN878_RS20395 PF09339 IclR helix-turn-helix domain IN878_RS20395 PF01614 Bacterial transcriptional regulator IN878_RS20400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IN878_RS20400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS20400 PF00205 Thiamine pyrophosphate enzyme, central domain IN878_RS20405 PF01261 Xylose isomerase-like TIM barrel IN878_RS20410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IN878_RS20410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IN878_RS20415 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IN878_RS20420 PF01979 Amidohydrolase family IN878_RS20425 PF00860 Permease family IN878_RS20430 PF02595 Glycerate kinase family IN878_RS20435 PF05899 Protein of unknown function (DUF861) IN878_RS20435 PF07883 Cupin domain IN878_RS20440 PF01546 Peptidase family M20/M25/M40 IN878_RS20445 PF02615 Malate/L-lactate dehydrogenase IN878_RS20450 PF00549 CoA-ligase IN878_RS20450 PF02629 CoA binding domain IN878_RS20455 PF06545 Protein of unknown function (DUF1116) IN878_RS20460 PF11392 Protein of unknown function (DUF2877) IN878_RS20465 PF00696 Amino acid kinase family IN878_RS20470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IN878_RS20470 PF02222 ATP-grasp domain IN878_RS20475 PF00731 AIR carboxylase IN878_RS20480 PF12850 Calcineurin-like phosphoesterase superfamily domain IN878_RS20485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IN878_RS20490 PF01406 tRNA synthetases class I (C) catalytic domain IN878_RS20490 PF09190 DALR domain IN878_RS20495 PF04307 LexA-binding, inner membrane-associated putative hydrolase IN878_RS20505 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IN878_RS20505 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IN878_RS20510 PF00419 Fimbrial protein IN878_RS20515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS20515 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS20525 PF00419 Fimbrial protein IN878_RS20530 PF00419 Fimbrial protein IN878_RS20535 PF00196 Bacterial regulatory proteins, luxR family IN878_RS20535 PF00072 Response regulator receiver domain IN878_RS20545 PF12833 Helix-turn-helix domain IN878_RS20550 PF14488 Domain of unknown function (DUF4434) IN878_RS20555 PF13283 Bacteriophage N adsorption protein A C-term IN878_RS20560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IN878_RS20560 PF13632 Glycosyl transferase family group 2 IN878_RS20565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS20565 PF00672 HAMP domain IN878_RS20565 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS20570 PF00072 Response regulator receiver domain IN878_RS20570 PF00486 Transcriptional regulatory protein, C terminal IN878_RS20575 PF02321 Outer membrane efflux protein IN878_RS20580 PF11604 Copper binding periplasmic protein CusF IN878_RS20585 PF00529 HlyD membrane-fusion protein of T1SS IN878_RS20585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS20590 PF00873 AcrB/AcrD/AcrF family IN878_RS20595 PF00324 Amino acid permease IN878_RS20600 PF00924 Mechanosensitive ion channel IN878_RS20605 PF00881 Nitroreductase family IN878_RS20610 PF04237 YjbR IN878_RS20615 PF06643 Protein of unknown function (DUF1158) IN878_RS20620 PF04107 Glutamate-cysteine ligase family 2(GCS2) IN878_RS20625 PF01848 Hok/gef family IN878_RS20630 PF01609 Transposase DDE domain IN878_RS20635 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IN878_RS20635 PF01648 4'-phosphopantetheinyl transferase superfamily IN878_RS20640 PF00593 TonB dependent receptor IN878_RS20640 PF07715 TonB-dependent Receptor Plug Domain IN878_RS20645 PF11806 Domain of unknown function (DUF3327) IN878_RS20645 PF00756 Putative esterase IN878_RS20650 PF03621 MbtH-like protein IN878_RS20670 PF02706 Chain length determinant protein IN878_RS20675 PF00005 ABC transporter IN878_RS20680 PF01032 FecCD transport family IN878_RS20685 PF01032 FecCD transport family IN878_RS20690 PF05977 Transmembrane secretion effector IN878_RS20695 PF01497 Periplasmic binding protein IN878_RS20700 PF00425 chorismate binding enzyme IN878_RS20705 PF00501 AMP-binding enzyme IN878_RS20705 PF13193 AMP-binding enzyme C-terminal domain IN878_RS20710 PF00550 Phosphopantetheine attachment site IN878_RS20710 PF00857 Isochorismatase family IN878_RS20720 PF03061 Thioesterase superfamily IN878_RS20725 PF13722 5TM C-terminal transporter carbon starvation CstA IN878_RS20725 PF02554 Carbon starvation protein CstA IN878_RS20730 PF04328 Selenoprotein, putative IN878_RS20735 PF00465 Iron-containing alcohol dehydrogenase IN878_RS20740 PF00155 Aminotransferase class I and II IN878_RS20745 PF02195 ParB-like nuclease domain IN878_RS20750 PF11922 Domain of unknown function (DUF3440) IN878_RS20750 PF01507 Phosphoadenosine phosphosulfate reductase family IN878_RS20755 PF03466 LysR substrate binding domain IN878_RS20755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS20760 PF13098 Thioredoxin-like domain IN878_RS20765 PF00578 AhpC/TSA family IN878_RS20765 PF10417 C-terminal domain of 1-Cys peroxiredoxin IN878_RS20770 PF13192 Thioredoxin domain IN878_RS20770 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS20775 PF00582 Universal stress protein family IN878_RS20780 PF00107 Zinc-binding dehydrogenase IN878_RS20780 PF13823 Alcohol dehydrogenase GroES-associated IN878_RS20780 PF08240 Alcohol dehydrogenase GroES-like domain IN878_RS20785 PF14760 Rnk N-terminus IN878_RS20785 PF01272 Transcription elongation factor, GreA/GreB, C-term IN878_RS20790 PF00445 Ribonuclease T2 family IN878_RS20795 PF00939 Sodium:sulfate symporter transmembrane region IN878_RS20800 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IN878_RS20805 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase IN878_RS20810 PF04223 Citrate lyase, alpha subunit (CitF) IN878_RS20815 PF03328 HpcH/HpaI aldolase/citrate lyase family IN878_RS20820 PF06857 Malonate decarboxylase delta subunit (MdcD) IN878_RS20825 PF08218 Citrate lyase ligase C-terminal domain IN878_RS20830 PF00989 PAS fold IN878_RS20830 PF17203 Single cache domain 3 IN878_RS20830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IN878_RS20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS20835 PF12431 Transcriptional regulator IN878_RS20835 PF00072 Response regulator receiver domain IN878_RS20840 PF03606 C4-dicarboxylate anaerobic carrier IN878_RS20845 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP IN878_RS20850 PF00313 'Cold-shock' DNA-binding domain IN878_RS20855 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IN878_RS20865 PF02416 mttA/Hcf106 family IN878_RS20870 PF04055 Radical SAM superfamily IN878_RS20870 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IN878_RS20875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS20875 PF03466 LysR substrate binding domain IN878_RS20880 PF03099 Biotin/lipoate A/B protein ligase family IN878_RS20885 PF04359 Protein of unknown function (DUF493) IN878_RS20890 PF00768 D-alanyl-D-alanine carboxypeptidase IN878_RS20890 PF07943 Penicillin-binding protein 5, C-terminal domain IN878_RS20895 PF03330 Lytic transglycolase IN878_RS20895 PF05036 Sporulation related domain IN878_RS20900 PF01098 Cell cycle protein IN878_RS20905 PF00905 Penicillin binding protein transpeptidase domain IN878_RS20905 PF03717 Penicillin-binding Protein dimerisation domain IN878_RS20910 PF02590 Predicted SPOUT methyltransferase IN878_RS20920 PF00300 Histidine phosphatase superfamily (branch 1) IN878_RS20925 PF01467 Cytidylyltransferase-like IN878_RS20930 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IN878_RS20930 PF06144 DNA polymerase III, delta subunit IN878_RS20935 PF04390 Lipopolysaccharide-assembly IN878_RS20940 PF13603 Leucyl-tRNA synthetase, Domain 2 IN878_RS20940 PF00133 tRNA synthetases class I (I, L, M and V) IN878_RS20940 PF08264 Anticodon-binding domain of tRNA IN878_RS20945 PF07295 Zinc-ribbon containing domain IN878_RS20950 PF08238 Sel1 repeat IN878_RS20955 PF06889 Protein of unknown function (DUF1266) IN878_RS20965 PF08238 Sel1 repeat IN878_RS20970 PF06889 Protein of unknown function (DUF1266) IN878_RS20980 PF00012 Hsp70 protein IN878_RS20985 PF01156 Inosine-uridine preferring nucleoside hydrolase IN878_RS20990 PF00005 ABC transporter IN878_RS20995 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS21000 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS21005 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS21010 PF00795 Carbon-nitrogen hydrolase IN878_RS21015 PF00571 CBS domain IN878_RS21015 PF03471 Transporter associated domain IN878_RS21020 PF02130 Uncharacterized protein family UPF0054 IN878_RS21025 PF02562 PhoH-like protein IN878_RS21030 PF00919 Uncharacterized protein family UPF0004 IN878_RS21030 PF04055 Radical SAM superfamily IN878_RS21030 PF01938 TRAM domain IN878_RS21035 PF01494 FAD binding domain IN878_RS21075 PF00733 Asparagine synthase IN878_RS21075 PF13537 Glutamine amidotransferase domain IN878_RS21080 PF13344 Haloacid dehalogenase-like hydrolase IN878_RS21085 PF01047 MarR family IN878_RS21085 PF00480 ROK family IN878_RS21090 PF01979 Amidohydrolase family IN878_RS21095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IN878_RS21100 PF00367 phosphotransferase system, EIIB IN878_RS21100 PF02378 Phosphotransferase system, EIIC IN878_RS21100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IN878_RS21105 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IN878_RS21105 PF00749 tRNA synthetases class I (E and Q), catalytic domain IN878_RS21110 PF03573 outer membrane porin, OprD family IN878_RS21115 PF13982 YbfN-like lipoprotein IN878_RS21120 PF01475 Ferric uptake regulator family IN878_RS21130 PF00258 Flavodoxin IN878_RS21135 PF01402 Ribbon-helix-helix protein, copG family IN878_RS21140 PF12697 Alpha/beta hydrolase family IN878_RS21145 PF17206 SeqA protein N-terminal domain IN878_RS21145 PF03925 SeqA protein C-terminal domain IN878_RS21150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IN878_RS21150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IN878_RS21150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IN878_RS21150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IN878_RS21160 PF10946 Protein of unknown function DUF2625 IN878_RS21170 PF13520 Amino acid permease IN878_RS21175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IN878_RS21175 PF01276 Orn/Lys/Arg decarboxylase, major domain IN878_RS21175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IN878_RS21185 PF00486 Transcriptional regulatory protein, C terminal IN878_RS21185 PF00072 Response regulator receiver domain IN878_RS21190 PF02702 Osmosensitive K+ channel His kinase sensor domain IN878_RS21190 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS21190 PF13493 Domain of unknown function (DUF4118) IN878_RS21190 PF13492 GAF domain IN878_RS21190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS21195 PF02669 K+-transporting ATPase, c chain IN878_RS21205 PF03814 Potassium-transporting ATPase A subunit IN878_RS21210 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) IN878_RS21215 PF10725 Protein of unknown function (DUF2517) IN878_RS21220 PF03527 RHS protein IN878_RS21220 PF05593 RHS Repeat IN878_RS21240 PF08349 Protein of unknown function (DUF1722) IN878_RS21245 PF00875 DNA photolyase IN878_RS21245 PF03441 FAD binding domain of DNA photolyase IN878_RS21250 PF00854 POT family IN878_RS21255 PF01784 NIF3 (NGG1p interacting factor 3) IN878_RS21260 PF02682 Carboxyltransferase domain, subdomain C and D IN878_RS21265 PF02626 Carboxyltransferase domain, subdomain A and B IN878_RS21270 PF03746 LamB/YcsF family IN878_RS21275 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IN878_RS21275 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IN878_RS21275 PF06827 Zinc finger found in FPG and IleRS IN878_RS21280 PF05145 Transition state regulatory protein AbrB IN878_RS21285 PF00419 Fimbrial protein IN878_RS21290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS21290 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS21295 PF13954 PapC N-terminal domain IN878_RS21295 PF13953 PapC C-terminal domain IN878_RS21295 PF00577 Outer membrane usher protein IN878_RS21300 PF00419 Fimbrial protein IN878_RS21305 PF00285 Citrate synthase, C-terminal domain IN878_RS21315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IN878_RS21320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IN878_RS21325 PF00890 FAD binding domain IN878_RS21325 PF02910 Fumarate reductase flavoprotein C-term IN878_RS21330 PF13085 2Fe-2S iron-sulfur cluster binding domain IN878_RS21335 PF16870 2-oxoglutarate dehydrogenase C-terminal IN878_RS21335 PF00676 Dehydrogenase E1 component IN878_RS21335 PF16078 2-oxoglutarate dehydrogenase N-terminus IN878_RS21335 PF02779 Transketolase, pyrimidine binding domain IN878_RS21340 PF02817 e3 binding domain IN878_RS21340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IN878_RS21340 PF00364 Biotin-requiring enzyme IN878_RS21345 PF08442 ATP-grasp domain IN878_RS21345 PF00549 CoA-ligase IN878_RS21350 PF02629 CoA binding domain IN878_RS21350 PF00549 CoA-ligase IN878_RS21355 PF07702 UTRA domain IN878_RS21355 PF00392 Bacterial regulatory proteins, gntR family IN878_RS21360 PF02378 Phosphotransferase system, EIIC IN878_RS21360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IN878_RS21360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IN878_RS21365 PF01074 Glycosyl hydrolases family 38 N-terminal domain IN878_RS21365 PF07748 Glycosyl hydrolases family 38 C-terminal domain IN878_RS21365 PF09261 Alpha mannosidase middle domain IN878_RS21370 PF01654 Cytochrome bd terminal oxidase subunit I IN878_RS21375 PF02322 Cytochrome bd terminal oxidase subunit II IN878_RS21380 PF08173 Membrane bound YbgT-like protein IN878_RS21385 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) IN878_RS21390 PF03061 Thioesterase superfamily IN878_RS21395 PF01618 MotA/TolQ/ExbB proton channel family IN878_RS21400 PF02472 Biopolymer transport protein ExbD/TolR IN878_RS21405 PF06519 TolA C-terminal IN878_RS21410 PF04052 TolB amino-terminal domain IN878_RS21410 PF07676 WD40-like Beta Propeller Repeat IN878_RS21415 PF00691 OmpA family IN878_RS21420 PF13174 Tetratricopeptide repeat IN878_RS21420 PF16331 TolA binding protein trimerisation IN878_RS21465 PF02445 Quinolinate synthetase A protein IN878_RS21470 PF04973 Nicotinamide mononucleotide transporter IN878_RS21475 PF01545 Cation efflux family IN878_RS21480 PF13985 YbgS-like protein IN878_RS21485 PF00793 DAHP synthetase I family IN878_RS21490 PF00300 Histidine phosphatase superfamily (branch 1) IN878_RS21495 PF01263 Aldose 1-epimerase IN878_RS21500 PF10509 Galactokinase galactose-binding signature IN878_RS21500 PF08544 GHMP kinases C terminal IN878_RS21500 PF00288 GHMP kinases N terminal domain IN878_RS21505 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IN878_RS21505 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IN878_RS21510 PF16363 GDP-mannose 4,6 dehydratase IN878_RS21515 PF00005 ABC transporter IN878_RS21520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS21520 PF03459 TOBE domain IN878_RS21525 PF10766 Multidrug efflux pump-associated protein AcrZ IN878_RS21535 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS21540 PF00005 ABC transporter IN878_RS21540 PF03459 TOBE domain IN878_RS21550 PF10282 Lactonase, 7-bladed beta-propeller IN878_RS21555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS21555 PF03466 LysR substrate binding domain IN878_RS21560 PF04303 PrpF protein IN878_RS21565 PF00939 Sodium:sulfate symporter transmembrane region IN878_RS21570 PF00330 Aconitase family (aconitate hydratase) IN878_RS21570 PF00694 Aconitase C-terminal domain IN878_RS21575 PF01095 Pectinesterase IN878_RS21580 PF00589 Phage integrase family IN878_RS21580 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain IN878_RS21655 PF07102 Protein of unknown function (DUF1364) IN878_RS21660 PF05866 Endodeoxyribonuclease RusA IN878_RS21670 PF06530 Phage antitermination protein Q IN878_RS21675 PF00267 Gram-negative porin IN878_RS21680 PF04971 Bacteriophage P21 holin S IN878_RS21685 PF00959 Phage lysozyme IN878_RS21690 PF06085 Lipoprotein Rz1 precursor IN878_RS21695 PF06291 Bor protein IN878_RS21700 PF13132 Domain of unknown function (DUF3950) IN878_RS21730 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IN878_RS21740 PF12833 Helix-turn-helix domain IN878_RS21755 PF01161 Phosphatidylethanolamine-binding protein IN878_RS21760 PF00202 Aminotransferase class-III IN878_RS21765 PF04055 Radical SAM superfamily IN878_RS21765 PF06968 Biotin and Thiamin Synthesis associated domain IN878_RS21770 PF00155 Aminotransferase class I and II IN878_RS21775 PF08241 Methyltransferase domain IN878_RS21785 PF04851 Type III restriction enzyme, res subunit IN878_RS21785 PF12344 Ultra-violet resistance protein B IN878_RS21785 PF00271 Helicase conserved C-terminal domain IN878_RS21785 PF02151 UvrB/uvrC motif IN878_RS21785 PF17757 UvrB interaction domain IN878_RS21790 PF01933 Uncharacterised protein family UPF0052 IN878_RS21795 PF04055 Radical SAM superfamily IN878_RS21795 PF06463 Molybdenum Cofactor Synthesis C IN878_RS21800 PF00994 Probable molybdopterin binding domain IN878_RS21805 PF01967 MoaC family IN878_RS21810 PF02597 ThiS family IN878_RS21815 PF02391 MoaE protein IN878_RS21820 PF01027 Inhibitor of apoptosis-promoting Bax1 IN878_RS21825 PF01027 Inhibitor of apoptosis-promoting Bax1 IN878_RS21830 PF03706 Lysylphosphatidylglycerol synthase TM region IN878_RS21835 PF13091 PLD-like domain IN878_RS21840 PF03372 Endonuclease/Exonuclease/phosphatase family IN878_RS21845 PF11076 Putative inner membrane protein YbhQ IN878_RS21860 PF00005 ABC transporter IN878_RS21865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS21870 PF09209 Tetracyclin repressor-like, C-terminal domain IN878_RS21870 PF00440 Bacterial regulatory proteins, tetR family IN878_RS21875 PF00271 Helicase conserved C-terminal domain IN878_RS21875 PF00270 DEAD/DEAH box helicase IN878_RS21880 PF08719 Domain of unknown function (DUF1768) IN878_RS21885 PF06733 DEAD_2 IN878_RS21885 PF00270 DEAD/DEAH box helicase IN878_RS21885 PF13307 Helicase C-terminal domain IN878_RS21890 PF02885 Glycosyl transferase family, helical bundle domain IN878_RS21895 PF02615 Malate/L-lactate dehydrogenase IN878_RS21900 PF07338 Protein of unknown function (DUF1471) IN878_RS21905 PF01258 Prokaryotic dksA/traR C4-type zinc finger IN878_RS21910 PF18331 PKHD-type hydroxylase C-terminal domain IN878_RS21910 PF13640 2OG-Fe(II) oxygenase superfamily IN878_RS21915 PF07715 TonB-dependent Receptor Plug Domain IN878_RS21915 PF00593 TonB dependent receptor IN878_RS21920 PF07338 Protein of unknown function (DUF1471) IN878_RS21925 PF05971 RNA methyltransferase IN878_RS21930 PF00924 Mechanosensitive ion channel IN878_RS21935 PF00005 ABC transporter IN878_RS21940 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS21945 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS21950 PF00210 Ferritin-like domain IN878_RS21955 PF00892 EamA-like transporter family IN878_RS21965 PF13505 Outer membrane protein beta-barrel domain IN878_RS21970 PF00884 Sulfatase IN878_RS21980 PF01325 Iron dependent repressor, N-terminal DNA binding domain IN878_RS21980 PF02742 Iron dependent repressor, metal binding and dimerisation domain IN878_RS21985 PF03600 Citrate transporter IN878_RS21990 PF17969 L,D-transpeptidase C-terminal domain IN878_RS21990 PF03734 L,D-transpeptidase catalytic domain IN878_RS21995 PF12848 ABC transporter IN878_RS21995 PF00005 ABC transporter IN878_RS22000 PF07350 Protein of unknown function (DUF1479) IN878_RS22010 PF02901 Pyruvate formate lyase-like IN878_RS22010 PF01228 Glycine radical IN878_RS22015 PF04055 Radical SAM superfamily IN878_RS22020 PF00923 Transaldolase/Fructose-6-phosphate aldolase IN878_RS22025 PF00899 ThiF family IN878_RS22030 PF03453 MoeA N-terminal region (domain I and II) IN878_RS22030 PF00994 Probable molybdopterin binding domain IN878_RS22030 PF03454 MoeA C-terminal region (domain IV) IN878_RS22035 PF01112 Asparaginase IN878_RS22040 PF00005 ABC transporter IN878_RS22040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IN878_RS22045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IN878_RS22050 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS22055 PF12911 N-terminal TM domain of oligopeptide transport permease C IN878_RS22055 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS22060 PF00563 EAL domain IN878_RS22060 PF17153 Periplasmic sensor domain, extracellular IN878_RS22065 PF17156 Gammaproteobacterial periplasmic sensor domain IN878_RS22065 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS22070 PF00919 Uncharacterized protein family UPF0004 IN878_RS22070 PF18693 TRAM domain IN878_RS22070 PF04055 Radical SAM superfamily IN878_RS22075 PF10799 Biofilm formation protein (YliH/bssR) IN878_RS22080 PF07995 Glucose / Sorbosone dehydrogenase IN878_RS22085 PF13417 Glutathione S-transferase, N-terminal domain IN878_RS22085 PF00043 Glutathione S-transferase, C-terminal domain IN878_RS22090 PF00768 D-alanyl-D-alanine carboxypeptidase IN878_RS22090 PF07943 Penicillin-binding protein 5, C-terminal domain IN878_RS22095 PF00455 DeoR C terminal sensor domain IN878_RS22095 PF08220 DeoR-like helix-turn-helix domain IN878_RS22100 PF01569 PAP2 superfamily IN878_RS22105 PF07690 Major Facilitator Superfamily IN878_RS22120 PF07690 Major Facilitator Superfamily IN878_RS22125 PF00440 Bacterial regulatory proteins, tetR family IN878_RS22130 PF02080 TrkA-C domain IN878_RS22130 PF06826 Predicted Permease Membrane Region IN878_RS22135 PF11045 Putative inner membrane protein of Enterobacteriaceae IN878_RS22140 PF00462 Glutaredoxin IN878_RS22145 PF07214 Protein of unknown function (DUF1418) IN878_RS22150 PF00881 Nitroreductase family IN878_RS22155 PF08443 RimK-like ATP-grasp domain IN878_RS22155 PF18030 RimK PreATP-grasp domain IN878_RS22160 PF10722 Putative bacterial sensory transduction regulator IN878_RS22165 PF13416 Bacterial extracellular solute-binding protein IN878_RS22170 PF00005 ABC transporter IN878_RS22170 PF08402 TOBE domain IN878_RS22175 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS22180 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS22185 PF10767 Protein of unknown function (DUF2593) IN878_RS22190 PF05958 tRNA (Uracil-5-)-methyltransferase IN878_RS22195 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS22200 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS22205 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS22210 PF00497 Bacterial extracellular solute-binding proteins, family 3 IN878_RS22215 PF00005 ABC transporter IN878_RS22220 PF12883 Protein of unknown function (DUF3828) IN878_RS22225 PF01906 Putative heavy-metal-binding IN878_RS22230 PF01510 N-acetylmuramoyl-L-alanine amidase IN878_RS22235 PF01370 NAD dependent epimerase/dehydratase family IN878_RS22240 PF13460 NAD(P)H-binding IN878_RS22240 PF11066 Protein of unknown function (DUF2867) IN878_RS22245 PF01212 Beta-eliminating lyase IN878_RS22250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IN878_RS22250 PF00205 Thiamine pyrophosphate enzyme, central domain IN878_RS22250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IN878_RS22255 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS22255 PF00175 Oxidoreductase NAD-binding domain IN878_RS22255 PF00970 Oxidoreductase FAD-binding domain IN878_RS22260 PF03063 Prismane/CO dehydrogenase family IN878_RS22265 PF03956 Lysine exporter LysO IN878_RS22270 PF00230 Major intrinsic protein IN878_RS22275 PF11398 Protein of unknown function (DUF2813) IN878_RS22280 PF04393 Protein of unknown function (DUF535) IN878_RS22285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IN878_RS22290 PF02687 FtsX-like permease family IN878_RS22290 PF00005 ABC transporter IN878_RS22290 PF12704 MacB-like periplasmic core domain IN878_RS22295 PF00313 'Cold-shock' DNA-binding domain IN878_RS22300 PF02617 ATP-dependent Clp protease adaptor protein ClpS IN878_RS22305 PF02861 Clp amino terminal domain, pathogenicity island component IN878_RS22305 PF10431 C-terminal, D2-small domain, of ClpB protein IN878_RS22305 PF07724 AAA domain (Cdc48 subfamily) IN878_RS22305 PF17871 AAA lid domain IN878_RS22305 PF00004 ATPase family associated with various cellular activities (AAA) IN878_RS22315 PF01176 Translation initiation factor 1A / IF-1 IN878_RS22320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IN878_RS22325 PF00005 ABC transporter IN878_RS22325 PF00664 ABC transporter transmembrane region IN878_RS22330 PF00664 ABC transporter transmembrane region IN878_RS22330 PF00005 ABC transporter IN878_RS22335 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS22340 PF01037 Lrp/AsnC ligand binding domain IN878_RS22345 PF01580 FtsK/SpoIIIE family IN878_RS22345 PF09397 Ftsk gamma domain IN878_RS22345 PF17854 FtsK alpha domain IN878_RS22345 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IN878_RS22350 PF03548 Outer membrane lipoprotein carrier protein LolA IN878_RS22355 PF12002 MgsA AAA+ ATPase C terminal IN878_RS22355 PF16193 AAA C-terminal domain IN878_RS22355 PF00004 ATPase family associated with various cellular activities (AAA) IN878_RS22360 PF02403 Seryl-tRNA synthetase N-terminal domain IN878_RS22360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IN878_RS22365 PF00384 Molybdopterin oxidoreductase IN878_RS22365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IN878_RS22365 PF01568 Molydopterin dinucleotide binding domain IN878_RS22370 PF12800 4Fe-4S binding domain IN878_RS22370 PF13247 4Fe-4S dicluster domain IN878_RS22375 PF04976 DMSO reductase anchor subunit (DmsC) IN878_RS22380 PF00857 Isochorismatase family IN878_RS22385 PF07690 Major Facilitator Superfamily IN878_RS22390 PF13520 Amino acid permease IN878_RS22395 PF03466 LysR substrate binding domain IN878_RS22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS22400 PF02525 Flavodoxin-like fold IN878_RS22405 PF04055 Radical SAM superfamily IN878_RS22410 PF00589 Phage integrase family IN878_RS22410 PF02899 Phage integrase, N-terminal SAM-like domain IN878_RS22455 PF05840 Bacteriophage replication gene A protein (GPA) IN878_RS22570 PF03335 Phage tail fibre repeat IN878_RS22570 PF07484 Phage Tail Collar Domain IN878_RS22570 PF08400 Prophage tail fibre N-terminal IN878_RS22575 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IN878_RS22630 PF04606 Ogr/Delta-like zinc finger IN878_RS22635 PF01228 Glycine radical IN878_RS22635 PF02901 Pyruvate formate lyase-like IN878_RS22640 PF01226 Formate/nitrite transporter IN878_RS22645 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IN878_RS22645 PF18381 YcaO cyclodehydratase C-terminal domain IN878_RS22650 PF04239 Protein of unknown function (DUF421) IN878_RS22655 PF00266 Aminotransferase class-V IN878_RS22660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IN878_RS22665 PF01435 Peptidase family M48 IN878_RS22670 PF02224 Cytidylate kinase IN878_RS22675 PF00575 S1 RNA binding domain IN878_RS22680 PF00216 Bacterial DNA-binding protein IN878_RS22685 PF00753 Metallo-beta-lactamase superfamily IN878_RS22685 PF03772 Competence protein IN878_RS22690 PF00664 ABC transporter transmembrane region IN878_RS22690 PF00005 ABC transporter IN878_RS22695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IN878_RS22700 PF06224 Winged helix DNA-binding domain IN878_RS22705 PF03966 Trm112p-like protein IN878_RS22710 PF02348 Cytidylyltransferase IN878_RS22715 PF01636 Phosphotransferase enzyme family IN878_RS22720 PF02698 DUF218 domain IN878_RS22725 PF13847 Methyltransferase domain IN878_RS22730 PF17193 MukF C-terminal domain IN878_RS22730 PF17192 MukF middle domain IN878_RS22730 PF03882 MukF winged-helix domain IN878_RS22735 PF04288 MukE-like family IN878_RS22740 PF04310 MukB N-terminal IN878_RS22740 PF16330 MukB hinge domain IN878_RS22745 PF01471 Putative peptidoglycan binding domain IN878_RS22745 PF03734 L,D-transpeptidase catalytic domain IN878_RS22750 PF05951 Bacterial protein of unknown function (DUF882) IN878_RS22755 PF00753 Metallo-beta-lactamase superfamily IN878_RS22760 PF00155 Aminotransferase class I and II IN878_RS22765 PF00267 Gram-negative porin IN878_RS22770 PF01336 OB-fold nucleic acid binding domain IN878_RS22770 PF00152 tRNA synthetases class II (D, K and N) IN878_RS22775 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IN878_RS22775 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IN878_RS22780 PF11940 Domain of unknown function (DUF3458) Ig-like fold IN878_RS22780 PF01433 Peptidase family M1 domain IN878_RS22780 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IN878_RS22785 PF00005 ABC transporter IN878_RS22790 PF00528 Binding-protein-dependent transport system inner membrane component IN878_RS22795 PF00296 Luciferase-like monooxygenase IN878_RS22800 PF09084 NMT1/THI5 like IN878_RS22805 PF03358 NADPH-dependent FMN reductase IN878_RS22810 PF00419 Fimbrial protein IN878_RS22815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS22815 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS22820 PF13954 PapC N-terminal domain IN878_RS22820 PF00577 Outer membrane usher protein IN878_RS22820 PF13953 PapC C-terminal domain IN878_RS22825 PF00419 Fimbrial protein IN878_RS22830 PF00419 Fimbrial protein IN878_RS22835 PF00419 Fimbrial protein IN878_RS22840 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS22840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS22845 PF01180 Dihydroorotate dehydrogenase IN878_RS22850 PF07126 Cell-division protein ZapC IN878_RS22855 PF00111 2Fe-2S iron-sulfur cluster binding domain IN878_RS22855 PF03473 MOSC domain IN878_RS22855 PF03476 MOSC N-terminal beta barrel domain IN878_RS22860 PF01170 Putative RNA methylase family UPF0020 IN878_RS22860 PF02926 THUMP domain IN878_RS22860 PF10672 S-adenosylmethionine-dependent methyltransferase IN878_RS22865 PF16326 ABC transporter C-terminal domain IN878_RS22865 PF12848 ABC transporter IN878_RS22865 PF00005 ABC transporter IN878_RS22870 PF04403 Paraquat-inducible protein A IN878_RS22875 PF02470 MlaD protein IN878_RS22880 PF03886 ABC-type transport auxiliary lipoprotein component IN878_RS22885 PF04957 Ribosome modulation factor IN878_RS22890 PF07977 FabA-like domain IN878_RS22895 PF05362 Lon protease (S16) C-terminal proteolytic domain IN878_RS22895 PF13654 AAA domain IN878_RS22900 PF06303 MatP N-terminal domain IN878_RS22900 PF17414 MatP C-terminal ribbon-helix-helix domain IN878_RS22905 PF01389 OmpA-like transmembrane domain IN878_RS22905 PF00691 OmpA family IN878_RS22910 PF03846 Cell division inhibitor SulA IN878_RS22915 PF04993 TfoX N-terminal domain IN878_RS22915 PF04994 TfoX C-terminal domain IN878_RS22920 PF12805 FUSC-like inner membrane protein yccS IN878_RS22925 PF03733 Inner membrane component domain IN878_RS22930 PF00580 UvrD/REP helicase N-terminal domain IN878_RS22930 PF13361 UvrD-like helicase C-terminal domain IN878_RS22930 PF12462 DNA helicase IV / RNA helicase N terminal IN878_RS22935 PF02142 MGS-like domain IN878_RS22940 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IN878_RS22945 PF13380 CoA binding domain IN878_RS22950 PF08755 Hemimethylated DNA-binding protein YccV like IN878_RS22955 PF17785 PUA-like domain IN878_RS22955 PF10672 S-adenosylmethionine-dependent methyltransferase IN878_RS22960 PF00708 Acylphosphatase IN878_RS22965 PF04358 DsrC like protein IN878_RS22970 PF01027 Inhibitor of apoptosis-promoting Bax1 IN878_RS22980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal IN878_RS22980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IN878_RS22985 PF00374 Nickel-dependent hydrogenase IN878_RS22990 PF01292 Prokaryotic cytochrome b561 IN878_RS22995 PF01750 Hydrogenase maturation protease IN878_RS23000 PF07449 Hydrogenase-1 expression protein HyaE IN878_RS23005 PF04809 HupH hydrogenase expression protein, C-terminal conserved region IN878_RS23010 PF01654 Cytochrome bd terminal oxidase subunit I IN878_RS23015 PF02322 Cytochrome bd terminal oxidase subunit II IN878_RS23020 PF08173 Membrane bound YbgT-like protein IN878_RS23025 PF00328 Histidine phosphatase superfamily (branch 2) IN878_RS23030 PF13807 G-rich domain on putative tyrosine kinase IN878_RS23030 PF02706 Chain length determinant protein IN878_RS23030 PF13614 AAA domain IN878_RS23035 PF01451 Low molecular weight phosphotyrosine protein phosphatase IN878_RS23040 PF02563 Polysaccharide biosynthesis/export protein IN878_RS23040 PF10531 SLBB domain IN878_RS23040 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IN878_RS23045 PF06082 Exopolysaccharide biosynthesis protein YbjH IN878_RS23050 PF06251 Capsule biosynthesis GfcC IN878_RS23055 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF IN878_RS23065 PF00313 'Cold-shock' DNA-binding domain IN878_RS23070 PF00313 'Cold-shock' DNA-binding domain IN878_RS23080 PF15939 Putative antitoxin of bacterial toxin-antitoxin system IN878_RS23085 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system IN878_RS23090 PF12801 4Fe-4S binding domain IN878_RS23095 PF01627 Hpt domain IN878_RS23095 PF00512 His Kinase A (phospho-acceptor) domain IN878_RS23095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IN878_RS23095 PF00672 HAMP domain IN878_RS23095 PF00072 Response regulator receiver domain IN878_RS23100 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IN878_RS23105 PF00486 Transcriptional regulatory protein, C terminal IN878_RS23105 PF00072 Response regulator receiver domain IN878_RS23110 PF03264 NapC/NirT cytochrome c family, N-terminal region IN878_RS23115 PF00384 Molybdopterin oxidoreductase IN878_RS23115 PF18364 Molybdopterin oxidoreductase N-terminal domain IN878_RS23115 PF01568 Molydopterin dinucleotide binding domain IN878_RS23120 PF02613 Nitrate reductase delta subunit IN878_RS23130 PF01556 DnaJ C terminal domain IN878_RS23130 PF00226 DnaJ domain IN878_RS23145 PF13993 YccJ-like protein IN878_RS23150 PF03358 NADPH-dependent FMN reductase IN878_RS23155 PF10685 Stress-induced bacterial acidophilic repeat motif IN878_RS23160 PF00860 Permease family IN878_RS23165 PF01613 Flavin reductase like domain IN878_RS23170 PF00881 Nitroreductase family IN878_RS23175 PF12697 Alpha/beta hydrolase family IN878_RS23180 PF01042 Endoribonuclease L-PSP IN878_RS23185 PF00857 Isochorismatase family IN878_RS23190 PF00296 Luciferase-like monooxygenase IN878_RS23195 PF00440 Bacterial regulatory proteins, tetR family IN878_RS23195 PF08362 YcdC-like protein, C-terminal region IN878_RS23200 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IN878_RS23200 PF14850 DNA-binding domain of Proline dehydrogenase IN878_RS23200 PF01619 Proline dehydrogenase IN878_RS23200 PF00171 Aldehyde dehydrogenase family IN878_RS23210 PF00474 Sodium:solute symporter family IN878_RS23220 PF03239 Iron permease FTR1 family IN878_RS23225 PF13473 Cupredoxin-like domain IN878_RS23225 PF09375 Imelysin IN878_RS23230 PF04261 Dyp-type peroxidase family IN878_RS23235 PF02562 PhoH-like protein IN878_RS23240 PF13994 PgaD-like protein IN878_RS23245 PF00535 Glycosyl transferase family 2 IN878_RS23250 PF01522 Polysaccharide deacetylase IN878_RS23250 PF14883 Hypothetical glycosyl hydrolase family 13 IN878_RS23260 PF17158 Membrane-associated sensor, integral membrane domain IN878_RS23260 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS23280 PF13356 Arm DNA-binding domain IN878_RS23280 PF00589 Phage integrase family IN878_RS23315 PF07728 AAA domain (dynein-related subfamily) IN878_RS23315 PF12102 Domain of unknown function (DUF3578) IN878_RS23325 PF13737 Transposase DDE domain IN878_RS23330 PF17158 Membrane-associated sensor, integral membrane domain IN878_RS23330 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS23340 PF01522 Polysaccharide deacetylase IN878_RS23340 PF14883 Hypothetical glycosyl hydrolase family 13 IN878_RS23345 PF00535 Glycosyl transferase family 2 IN878_RS23350 PF13994 PgaD-like protein IN878_RS23355 PF02562 PhoH-like protein IN878_RS23360 PF13276 HTH-like domain IN878_RS23360 PF01527 Transposase IN878_RS23360 PF00665 Integrase core domain IN878_RS23365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IN878_RS23365 PF00356 Bacterial regulatory proteins, lacI family IN878_RS23370 PF16874 Glycosyl hydrolase family 36 C-terminal domain IN878_RS23370 PF16875 Glycosyl hydrolase family 36 N-terminal domain IN878_RS23375 PF01306 LacY proton/sugar symporter IN878_RS23380 PF08244 Glycosyl hydrolases family 32 C terminal IN878_RS23380 PF00251 Glycosyl hydrolases family 32 N-terminal domain IN878_RS23385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IN878_RS23400 PF00294 pfkB family carbohydrate kinase IN878_RS23405 PF02264 LamB porin IN878_RS23405 PF11471 Maltoporin periplasmic N-terminal extension IN878_RS23430 PF02652 L-lactate permease IN878_RS23435 PF01565 FAD binding domain IN878_RS23435 PF09330 D-lactate dehydrogenase, membrane binding IN878_RS23440 PF02754 Cysteine-rich domain IN878_RS23445 PF11870 Domain of unknown function (DUF3390) IN878_RS23445 PF13183 4Fe-4S dicluster domain IN878_RS23445 PF02589 LUD domain IN878_RS23450 PF02589 LUD domain IN878_RS23460 PF05598 Transposase domain (DUF772) IN878_RS23460 PF01609 Transposase DDE domain IN878_RS23465 PF00267 Gram-negative porin IN878_RS23485 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IN878_RS23485 PF12008 Type I restriction and modification enzyme - subunit R C terminal IN878_RS23485 PF18766 SWI2/SNF2 ATPase IN878_RS23490 PF01420 Type I restriction modification DNA specificity domain IN878_RS23495 PF12161 HsdM N-terminal domain IN878_RS23495 PF02384 N-6 DNA Methylase IN878_RS23505 PF00350 Dynamin family IN878_RS23540 PF00239 Resolvase, N terminal domain IN878_RS23540 PF02796 Helix-turn-helix domain of resolvase IN878_RS23545 PF13610 DDE domain IN878_RS23560 PF13599 Pentapeptide repeats (9 copies) IN878_RS23565 PF13610 DDE domain IN878_RS23595 PF00589 Phage integrase family IN878_RS23625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IN878_RS23625 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS23635 PF05717 IS66 Orf2 like protein IN878_RS23655 PF02195 ParB-like nuclease domain IN878_RS23655 PF18090 Centromere-binding protein HTH domain IN878_RS23660 PF13614 AAA domain IN878_RS23665 PF01051 Initiator Replication protein IN878_RS23670 PF13737 Transposase DDE domain IN878_RS23695 PF01051 Initiator Replication protein IN878_RS23705 PF09278 MerR, DNA binding IN878_RS23705 PF00376 MerR family regulatory protein IN878_RS23710 PF02411 MerT mercuric transport protein IN878_RS23715 PF00403 Heavy-metal-associated domain IN878_RS23720 PF03203 MerC mercury resistance protein IN878_RS23725 PF00403 Heavy-metal-associated domain IN878_RS23725 PF07992 Pyridine nucleotide-disulphide oxidoreductase IN878_RS23725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IN878_RS23730 PF13411 MerR HTH family regulatory protein IN878_RS23735 PF05052 MerE protein IN878_RS23740 PF00990 Diguanylate cyclase, GGDEF domain IN878_RS23740 PF03707 Bacterial signalling protein N terminal repeat IN878_RS23740 PF00563 EAL domain IN878_RS23740 PF13188 PAS domain IN878_RS23750 PF13610 DDE domain IN878_RS23765 PF14492 Elongation Factor G, domain II IN878_RS23765 PF03764 Elongation factor G, domain IV IN878_RS23765 PF00679 Elongation factor G C-terminus IN878_RS23765 PF00009 Elongation factor Tu GTP binding domain IN878_RS23785 PF13495 Phage integrase, N-terminal SAM-like domain IN878_RS23785 PF00589 Phage integrase family IN878_RS23820 PF00892 EamA-like transporter family IN878_RS23825 PF07690 Major Facilitator Superfamily IN878_RS23830 PF00440 Bacterial regulatory proteins, tetR family IN878_RS23830 PF02909 Tetracyclin repressor-like, C-terminal domain IN878_RS23840 PF01526 Tn3 transposase DDE domain IN878_RS23840 PF13700 Domain of unknown function (DUF4158) IN878_RS23845 PF02796 Helix-turn-helix domain of resolvase IN878_RS23845 PF00239 Resolvase, N terminal domain IN878_RS23850 PF11809 Domain of unknown function (DUF3330) IN878_RS23850 PF00563 EAL domain IN878_RS23855 PF13495 Phage integrase, N-terminal SAM-like domain IN878_RS23855 PF00589 Phage integrase family IN878_RS23860 PF00186 Dihydrofolate reductase IN878_RS23870 PF13427 Domain of unknown function (DUF4111) IN878_RS23885 PF00809 Pterin binding enzyme IN878_RS23895 PF00106 short chain dehydrogenase IN878_RS23905 PF13610 DDE domain IN878_RS23950 PF00239 Resolvase, N terminal domain IN878_RS23950 PF02796 Helix-turn-helix domain of resolvase IN878_RS23955 PF13614 AAA domain IN878_RS23980 PF01051 Initiator Replication protein IN878_RS23990 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IN878_RS24005 PF13737 Transposase DDE domain IN878_RS24025 PF13610 DDE domain IN878_RS24030 PF02332 Methane/Phenol/Toluene Hydroxylase IN878_RS24040 PF00809 Pterin binding enzyme IN878_RS24055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IN878_RS24055 PF03466 LysR substrate binding domain IN878_RS24060 PF07690 Major Facilitator Superfamily IN878_RS24075 PF13610 DDE domain IN878_RS24085 PF01526 Tn3 transposase DDE domain IN878_RS24085 PF13700 Domain of unknown function (DUF4158) IN878_RS24090 PF00239 Resolvase, N terminal domain IN878_RS24090 PF02796 Helix-turn-helix domain of resolvase IN878_RS24095 PF13610 DDE domain IN878_RS24105 PF13610 DDE domain IN878_RS24115 PF01420 Type I restriction modification DNA specificity domain IN878_RS24120 PF12161 HsdM N-terminal domain IN878_RS24120 PF02384 N-6 DNA Methylase IN878_RS24125 PF07484 Phage Tail Collar Domain IN878_RS24125 PF03335 Phage tail fibre repeat IN878_RS24130 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IN878_RS24140 PF03335 Phage tail fibre repeat IN878_RS24140 PF08400 Prophage tail fibre N-terminal IN878_RS24140 PF07484 Phage Tail Collar Domain IN878_RS24140 PF03335 Phage tail fibre repeat IN878_RS24140 PF08400 Prophage tail fibre N-terminal IN878_RS24140 PF07484 Phage Tail Collar Domain IN878_RS24140 PF03335 Phage tail fibre repeat IN878_RS24140 PF08400 Prophage tail fibre N-terminal IN878_RS24140 PF07484 Phage Tail Collar Domain IN878_RS24185 PF17358 Family of unknown function (DUF5384) IN878_RS24190 PF05433 Glycine zipper 2TM domain IN878_RS24220 PF01848 Hok/gef family IN878_RS24250 PF08775 ParB family IN878_RS24250 PF02195 ParB-like nuclease domain IN878_RS24255 PF13614 AAA domain IN878_RS24255 PF18607 ParA helix turn helix domain IN878_RS24260 PF01051 Initiator Replication protein IN878_RS24285 PF04381 Putative exonuclease, RdgC IN878_RS24290 PF02086 D12 class N6 adenine-specific DNA methyltransferase IN878_RS24320 PF00772 DnaB-like helicase N terminal domain IN878_RS24320 PF03796 DnaB-like helicase C terminal domain IN878_RS24385 PF00149 Calcineurin-like phosphoesterase IN878_RS24405 PF18766 SWI2/SNF2 ATPase IN878_RS24405 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IN878_RS24405 PF12008 Type I restriction and modification enzyme - subunit R C terminal IN878_RS24410 PF01420 Type I restriction modification DNA specificity domain IN878_RS24415 PF02384 N-6 DNA Methylase IN878_RS24415 PF12161 HsdM N-terminal domain IN878_RS24510 PF12323 Helix-turn-helix domain IN878_RS24510 PF07282 Putative transposase DNA-binding domain IN878_RS24510 PF01385 Probable transposase IN878_RS24525 PF00436 Single-strand binding protein family IN878_RS24550 PF07731 Multicopper oxidase IN878_RS24550 PF07732 Multicopper oxidase IN878_RS24550 PF00394 Multicopper oxidase IN878_RS24600 PF02796 Helix-turn-helix domain of resolvase IN878_RS24600 PF00239 Resolvase, N terminal domain IN878_RS24610 PF05321 Haemolysin expression modulating protein IN878_RS24615 PF00816 H-NS histone family IN878_RS24620 PF10609 NUBPL iron-transfer P-loop NTPase IN878_RS24640 PF08019 Phosphoethanolamine transferase EptA/EptB IN878_RS24640 PF00884 Sulfatase IN878_RS24665 PF00226 DnaJ domain IN878_RS24665 PF01556 DnaJ C terminal domain IN878_RS24665 PF00684 DnaJ central domain IN878_RS24735 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IN878_RS24755 PF03524 Conjugal transfer protein IN878_RS24760 PF03743 Bacterial conjugation TrbI-like protein IN878_RS24765 PF00437 Type II/IV secretion system protein IN878_RS24795 PF00565 Staphylococcal nuclease homologue IN878_RS24835 PF05713 Bacterial mobilisation protein (MobC) IN878_RS24860 PF03797 Autotransporter beta-domain IN878_RS24860 PF13018 Extended Signal Peptide of Type V secretion system IN878_RS24860 PF02395 Immunoglobulin A1 protease IN878_RS24865 PF13676 TIR domain IN878_RS24885 PF13610 DDE domain IN878_RS24905 PF05717 IS66 Orf2 like protein IN878_RS24935 PF13953 PapC C-terminal domain IN878_RS24935 PF00577 Outer membrane usher protein IN878_RS24935 PF13954 PapC N-terminal domain IN878_RS24940 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IN878_RS24940 PF02753 Pili assembly chaperone PapD, C-terminal domain IN878_RS24945 PF06443 SEF14-like adhesin IN878_RS24975 PF00700 Bacterial flagellin C-terminal helical region IN878_RS24975 PF08884 Flagellin D3 domain IN878_RS24975 PF00669 Bacterial flagellin N-terminal helical region IN878_RS24980 PF03614 Repressor of phase-1 flagellin IN878_RS24995 PF12833 Helix-turn-helix domain IN878_RS25020 PF05321 Haemolysin expression modulating protein IN878_RS25055 PF01850 PIN domain IN878_RS25060 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IN878_RS25070 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH IN878_RS25095 PF05717 IS66 Orf2 like protein IN878_RS25125 PF02395 Immunoglobulin A1 protease IN878_RS25125 PF03797 Autotransporter beta-domain IN878_RS25145 PF00665 Integrase core domain IN878_RS25145 PF13936 Helix-turn-helix domain IN878_RS25160 PF13018 Extended Signal Peptide of Type V secretion system IN878_RS25160 PF02395 Immunoglobulin A1 protease IN878_RS25160 PF03797 Autotransporter beta-domain IN878_RS25170 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IN878_RS25180 PF02387 IncFII RepA protein family IN878_RS25185 PF08048 Tap RepA1 leader peptide IN878_RS25190 PF10723 Replication regulatory protein RepB IN878_RS25195 PF13005 zinc-finger binding domain of transposase IS66 IN878_RS25195 PF13817 IS66 C-terminal element IN878_RS25195 PF13007 Transposase C of IS166 homeodomain IN878_RS25195 PF03050 Transposase IS66 family IN878_RS25200 PF05717 IS66 Orf2 like protein IN878_RS25205 PF13276 HTH-like domain IN878_RS25205 PF01527 Transposase IN878_RS25205 PF00665 Integrase core domain IN878_RS25225 PF12602 Fertility inhibition protein N terminal IN878_RS25225 PF04352 ProQ/FINO family IN878_RS25230 PF00561 alpha/beta hydrolase fold IN878_RS25235 PF05857 TraX protein IN878_RS25240 PF07057 DNA helicase TraI IN878_RS25240 PF18272 single-stranded DNA binding TraI N-terminal subdomain IN878_RS25240 PF08751 TrwC relaxase IN878_RS25240 PF18340 DNA relaxase TraI 2B/2B-like domain IN878_RS25245 PF10412 Type IV secretion-system coupling protein DNA-binding domain IN878_RS25245 PF12615 F sex factor protein N terminal IN878_RS25250 PF05818 Enterobacterial TraT complement resistance protein IN878_RS25260 PF07916 TraG-like protein, N-terminal region IN878_RS25265 PF06122 Conjugative relaxosome accessory transposon protein IN878_RS25275 PF13728 F plasmid transfer operon protein IN878_RS25280 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) IN878_RS25290 PF13728 F plasmid transfer operon protein IN878_RS25295 PF11100 Conjugal transfer protein TrbE IN878_RS25300 PF06986 Type-1V conjugative transfer system mating pair stabilisation IN878_RS25305 PF09673 Type-F conjugative transfer system pilin assembly protein IN878_RS25310 PF06834 TraU protein IN878_RS25320 PF06586 TraK protein IN878_RS25325 PF05309 TraE protein IN878_RS25330 PF07178 TraL protein IN878_RS25335 PF05513 TraA IN878_RS25340 PF05509 TraY domain IN878_RS25345 PF00989 PAS fold IN878_RS25350 PF05261 TraM protein, DNA-binding IN878_RS25355 PF01464 Transglycosylase SLT domain IN878_RS25360 PF06067 Domain of unknown function (DUF932) IN878_RS25375 PF01848 Hok/gef family IN878_RS25380 PF06952 PsiA protein IN878_RS25385 PF06290 Plasmid SOS inhibition protein (PsiB) IN878_RS25390 PF02195 ParB-like nuclease domain IN878_RS25395 PF06006 Bacterial protein of unknown function (DUF905) IN878_RS25400 PF00436 Single-strand binding protein family IN878_RS25425 PF07128 Protein of unknown function (DUF1380) IN878_RS25430 PF03230 Antirestriction protein IN878_RS25440 PF07128 Protein of unknown function (DUF1380) IN878_RS25450 PF01555 DNA methylase IN878_RS25460 PF06406 StbA protein IN878_RS25465 PF10784 Plasmid stability protein IN878_RS25475 PF03515 Colicin-like bacteriocin tRNase domain IN878_RS25475 PF01024 Colicin pore forming domain IN878_RS25480 PF03857 Colicin immunity protein IN878_RS25485 PF14859 Colicin M IN878_RS25490 PF13995 YebF-like protein IN878_RS25515 PF05713 Bacterial mobilisation protein (MobC) IN878_RS25540 PF05713 Bacterial mobilisation protein (MobC) IN878_RS25570 PF01076 Plasmid recombination enzyme IN878_RS25580 PF01815 Rop protein