C3029_RS00015 SM01234 C3029_RS00015 C3029_RS00110 SM01061 CAT RNA binding domain C3029_RS00120 SM00382 ATPases associated with a variety of cellular activities C3029_RS00155 SM00382 ATPases associated with a variety of cellular activities C3029_RS00200 SM01228 C3029_RS00200 C3029_RS00210 SM00344 helix_turn_helix ASNC type C3029_RS00220 SM00327 von Willebrand factor (vWF) type A domain C3029_RS00225 SM00382 ATPases associated with a variety of cellular activities C3029_RS00255 SM00382 ATPases associated with a variety of cellular activities C3029_RS00275 SM00354 helix_turn _helix lactose operon repressor C3029_RS00285 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS00285 SM00895 C3029_RS00285 C3029_RS00330 SM00382 ATPases associated with a variety of cellular activities C3029_RS00395 SM00487 DEAD-like helicases superfamily C3029_RS00395 SM00490 helicase superfamily c-terminal domain C3029_RS00410 SM00357 Cold shock protein domain C3029_RS00410 SM00382 ATPases associated with a variety of cellular activities C3029_RS00410 SM00959 Rho termination factor, N-terminal domain C3029_RS00435 SM00984 UDP binding domain C3029_RS00540 SM01219 C3029_RS00540 C3029_RS00635 SM00341 Helicase and RNase D C-terminal C3029_RS00635 SM00487 DEAD-like helicases superfamily C3029_RS00635 SM00490 helicase superfamily c-terminal domain C3029_RS00635 SM00956 C3029_RS00635 C3029_RS00755 SM00346 helix_turn_helix isocitrate lyase regulation C3029_RS00800 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C3029_RS00900 SM00563 Phosphate acyltransferases C3029_RS00910 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C3029_RS00910 SM00474 3'-5' exonuclease C3029_RS00910 SM00475 5'-3' exonuclease C3029_RS00910 SM00482 DNA polymerase A domain C3029_RS00925 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS00935 SM00382 ATPases associated with a variety of cellular activities C3029_RS00935 SM00448 cheY-homologous receiver domain C3029_RS00940 SM00091 PAS domain C3029_RS00940 SM00387 Histidine kinase-like ATPases C3029_RS00940 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS00945 SM01230 C3029_RS00945 C3029_RS00960 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS00960 SM00866 C3029_RS00960 C3029_RS01005 SM01133 C3029_RS01005 C3029_RS01020 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS01020 SM01134 C3029_RS01020 C3029_RS01080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS01125 SM01007 Class II Aldolase and Adducin N-terminal domain C3029_RS01145 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS01150 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS01180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS01180 SM00387 Histidine kinase-like ATPases C3029_RS01180 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS01185 SM00448 cheY-homologous receiver domain C3029_RS01185 SM00862 Transcriptional regulatory protein, C terminal C3029_RS01275 SM00382 ATPases associated with a variety of cellular activities C3029_RS01275 SM01086 C-terminal, D2-small domain, of ClpB protein C3029_RS01290 SM00354 helix_turn _helix lactose operon repressor C3029_RS01295 SM00487 DEAD-like helicases superfamily C3029_RS01295 SM00490 helicase superfamily c-terminal domain C3029_RS01400 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS01420 SM00859 Semialdehyde dehydrogenase, NAD binding domain C3029_RS01540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C3029_RS01540 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C3029_RS01545 SM00649 Ribosomal protein L11/L12 C3029_RS01570 SM00663 RNA polymerase I subunit A N-terminus C3029_RS01580 SM00876 Biotin and Thiamin Synthesis associated domain C3029_RS01635 SM00411 bacterial (prokaryotic) histone like domain C3029_RS01650 SM00387 Histidine kinase-like ATPases C3029_RS01650 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS01655 SM00382 ATPases associated with a variety of cellular activities C3029_RS01655 SM00448 cheY-homologous receiver domain C3029_RS01660 SM01209 C3029_RS01660 C3029_RS01660 SM01210 C3029_RS01660 C3029_RS01665 SM00798 AICARFT/IMPCHase bienzyme C3029_RS01665 SM00851 MGS-like domain C3029_RS01725 SM00346 helix_turn_helix isocitrate lyase regulation C3029_RS01730 SM01018 B12 binding domain C3029_RS01745 SM00363 S4 RNA-binding domain C3029_RS01825 SM00382 ATPases associated with a variety of cellular activities C3029_RS01860 SM00563 Phosphate acyltransferases C3029_RS01910 SM00829 Enoylreductase C3029_RS01915 SM00382 ATPases associated with a variety of cellular activities C3029_RS01920 SM01005 Alanine racemase, C-terminal domain C3029_RS01965 SM00052 Putative diguanylate phosphodiesterase C3029_RS01970 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS01975 SM00422 helix_turn_helix, mercury resistance C3029_RS02040 SM00028 Tetratricopeptide repeats C3029_RS02050 SM00671 Sel1-like repeats. C3029_RS02060 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS02085 SM00849 Metallo-beta-lactamase superfamily C3029_RS02105 SM00382 ATPases associated with a variety of cellular activities C3029_RS02140 SM00072 Guanylate kinase homologues. C3029_RS02150 SM00382 ATPases associated with a variety of cellular activities C3029_RS02155 SM00382 ATPases associated with a variety of cellular activities C3029_RS02180 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS02180 SM00866 C3029_RS02180 C3029_RS02195 SM00382 ATPases associated with a variety of cellular activities C3029_RS02230 SM00387 Histidine kinase-like ATPases C3029_RS02230 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS02235 SM00448 cheY-homologous receiver domain C3029_RS02235 SM00862 Transcriptional regulatory protein, C terminal C3029_RS02250 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS02260 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS02300 SM00448 cheY-homologous receiver domain C3029_RS02355 SM00862 Transcriptional regulatory protein, C terminal C3029_RS02400 SM00883 Chaperonin 10 Kd subunit C3029_RS02425 SM00841 Elongation factor P, C-terminal C3029_RS02425 SM01185 C3029_RS02425 C3029_RS02500 SM00479 C3029_RS02500 C3029_RS02535 SM00646 C3029_RS02535 C3029_RS02540 SM00853 MutL C terminal dimerisation domain C3029_RS02540 SM01340 C3029_RS02540 C3029_RS02560 SM00244 prohibitin homologues C3029_RS02565 SM00244 prohibitin homologues C3029_RS02575 SM00788 Adenylosuccinate synthetase C3029_RS02585 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS02585 SM00357 Cold shock protein domain C3029_RS02585 SM00955 C3029_RS02585 C3029_RS02590 SM00967 RNA 2'-O ribose methyltransferase substrate binding C3029_RS02645 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS02645 SM01134 C3029_RS02645 C3029_RS02670 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C3029_RS02680 SM01007 Class II Aldolase and Adducin N-terminal domain C3029_RS02725 SM00882 Coenzyme A transferase C3029_RS02805 SM01091 Transporter associated domain C3029_RS02845 SM00382 ATPases associated with a variety of cellular activities C3029_RS02895 SM00642 Alpha-amylase domain C3029_RS02905 SM00354 helix_turn _helix lactose operon repressor C3029_RS02910 SM00831 Cation transporter/ATPase, N-terminus C3029_RS02945 SM00822 C3029_RS02945 C3029_RS03015 SM00354 helix_turn _helix lactose operon repressor C3029_RS03040 SM00829 Enoylreductase C3029_RS03140 SM00382 ATPases associated with a variety of cellular activities C3029_RS03160 SM00965 Secretin and TonB N terminus short domain C3029_RS03245 SM00271 DnaJ molecular chaperone homology domain C3029_RS03270 SM00852 Probable molybdopterin binding domain C3029_RS03330 SM00448 cheY-homologous receiver domain C3029_RS03330 SM00862 Transcriptional regulatory protein, C terminal C3029_RS03340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS03340 SM00387 Histidine kinase-like ATPases C3029_RS03340 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS03345 SM00448 cheY-homologous receiver domain C3029_RS03345 SM00862 Transcriptional regulatory protein, C terminal C3029_RS03355 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS03355 SM00871 Bacterial transcription activator, effector binding domain C3029_RS03360 SM00855 Phosphoglycerate mutase family C3029_RS03380 SM00382 ATPases associated with a variety of cellular activities C3029_RS03390 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS03395 SM00382 ATPases associated with a variety of cellular activities C3029_RS03430 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C3029_RS03435 SM01133 C3029_RS03435 C3029_RS03470 SM00749 bacterial OsmY and nodulation domain C3029_RS03525 SM00421 helix_turn_helix, Lux Regulon C3029_RS03530 SM00421 helix_turn_helix, Lux Regulon C3029_RS03550 SM00382 ATPases associated with a variety of cellular activities C3029_RS03575 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS03665 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS03665 SM00895 C3029_RS03665 C3029_RS03840 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS03840 SM01134 C3029_RS03840 C3029_RS03865 SM00904 Riboflavin kinase C3029_RS03910 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C3029_RS03915 SM00851 MGS-like domain C3029_RS03915 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3029_RS03960 SM00893 Electron transfer flavoprotein domain C3029_RS03965 SM00893 Electron transfer flavoprotein domain C3029_RS04010 SM00650 Ribosomal RNA adenine dimethylases C3029_RS04030 SM00271 DnaJ molecular chaperone homology domain C3029_RS04040 SM00487 DEAD-like helicases superfamily C3029_RS04040 SM00490 helicase superfamily c-terminal domain C3029_RS04045 SM00486 DNA polymerase type-B family C3029_RS04050 SM01007 Class II Aldolase and Adducin N-terminal domain C3029_RS04065 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS04075 SM00382 ATPases associated with a variety of cellular activities C3029_RS04115 SM01329 C3029_RS04115 C3029_RS04120 SM00917 LeuA allosteric (dimerisation) domain C3029_RS04150 SM00354 helix_turn _helix lactose operon repressor C3029_RS04220 SM00842 Cell division protein FtsA C3029_RS04225 SM00864 Tubulin/FtsZ family, GTPase domain C3029_RS04225 SM00865 Tubulin/FtsZ family, C-terminal domain C3029_RS04240 SM00957 SecA DEAD-like domain C3029_RS04240 SM00958 SecA preprotein cross-linking domain C3029_RS04270 SM01240 C3029_RS04270 C3029_RS04300 SM00644 C3029_RS04300 C3029_RS04315 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS04315 SM00895 C3029_RS04315 C3029_RS04370 SM00564 beta-propeller repeat C3029_RS04380 SM00947 Carbonic anhydrase C3029_RS04385 SM00382 ATPases associated with a variety of cellular activities C3029_RS04490 SM00487 DEAD-like helicases superfamily C3029_RS04490 SM00490 helicase superfamily c-terminal domain C3029_RS04490 SM00847 Helicase associated domain (HA2) Add an annotation C3029_RS04530 SM00382 ATPases associated with a variety of cellular activities C3029_RS04575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C3029_RS04580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3029_RS04605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C3029_RS04650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3029_RS04660 SM00935 Outer membrane protein (OmpH-like) C3029_RS04690 SM00481 DNA polymerase alpha chain like domain C3029_RS04710 SM00977 TilS substrate C-terminal domain C3029_RS04725 SM01322 C3029_RS04725 C3029_RS04770 SM00382 ATPases associated with a variety of cellular activities C3029_RS04770 SM00930 C3029_RS04770 C3029_RS04830 SM00257 Lysin motif C3029_RS04835 SM00849 Metallo-beta-lactamase superfamily C3029_RS04850 SM00479 C3029_RS04850 C3029_RS04920 SM01321 C3029_RS04920 C3029_RS04995 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C3029_RS05020 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3029_RS05025 SM01092 CO dehydrogenase flavoprotein C-terminal domain C3029_RS05075 SM00421 helix_turn_helix, Lux Regulon C3029_RS05105 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS05105 SM00871 Bacterial transcription activator, effector binding domain C3029_RS05125 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS05175 SM00052 Putative diguanylate phosphodiesterase C3029_RS05175 SM00421 helix_turn_helix, Lux Regulon C3029_RS05190 SM00248 ankyrin repeats C3029_RS05225 SM00829 Enoylreductase C3029_RS05250 SM00382 ATPases associated with a variety of cellular activities C3029_RS05290 SM00947 Carbonic anhydrase C3029_RS05295 SM01116 C3029_RS05295 C3029_RS05305 SM01266 C3029_RS05305 C3029_RS05315 SM01038 Beta galactosidase small chain C3029_RS05320 SM01311 C3029_RS05320 C3029_RS05335 SM00346 helix_turn_helix isocitrate lyase regulation C3029_RS05360 SM00859 Semialdehyde dehydrogenase, NAD binding domain C3029_RS05385 SM00829 Enoylreductase C3029_RS05405 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS05410 SM00382 ATPases associated with a variety of cellular activities C3029_RS05425 SM01004 Delta-aminolevulinic acid dehydratase C3029_RS05430 SM00869 Autotransporter beta-domain C3029_RS05485 SM00098 Alkaline phosphatase homologues C3029_RS05495 SM00267 diguanylate cyclase C3029_RS05570 SM00448 cheY-homologous receiver domain C3029_RS05570 SM00862 Transcriptional regulatory protein, C terminal C3029_RS05575 SM00091 PAS domain C3029_RS05575 SM00387 Histidine kinase-like ATPases C3029_RS05575 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS05590 SM00642 Alpha-amylase domain C3029_RS05610 SM01323 C3029_RS05610 C3029_RS05625 SM00507 HNH nucleases C3029_RS05680 SM00861 Transketolase, pyrimidine binding domain C3029_RS05695 SM00981 C3029_RS05695 C3029_RS05720 SM00671 Sel1-like repeats. C3029_RS05790 SM00382 ATPases associated with a variety of cellular activities C3029_RS05790 SM00994 ClpX C4-type zinc finger C3029_RS05790 SM01086 C-terminal, D2-small domain, of ClpB protein C3029_RS05800 SM00382 ATPases associated with a variety of cellular activities C3029_RS05800 SM00464 Found in ATP-dependent protease La (LON) C3029_RS05805 SM00411 bacterial (prokaryotic) histone like domain C3029_RS05815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C3029_RS05840 SM00344 helix_turn_helix ASNC type C3029_RS05845 SM00382 ATPases associated with a variety of cellular activities C3029_RS05850 SM00382 ATPases associated with a variety of cellular activities C3029_RS05855 SM00938 Nitrogen regulatory protein P-II C3029_RS05890 SM00052 Putative diguanylate phosphodiesterase C3029_RS05900 SM01266 C3029_RS05900 C3029_RS05960 SM00382 ATPases associated with a variety of cellular activities C3029_RS05970 SM00493 C3029_RS05970 C3029_RS05975 SM00387 Histidine kinase-like ATPases C3029_RS06025 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS06045 SM00422 helix_turn_helix, mercury resistance C3029_RS06055 SM00244 prohibitin homologues C3029_RS06060 SM00382 ATPases associated with a variety of cellular activities C3029_RS06075 SM00822 C3029_RS06075 C3029_RS06085 SM00382 ATPases associated with a variety of cellular activities C3029_RS06120 SM00450 Rhodanese Homology Domain C3029_RS06135 SM00346 helix_turn_helix isocitrate lyase regulation C3029_RS06215 SM01001 AIR carboxylase C3029_RS06230 SM00840 C3029_RS06230 C3029_RS06275 SM00421 helix_turn_helix, Lux Regulon C3029_RS06275 SM00448 cheY-homologous receiver domain C3029_RS06330 SM00857 Resolvase, N terminal domain C3029_RS06340 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS06435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS06435 SM00387 Histidine kinase-like ATPases C3029_RS06435 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS06440 SM00448 cheY-homologous receiver domain C3029_RS06440 SM00862 Transcriptional regulatory protein, C terminal C3029_RS06540 SM00923 MbtH-like protein C3029_RS06545 SM00823 Phosphopantetheine attachment site C3029_RS06545 SM00824 Thioesterase C3029_RS06555 SM00382 ATPases associated with a variety of cellular activities C3029_RS06595 SM00822 C3029_RS06595 C3029_RS06625 SM00470 ParB-like nuclease domain C3029_RS06710 SM00764 Citrate lyase ligase C-terminal domain C3029_RS06720 SM00091 PAS domain C3029_RS06720 SM00387 Histidine kinase-like ATPases C3029_RS06725 SM00448 cheY-homologous receiver domain C3029_RS06740 SM00357 Cold shock protein domain C3029_RS06760 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS06785 SM00936 Penicillin-binding protein 5, C-terminal domain C3029_RS06815 SM00855 Phosphoglycerate mutase family C3029_RS06900 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS06915 SM00116 Domain in cystathionine beta-synthase and other proteins. C3029_RS06915 SM01091 Transporter associated domain C3029_RS06930 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS07090 SM00448 cheY-homologous receiver domain C3029_RS07090 SM00862 Transcriptional regulatory protein, C terminal C3029_RS07095 SM00387 Histidine kinase-like ATPases C3029_RS07095 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS07190 SM00796 Allophanate hydrolase subunit 1 C3029_RS07195 SM00797 Allophanate hydrolase subunit 2 C3029_RS07205 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C3029_RS07205 SM01232 C3029_RS07205 C3029_RS07270 SM00861 Transketolase, pyrimidine binding domain C3029_RS07285 SM00881 CoA binding domain C3029_RS07290 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS07290 SM00866 C3029_RS07290 C3029_RS07300 SM00872 Alpha mannosidase, middle domain C3029_RS07445 SM00855 Phosphoglycerate mutase family C3029_RS07560 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS07720 SM00635 Bacterial Ig-like domain 2 C3029_RS07750 SM00232 JAB/MPN domain C3029_RS07760 SM00060 Fibronectin type 3 domain C3029_RS07800 SM00354 helix_turn _helix lactose operon repressor C3029_RS07890 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS08040 SM00635 Bacterial Ig-like domain 2 C3029_RS08070 SM00232 JAB/MPN domain C3029_RS08080 SM00060 Fibronectin type 3 domain C3029_RS08120 SM00354 helix_turn _helix lactose operon repressor C3029_RS08140 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS08140 SM00876 Biotin and Thiamin Synthesis associated domain C3029_RS08160 SM00487 DEAD-like helicases superfamily C3029_RS08160 SM00490 helicase superfamily c-terminal domain C3029_RS08170 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS08175 SM00852 Probable molybdopterin binding domain C3029_RS08210 SM00155 Phospholipase D. Active site motifs. C3029_RS08235 SM00382 ATPases associated with a variety of cellular activities C3029_RS08250 SM00487 DEAD-like helicases superfamily C3029_RS08250 SM00490 helicase superfamily c-terminal domain C3029_RS08260 SM00487 DEAD-like helicases superfamily C3029_RS08260 SM00488 C3029_RS08260 C3029_RS08260 SM00491 C3029_RS08260 C3029_RS08285 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C3029_RS08310 SM00382 ATPases associated with a variety of cellular activities C3029_RS08320 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS08320 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C3029_RS08355 SM00529 Helix-turn-helix diphteria tox regulatory element C3029_RS08370 SM00382 ATPases associated with a variety of cellular activities C3029_RS08405 SM00852 Probable molybdopterin binding domain C3029_RS08415 SM00382 ATPases associated with a variety of cellular activities C3029_RS08440 SM00267 diguanylate cyclase C3029_RS08445 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS08465 SM00936 Penicillin-binding protein 5, C-terminal domain C3029_RS08470 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS08470 SM01134 C3029_RS08470 C3029_RS08475 SM00014 Acid phosphatase homologues C3029_RS08630 SM00857 Resolvase, N terminal domain C3029_RS08685 SM00382 ATPases associated with a variety of cellular activities C3029_RS08710 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS08710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C3029_RS08725 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS08725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C3029_RS08730 SM00382 ATPases associated with a variety of cellular activities C3029_RS08745 SM00644 C3029_RS08745 C3029_RS08810 SM00382 ATPases associated with a variety of cellular activities C3029_RS08815 SM00357 Cold shock protein domain C3029_RS08825 SM00382 ATPases associated with a variety of cellular activities C3029_RS08825 SM01086 C-terminal, D2-small domain, of ClpB protein C3029_RS08835 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS08845 SM00382 ATPases associated with a variety of cellular activities C3029_RS08850 SM00382 ATPases associated with a variety of cellular activities C3029_RS08855 SM00344 helix_turn_helix ASNC type C3029_RS08860 SM00843 C3029_RS08860 C3029_RS08870 SM00382 ATPases associated with a variety of cellular activities C3029_RS08880 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS08965 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS08970 SM00411 bacterial (prokaryotic) histone like domain C3029_RS08975 SM00849 Metallo-beta-lactamase superfamily C3029_RS08980 SM00382 ATPases associated with a variety of cellular activities C3029_RS09045 SM00849 Metallo-beta-lactamase superfamily C3029_RS09080 SM00382 ATPases associated with a variety of cellular activities C3029_RS09095 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS09155 SM00981 C3029_RS09155 C3029_RS09160 SM00382 ATPases associated with a variety of cellular activities C3029_RS09235 SM00851 MGS-like domain C3029_RS09250 SM00881 CoA binding domain C3029_RS09255 SM00992 Hemimethylated DNA-binding protein YccV like C3029_RS09260 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C3029_RS09340 SM00226 Low molecular weight phosphatase family C3029_RS09380 SM00357 Cold shock protein domain C3029_RS09385 SM00357 Cold shock protein domain C3029_RS09405 SM00073 Histidine Phosphotransfer domain C3029_RS09405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS09405 SM00387 Histidine kinase-like ATPases C3029_RS09405 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS09405 SM00448 cheY-homologous receiver domain C3029_RS09415 SM00448 cheY-homologous receiver domain C3029_RS09415 SM00862 Transcriptional regulatory protein, C terminal C3029_RS09440 SM00271 DnaJ molecular chaperone homology domain C3029_RS09480 SM00903 Flavin reductase like domain C3029_RS09575 SM00028 Tetratricopeptide repeats C3029_RS09580 SM00267 diguanylate cyclase C3029_RS09610 SM00481 DNA polymerase alpha chain like domain C3029_RS09640 SM00421 helix_turn_helix, Lux Regulon C3029_RS09670 SM00506 Appr-1"-p processing enzyme C3029_RS09675 SM00155 Phospholipase D. Active site motifs. C3029_RS09730 SM00450 Rhodanese Homology Domain C3029_RS09735 SM00867 YceI-like domain C3029_RS09815 SM00858 C3029_RS09815 C3029_RS09860 SM00047 Lysozyme subfamily 2 C3029_RS09875 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS09885 SM00363 S4 RNA-binding domain C3029_RS09915 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C3029_RS09920 SM00822 C3029_RS09920 C3029_RS09930 SM00825 Beta-ketoacyl synthase C3029_RS10020 SM00257 Lysin motif C3029_RS10025 SM00487 DEAD-like helicases superfamily C3029_RS10025 SM00490 helicase superfamily c-terminal domain C3029_RS10025 SM00982 C3029_RS10025 C3029_RS10025 SM01058 CarD-like/TRCF domain C3029_RS10040 SM00382 ATPases associated with a variety of cellular activities C3029_RS10095 SM00382 ATPases associated with a variety of cellular activities C3029_RS10110 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C3029_RS10115 SM00387 Histidine kinase-like ATPases C3029_RS10120 SM00448 cheY-homologous receiver domain C3029_RS10120 SM00862 Transcriptional regulatory protein, C terminal C3029_RS10150 SM01329 C3029_RS10150 C3029_RS10180 SM00422 helix_turn_helix, mercury resistance C3029_RS10185 SM00052 Putative diguanylate phosphodiesterase C3029_RS10185 SM01034 Sensors of blue-light using FAD C3029_RS10210 SM00052 Putative diguanylate phosphodiesterase C3029_RS10320 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS10335 SM01005 Alanine racemase, C-terminal domain C3029_RS10340 SM01091 Transporter associated domain C3029_RS10380 SM01120 C3029_RS10380 C3029_RS10390 SM00091 PAS domain C3029_RS10390 SM00382 ATPases associated with a variety of cellular activities C3029_RS10395 SM00869 Autotransporter beta-domain C3029_RS10425 SM01400 C3029_RS10425 C3029_RS10445 SM00937 C3029_RS10445 C3029_RS10510 SM00421 helix_turn_helix, Lux Regulon C3029_RS10510 SM00448 cheY-homologous receiver domain C3029_RS10515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS10515 SM00387 Histidine kinase-like ATPases C3029_RS10530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS10585 SM00448 cheY-homologous receiver domain C3029_RS10595 SM00528 Domain in histone-like proteins of HNS family C3029_RS10630 SM00382 ATPases associated with a variety of cellular activities C3029_RS10635 SM00382 ATPases associated with a variety of cellular activities C3029_RS10645 SM00155 Phospholipase D. Active site motifs. C3029_RS10730 SM00481 DNA polymerase alpha chain like domain C3029_RS10755 SM00363 S4 RNA-binding domain C3029_RS10765 SM00822 C3029_RS10765 C3029_RS10790 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C3029_RS10790 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C3029_RS10790 SM00493 C3029_RS10790 C3029_RS10825 SM00014 Acid phosphatase homologues C3029_RS10835 SM00028 Tetratricopeptide repeats C3029_RS10840 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C3029_RS10855 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS10855 SM01134 C3029_RS10855 C3029_RS10865 SM00052 Putative diguanylate phosphodiesterase C3029_RS10865 SM00091 PAS domain C3029_RS10865 SM00267 diguanylate cyclase C3029_RS10875 SM00357 Cold shock protein domain C3029_RS10875 SM00955 C3029_RS10875 C3029_RS10895 SM00382 ATPases associated with a variety of cellular activities C3029_RS10900 SM00382 ATPases associated with a variety of cellular activities C3029_RS10935 SM01230 C3029_RS10935 C3029_RS10945 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS10965 SM00382 ATPases associated with a variety of cellular activities C3029_RS10990 SM00450 Rhodanese Homology Domain C3029_RS10995 SM00642 Alpha-amylase domain C3029_RS11040 SM00382 ATPases associated with a variety of cellular activities C3029_RS11050 SM00354 helix_turn _helix lactose operon repressor C3029_RS11065 SM00091 PAS domain C3029_RS11065 SM00382 ATPases associated with a variety of cellular activities C3029_RS11075 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3029_RS11165 SM00463 Small MutS-related domain C3029_RS11170 SM00091 PAS domain C3029_RS11170 SM00267 diguanylate cyclase C3029_RS11185 SM00487 DEAD-like helicases superfamily C3029_RS11185 SM00490 helicase superfamily c-terminal domain C3029_RS11280 SM00470 ParB-like nuclease domain C3029_RS11305 SM00857 Resolvase, N terminal domain C3029_RS11325 SM00890 Domain of unknown function C3029_RS11360 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS11410 SM00195 Dual specificity phosphatase, catalytic domain C3029_RS11410 SM00404 Protein tyrosine phosphatase, catalytic domain motif C3029_RS11420 SM00382 ATPases associated with a variety of cellular activities C3029_RS11420 SM00487 DEAD-like helicases superfamily C3029_RS11420 SM00490 helicase superfamily c-terminal domain C3029_RS11420 SM00847 Helicase associated domain (HA2) Add an annotation C3029_RS11435 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3029_RS11460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C3029_RS11460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS11460 SM00319 Homologues of the ligand binding domain of Tar C3029_RS11470 SM01150 C3029_RS11470 C3029_RS11520 SM01321 C3029_RS11520 C3029_RS11535 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS11555 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS11560 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS11570 SM00382 ATPases associated with a variety of cellular activities C3029_RS11615 SM00829 Enoylreductase C3029_RS11620 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS11620 SM00895 C3029_RS11620 C3029_RS11685 SM00903 Flavin reductase like domain C3029_RS11715 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS11740 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS11760 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS11765 SM00829 Enoylreductase C3029_RS11770 SM00919 Malic enzyme, NAD binding domain C3029_RS11770 SM01274 C3029_RS11770 C3029_RS11790 SM00382 ATPases associated with a variety of cellular activities C3029_RS11795 SM00382 ATPases associated with a variety of cellular activities C3029_RS11820 SM00052 Putative diguanylate phosphodiesterase C3029_RS11820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C3029_RS11820 SM00091 PAS domain C3029_RS11820 SM00267 diguanylate cyclase C3029_RS11825 SM00267 diguanylate cyclase C3029_RS11860 SM00382 ATPases associated with a variety of cellular activities C3029_RS11875 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS11935 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS11940 SM00869 Autotransporter beta-domain C3029_RS11955 SM01133 C3029_RS11955 C3029_RS11980 SM00267 diguanylate cyclase C3029_RS12020 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS12030 SM00347 helix_turn_helix multiple antibiotic resistance protein C3029_RS12035 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS12060 SM00267 diguanylate cyclase C3029_RS12085 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS12085 SM00895 C3029_RS12085 C3029_RS12115 SM00857 Resolvase, N terminal domain C3029_RS12160 SM00507 HNH nucleases C3029_RS12200 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS12250 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3029_RS12280 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS12285 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS12365 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C3029_RS12365 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C3029_RS12390 SM00448 cheY-homologous receiver domain C3029_RS12390 SM00862 Transcriptional regulatory protein, C terminal C3029_RS12395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS12395 SM00387 Histidine kinase-like ATPases C3029_RS12395 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS12450 SM00354 helix_turn _helix lactose operon repressor C3029_RS12510 SM00900 C3029_RS12510 C3029_RS12520 SM00478 endonuclease III C3029_RS12520 SM00525 C3029_RS12520 C3029_RS12545 SM00363 S4 RNA-binding domain C3029_RS12570 SM00347 helix_turn_helix multiple antibiotic resistance protein C3029_RS12620 SM00479 C3029_RS12620 C3029_RS12625 SM00382 ATPases associated with a variety of cellular activities C3029_RS12625 SM00487 DEAD-like helicases superfamily C3029_RS12625 SM00490 helicase superfamily c-terminal domain C3029_RS12655 SM00354 helix_turn _helix lactose operon repressor C3029_RS12730 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain C3029_RS12755 SM00257 Lysin motif C3029_RS12775 SM00382 ATPases associated with a variety of cellular activities C3029_RS12840 SM00882 Coenzyme A transferase C3029_RS12850 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS12860 SM00893 Electron transfer flavoprotein domain C3029_RS12865 SM00893 Electron transfer flavoprotein domain C3029_RS12925 SM00382 ATPases associated with a variety of cellular activities C3029_RS12940 SM00411 bacterial (prokaryotic) histone like domain C3029_RS12945 SM00873 B3/4 domain C3029_RS12945 SM00874 tRNA synthetase B5 domain C3029_RS12945 SM00896 Ferredoxin-fold anticodon binding domain C3029_RS12975 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C3029_RS13040 SM01060 C3029_RS13040 C3029_RS13050 SM01060 C3029_RS13050 C3029_RS13065 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS13100 SM00465 GIY-YIG type nucleases (URI domain) C3029_RS13175 SM00382 ATPases associated with a variety of cellular activities C3029_RS13180 SM00450 Rhodanese Homology Domain C3029_RS13200 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3029_RS13210 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C3029_RS13210 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C3029_RS13210 SM00493 C3029_RS13210 C3029_RS13240 SM00870 C3029_RS13240 C3029_RS13255 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS13255 SM01134 C3029_RS13255 C3029_RS13275 SM00829 Enoylreductase C3029_RS13300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3029_RS13320 SM00763 PrkA AAA domain C3029_RS13330 SM00267 diguanylate cyclase C3029_RS13335 SM00267 diguanylate cyclase C3029_RS13355 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS13375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3029_RS13375 SM00267 diguanylate cyclase C3029_RS13420 SM01329 C3029_RS13420 C3029_RS13440 SM00341 Helicase and RNase D C-terminal C3029_RS13440 SM00474 3'-5' exonuclease C3029_RS13460 SM00487 DEAD-like helicases superfamily C3029_RS13460 SM00491 C3029_RS13460 C3029_RS13500 SM00052 Putative diguanylate phosphodiesterase C3029_RS13505 SM01091 Transporter associated domain C3029_RS13550 SM00357 Cold shock protein domain C3029_RS13580 SM00346 helix_turn_helix isocitrate lyase regulation C3029_RS13595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3029_RS13595 SM00245 tail specific protease C3029_RS13600 SM00945 ProQ/FINO family C3029_RS13605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3029_RS13670 SM00479 C3029_RS13670 C3029_RS13740 SM00257 Lysin motif C3029_RS13750 SM00382 ATPases associated with a variety of cellular activities C3029_RS13760 SM00382 ATPases associated with a variety of cellular activities C3029_RS13765 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C3029_RS13840 SM00836 DALR anticodon binding domain C3029_RS13840 SM01016 Arginyl tRNA synthetase N terminal dom C3029_RS13870 SM00448 cheY-homologous receiver domain C3029_RS13875 SM00448 cheY-homologous receiver domain C3029_RS13880 SM00138 Methyltransferase, chemotaxis proteins C3029_RS13885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C3029_RS13885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS13885 SM00319 Homologues of the ligand binding domain of Tar C3029_RS13890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C3029_RS13890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS13890 SM00319 Homologues of the ligand binding domain of Tar C3029_RS13895 SM00260 Two component signalling adaptor domain C3029_RS13900 SM00073 Histidine Phosphotransfer domain C3029_RS13900 SM00260 Two component signalling adaptor domain C3029_RS13900 SM00387 Histidine kinase-like ATPases C3029_RS13900 SM01231 C3029_RS13900 C3029_RS13945 SM00382 ATPases associated with a variety of cellular activities C3029_RS14015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C3029_RS14015 SM00465 GIY-YIG type nucleases (URI domain) C3029_RS14020 SM00421 helix_turn_helix, Lux Regulon C3029_RS14020 SM00448 cheY-homologous receiver domain C3029_RS14035 SM00387 Histidine kinase-like ATPases C3029_RS14035 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS14040 SM00448 cheY-homologous receiver domain C3029_RS14040 SM00862 Transcriptional regulatory protein, C terminal C3029_RS14045 SM00095 Transthyretin C3029_RS14090 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C3029_RS14090 SM00634 Bacterial Ig-like domain (group 1) C3029_RS14210 SM00871 Bacterial transcription activator, effector binding domain C3029_RS14215 SM00936 Penicillin-binding protein 5, C-terminal domain C3029_RS14220 SM00479 C3029_RS14220 C3029_RS14295 SM00984 UDP binding domain C3029_RS14300 SM01350 C3029_RS14300 C3029_RS14475 SM00226 Low molecular weight phosphatase family C3029_RS14485 SM01091 Transporter associated domain C3029_RS14505 SM00052 Putative diguanylate phosphodiesterase C3029_RS14505 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C3029_RS14505 SM00091 PAS domain C3029_RS14505 SM00267 diguanylate cyclase C3029_RS14510 SM00478 endonuclease III C3029_RS14510 SM01009 AlkA N-terminal domain C3029_RS14530 SM00327 von Willebrand factor (vWF) type A domain C3029_RS14555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS14555 SM00387 Histidine kinase-like ATPases C3029_RS14555 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS14560 SM00448 cheY-homologous receiver domain C3029_RS14560 SM00862 Transcriptional regulatory protein, C terminal C3029_RS14585 SM00046 Diacylglycerol kinase catalytic domain (presumed) C3029_RS14590 SM01134 C3029_RS14590 C3029_RS14600 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS14605 SM00829 Enoylreductase C3029_RS14640 SM01133 C3029_RS14640 C3029_RS14660 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS14660 SM00866 C3029_RS14660 C3029_RS14665 SM00641 Glycosyl hydrolases family 25 C3029_RS14750 SM00773 Proposed nucleic acid binding domain C3029_RS14765 SM00382 ATPases associated with a variety of cellular activities C3029_RS14775 SM00327 von Willebrand factor (vWF) type A domain C3029_RS14795 SM00448 cheY-homologous receiver domain C3029_RS14795 SM00850 LytTr DNA-binding domain C3029_RS14800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3029_RS14805 SM00422 helix_turn_helix, mercury resistance C3029_RS14820 SM00382 ATPases associated with a variety of cellular activities C3029_RS14835 SM01217 C3029_RS14835 C3029_RS14920 SM00382 ATPases associated with a variety of cellular activities C3029_RS14930 SM00354 helix_turn _helix lactose operon repressor C3029_RS14980 SM00518 AP endonuclease family 2 C3029_RS15000 SM00100 Cyclic nucleotide-monophosphate binding domain C3029_RS15045 SM00841 Elongation factor P, C-terminal C3029_RS15045 SM01185 C3029_RS15045 C3029_RS15055 SM00833 Cobalamin synthesis protein cobW C-terminal domain C3029_RS15060 SM00014 Acid phosphatase homologues C3029_RS15070 SM00052 Putative diguanylate phosphodiesterase C3029_RS15090 SM00382 ATPases associated with a variety of cellular activities C3029_RS15105 SM00363 S4 RNA-binding domain C3029_RS15110 SM00487 DEAD-like helicases superfamily C3029_RS15110 SM00490 helicase superfamily c-terminal domain C3029_RS15140 SM00869 Autotransporter beta-domain C3029_RS15150 SM00421 helix_turn_helix, Lux Regulon C3029_RS15150 SM00448 cheY-homologous receiver domain C3029_RS15190 SM00382 ATPases associated with a variety of cellular activities C3029_RS15215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS15245 SM00382 ATPases associated with a variety of cellular activities C3029_RS15255 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS15275 SM00387 Histidine kinase-like ATPases C3029_RS15275 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS15275 SM00448 cheY-homologous receiver domain C3029_RS15280 SM00091 PAS domain C3029_RS15280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS15280 SM00387 Histidine kinase-like ATPases C3029_RS15280 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS15285 SM00382 ATPases associated with a variety of cellular activities C3029_RS15285 SM00448 cheY-homologous receiver domain C3029_RS15290 SM00882 Coenzyme A transferase C3029_RS15295 SM00882 Coenzyme A transferase C3029_RS15320 SM01359 C3029_RS15320 C3029_RS15320 SM01360 C3029_RS15320 C3029_RS15335 SM00434 DNA Topoisomerase IV C3029_RS15345 SM00869 Autotransporter beta-domain C3029_RS15420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3029_RS15425 SM00346 helix_turn_helix isocitrate lyase regulation C3029_RS15430 SM00852 Probable molybdopterin binding domain C3029_RS15495 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3029_RS15530 SM00849 Metallo-beta-lactamase superfamily C3029_RS15595 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3029_RS15595 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3029_RS15600 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C3029_RS15635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C3029_RS15700 SM00905 Dihydroneopterin aldolase C3029_RS15715 SM00382 ATPases associated with a variety of cellular activities C3029_RS15730 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS15735 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS15780 SM00859 Semialdehyde dehydrogenase, NAD binding domain C3029_RS15800 SM00825 Beta-ketoacyl synthase C3029_RS15840 SM00463 Small MutS-related domain C3029_RS15960 SM00421 helix_turn_helix, Lux Regulon C3029_RS15960 SM00448 cheY-homologous receiver domain C3029_RS15965 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS15965 SM00073 Histidine Phosphotransfer domain C3029_RS15965 SM00387 Histidine kinase-like ATPases C3029_RS15965 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS15965 SM00448 cheY-homologous receiver domain C3029_RS16020 SM00387 Histidine kinase-like ATPases C3029_RS16025 SM00448 cheY-homologous receiver domain C3029_RS16025 SM00850 LytTr DNA-binding domain C3029_RS16030 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS16090 SM00052 Putative diguanylate phosphodiesterase C3029_RS16090 SM00267 diguanylate cyclase C3029_RS16160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C3029_RS16160 SM00292 breast cancer carboxy-terminal domain C3029_RS16160 SM00532 Ligase N family C3029_RS16165 SM00771 ZipA, C-terminal domain (FtsZ-binding) C3029_RS16205 SM00773 Proposed nucleic acid binding domain C3029_RS16215 SM00382 ATPases associated with a variety of cellular activities C3029_RS16235 SM00822 C3029_RS16235 C3029_RS16280 SM00646 C3029_RS16280 C3029_RS16290 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS16295 SM00877 C3029_RS16295 C3029_RS16300 SM00877 C3029_RS16300 C3029_RS16345 SM00877 C3029_RS16345 C3029_RS16370 SM00877 C3029_RS16370 C3029_RS16375 SM00919 Malic enzyme, NAD binding domain C3029_RS16375 SM01274 C3029_RS16375 C3029_RS16385 SM00861 Transketolase, pyrimidine binding domain C3029_RS16405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS16405 SM00387 Histidine kinase-like ATPases C3029_RS16465 SM01130 C3029_RS16465 C3029_RS16530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3029_RS16530 SM00382 ATPases associated with a variety of cellular activities C3029_RS16590 SM00052 Putative diguanylate phosphodiesterase C3029_RS16590 SM00267 diguanylate cyclase C3029_RS16620 SM00116 Domain in cystathionine beta-synthase and other proteins. C3029_RS16620 SM01240 C3029_RS16620 C3029_RS16640 SM00564 beta-propeller repeat C3029_RS16660 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS16670 SM00562 C3029_RS16670 C3029_RS16680 SM01359 C3029_RS16680 C3029_RS16680 SM01360 C3029_RS16680 C3029_RS16685 SM00450 Rhodanese Homology Domain C3029_RS16725 SM00271 DnaJ molecular chaperone homology domain C3029_RS16815 SM00829 Enoylreductase C3029_RS16825 SM00382 ATPases associated with a variety of cellular activities C3029_RS16835 SM00028 Tetratricopeptide repeats C3029_RS16855 SM00938 Nitrogen regulatory protein P-II C3029_RS16860 SM00382 ATPases associated with a variety of cellular activities C3029_RS16860 SM00448 cheY-homologous receiver domain C3029_RS16870 SM00387 Histidine kinase-like ATPases C3029_RS16870 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS16875 SM01211 C3029_RS16875 C3029_RS16880 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS16945 SM00358 Double-stranded RNA binding motif C3029_RS16945 SM00535 Ribonuclease III family C3029_RS16995 SM00487 DEAD-like helicases superfamily C3029_RS16995 SM00490 helicase superfamily c-terminal domain C3029_RS17020 SM00986 Uracil DNA glycosylase superfamily C3029_RS17020 SM00987 UreE urease accessory protein, C-terminal domain C3029_RS17025 SM00967 RNA 2'-O ribose methyltransferase substrate binding C3029_RS17040 SM01144 C3029_RS17040 C3029_RS17045 SM00881 CoA binding domain C3029_RS17050 SM00155 Phospholipase D. Active site motifs. C3029_RS17085 SM00382 ATPases associated with a variety of cellular activities C3029_RS17085 SM01086 C-terminal, D2-small domain, of ClpB protein C3029_RS17095 SM00363 S4 RNA-binding domain C3029_RS17115 SM00830 Chorismate mutase type II C3029_RS17120 SM00830 Chorismate mutase type II C3029_RS17140 SM00267 diguanylate cyclase C3029_RS17170 SM00382 ATPases associated with a variety of cellular activities C3029_RS17170 SM00962 SRP54-type protein, GTPase domain C3029_RS17170 SM00963 SRP54-type protein, helical bundle domain C3029_RS17180 SM01091 Transporter associated domain C3029_RS17235 SM00857 Resolvase, N terminal domain C3029_RS17240 SM00470 ParB-like nuclease domain C3029_RS17245 SM00470 ParB-like nuclease domain C3029_RS17280 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS17280 SM00895 C3029_RS17280 C3029_RS17285 SM00257 Lysin motif C3029_RS17285 SM00749 bacterial OsmY and nodulation domain C3029_RS17295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3029_RS17300 SM00450 Rhodanese Homology Domain C3029_RS17305 SM00528 Domain in histone-like proteins of HNS family C3029_RS17345 SM00382 ATPases associated with a variety of cellular activities C3029_RS17375 SM00347 helix_turn_helix multiple antibiotic resistance protein C3029_RS17440 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C3029_RS17455 SM00382 ATPases associated with a variety of cellular activities C3029_RS17495 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS17495 SM01134 C3029_RS17495 C3029_RS17505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3029_RS17505 SM00382 ATPases associated with a variety of cellular activities C3029_RS17510 SM00849 Metallo-beta-lactamase superfamily C3029_RS17530 SM00354 helix_turn _helix lactose operon repressor C3029_RS17620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3029_RS17620 SM00382 ATPases associated with a variety of cellular activities C3029_RS17630 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C3029_RS17630 SM00534 ATPase domain of DNA mismatch repair MUTS family C3029_RS17640 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS17640 SM01134 C3029_RS17640 C3029_RS17655 SM01007 Class II Aldolase and Adducin N-terminal domain C3029_RS17675 SM00257 Lysin motif C3029_RS17785 SM00893 Electron transfer flavoprotein domain C3029_RS17830 SM01192 C3029_RS17830 C3029_RS17830 SM01193 C3029_RS17830 C3029_RS17850 SM00966 SpoVT / AbrB like domain C3029_RS17855 SM00954 Region found in RelA / SpoT proteins C3029_RS17865 SM00073 Histidine Phosphotransfer domain C3029_RS17865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS17865 SM00387 Histidine kinase-like ATPases C3029_RS17865 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS17865 SM00448 cheY-homologous receiver domain C3029_RS17870 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3029_RS17875 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3029_RS17930 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C3029_RS17930 SM00475 5'-3' exonuclease C3029_RS17950 SM01007 Class II Aldolase and Adducin N-terminal domain C3029_RS17955 SM00354 helix_turn _helix lactose operon repressor C3029_RS17975 SM00382 ATPases associated with a variety of cellular activities C3029_RS17995 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS17995 SM01134 C3029_RS17995 C3029_RS18035 SM00925 MltA specific insert domain C3029_RS18055 SM00646 C3029_RS18055 C3029_RS18065 SM00382 ATPases associated with a variety of cellular activities C3029_RS18115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3029_RS18135 SM00927 DNA mismatch repair enzyme MutH C3029_RS18160 SM00563 Phosphate acyltransferases C3029_RS18165 SM00354 helix_turn _helix lactose operon repressor C3029_RS18255 SM00257 Lysin motif C3029_RS18260 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3029_RS18265 SM01092 CO dehydrogenase flavoprotein C-terminal domain C3029_RS18275 SM00091 PAS domain C3029_RS18275 SM00382 ATPases associated with a variety of cellular activities C3029_RS18330 SM01092 CO dehydrogenase flavoprotein C-terminal domain C3029_RS18335 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3029_RS18365 SM00861 Transketolase, pyrimidine binding domain C3029_RS18400 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3029_RS18495 SM01011 Aminopeptidase P, N-terminal domain C3029_RS18535 SM01022 C3029_RS18535 C3029_RS18580 SM00937 C3029_RS18580 C3029_RS18665 SM00731 SprT homologues. C3029_RS18690 SM00732 Likely ribonuclease with RNase H fold. C3029_RS18695 SM00382 ATPases associated with a variety of cellular activities C3029_RS18710 SM01152 C3029_RS18710 C3029_RS18720 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS18730 SM00870 C3029_RS18730 C3029_RS18755 SM00478 endonuclease III C3029_RS18755 SM00525 C3029_RS18755 C3029_RS18815 SM01276 C3029_RS18815 C3029_RS18855 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS18855 SM00895 C3029_RS18855 C3029_RS19045 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS19075 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS19085 SM00563 Phosphate acyltransferases C3029_RS19090 SM00434 DNA Topoisomerase IV C3029_RS19100 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS19110 SM00871 Bacterial transcription activator, effector binding domain C3029_RS19120 SM00448 cheY-homologous receiver domain C3029_RS19120 SM00862 Transcriptional regulatory protein, C terminal C3029_RS19125 SM00387 Histidine kinase-like ATPases C3029_RS19125 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS19145 SM00387 Histidine kinase-like ATPases C3029_RS19145 SM00433 TopoisomeraseII C3029_RS19245 SM00244 prohibitin homologues C3029_RS19270 SM01118 C3029_RS19270 C3029_RS19280 SM00287 Bacterial SH3 domain homologues C3029_RS19295 SM00905 Dihydroneopterin aldolase C3029_RS19300 SM01207 C3029_RS19300 C3029_RS19335 SM00400 zinc finger C3029_RS19335 SM00493 C3029_RS19335 C3029_RS19335 SM00766 DNA primase DnaG DnaB-binding C3029_RS19365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C3029_RS19365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C3029_RS19380 SM00354 helix_turn _helix lactose operon repressor C3029_RS19385 SM01038 Beta galactosidase small chain C3029_RS19415 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS19465 SM00858 C3029_RS19465 C3029_RS19480 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS19480 SM00895 C3029_RS19480 C3029_RS19635 SM00858 C3029_RS19635 C3029_RS19650 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS19650 SM01134 C3029_RS19650 C3029_RS19755 SM00749 bacterial OsmY and nodulation domain C3029_RS19780 SM00465 GIY-YIG type nucleases (URI domain) C3029_RS19820 SM00487 DEAD-like helicases superfamily C3029_RS19820 SM00490 helicase superfamily c-terminal domain C3029_RS19825 SM00028 Tetratricopeptide repeats C3029_RS19830 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS19830 SM00322 K homology RNA-binding domain C3029_RS19835 SM01387 C3029_RS19835 C3029_RS19855 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS19900 SM00382 ATPases associated with a variety of cellular activities C3029_RS19910 SM01103 C3029_RS19910 C3029_RS19985 SM00382 ATPases associated with a variety of cellular activities C3029_RS20015 SM00382 ATPases associated with a variety of cellular activities C3029_RS20060 SM00073 Histidine Phosphotransfer domain C3029_RS20060 SM00091 PAS domain C3029_RS20060 SM00387 Histidine kinase-like ATPases C3029_RS20060 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS20060 SM00448 cheY-homologous receiver domain C3029_RS20065 SM00729 Elongator protein 3, MiaB family, Radical SAM C3029_RS20110 SM01130 C3029_RS20110 C3029_RS20115 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS20115 SM00895 C3029_RS20115 C3029_RS20155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3029_RS20160 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3029_RS20215 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS20245 SM00052 Putative diguanylate phosphodiesterase C3029_RS20245 SM00267 diguanylate cyclase C3029_RS20250 SM00829 Enoylreductase C3029_RS20275 SM00878 Biotin carboxylase C-terminal domain C3029_RS20340 SM00062 Bacterial periplasmic substrate-binding proteins C3029_RS20355 SM00382 ATPases associated with a variety of cellular activities C3029_RS20460 SM00422 helix_turn_helix, mercury resistance C3029_RS20475 SM00662 RNA polymerases D C3029_RS20480 SM00363 S4 RNA-binding domain C3029_RS20480 SM01390 C3029_RS20480 C3029_RS20545 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C3029_RS20550 SM01374 C3029_RS20550 C3029_RS20570 SM00322 K homology RNA-binding domain C3029_RS20585 SM01382 C3029_RS20585 C3029_RS20585 SM01383 C3029_RS20585 C3029_RS20605 SM01403 C3029_RS20605 C3029_RS20630 SM00382 ATPases associated with a variety of cellular activities C3029_RS20690 SM00495 Chitin-binding domain type 3 C3029_RS20700 SM00838 Elongation factor G C-terminus C3029_RS20700 SM00889 Elongation factor G, domain IV C3029_RS20765 SM00382 ATPases associated with a variety of cellular activities C3029_RS20795 SM00100 Cyclic nucleotide-monophosphate binding domain C3029_RS20795 SM00419 helix_turn_helix, cAMP Regulatory protein C3029_RS20880 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS20880 SM00866 C3029_RS20880 C3029_RS20970 SM00965 Secretin and TonB N terminus short domain C3029_RS21015 SM00363 S4 RNA-binding domain C3029_RS21040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3029_RS21040 SM00387 Histidine kinase-like ATPases C3029_RS21040 SM00388 His Kinase A (phosphoacceptor) domain C3029_RS21045 SM00448 cheY-homologous receiver domain C3029_RS21045 SM00862 Transcriptional regulatory protein, C terminal C3029_RS21055 SM00316 Ribosomal protein S1-like RNA-binding domain C3029_RS21055 SM00732 Likely ribonuclease with RNase H fold. C3029_RS21060 SM00899 C3029_RS21060 C3029_RS21110 SM00421 helix_turn_helix, Lux Regulon C3029_RS21125 SM00382 ATPases associated with a variety of cellular activities C3029_RS21130 SM00420 helix_turn_helix, Deoxyribose operon repressor C3029_RS21130 SM01134 C3029_RS21130 C3029_RS21140 SM00450 Rhodanese Homology Domain C3029_RS21180 SM00642 Alpha-amylase domain C3029_RS21185 SM00642 Alpha-amylase domain C3029_RS21190 SM00859 Semialdehyde dehydrogenase, NAD binding domain C3029_RS21210 SM00354 helix_turn _helix lactose operon repressor C3029_RS21260 SM00382 ATPases associated with a variety of cellular activities C3029_RS21285 SM00382 ATPases associated with a variety of cellular activities C3029_RS21290 SM00382 ATPases associated with a variety of cellular activities C3029_RS21335 SM00382 ATPases associated with a variety of cellular activities C3029_RS21340 SM00382 ATPases associated with a variety of cellular activities C3029_RS21340 SM00962 SRP54-type protein, GTPase domain C3029_RS21340 SM00963 SRP54-type protein, helical bundle domain C3029_RS21415 SM00382 ATPases associated with a variety of cellular activities C3029_RS21420 SM00382 ATPases associated with a variety of cellular activities C3029_RS21455 SM00382 ATPases associated with a variety of cellular activities C3029_RS21540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3029_RS21575 SM00421 helix_turn_helix, Lux Regulon C3029_RS21620 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS21625 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS21635 SM01235 C3029_RS21635 C3029_RS21645 SM00421 helix_turn_helix, Lux Regulon C3029_RS21670 SM00052 Putative diguanylate phosphodiesterase C3029_RS21695 SM00052 Putative diguanylate phosphodiesterase C3029_RS21695 SM00267 diguanylate cyclase C3029_RS21700 SM00028 Tetratricopeptide repeats C3029_RS21765 SM00382 ATPases associated with a variety of cellular activities C3029_RS21770 SM00382 ATPases associated with a variety of cellular activities C3029_RS21855 SM00530 Helix-turn-helix XRE-family like proteins C3029_RS21860 SM00357 Cold shock protein domain C3029_RS21935 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS21940 SM00047 Lysozyme subfamily 2 C3029_RS21945 SM00642 Alpha-amylase domain C3029_RS21965 SM00346 helix_turn_helix isocitrate lyase regulation C3029_RS22000 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C3029_RS22010 SM01007 Class II Aldolase and Adducin N-terminal domain C3029_RS22015 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS22155 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS22155 SM00895 C3029_RS22155 C3029_RS22170 SM00971 Serine acetyltransferase, N-terminal C3029_RS22190 SM00450 Rhodanese Homology Domain C3029_RS22215 SM00829 Enoylreductase C3029_RS22305 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C3029_RS22305 SM01232 C3029_RS22305 C3029_RS22365 SM00532 Ligase N family C3029_RS22370 SM00072 Guanylate kinase homologues. C3029_RS22375 SM01409 C3029_RS22375 C3029_RS22380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C3029_RS22380 SM00954 Region found in RelA / SpoT proteins C3029_RS22390 SM00487 DEAD-like helicases superfamily C3029_RS22390 SM00490 helicase superfamily c-terminal domain C3029_RS22440 SM00354 helix_turn _helix lactose operon repressor C3029_RS22480 SM00869 Autotransporter beta-domain C3029_RS22580 SM00387 Histidine kinase-like ATPases C3029_RS22585 SM00421 helix_turn_helix, Lux Regulon C3029_RS22585 SM00448 cheY-homologous receiver domain C3029_RS22655 SM00342 helix_turn_helix, arabinose operon control protein C3029_RS22710 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3029_RS22725 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3029_RS22725 SM00895 C3029_RS22725 C3029_RS22750 SM00387 Histidine kinase-like ATPases C3029_RS22750 SM00433 TopoisomeraseII C3029_RS22760 SM00480 DNA polymerase III beta subunit C3029_RS22765 SM00382 ATPases associated with a variety of cellular activities C3029_RS22765 SM00760 Bacterial dnaA protein helix-turn-helix domain