locus-tag class description DK885_RS00005 PF13932 GidA associated domain DK885_RS00005 PF01134 Glucose inhibited division protein A DK885_RS00010 PF02527 rRNA small subunit methyltransferase G DK885_RS00015 PF03899 ATP synthase I chain DK885_RS00020 PF00119 ATP synthase A chain DK885_RS00025 PF00137 ATP synthase subunit C DK885_RS00030 PF00430 ATP synthase B/B' CF(0) DK885_RS00035 PF00213 ATP synthase delta (OSCP) subunit DK885_RS00040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK885_RS00040 PF00306 ATP synthase alpha/beta chain, C terminal domain DK885_RS00040 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK885_RS00045 PF00231 ATP synthase DK885_RS00050 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK885_RS00050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK885_RS00055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DK885_RS00055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DK885_RS00060 PF12804 MobA-like NTP transferase domain DK885_RS00060 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS00060 PF14602 Hexapeptide repeat of succinyl-transferase DK885_RS00065 PF01380 SIS domain DK885_RS00070 PF12849 PBP superfamily domain DK885_RS00075 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS00085 PF00005 ABC transporter DK885_RS00090 PF01895 PhoU domain DK885_RS00095 PF00874 PRD domain DK885_RS00095 PF03123 CAT RNA binding domain DK885_RS00100 PF02378 Phosphotransferase system, EIIC DK885_RS00100 PF00367 phosphotransferase system, EIIB DK885_RS00100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK885_RS00105 PF00232 Glycosyl hydrolase family 1 DK885_RS00110 PF02264 LamB porin DK885_RS00110 PF11471 Maltoporin periplasmic N-terminal extension DK885_RS00115 PF00756 Putative esterase DK885_RS00115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DK885_RS00120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DK885_RS00125 PF03691 Uncharacterised protein family (UPF0167) DK885_RS00135 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS00140 PF00860 Permease family DK885_RS00145 PF03358 NADPH-dependent FMN reductase DK885_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS00155 PF03466 LysR substrate binding domain DK885_RS00160 PF07690 Major Facilitator Superfamily DK885_RS00165 PF03222 Tryptophan/tyrosine permease family DK885_RS00170 PF01212 Beta-eliminating lyase DK885_RS00175 PF08053 Tryptophanase operon leader peptide DK885_RS00180 PF01926 50S ribosome-binding GTPase DK885_RS00180 PF12631 MnmE helical domain DK885_RS00180 PF10396 GTP-binding protein TrmE N-terminus DK885_RS00185 PF02096 60Kd inner membrane protein DK885_RS00185 PF14849 YidC periplasmic domain DK885_RS00190 PF01809 Putative membrane protein insertion efficiency factor DK885_RS00195 PF00825 Ribonuclease P DK885_RS00200 PF00468 Ribosomal protein L34 DK885_RS00210 PF11638 DnaA N-terminal domain DK885_RS00210 PF00308 Bacterial dnaA protein DK885_RS00210 PF08299 Bacterial dnaA protein helix-turn-helix DK885_RS00215 PF00712 DNA polymerase III beta subunit, N-terminal domain DK885_RS00215 PF02767 DNA polymerase III beta subunit, central domain DK885_RS00215 PF02768 DNA polymerase III beta subunit, C-terminal domain DK885_RS00220 PF02463 RecF/RecN/SMC N terminal domain DK885_RS00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS00225 PF00204 DNA gyrase B DK885_RS00225 PF00986 DNA gyrase B subunit, carboxyl terminus DK885_RS00225 PF01751 Toprim domain DK885_RS00225 PF18053 DNA gyrase B subunit insert domain DK885_RS00230 PF06078 Bacterial protein of unknown function (DUF937) DK885_RS00245 PF07729 FCD domain DK885_RS00245 PF00392 Bacterial regulatory proteins, gntR family DK885_RS00250 PF05035 2-keto-3-deoxy-galactonokinase DK885_RS00255 PF01081 KDPG and KHG aldolase DK885_RS00260 PF13378 Enolase C-terminal domain-like DK885_RS00260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DK885_RS00265 PF07690 Major Facilitator Superfamily DK885_RS00270 PF01494 FAD binding domain DK885_RS00275 PF07676 WD40-like Beta Propeller Repeat DK885_RS00275 PF12566 Protein of unknown function (DUF3748) DK885_RS00280 PF07119 Protein of unknown function (DUF1375) DK885_RS00285 PF00011 Hsp20/alpha crystallin family DK885_RS00290 PF00011 Hsp20/alpha crystallin family DK885_RS00295 PF06826 Predicted Permease Membrane Region DK885_RS00295 PF02080 TrkA-C domain DK885_RS00300 PF07702 UTRA domain DK885_RS00300 PF00392 Bacterial regulatory proteins, gntR family DK885_RS00315 PF12833 Helix-turn-helix domain DK885_RS00315 PF02311 AraC-like ligand binding domain DK885_RS00320 PF00474 Sodium:solute symporter family DK885_RS00325 PF16347 Domain of unknown function (DUF4976) DK885_RS00325 PF00884 Sulfatase DK885_RS00335 PF02656 Domain of unknown function (DUF202) DK885_RS00340 PF02656 Domain of unknown function (DUF202) DK885_RS00350 PF07690 Major Facilitator Superfamily DK885_RS00360 PF13939 Toxin TisB, type I toxin-antitoxin system DK885_RS00380 PF08049 IlvB leader peptide DK885_RS00385 PF00205 Thiamine pyrophosphate enzyme, central domain DK885_RS00385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DK885_RS00385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DK885_RS00390 PF01842 ACT domain DK885_RS00395 PF00196 Bacterial regulatory proteins, luxR family DK885_RS00395 PF00072 Response regulator receiver domain DK885_RS00400 PF07730 Histidine kinase DK885_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS00400 PF05231 MASE1 DK885_RS00405 PF07690 Major Facilitator Superfamily DK885_RS00410 PF07690 Major Facilitator Superfamily DK885_RS00415 PF13382 Adenine deaminase C-terminal domain DK885_RS00415 PF01979 Amidohydrolase family DK885_RS00420 PF00860 Permease family DK885_RS00425 PF06711 Protein of unknown function (DUF1198) DK885_RS00435 PF07690 Major Facilitator Superfamily DK885_RS00450 PF03180 NLPA lipoprotein DK885_RS00455 PF00892 EamA-like transporter family DK885_RS00460 PF07690 Major Facilitator Superfamily DK885_RS00480 PF13802 Galactose mutarotase-like DK885_RS00480 PF01055 Glycosyl hydrolases family 31 DK885_RS00485 PF05170 AsmA family DK885_RS00490 PF00860 Permease family DK885_RS00495 PF03616 Sodium/glutamate symporter DK885_RS00500 PF17191 RecG wedge domain DK885_RS00500 PF00271 Helicase conserved C-terminal domain DK885_RS00500 PF00270 DEAD/DEAH box helicase DK885_RS00505 PF00588 SpoU rRNA Methylase family DK885_RS00505 PF12105 SpoU, rRNA methylase, C-terminal DK885_RS00510 PF02824 TGS domain DK885_RS00510 PF04607 Region found in RelA / SpoT proteins DK885_RS00510 PF13291 ACT domain DK885_RS00515 PF01192 RNA polymerase Rpb6 DK885_RS00520 PF00625 Guanylate kinase DK885_RS00525 PF01653 NAD-dependent DNA ligase adenylation domain DK885_RS00525 PF03120 NAD-dependent DNA ligase OB-fold domain DK885_RS00530 PF03458 UPF0126 domain DK885_RS00540 PF08340 Domain of unknown function (DUF1732) DK885_RS00540 PF03755 YicC-like family, N-terminal region DK885_RS00550 PF01138 3' exoribonuclease family, domain 1 DK885_RS00550 PF03725 3' exoribonuclease family, domain 2 DK885_RS00555 PF00156 Phosphoribosyl transferase domain DK885_RS00560 PF00440 Bacterial regulatory proteins, tetR family DK885_RS00565 PF00692 dUTPase DK885_RS00570 PF02441 Flavoprotein DK885_RS00570 PF04127 DNA / pantothenate metabolism flavoprotein DK885_RS00575 PF04002 RadC-like JAB domain DK885_RS00580 PF00830 Ribosomal L28 family DK885_RS00585 PF00471 Ribosomal protein L33 DK885_RS00590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DK885_RS00590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DK885_RS00590 PF06827 Zinc finger found in FPG and IleRS DK885_RS00595 PF01467 Cytidylyltransferase-like DK885_RS00600 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DK885_RS00605 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DK885_RS00610 PF13439 Glycosyltransferase Family 4 DK885_RS00610 PF00534 Glycosyl transferases group 1 DK885_RS00625 PF00534 Glycosyl transferases group 1 DK885_RS00625 PF13439 Glycosyltransferase Family 4 DK885_RS00630 PF08437 Glycosyl transferase family 8 C-terminal DK885_RS00630 PF01501 Glycosyl transferase family 8 DK885_RS00635 PF01501 Glycosyl transferase family 8 DK885_RS00635 PF08437 Glycosyl transferase family 8 C-terminal DK885_RS00640 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) DK885_RS00650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DK885_RS00655 PF04932 O-Antigen ligase DK885_RS00660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DK885_RS00665 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DK885_RS00670 PF01370 NAD dependent epimerase/dehydratase family DK885_RS00675 PF09612 Bacterial protein of unknown function (HtrL_YibB) DK885_RS00680 PF00155 Aminotransferase class I and II DK885_RS00685 PF00107 Zinc-binding dehydrogenase DK885_RS00685 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS00690 PF00535 Glycosyl transferase family 2 DK885_RS00695 PF04748 Divergent polysaccharide deacetylase DK885_RS00700 PF01551 Peptidase family M23 DK885_RS00705 PF01676 Metalloenzyme superfamily DK885_RS00705 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DK885_RS00715 PF00581 Rhodanese-like domain DK885_RS00720 PF00462 Glutaredoxin DK885_RS00725 PF02556 Preprotein translocase subunit SecB DK885_RS00730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DK885_RS00730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DK885_RS00735 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS00735 PF06426 Serine acetyltransferase, N-terminal DK885_RS00740 PF00588 SpoU rRNA Methylase family DK885_RS00745 PF01070 FMN-dependent dehydrogenase DK885_RS00750 PF07729 FCD domain DK885_RS00750 PF00392 Bacterial regulatory proteins, gntR family DK885_RS00755 PF02652 L-lactate permease DK885_RS00765 PF10928 Protein of unknown function (DUF2810) DK885_RS00775 PF05068 Mannitol repressor DK885_RS00780 PF08125 Mannitol dehydrogenase C-terminal domain DK885_RS00780 PF01232 Mannitol dehydrogenase Rossmann domain DK885_RS00785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS00785 PF02378 Phosphotransferase system, EIIC DK885_RS00785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS00790 PF11742 Protein of unknown function (DUF3302) DK885_RS00795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS00795 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS00800 PF15596 Immunity protein 57 DK885_RS00825 PF03130 PBS lyase HEAT-like repeat DK885_RS00830 PF03527 RHS protein DK885_RS00830 PF05593 RHS Repeat DK885_RS00830 PF15606 Bacterial toxin 34 DK885_RS00835 PF00043 Glutathione S-transferase, C-terminal domain DK885_RS00835 PF13417 Glutathione S-transferase, N-terminal domain DK885_RS00840 PF03841 L-seryl-tRNA selenium transferase DK885_RS00840 PF12390 Selenocysteine synthase N terminal DK885_RS00845 PF00009 Elongation factor Tu GTP binding domain DK885_RS00845 PF03144 Elongation factor Tu domain 2 DK885_RS00845 PF09106 Elongation factor SelB, winged helix DK885_RS00845 PF09107 Elongation factor SelB, winged helix DK885_RS00850 PF00465 Iron-containing alcohol dehydrogenase DK885_RS00855 PF00171 Aldehyde dehydrogenase family DK885_RS00870 PF11742 Protein of unknown function (DUF3302) DK885_RS00875 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS00875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS00880 PF03466 LysR substrate binding domain DK885_RS00880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS00885 PF06629 MltA-interacting protein MipA DK885_RS00895 PF00596 Class II Aldolase and Adducin N-terminal domain DK885_RS00900 PF01261 Xylose isomerase-like TIM barrel DK885_RS00905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DK885_RS00910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS00910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK885_RS00915 PF03480 Bacterial extracellular solute-binding protein, family 7 DK885_RS00920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DK885_RS00925 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DK885_RS00930 PF04074 YhcH/YjgK/YiaL DK885_RS00935 PF02615 Malate/L-lactate dehydrogenase DK885_RS00940 PF09339 IclR helix-turn-helix domain DK885_RS00940 PF01614 Bacterial transcriptional regulator DK885_RS00945 PF13247 4Fe-4S dicluster domain DK885_RS00950 PF00155 Aminotransferase class I and II DK885_RS00955 PF00128 Alpha amylase, catalytic domain DK885_RS00960 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK885_RS00965 PF12833 Helix-turn-helix domain DK885_RS00970 PF02653 Branched-chain amino acid transport system / permease component DK885_RS00975 PF00005 ABC transporter DK885_RS00980 PF13407 Periplasmic binding protein domain DK885_RS00990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK885_RS00990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS00995 PF05360 yiaA/B two helix domain DK885_RS01000 PF05360 yiaA/B two helix domain DK885_RS01005 PF01757 Acyltransferase family DK885_RS01010 PF13983 YsaB-like lipoprotein DK885_RS01015 PF02091 Glycyl-tRNA synthetase alpha subunit DK885_RS01020 PF05746 DALR anticodon binding domain DK885_RS01020 PF02092 Glycyl-tRNA synthetase beta subunit DK885_RS01030 PF01848 Hok/gef family DK885_RS01035 PF00313 'Cold-shock' DNA-binding domain DK885_RS01040 PF01381 Helix-turn-helix DK885_RS01045 PF11254 Protein of unknown function (DUF3053) DK885_RS01050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DK885_RS01050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DK885_RS01055 PF00691 OmpA family DK885_RS01055 PF13488 Glycine zipper DK885_RS01060 PF00384 Molybdopterin oxidoreductase DK885_RS01060 PF18364 Molybdopterin oxidoreductase N-terminal domain DK885_RS01060 PF01568 Molydopterin dinucleotide binding domain DK885_RS01065 PF00583 Acetyltransferase (GNAT) family DK885_RS01070 PF03352 Methyladenine glycosylase DK885_RS01075 PF03797 Autotransporter beta-domain DK885_RS01085 PF07690 Major Facilitator Superfamily DK885_RS01090 PF00884 Sulfatase DK885_RS01090 PF08019 Phosphoethanolamine transferase EptA/EptB DK885_RS01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS01115 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS01120 PF12911 N-terminal TM domain of oligopeptide transport permease C DK885_RS01120 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS01125 PF00005 ABC transporter DK885_RS01125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS01130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS01130 PF00005 ABC transporter DK885_RS01135 PF03222 Tryptophan/tyrosine permease family DK885_RS01150 PF13940 Toxin Ldr, type I toxin-antitoxin system DK885_RS01155 PF11658 Cellulose biosynthesis protein BcsG DK885_RS01160 PF11120 Cellulose biosynthesis protein BcsF DK885_RS01165 PF10995 Cellulose biosynthesis GIL DK885_RS01170 PF10945 Cellulose biosynthesis protein BcsR DK885_RS01180 PF03552 Cellulose synthase DK885_RS01180 PF00535 Glycosyl transferase family 2 DK885_RS01180 PF07238 PilZ domain DK885_RS01185 PF03170 Bacterial cellulose synthase subunit DK885_RS01190 PF01270 Glycosyl hydrolases family 8 DK885_RS01195 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DK885_RS01200 PF00672 HAMP domain DK885_RS01200 PF00563 EAL domain DK885_RS01200 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS01200 PF17154 Gammaproteobacterial periplasmic sensor domain DK885_RS01210 PF00375 Sodium:dicarboxylate symporter family DK885_RS01215 PF05193 Peptidase M16 inactive domain DK885_RS01215 PF00675 Insulinase (Peptidase family M16) DK885_RS01220 PF00294 pfkB family carbohydrate kinase DK885_RS01230 PF00563 EAL domain DK885_RS01235 PF05170 AsmA family DK885_RS01240 PF07690 Major Facilitator Superfamily DK885_RS01240 PF00083 Sugar (and other) transporter DK885_RS01245 PF03631 Virulence factor BrkB DK885_RS01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS01250 PF03466 LysR substrate binding domain DK885_RS01255 PF00196 Bacterial regulatory proteins, luxR family DK885_RS01260 PF01204 Trehalase DK885_RS01265 PF14376 Haem-binding domain DK885_RS01265 PF00034 Cytochrome c DK885_RS01265 PF03150 Di-haem cytochrome c peroxidase DK885_RS01270 PF00282 Pyridoxal-dependent decarboxylase conserved domain DK885_RS01275 PF12833 Helix-turn-helix domain DK885_RS01280 PF12833 Helix-turn-helix domain DK885_RS01290 PF00873 AcrB/AcrD/AcrF family DK885_RS01295 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS01295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS01305 PF00196 Bacterial regulatory proteins, luxR family DK885_RS01310 PF03729 Short repeat of unknown function (DUF308) DK885_RS01315 PF06411 HdeA/HdeB family DK885_RS01320 PF06411 HdeA/HdeB family DK885_RS01325 PF02308 MgtC family DK885_RS01330 PF00196 Bacterial regulatory proteins, luxR family DK885_RS01340 PF03843 Outer membrane lipoprotein Slp family DK885_RS01350 PF05598 Transposase domain (DUF772) DK885_RS01350 PF01609 Transposase DDE domain DK885_RS01360 PF03960 ArsC family DK885_RS01365 PF02040 Arsenical pump membrane protein DK885_RS01370 PF01022 Bacterial regulatory protein, arsR family DK885_RS01385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK885_RS01385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS01390 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DK885_RS01395 PF01432 Peptidase family M3 DK885_RS01400 PF04445 Putative SAM-dependent methyltransferase DK885_RS01405 PF00854 POT family DK885_RS01415 PF00582 Universal stress protein family DK885_RS01420 PF10625 Universal stress protein B (UspB) DK885_RS01425 PF01384 Phosphate transporter family DK885_RS01435 PF10951 Protein of unknown function (DUF2776) DK885_RS01450 PF13258 Domain of unknown function (DUF4049) DK885_RS01455 PF13533 Biotin-lipoyl like DK885_RS01460 PF00005 ABC transporter DK885_RS01470 PF01609 Transposase DDE domain DK885_RS01470 PF13808 DDE_Tnp_1-associated DK885_RS01475 PF03130 PBS lyase HEAT-like repeat DK885_RS01480 PF15631 NTF2 fold immunity protein DK885_RS01485 PF14220 Domain of unknown function (DUF4329) DK885_RS01485 PF03527 RHS protein DK885_RS01485 PF05593 RHS Repeat DK885_RS01490 PF01402 Ribbon-helix-helix protein, copG family DK885_RS01490 PF08753 NikR C terminal nickel binding domain DK885_RS01495 PF00005 ABC transporter DK885_RS01500 PF00005 ABC transporter DK885_RS01505 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS01510 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS01515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS01520 PF01648 4'-phosphopantetheinyl transferase superfamily DK885_RS01525 PF01594 AI-2E family transporter DK885_RS01530 PF07690 Major Facilitator Superfamily DK885_RS01535 PF08786 DcrB DK885_RS01540 PF02592 Putative vitamin uptake transporter DK885_RS01545 PF01206 Sulfurtransferase TusA DK885_RS01550 PF00403 Heavy-metal-associated domain DK885_RS01555 PF07947 YhhN family DK885_RS01560 PF10694 Protein of unknown function (DUF2500) DK885_RS01565 PF06611 Protein of unknown function (DUF1145) DK885_RS01575 PF00448 SRP54-type protein, GTPase domain DK885_RS01575 PF02881 SRP54-type protein, helical bundle domain DK885_RS01580 PF00005 ABC transporter DK885_RS01585 PF18075 FtsX extracellular domain DK885_RS01585 PF02687 FtsX-like permease family DK885_RS01590 PF04542 Sigma-70 region 2 DK885_RS01590 PF04545 Sigma-70, region 4 DK885_RS01595 PF13458 Periplasmic binding protein DK885_RS01600 PF12568 Acetyltransferase (GNAT) domain, PanZ DK885_RS01605 PF13458 Periplasmic binding protein DK885_RS01610 PF02653 Branched-chain amino acid transport system / permease component DK885_RS01615 PF11862 Domain of unknown function (DUF3382) DK885_RS01615 PF02653 Branched-chain amino acid transport system / permease component DK885_RS01620 PF00005 ABC transporter DK885_RS01620 PF12399 Branched-chain amino acid ATP-binding cassette transporter DK885_RS01625 PF00005 ABC transporter DK885_RS01630 PF13416 Bacterial extracellular solute-binding protein DK885_RS01635 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS01645 PF00005 ABC transporter DK885_RS01645 PF17912 MalK OB fold domain DK885_RS01650 PF03009 Glycerophosphoryl diester phosphodiesterase family DK885_RS01655 PF10956 Protein of unknown function (DUF2756) DK885_RS01665 PF15567 Immunity protein 35 DK885_RS01685 PF05638 Type VI secretion system effector, Hcp DK885_RS01690 PF00583 Acetyltransferase (GNAT) family DK885_RS01700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK885_RS01700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DK885_RS01705 PF02678 Pirin DK885_RS01705 PF17954 Quercetinase C-terminal cupin domain DK885_RS01710 PF00356 Bacterial regulatory proteins, lacI family DK885_RS01710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DK885_RS01715 PF01202 Shikimate kinase DK885_RS01720 PF02447 GntP family permease DK885_RS01725 PF01914 MarC family integral membrane protein DK885_RS01730 PF01118 Semialdehyde dehydrogenase, NAD binding domain DK885_RS01730 PF02774 Semialdehyde dehydrogenase, dimerisation domain DK885_RS01735 PF00128 Alpha amylase, catalytic domain DK885_RS01735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DK885_RS01735 PF02806 Alpha amylase, C-terminal all-beta domain DK885_RS01740 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DK885_RS01740 PF18390 Glycogen debranching enzyme C-terminal domain DK885_RS01740 PF00128 Alpha amylase, catalytic domain DK885_RS01745 PF00483 Nucleotidyl transferase DK885_RS01750 PF08323 Starch synthase catalytic domain DK885_RS01750 PF00534 Glycosyl transferases group 1 DK885_RS01755 PF00343 Carbohydrate phosphorylase DK885_RS01765 PF01266 FAD dependent oxidoreductase DK885_RS01765 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DK885_RS01770 PF00581 Rhodanese-like domain DK885_RS01775 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DK885_RS01775 PF01694 Rhomboid family DK885_RS01780 PF00455 DeoR C terminal sensor domain DK885_RS01780 PF08220 DeoR-like helix-turn-helix domain DK885_RS01785 PF06956 Regulator of RNA terminal phosphate cyclase DK885_RS01785 PF00158 Sigma-54 interaction domain DK885_RS01790 PF01139 tRNA-splicing ligase RtcB DK885_RS01795 PF01137 RNA 3'-terminal phosphate cyclase DK885_RS01795 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain DK885_RS01800 PF17874 MalT-like TPR region DK885_RS01800 PF00196 Bacterial regulatory proteins, luxR family DK885_RS01805 PF00343 Carbohydrate phosphorylase DK885_RS01810 PF02446 4-alpha-glucanotransferase DK885_RS01815 PF02447 GntP family permease DK885_RS01820 PF01521 Iron-sulphur cluster biosynthesis DK885_RS01820 PF01106 NifU-like domain DK885_RS01825 PF00156 Phosphoribosyl transferase domain DK885_RS01830 PF00561 alpha/beta hydrolase fold DK885_RS01835 PF04754 Putative transposase, YhgA-like DK885_RS01845 PF09012 FeoC like transcriptional regulator DK885_RS01850 PF17910 FeoB cytosolic helical domain DK885_RS01850 PF07664 Ferrous iron transport protein B C terminus DK885_RS01850 PF02421 Ferrous iron transport protein B DK885_RS01850 PF07670 Nucleoside recognition DK885_RS01855 PF04023 FeoA domain DK885_RS01865 PF16921 Tex protein YqgF-like domain DK885_RS01865 PF00575 S1 RNA binding domain DK885_RS01865 PF17674 HHH domain DK885_RS01865 PF09371 Tex-like protein N-terminal domain DK885_RS01870 PF03449 Transcription elongation factor, N-terminal DK885_RS01870 PF01272 Transcription elongation factor, GreA/GreB, C-term DK885_RS01880 PF00486 Transcriptional regulatory protein, C terminal DK885_RS01880 PF00072 Response regulator receiver domain DK885_RS01885 PF00672 HAMP domain DK885_RS01885 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS01885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS01890 PF01293 Phosphoenolpyruvate carboxykinase DK885_RS01900 PF13687 Domain of unknown function (DUF4153) DK885_RS01905 PF01430 Hsp33 protein DK885_RS01910 PF01479 S4 domain DK885_RS01915 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS01920 PF07095 Intracellular growth attenuator protein IgaA DK885_RS01925 PF00293 NUDIX domain DK885_RS01930 PF17092 Penicillin-binding protein OB-like domain DK885_RS01930 PF00912 Transglycosylase DK885_RS01930 PF00905 Penicillin binding protein transpeptidase domain DK885_RS01940 PF05137 Fimbrial assembly protein (PilN) DK885_RS01950 PF10748 DNA utilization proteins HofP DK885_RS01955 PF03958 Bacterial type II/III secretion system short domain DK885_RS01955 PF00263 Bacterial type II and III secretion system protein DK885_RS01960 PF01202 Shikimate kinase DK885_RS01965 PF01761 3-dehydroquinate synthase DK885_RS01970 PF05036 Sporulation related domain DK885_RS01975 PF02086 D12 class N6 adenine-specific DNA methyltransferase DK885_RS01980 PF00834 Ribulose-phosphate 3 epimerase family DK885_RS01985 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS01990 PF00579 tRNA synthetases class I (W and Y) DK885_RS02000 PF14503 YhfZ C-terminal domain DK885_RS02000 PF14502 Helix-turn-helix domain DK885_RS02010 PF01168 Alanine racemase, N-terminal domain DK885_RS02015 PF01676 Metalloenzyme superfamily DK885_RS02020 PF02126 Phosphotriesterase family DK885_RS02025 PF10941 Protein of unknown function DUF2620 DK885_RS02030 PF10797 Protein of unknown function DK885_RS02035 PF00155 Aminotransferase class I and II DK885_RS02040 PF07702 UTRA domain DK885_RS02040 PF00392 Bacterial regulatory proteins, gntR family DK885_RS02045 PF00294 pfkB family carbohydrate kinase DK885_RS02050 PF01261 Xylose isomerase-like TIM barrel DK885_RS02060 PF01380 SIS domain DK885_RS02065 PF13520 Amino acid permease DK885_RS02070 PF13978 Protein of unknown function (DUF4223) DK885_RS02075 PF14824 Sirohaem biosynthesis protein central DK885_RS02075 PF10414 Sirohaem synthase dimerisation region DK885_RS02075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DK885_RS02080 PF01226 Formate/nitrite transporter DK885_RS02085 PF13806 Rieske-like [2Fe-2S] domain DK885_RS02090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS02090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DK885_RS02090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DK885_RS02090 PF18267 Rubredoxin NAD+ reductase C-terminal domain DK885_RS02090 PF04324 BFD-like [2Fe-2S] binding domain DK885_RS02095 PF07690 Major Facilitator Superfamily DK885_RS02100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DK885_RS02105 PF10832 Protein of unknown function (DUF2559) DK885_RS02110 PF02661 Fic/DOC family DK885_RS02115 PF00117 Glutamine amidotransferase class-I DK885_RS02120 PF00202 Aminotransferase class-III DK885_RS02125 PF12805 FUSC-like inner membrane protein yccS DK885_RS02130 PF13545 Crp-like helix-turn-helix domain DK885_RS02130 PF00027 Cyclic nucleotide-binding domain DK885_RS02140 PF02566 OsmC-like protein DK885_RS02145 PF00485 Phosphoribulokinase / Uridine kinase family DK885_RS02150 PF06794 Uncharacterised protein family (UPF0270) DK885_RS02155 PF00561 alpha/beta hydrolase fold DK885_RS02160 PF00005 ABC transporter DK885_RS02160 PF12848 ABC transporter DK885_RS02170 PF02525 Flavodoxin-like fold DK885_RS02175 PF00999 Sodium/hydrogen exchanger family DK885_RS02175 PF02254 TrkA-N domain DK885_RS02180 PF09526 Probable metal-binding protein (DUF2387) DK885_RS02185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DK885_RS02190 PF04102 SlyX DK885_RS02195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DK885_RS02195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DK885_RS02200 PF13309 HTH domain DK885_RS02200 PF08348 YheO-like PAS domain DK885_RS02205 PF02635 DsrE/DsrF-like family DK885_RS02210 PF02635 DsrE/DsrF-like family DK885_RS02215 PF04077 DsrH like protein DK885_RS02220 PF00164 Ribosomal protein S12/S23 DK885_RS02225 PF00177 Ribosomal protein S7p/S5e DK885_RS02230 PF03764 Elongation factor G, domain IV DK885_RS02230 PF14492 Elongation Factor G, domain II DK885_RS02230 PF03144 Elongation factor Tu domain 2 DK885_RS02230 PF00679 Elongation factor G C-terminus DK885_RS02230 PF00009 Elongation factor Tu GTP binding domain DK885_RS02235 PF03143 Elongation factor Tu C-terminal domain DK885_RS02235 PF03144 Elongation factor Tu domain 2 DK885_RS02235 PF00009 Elongation factor Tu GTP binding domain DK885_RS02245 PF02839 Carbohydrate binding domain DK885_RS02250 PF04324 BFD-like [2Fe-2S] binding domain DK885_RS02255 PF00210 Ferritin-like domain DK885_RS02260 PF01478 Type IV leader peptidase family DK885_RS02265 PF04612 Type II secretion system (T2SS), protein M DK885_RS02270 PF05134 Type II secretion system (T2SS), protein L DK885_RS02270 PF12693 GspL periplasmic domain DK885_RS02275 PF03934 Type II secretion system (T2SS), protein K DK885_RS02280 PF11612 Type II secretion system (T2SS), protein J DK885_RS02280 PF07963 Prokaryotic N-terminal methylation motif DK885_RS02285 PF07963 Prokaryotic N-terminal methylation motif DK885_RS02285 PF02501 Type II secretion system (T2SS), protein I DK885_RS02290 PF07963 Prokaryotic N-terminal methylation motif DK885_RS02290 PF12019 Type II transport protein GspH DK885_RS02295 PF07963 Prokaryotic N-terminal methylation motif DK885_RS02295 PF08334 Type II secretion system (T2SS), protein G DK885_RS02300 PF00482 Type II secretion system (T2SS), protein F DK885_RS02305 PF00437 Type II/IV secretion system protein DK885_RS02310 PF03958 Bacterial type II/III secretion system short domain DK885_RS02310 PF00263 Bacterial type II and III secretion system protein DK885_RS02315 PF11356 Type II secretion system protein C DK885_RS02320 PF01471 Putative peptidoglycan binding domain DK885_RS02320 PF13401 AAA domain DK885_RS02330 PF00338 Ribosomal protein S10p/S20e DK885_RS02335 PF00297 Ribosomal protein L3 DK885_RS02340 PF00573 Ribosomal protein L4/L1 family DK885_RS02345 PF00276 Ribosomal protein L23 DK885_RS02350 PF03947 Ribosomal Proteins L2, C-terminal domain DK885_RS02350 PF00181 Ribosomal Proteins L2, RNA binding domain DK885_RS02355 PF00203 Ribosomal protein S19 DK885_RS02360 PF00237 Ribosomal protein L22p/L17e DK885_RS02365 PF07650 KH domain DK885_RS02365 PF00189 Ribosomal protein S3, C-terminal domain DK885_RS02370 PF00252 Ribosomal protein L16p/L10e DK885_RS02375 PF00831 Ribosomal L29 protein DK885_RS02380 PF00366 Ribosomal protein S17 DK885_RS02385 PF00238 Ribosomal protein L14p/L23e DK885_RS02390 PF00467 KOW motif DK885_RS02390 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DK885_RS02395 PF00281 Ribosomal protein L5 DK885_RS02395 PF00673 ribosomal L5P family C-terminus DK885_RS02400 PF00253 Ribosomal protein S14p/S29e DK885_RS02405 PF00410 Ribosomal protein S8 DK885_RS02410 PF00347 Ribosomal protein L6 DK885_RS02415 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DK885_RS02420 PF03719 Ribosomal protein S5, C-terminal domain DK885_RS02420 PF00333 Ribosomal protein S5, N-terminal domain DK885_RS02425 PF00327 Ribosomal protein L30p/L7e DK885_RS02430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DK885_RS02435 PF00344 SecY translocase DK885_RS02440 PF00444 Ribosomal protein L36 DK885_RS02445 PF00416 Ribosomal protein S13/S18 DK885_RS02450 PF00411 Ribosomal protein S11 DK885_RS02455 PF00163 Ribosomal protein S4/S9 N-terminal domain DK885_RS02455 PF01479 S4 domain DK885_RS02460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DK885_RS02460 PF01000 RNA polymerase Rpb3/RpoA insert domain DK885_RS02460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DK885_RS02465 PF01196 Ribosomal protein L17 DK885_RS02470 PF09350 Domain of unknown function (DUF1992) DK885_RS02475 PF13411 MerR HTH family regulatory protein DK885_RS02480 PF03889 Alternative ribosome-rescue factor A DK885_RS02485 PF01741 Large-conductance mechanosensitive channel, MscL DK885_RS02490 PF02080 TrkA-C domain DK885_RS02490 PF02254 TrkA-N domain DK885_RS02495 PF01029 NusB family DK885_RS02495 PF01189 16S rRNA methyltransferase RsmB/F DK885_RS02500 PF00551 Formyl transferase DK885_RS02500 PF02911 Formyl transferase, C-terminal domain DK885_RS02505 PF01327 Polypeptide deformylase DK885_RS02510 PF02481 DNA recombination-mediator protein A DK885_RS02510 PF17782 DprA winged helix domain DK885_RS02515 PF04361 Protein of unknown function (DUF494) DK885_RS02520 PF01396 Topoisomerase DNA binding C4 zinc finger DK885_RS02525 PF01300 Telomere recombination DK885_RS02530 PF08501 Shikimate dehydrogenase substrate binding domain DK885_RS02530 PF01488 Shikimate / quinate 5-dehydrogenase DK885_RS02530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DK885_RS02540 PF07369 Protein of unknown function (DUF1488) DK885_RS02545 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS02585 PF00005 ABC transporter DK885_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS02600 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS02620 PF00873 AcrB/AcrD/AcrF family DK885_RS02625 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS02625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS02635 PF00440 Bacterial regulatory proteins, tetR family DK885_RS02635 PF08361 MAATS-type transcriptional repressor, C-terminal region DK885_RS02640 PF10831 Protein of unknown function (DUF2556) DK885_RS02645 PF01555 DNA methylase DK885_RS02650 PF02954 Bacterial regulatory protein, Fis family DK885_RS02655 PF01207 Dihydrouridine synthase (Dus) DK885_RS02665 PF00474 Sodium:solute symporter family DK885_RS02670 PF06196 Protein of unknown function (DUF997) DK885_RS02675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DK885_RS02675 PF00289 Biotin carboxylase, N-terminal domain DK885_RS02675 PF02785 Biotin carboxylase C-terminal domain DK885_RS02680 PF00364 Biotin-requiring enzyme DK885_RS02690 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS02690 PF00107 Zinc-binding dehydrogenase DK885_RS02695 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS02695 PF00563 EAL domain DK885_RS02695 PF17157 Gammaproteobacterial periplasmic sensor domain DK885_RS02715 PF04085 rod shape-determining protein MreC DK885_RS02720 PF04093 rod shape-determining protein MreD DK885_RS02725 PF02545 Maf-like protein DK885_RS02730 PF10150 Ribonuclease E/G family DK885_RS02730 PF00575 S1 RNA binding domain DK885_RS02735 PF13116 Protein of unknown function DK885_RS02735 PF13502 AsmA-like C-terminal region DK885_RS02740 PF01523 Putative modulator of DNA gyrase DK885_RS02745 PF03466 LysR substrate binding domain DK885_RS02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS02750 PF07869 Protein of unknown function (DUF1656) DK885_RS02755 PF13533 Biotin-lipoyl like DK885_RS02760 PF04632 Fusaric acid resistance protein family DK885_RS02765 PF01337 Barstar (barnase inhibitor) DK885_RS02770 PF07338 Protein of unknown function (DUF1471) DK885_RS02775 PF02863 Arginine repressor, C-terminal domain DK885_RS02775 PF01316 Arginine repressor, DNA binding domain DK885_RS02780 PF00056 lactate/malate dehydrogenase, NAD binding domain DK885_RS02780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DK885_RS02785 PF13180 PDZ domain DK885_RS02790 PF13180 PDZ domain DK885_RS02790 PF00595 PDZ domain DK885_RS02795 PF06295 Protein of unknown function (DUF1043) DK885_RS02800 PF03969 AFG1-like ATPase DK885_RS02805 PF00572 Ribosomal protein L13 DK885_RS02810 PF00380 Ribosomal protein S9/S16 DK885_RS02820 PF02798 Glutathione S-transferase, N-terminal domain DK885_RS02820 PF00043 Glutathione S-transferase, C-terminal domain DK885_RS02825 PF04386 Stringent starvation protein B DK885_RS02830 PF03606 C4-dicarboxylate anaerobic carrier DK885_RS02840 PF07729 FCD domain DK885_RS02840 PF00392 Bacterial regulatory proteins, gntR family DK885_RS02845 PF00701 Dihydrodipicolinate synthetase family DK885_RS02850 PF07690 Major Facilitator Superfamily DK885_RS02855 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DK885_RS02860 PF00480 ROK family DK885_RS02865 PF04074 YhcH/YjgK/YiaL DK885_RS02870 PF06250 YhcG PDDEXK nuclease domain DK885_RS02870 PF17761 DUF1016 N-terminal domain DK885_RS02875 PF06551 Protein of unknown function (DUF1120) DK885_RS02885 PF01609 Transposase DDE domain DK885_RS02885 PF05598 Transposase domain (DUF772) DK885_RS02895 PF00577 Outer membrane usher protein DK885_RS02895 PF13953 PapC C-terminal domain DK885_RS02895 PF13954 PapC N-terminal domain DK885_RS02900 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS02905 PF06551 Protein of unknown function (DUF1120) DK885_RS02915 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS02915 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DK885_RS02920 PF00310 Glutamine amidotransferases class-II DK885_RS02920 PF04898 Glutamate synthase central domain DK885_RS02920 PF01493 GXGXG motif DK885_RS02920 PF01645 Conserved region in glutamate synthase DK885_RS02935 PF16199 Radical_SAM C-terminal domain DK885_RS02935 PF04055 Radical SAM superfamily DK885_RS02940 PF00989 PAS fold DK885_RS02940 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS02940 PF18415 Histidine kinase receptor ArcB trans-membrane domain DK885_RS02940 PF00072 Response regulator receiver domain DK885_RS02940 PF01627 Hpt domain DK885_RS02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS02960 PF00912 Transglycosylase DK885_RS02965 PF10707 PhoP regulatory network protein YrbL DK885_RS02970 PF00381 PTS HPr component phosphorylation site DK885_RS02975 PF03668 P-loop ATPase protein family DK885_RS02980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS02985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DK885_RS02990 PF04552 Sigma-54, DNA binding domain DK885_RS02990 PF00309 Sigma-54 factor, Activator interacting domain (AID) DK885_RS02990 PF04963 Sigma-54 factor, core binding domain DK885_RS02995 PF12399 Branched-chain amino acid ATP-binding cassette transporter DK885_RS02995 PF00005 ABC transporter DK885_RS03000 PF03968 OstA-like protein DK885_RS03005 PF06835 Lipopolysaccharide-assembly, LptC-related DK885_RS03015 PF01380 SIS domain DK885_RS03015 PF00571 CBS domain DK885_RS03020 PF01699 Sodium/calcium exchanger protein DK885_RS03025 PF00005 ABC transporter DK885_RS03030 PF02405 Permease MlaE DK885_RS03035 PF02470 MlaD protein DK885_RS03040 PF05494 MlaC protein DK885_RS03045 PF13466 STAS domain DK885_RS03050 PF01722 BolA-like protein DK885_RS03055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK885_RS03060 PF13693 Winged helix-turn-helix DNA-binding DK885_RS03065 PF00348 Polyprenyl synthetase DK885_RS03070 PF00829 Ribosomal prokaryotic L21 protein DK885_RS03075 PF01016 Ribosomal L27 protein DK885_RS03080 PF00892 EamA-like transporter family DK885_RS03085 PF01018 GTP1/OBG DK885_RS03085 PF01926 50S ribosome-binding GTPase DK885_RS03090 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DK885_RS03095 PF03449 Transcription elongation factor, N-terminal DK885_RS03095 PF01272 Transcription elongation factor, GreA/GreB, C-term DK885_RS03100 PF01985 CRS1 / YhbY (CRM) domain DK885_RS03105 PF01728 FtsJ-like methyltransferase DK885_RS03110 PF06480 FtsH Extracellular DK885_RS03110 PF01434 Peptidase family M41 DK885_RS03110 PF00004 ATPase family associated with various cellular activities (AAA) DK885_RS03110 PF17862 AAA+ lid domain DK885_RS03115 PF00809 Pterin binding enzyme DK885_RS03120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK885_RS03120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK885_RS03120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK885_RS03120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK885_RS03125 PF03840 Preprotein translocase SecG subunit DK885_RS03135 PF00884 Sulfatase DK885_RS03140 PF00764 Arginosuccinate synthase DK885_RS03150 PF17384 RimP C-terminal SH3 domain DK885_RS03150 PF02576 RimP N-terminal domain DK885_RS03155 PF13184 NusA-like KH domain DK885_RS03155 PF00575 S1 RNA binding domain DK885_RS03155 PF08529 NusA N-terminal domain DK885_RS03160 PF08364 Bacterial translation initiation factor IF-2 associated region DK885_RS03160 PF04760 Translation initiation factor IF-2, N-terminal region DK885_RS03160 PF00009 Elongation factor Tu GTP binding domain DK885_RS03160 PF11987 Translation-initiation factor 2 DK885_RS03165 PF02033 Ribosome-binding factor A DK885_RS03170 PF09157 Pseudouridine synthase II TruB, C-terminal DK885_RS03170 PF16198 tRNA pseudouridylate synthase B C-terminal domain DK885_RS03170 PF01509 TruB family pseudouridylate synthase (N terminal domain) DK885_RS03175 PF00312 Ribosomal protein S15 DK885_RS03180 PF00575 S1 RNA binding domain DK885_RS03180 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DK885_RS03180 PF00013 KH domain DK885_RS03180 PF03725 3' exoribonuclease family, domain 2 DK885_RS03180 PF01138 3' exoribonuclease family, domain 1 DK885_RS03185 PF13181 Tetratricopeptide repeat DK885_RS03185 PF07719 Tetratricopeptide repeat DK885_RS03195 PF03880 DbpA RNA binding domain DK885_RS03195 PF12343 Cold shock protein DEAD box A DK885_RS03195 PF00270 DEAD/DEAH box helicase DK885_RS03195 PF00271 Helicase conserved C-terminal domain DK885_RS03200 PF03222 Tryptophan/tyrosine permease family DK885_RS03205 PF00296 Luciferase-like monooxygenase DK885_RS03210 PF01136 Peptidase family U32 DK885_RS03215 PF01136 Peptidase family U32 DK885_RS03220 PF02036 SCP-2 sterol transfer family DK885_RS03225 PF13508 Acetyltransferase (GNAT) domain DK885_RS03230 PF01541 GIY-YIG catalytic domain DK885_RS03240 PF01965 DJ-1/PfpI family DK885_RS03245 PF13460 NAD(P)H-binding DK885_RS03250 PF03773 Predicted permease DK885_RS03255 PF04972 BON domain DK885_RS03260 PF13580 SIS domain DK885_RS03265 PF02021 Uncharacterised protein family UPF0102 DK885_RS03270 PF04348 LppC putative lipoprotein DK885_RS03275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DK885_RS03280 PF00419 Fimbrial protein DK885_RS03285 PF00577 Outer membrane usher protein DK885_RS03285 PF13954 PapC N-terminal domain DK885_RS03285 PF13953 PapC C-terminal domain DK885_RS03290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS03290 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS03295 PF00419 Fimbrial protein DK885_RS03300 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DK885_RS03305 PF03613 PTS system mannose/fructose/sorbose family IID component DK885_RS03310 PF03609 PTS system sorbose-specific iic component DK885_RS03315 PF03830 PTS system sorbose subfamily IIB component DK885_RS03320 PF01116 Fructose-bisphosphate aldolase class-II DK885_RS03325 PF01380 SIS domain DK885_RS03340 PF03830 PTS system sorbose subfamily IIB component DK885_RS03345 PF08013 Tagatose 6 phosphate kinase DK885_RS03355 PF08220 DeoR-like helix-turn-helix domain DK885_RS03355 PF00455 DeoR C terminal sensor domain DK885_RS03360 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system DK885_RS03365 PF15937 prlF antitoxin for toxin YhaV_toxin DK885_RS03370 PF08666 SAF domain DK885_RS03370 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DK885_RS03375 PF07690 Major Facilitator Superfamily DK885_RS03380 PF03328 HpcH/HpaI aldolase/citrate lyase family DK885_RS03385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DK885_RS03385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DK885_RS03390 PF02595 Glycerate kinase family DK885_RS03415 PF03466 LysR substrate binding domain DK885_RS03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS03425 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS03430 PF03222 Tryptophan/tyrosine permease family DK885_RS03435 PF00871 Acetokinase family DK885_RS03440 PF01228 Glycine radical DK885_RS03440 PF02901 Pyruvate formate lyase-like DK885_RS03445 PF01042 Endoribonuclease L-PSP DK885_RS03450 PF03313 Serine dehydratase alpha chain DK885_RS03450 PF03315 Serine dehydratase beta chain DK885_RS03465 PF03313 Serine dehydratase alpha chain DK885_RS03475 PF02678 Pirin DK885_RS03475 PF17954 Quercetinase C-terminal cupin domain DK885_RS03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS03480 PF03466 LysR substrate binding domain DK885_RS03490 PF05656 Protein of unknown function (DUF805) DK885_RS03495 PF05656 Protein of unknown function (DUF805) DK885_RS03500 PF13409 Glutathione S-transferase, N-terminal domain DK885_RS03505 PF07681 DoxX DK885_RS03510 PF13997 YqjK-like protein DK885_RS03515 PF07332 Putative Actinobacterial Holin-X, holin superfamily III DK885_RS03520 PF05957 Bacterial protein of unknown function (DUF883) DK885_RS03525 PF06476 Protein of unknown function (DUF1090) DK885_RS03530 PF13721 SecD export protein N-terminal TM region DK885_RS03535 PF09335 SNARE associated Golgi protein DK885_RS03540 PF07729 FCD domain DK885_RS03540 PF00392 Bacterial regulatory proteins, gntR family DK885_RS03545 PF07690 Major Facilitator Superfamily DK885_RS03550 PF02614 Glucuronate isomerase DK885_RS03555 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DK885_RS03555 PF08666 SAF domain DK885_RS03560 PF10688 Bacterial inner membrane protein DK885_RS03565 PF00375 Sodium:dicarboxylate symporter family DK885_RS03570 PF03741 Integral membrane protein TerC family DK885_RS03575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK885_RS03580 PF02698 DUF218 domain DK885_RS03585 PF01863 Protein of unknown function DUF45 DK885_RS03590 PF05175 Methyltransferase small domain DK885_RS03600 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system DK885_RS03605 PF01381 Helix-turn-helix DK885_RS03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS03610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DK885_RS03615 PF01204 Trehalase DK885_RS03625 PF13520 Amino acid permease DK885_RS03630 PF04074 YhcH/YjgK/YiaL DK885_RS03635 PF16353 Domain of unknown function(DUF4981) DK885_RS03635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DK885_RS03635 PF02837 Glycosyl hydrolases family 2, sugar binding domain DK885_RS03635 PF00703 Glycosyl hydrolases family 2 DK885_RS03635 PF02929 Beta galactosidase small chain DK885_RS03640 PF00356 Bacterial regulatory proteins, lacI family DK885_RS03650 PF01588 Putative tRNA binding domain DK885_RS03655 PF00202 Aminotransferase class-III DK885_RS03665 PF08447 PAS fold DK885_RS03665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DK885_RS03670 PF03551 Transcriptional regulator PadR-like family DK885_RS03675 PF08021 Siderophore-interacting FAD-binding domain DK885_RS03675 PF04954 Siderophore-interacting protein DK885_RS03685 PF03167 Uracil DNA glycosylase superfamily DK885_RS03690 PF04546 Sigma-70, non-essential region DK885_RS03690 PF00140 Sigma-70 factor, region 1.2 DK885_RS03690 PF04542 Sigma-70 region 2 DK885_RS03690 PF04539 Sigma-70 region 3 DK885_RS03690 PF04545 Sigma-70, region 4 DK885_RS03690 PF03979 Sigma-70 factor, region 1.1 DK885_RS03700 PF08275 DNA primase catalytic core, N-terminal domain DK885_RS03700 PF08278 DNA primase DnaG DnaB-binding DK885_RS03700 PF01807 CHC2 zinc finger DK885_RS03700 PF10410 DnaB-helicase binding domain of primase DK885_RS03705 PF01165 Ribosomal protein S21 DK885_RS03715 PF00814 Glycoprotease family DK885_RS03720 PF00939 Sodium:sulfate symporter transmembrane region DK885_RS03730 PF05681 Fumarate hydratase (Fumerase) DK885_RS03740 PF03466 LysR substrate binding domain DK885_RS03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS03745 PF02660 Glycerol-3-phosphate acyltransferase DK885_RS03750 PF02152 Dihydroneopterin aldolase DK885_RS03755 PF02673 Bacitracin resistance protein BacA DK885_RS03760 PF01966 HD domain DK885_RS03760 PF12627 Probable RNA and SrmB- binding site of polymerase A DK885_RS03760 PF01743 Poly A polymerase head domain DK885_RS03765 PF08239 Bacterial SH3 domain DK885_RS03775 PF01928 CYTH domain DK885_RS03780 PF03710 Glutamate-ammonia ligase adenylyltransferase DK885_RS03780 PF08335 GlnD PII-uridylyltransferase DK885_RS03785 PF00294 pfkB family carbohydrate kinase DK885_RS03785 PF01467 Cytidylyltransferase-like DK885_RS03805 PF15975 Flotillin DK885_RS03805 PF01145 SPFH domain / Band 7 family DK885_RS03810 PF07290 Protein of unknown function (DUF1449) DK885_RS03815 PF08971 Glycogen synthesis protein DK885_RS03825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS03825 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS03830 PF13953 PapC C-terminal domain DK885_RS03830 PF13954 PapC N-terminal domain DK885_RS03830 PF00577 Outer membrane usher protein DK885_RS03850 PF00419 Fimbrial protein DK885_RS03855 PF04380 Membrane fusogenic activity DK885_RS03860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DK885_RS03870 PF02535 ZIP Zinc transporter DK885_RS03875 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DK885_RS03880 PF03738 Glutathionylspermidine synthase preATP-grasp DK885_RS03885 PF06693 Protein of unknown function (DUF1190) DK885_RS03895 PF02321 Outer membrane efflux protein DK885_RS03900 PF00293 NUDIX domain DK885_RS03905 PF06853 Protein of unknown function (DUF1249) DK885_RS03910 PF00149 Calcineurin-like phosphoesterase DK885_RS03915 PF05728 Uncharacterised protein family (UPF0227) DK885_RS03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS03920 PF00986 DNA gyrase B subunit, carboxyl terminus DK885_RS03920 PF00204 DNA gyrase B DK885_RS03920 PF01751 Toprim domain DK885_RS03925 PF03992 Antibiotic biosynthesis monooxygenase DK885_RS03930 PF02525 Flavodoxin-like fold DK885_RS03940 PF10840 Protein of unknown function (DUF2645) DK885_RS03945 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS03945 PF08521 Two-component sensor kinase N-terminal DK885_RS03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS03950 PF00072 Response regulator receiver domain DK885_RS03950 PF00486 Transcriptional regulatory protein, C terminal DK885_RS03955 PF04076 Bacterial OB fold (BOF) protein DK885_RS03960 PF06445 GyrI-like small molecule binding domain DK885_RS03965 PF15723 Motility quorum-sensing regulator, toxin of MqsA DK885_RS03970 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA DK885_RS03980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS03985 PF03989 DNA gyrase C-terminal domain, beta-propeller DK885_RS03985 PF00521 DNA gyrase/topoisomerase IV, subunit A DK885_RS03990 PF01553 Acyltransferase DK885_RS03995 PF00394 Multicopper oxidase DK885_RS03995 PF07732 Multicopper oxidase DK885_RS03995 PF07731 Multicopper oxidase DK885_RS04000 PF08497 Radical SAM N-terminal DK885_RS04000 PF04055 Radical SAM superfamily DK885_RS04000 PF11842 Domain of unknown function (DUF3362) DK885_RS04005 PF04728 Lipoprotein leucine-zipper DK885_RS04010 PF12883 Protein of unknown function (DUF3828) DK885_RS04015 PF00248 Aldo/keto reductase family DK885_RS04020 PF00465 Iron-containing alcohol dehydrogenase DK885_RS04025 PF06719 AraC-type transcriptional regulator N-terminus DK885_RS04025 PF12833 Helix-turn-helix domain DK885_RS04030 PF09335 SNARE associated Golgi protein DK885_RS04035 PF01053 Cys/Met metabolism PLP-dependent enzyme DK885_RS04045 PF01618 MotA/TolQ/ExbB proton channel family DK885_RS04050 PF02472 Biopolymer transport protein ExbD/TolR DK885_RS04060 PF03350 Uncharacterized protein family, UPF0114 DK885_RS04065 PF00248 Aldo/keto reductase family DK885_RS04080 PF11115 Protein of unknown function (DUF2623) DK885_RS04090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DK885_RS04090 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DK885_RS04095 PF13247 4Fe-4S dicluster domain DK885_RS04100 PF03916 Polysulphide reductase, NrfD DK885_RS04105 PF00374 Nickel-dependent hydrogenase DK885_RS04110 PF01750 Hydrogenase maturation protease DK885_RS04115 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DK885_RS04120 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DK885_RS04125 PF01455 HupF/HypC family DK885_RS04130 PF02798 Glutathione S-transferase, N-terminal domain DK885_RS04135 PF05257 CHAP domain DK885_RS04135 PF03738 Glutathionylspermidine synthase preATP-grasp DK885_RS04140 PF01384 Phosphate transporter family DK885_RS04160 PF01943 Polysaccharide biosynthesis protein DK885_RS04165 PF05598 Transposase domain (DUF772) DK885_RS04165 PF01609 Transposase DDE domain DK885_RS04175 PF00392 Bacterial regulatory proteins, gntR family DK885_RS04175 PF07729 FCD domain DK885_RS04180 PF01565 FAD binding domain DK885_RS04180 PF02913 FAD linked oxidases, C-terminal domain DK885_RS04185 PF01565 FAD binding domain DK885_RS04190 PF13183 4Fe-4S dicluster domain DK885_RS04190 PF02754 Cysteine-rich domain DK885_RS04195 PF03928 Haem-degrading DK885_RS04200 PF01274 Malate synthase DK885_RS04205 PF02652 L-lactate permease DK885_RS04215 PF13322 Domain of unknown function (DUF4092) DK885_RS04215 PF17291 N-terminal domain of M60-like peptidases DK885_RS04215 PF13402 Peptidase M60, enhancin and enhancin-like DK885_RS04220 PF01478 Type IV leader peptidase family DK885_RS04220 PF06750 Bacterial Peptidase A24 N-terminal domain DK885_RS04225 PF16549 Type II secretion system (T2SS) pilotin, S protein DK885_RS04230 PF11356 Type II secretion system protein C DK885_RS04240 PF04612 Type II secretion system (T2SS), protein M DK885_RS04250 PF04474 Protein of unknown function (DUF554) DK885_RS04260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DK885_RS04260 PF01276 Orn/Lys/Arg decarboxylase, major domain DK885_RS04260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DK885_RS04265 PF03825 Nucleoside H+ symporter DK885_RS04270 PF01464 Transglycosylase SLT domain DK885_RS04270 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DK885_RS04275 PF04362 Bacterial Fe(2+) trafficking DK885_RS04280 PF00730 HhH-GPD superfamily base excision DNA repair protein DK885_RS04280 PF00633 Helix-hairpin-helix motif DK885_RS04280 PF10576 Iron-sulfur binding domain of endonuclease III DK885_RS04280 PF14815 NUDIX domain DK885_RS04290 PF02390 Putative methyltransferase DK885_RS04295 PF04320 Protein with unknown function (DUF469) DK885_RS04300 PF11101 Protein of unknown function (DUF2884) DK885_RS04305 PF17763 Glutaminase/Asparaginase C-terminal domain DK885_RS04305 PF00710 Asparaginase, N-terminal DK885_RS04310 PF06717 Protein of unknown function (DUF1202) DK885_RS04315 PF06969 HemN C-terminal domain DK885_RS04315 PF04055 Radical SAM superfamily DK885_RS04320 PF01725 Ham1 family DK885_RS04325 PF02594 Uncharacterised ACR, YggU family COG1872 DK885_RS04330 PF02325 YGGT family DK885_RS04335 PF01168 Alanine racemase, N-terminal domain DK885_RS04340 PF00437 Type II/IV secretion system protein DK885_RS04345 PF03652 Holliday junction resolvase DK885_RS04350 PF02622 Uncharacterized ACR, COG1678 DK885_RS04355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DK885_RS04355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DK885_RS04360 PF04452 RNA methyltransferase DK885_RS04365 PF04231 Endonuclease I DK885_RS04370 PF10263 SprT-like family DK885_RS04370 PF17283 SprT-like zinc ribbon domain DK885_RS04375 PF00083 Sugar (and other) transporter DK885_RS04380 PF00438 S-adenosylmethionine synthetase, N-terminal domain DK885_RS04380 PF02772 S-adenosylmethionine synthetase, central domain DK885_RS04380 PF02773 S-adenosylmethionine synthetase, C-terminal domain DK885_RS04390 PF17430 Uncharacterized YqgC-like DK885_RS04395 PF11036 Virulence promoting factor DK885_RS04400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DK885_RS04400 PF17944 Arginine decarboxylase C-terminal helical extension DK885_RS04400 PF17810 Arginine decarboxylase helical bundle domain DK885_RS04405 PF00491 Arginase family DK885_RS04410 PF01435 Peptidase family M48 DK885_RS04415 PF02779 Transketolase, pyrimidine binding domain DK885_RS04415 PF02780 Transketolase, C-terminal domain DK885_RS04415 PF00456 Transketolase, thiamine diphosphate binding domain DK885_RS04420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS04425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS04425 PF02378 Phosphotransferase system, EIIC DK885_RS04430 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS04430 PF00107 Zinc-binding dehydrogenase DK885_RS04435 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DK885_RS04440 PF05068 Mannitol repressor DK885_RS04455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DK885_RS04455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DK885_RS04460 PF00162 Phosphoglycerate kinase DK885_RS04465 PF01116 Fructose-bisphosphate aldolase class-II DK885_RS04475 PF05552 Conserved TM helix DK885_RS04475 PF00924 Mechanosensitive ion channel DK885_RS04480 PF01810 LysE type translocator DK885_RS04485 PF04402 Protein of unknown function (DUF541) DK885_RS04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS04490 PF03466 LysR substrate binding domain DK885_RS04495 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DK885_RS04495 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DK885_RS04500 PF00378 Enoyl-CoA hydratase/isomerase DK885_RS04510 PF02310 B12 binding domain DK885_RS04510 PF01642 Methylmalonyl-CoA mutase DK885_RS04515 PF03466 LysR substrate binding domain DK885_RS04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS04520 PF03466 LysR substrate binding domain DK885_RS04525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DK885_RS04530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DK885_RS04530 PF01842 ACT domain DK885_RS04530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DK885_RS04540 PF01812 5-formyltetrahydrofolate cyclo-ligase family DK885_RS04550 PF05164 Cell division protein ZapA DK885_RS04560 PF03695 Uncharacterised protein family (UPF0149) DK885_RS04565 PF00557 Metallopeptidase family M24 DK885_RS04565 PF05195 Aminopeptidase P, N-terminal domain DK885_RS04570 PF01494 FAD binding domain DK885_RS04575 PF01494 FAD binding domain DK885_RS04580 PF08669 Glycine cleavage T-protein C-terminal barrel domain DK885_RS04580 PF01571 Aminomethyltransferase folate-binding domain DK885_RS04585 PF01597 Glycine cleavage H-protein DK885_RS04590 PF02347 Glycine cleavage system P-protein DK885_RS04600 PF00232 Glycosyl hydrolase family 1 DK885_RS04605 PF04266 ASCH domain DK885_RS04610 PF03006 Haemolysin-III related DK885_RS04615 PF01571 Aminomethyltransferase folate-binding domain DK885_RS04620 PF03937 Flavinator of succinate dehydrogenase DK885_RS04625 PF07254 Membrane-bound toxin component of toxin-antitoxin system DK885_RS04630 PF00258 Flavodoxin DK885_RS04635 PF02899 Phage integrase, N-terminal SAM-like domain DK885_RS04635 PF00589 Phage integrase family DK885_RS04640 PF10411 Disulfide bond isomerase protein N-terminus DK885_RS04640 PF13098 Thioredoxin-like domain DK885_RS04645 PF17768 RecJ OB domain DK885_RS04645 PF02272 DHHA1 domain DK885_RS04645 PF01368 DHH family DK885_RS04655 PF01336 OB-fold nucleic acid binding domain DK885_RS04655 PF00152 tRNA synthetases class II (D, K and N) DK885_RS04660 PF00293 NUDIX domain DK885_RS04670 PF00860 Permease family DK885_RS04680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DK885_RS04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS04680 PF13247 4Fe-4S dicluster domain DK885_RS04685 PF13247 4Fe-4S dicluster domain DK885_RS04690 PF00860 Permease family DK885_RS04695 PF01979 Amidohydrolase family DK885_RS04700 PF00860 Permease family DK885_RS04705 PF01799 [2Fe-2S] binding domain DK885_RS04705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DK885_RS04705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DK885_RS04710 PF00941 FAD binding domain in molybdopterin dehydrogenase DK885_RS04715 PF01979 Amidohydrolase family DK885_RS04720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DK885_RS04720 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS04725 PF12804 MobA-like NTP transferase domain DK885_RS04735 PF02625 XdhC and CoxI family DK885_RS04735 PF13478 XdhC Rossmann domain DK885_RS04740 PF00696 Amino acid kinase family DK885_RS04745 PF01979 Amidohydrolase family DK885_RS04750 PF07687 Peptidase dimerisation domain DK885_RS04750 PF01546 Peptidase family M20/M25/M40 DK885_RS04755 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS04760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK885_RS04760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK885_RS04765 PF00158 Sigma-54 interaction domain DK885_RS04765 PF13188 PAS domain DK885_RS04765 PF02954 Bacterial regulatory protein, Fis family DK885_RS04770 PF01799 [2Fe-2S] binding domain DK885_RS04770 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS04775 PF00941 FAD binding domain in molybdopterin dehydrogenase DK885_RS04775 PF03450 CO dehydrogenase flavoprotein C-terminal domain DK885_RS04780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DK885_RS04780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DK885_RS04790 PF01551 Peptidase family M23 DK885_RS04790 PF01476 LysM domain DK885_RS04830 PF00072 Response regulator receiver domain DK885_RS04830 PF00196 Bacterial regulatory proteins, luxR family DK885_RS04835 PF00072 Response regulator receiver domain DK885_RS04835 PF00196 Bacterial regulatory proteins, luxR family DK885_RS04840 PF01464 Transglycosylase SLT domain DK885_RS04850 PF00486 Transcriptional regulatory protein, C terminal DK885_RS04855 PF07720 Tetratricopeptide repeat DK885_RS04880 PF00486 Transcriptional regulatory protein, C terminal DK885_RS04885 PF00196 Bacterial regulatory proteins, luxR family DK885_RS04890 PF03222 Tryptophan/tyrosine permease family DK885_RS04895 PF00108 Thiolase, N-terminal domain DK885_RS04895 PF02803 Thiolase, C-terminal domain DK885_RS04900 PF04962 KduI/IolB family DK885_RS04910 PF00083 Sugar (and other) transporter DK885_RS04915 PF01177 Asp/Glu/Hydantoin racemase DK885_RS04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS04920 PF03466 LysR substrate binding domain DK885_RS04925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DK885_RS04925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DK885_RS04930 PF00356 Bacterial regulatory proteins, lacI family DK885_RS04935 PF00501 AMP-binding enzyme DK885_RS04935 PF01553 Acyltransferase DK885_RS04940 PF07690 Major Facilitator Superfamily DK885_RS04945 PF00248 Aldo/keto reductase family DK885_RS04950 PF06004 Bacterial protein of unknown function (DUF903) DK885_RS04955 PF03741 Integral membrane protein TerC family DK885_RS04960 PF02976 DNA mismatch repair enzyme MutH DK885_RS04965 PF00293 NUDIX domain DK885_RS04970 PF01590 GAF domain DK885_RS04970 PF00391 PEP-utilising enzyme, mobile domain DK885_RS04970 PF05524 PEP-utilising enzyme, N-terminal DK885_RS04970 PF02896 PEP-utilising enzyme, TIM barrel domain DK885_RS04975 PF01790 Prolipoprotein diacylglyceryl transferase DK885_RS04980 PF00303 Thymidylate synthase DK885_RS04985 PF07963 Prokaryotic N-terminal methylation motif DK885_RS04990 PF07963 Prokaryotic N-terminal methylation motif DK885_RS04995 PF10713 Protein of unknown function (DUF2509) DK885_RS05000 PF07963 Prokaryotic N-terminal methylation motif DK885_RS05000 PF12528 Type II secretion prepilin peptidase dependent protein C DK885_RS05005 PF17946 RecC C-terminal domain DK885_RS05010 PF16187 Middle or third domain of peptidase_M16 DK885_RS05010 PF05193 Peptidase M16 inactive domain DK885_RS05010 PF00675 Insulinase (Peptidase family M16) DK885_RS05015 PF13361 UvrD-like helicase C-terminal domain DK885_RS05015 PF00580 UvrD/REP helicase N-terminal domain DK885_RS05015 PF12705 PD-(D/E)XK nuclease superfamily DK885_RS05020 PF13538 UvrD-like helicase C-terminal domain DK885_RS05025 PF00696 Amino acid kinase family DK885_RS05025 PF00583 Acetyltransferase (GNAT) family DK885_RS05035 PF11741 AMIN domain DK885_RS05035 PF01520 N-acetylmuramoyl-L-alanine amidase DK885_RS05060 PF06725 3D domain DK885_RS05060 PF03562 MltA specific insert domain DK885_RS05065 PF00899 ThiF family DK885_RS05070 PF02657 Fe-S metabolism associated domain DK885_RS05075 PF00266 Aminotransferase class-V DK885_RS05080 PF06004 Bacterial protein of unknown function (DUF903) DK885_RS05085 PF03466 LysR substrate binding domain DK885_RS05085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS05090 PF04241 Protein of unknown function (DUF423) DK885_RS05095 PF18125 RlmM ferredoxin-like domain DK885_RS05095 PF01728 FtsJ-like methyltransferase DK885_RS05100 PF08220 DeoR-like helix-turn-helix domain DK885_RS05100 PF00455 DeoR C terminal sensor domain DK885_RS05105 PF05025 RbsD / FucU transport protein family DK885_RS05110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK885_RS05110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS05115 PF07881 L-fucose isomerase, first N-terminal domain DK885_RS05115 PF07882 L-fucose isomerase, second N-terminal domain DK885_RS05115 PF02952 L-fucose isomerase, C-terminal domain DK885_RS05120 PF07690 Major Facilitator Superfamily DK885_RS05125 PF00596 Class II Aldolase and Adducin N-terminal domain DK885_RS05130 PF00465 Iron-containing alcohol dehydrogenase DK885_RS05135 PF01367 5'-3' exonuclease, C-terminal SAM fold DK885_RS05135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DK885_RS05140 PF03315 Serine dehydratase beta chain DK885_RS05140 PF03313 Serine dehydratase alpha chain DK885_RS05150 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DK885_RS05150 PF03641 Possible lysine decarboxylase DK885_RS05150 PF11892 Domain of unknown function (DUF3412) DK885_RS05155 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DK885_RS05155 PF14489 QueF-like protein DK885_RS05160 PF07348 Syd protein (SUKH-2) DK885_RS05165 PF04287 tRNA pseudouridine synthase C DK885_RS05170 PF00849 RNA pseudouridylate synthase DK885_RS05175 PF00258 Flavodoxin DK885_RS05180 PF07690 Major Facilitator Superfamily DK885_RS05185 PF13378 Enolase C-terminal domain-like DK885_RS05185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DK885_RS05190 PF13378 Enolase C-terminal domain-like DK885_RS05195 PF01627 Hpt domain DK885_RS05195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DK885_RS05195 PF00672 HAMP domain DK885_RS05195 PF00072 Response regulator receiver domain DK885_RS05195 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS05200 PF05958 tRNA (Uracil-5-)-methyltransferase DK885_RS05200 PF01938 TRAM domain DK885_RS05205 PF02824 TGS domain DK885_RS05205 PF13291 ACT domain DK885_RS05205 PF04607 Region found in RelA / SpoT proteins DK885_RS05210 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DK885_RS05215 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DK885_RS05220 PF03819 MazG nucleotide pyrophosphohydrolase domain DK885_RS05225 PF06418 CTP synthase N-terminus DK885_RS05225 PF00117 Glutamine amidotransferase class-I DK885_RS05230 PF00113 Enolase, C-terminal TIM barrel domain DK885_RS05230 PF03952 Enolase, N-terminal domain DK885_RS05235 PF04536 TPM domain DK885_RS05245 PF04055 Radical SAM superfamily DK885_RS05250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK885_RS05250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS05255 PF07690 Major Facilitator Superfamily DK885_RS05265 PF01565 FAD binding domain DK885_RS05265 PF02913 FAD linked oxidases, C-terminal domain DK885_RS05270 PF00083 Sugar (and other) transporter DK885_RS05275 PF01012 Electron transfer flavoprotein domain DK885_RS05280 PF01012 Electron transfer flavoprotein domain DK885_RS05280 PF00766 Electron transfer flavoprotein FAD-binding domain DK885_RS05285 PF04309 Glycerol-3-phosphate responsive antiterminator DK885_RS05295 PF01266 FAD dependent oxidoreductase DK885_RS05300 PF01242 6-pyruvoyl tetrahydropterin synthase DK885_RS05305 PF00175 Oxidoreductase NAD-binding domain DK885_RS05305 PF00258 Flavodoxin DK885_RS05305 PF00667 FAD binding domain DK885_RS05310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DK885_RS05310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DK885_RS05315 PF01507 Phosphoadenosine phosphosulfate reductase family DK885_RS05325 PF00271 Helicase conserved C-terminal domain DK885_RS05325 PF00270 DEAD/DEAH box helicase DK885_RS05325 PF18019 HD domain DK885_RS05330 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) DK885_RS05335 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) DK885_RS05340 PF09344 CT1975-like protein DK885_RS05345 PF09704 CRISPR-associated protein (Cas_Cas5) DK885_RS05350 PF08798 CRISPR associated protein DK885_RS05355 PF01867 CRISPR associated protein Cas1 DK885_RS05360 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) DK885_RS05365 PF04389 Peptidase family M28 DK885_RS05370 PF01507 Phosphoadenosine phosphosulfate reductase family DK885_RS05375 PF00009 Elongation factor Tu GTP binding domain DK885_RS05385 PF12084 Protein of unknown function (DUF3561) DK885_RS05390 PF04977 Septum formation initiator DK885_RS05395 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DK885_RS05400 PF02542 YgbB family DK885_RS05405 PF01142 tRNA pseudouridine synthase D (TruD) DK885_RS05410 PF01975 Survival protein SurE DK885_RS05420 PF01551 Peptidase family M23 DK885_RS05420 PF01476 LysM domain DK885_RS05425 PF04539 Sigma-70 region 3 DK885_RS05425 PF04545 Sigma-70, region 4 DK885_RS05425 PF04542 Sigma-70 region 2 DK885_RS05425 PF00140 Sigma-70 factor, region 1.2 DK885_RS05430 PF02447 GntP family permease DK885_RS05435 PF01261 Xylose isomerase-like TIM barrel DK885_RS05440 PF00596 Class II Aldolase and Adducin N-terminal domain DK885_RS05445 PF17042 Nucleotide-binding C-terminal domain DK885_RS05445 PF07005 Sugar-binding N-terminal domain DK885_RS05450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DK885_RS05450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DK885_RS05455 PF08220 DeoR-like helix-turn-helix domain DK885_RS05455 PF00455 DeoR C terminal sensor domain DK885_RS05460 PF00149 Calcineurin-like phosphoesterase DK885_RS05465 PF01624 MutS domain I DK885_RS05465 PF05192 MutS domain III DK885_RS05465 PF05190 MutS family domain IV DK885_RS05465 PF00488 MutS domain V DK885_RS05465 PF05188 MutS domain II DK885_RS05470 PF11756 Nitrous oxide-stimulated promoter DK885_RS05475 PF01590 GAF domain DK885_RS05475 PF00158 Sigma-54 interaction domain DK885_RS05480 PF02769 AIR synthase related protein, C-terminal domain DK885_RS05480 PF00586 AIR synthase related protein, N-terminal domain DK885_RS05485 PF01924 Hydrogenase formation hypA family DK885_RS05490 PF01455 HupF/HypC family DK885_RS05495 PF02492 CobW/HypB/UreG, nucleotide-binding domain DK885_RS05500 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DK885_RS05505 PF11046 Transcriptional repressor of hyc and hyp operons DK885_RS05510 PF13247 4Fe-4S dicluster domain DK885_RS05515 PF00361 Proton-conducting membrane transporter DK885_RS05520 PF00146 NADH dehydrogenase DK885_RS05525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DK885_RS05525 PF00374 Nickel-dependent hydrogenase DK885_RS05525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DK885_RS05530 PF12838 4Fe-4S dicluster domain DK885_RS05535 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DK885_RS05540 PF07450 Formate hydrogenlyase maturation protein HycH DK885_RS05545 PF01750 Hydrogenase maturation protease DK885_RS05550 PF00232 Glycosyl hydrolase family 1 DK885_RS05555 PF02378 Phosphotransferase system, EIIC DK885_RS05555 PF00367 phosphotransferase system, EIIB DK885_RS05560 PF00356 Bacterial regulatory proteins, lacI family DK885_RS05565 PF13247 4Fe-4S dicluster domain DK885_RS05565 PF12800 4Fe-4S binding domain DK885_RS05570 PF01300 Telomere recombination DK885_RS05570 PF17788 HypF Kae1-like domain DK885_RS05570 PF00708 Acylphosphatase DK885_RS05570 PF07503 HypF finger DK885_RS05575 PF18113 Rubredoxin binding C-terminal domain DK885_RS05575 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS05580 PF00301 Rubredoxin DK885_RS05580 PF00258 Flavodoxin DK885_RS05580 PF00753 Metallo-beta-lactamase superfamily DK885_RS05585 PF01590 GAF domain DK885_RS05585 PF00158 Sigma-54 interaction domain DK885_RS05590 PF01380 SIS domain DK885_RS05590 PF00571 CBS domain DK885_RS05595 PF08220 DeoR-like helix-turn-helix domain DK885_RS05595 PF00455 DeoR C terminal sensor domain DK885_RS05600 PF06923 Glucitol operon activator protein (GutM) DK885_RS05605 PF00106 short chain dehydrogenase DK885_RS05610 PF03829 PTS system glucitol/sorbitol-specific IIA component DK885_RS05615 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DK885_RS05615 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DK885_RS05620 PF03608 PTS system enzyme II sorbitol-specific factor DK885_RS05625 PF13406 Transglycosylase SLT domain DK885_RS05630 PF02464 Competence-damaged protein DK885_RS05635 PF00154 recA bacterial DNA recombination protein DK885_RS05640 PF02631 RecX family DK885_RS05645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DK885_RS05645 PF02272 DHHA1 domain DK885_RS05645 PF01411 tRNA synthetases class II (A) DK885_RS05650 PF02599 Global regulator protein family DK885_RS05680 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS05685 PF09335 SNARE associated Golgi protein DK885_RS05690 PF04262 Glutamate-cysteine ligase DK885_RS05695 PF02664 S-Ribosylhomocysteinase (LuxS) DK885_RS05700 PF07690 Major Facilitator Superfamily DK885_RS05705 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS05705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS05710 PF01047 MarR family DK885_RS05715 PF05437 Branched-chain amino acid transport protein (AzlD) DK885_RS05720 PF03591 AzlC protein DK885_RS05730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DK885_RS05735 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS05740 PF00571 CBS domain DK885_RS05740 PF00005 ABC transporter DK885_RS05750 PF00268 Ribonucleotide reductase, small chain DK885_RS05755 PF00317 Ribonucleotide reductase, all-alpha domain DK885_RS05755 PF08343 Ribonucleotide reductase N-terminal DK885_RS05755 PF02867 Ribonucleotide reductase, barrel domain DK885_RS05760 PF07972 NrdI Flavodoxin like DK885_RS05765 PF00462 Glutaredoxin DK885_RS05770 PF05957 Bacterial protein of unknown function (DUF883) DK885_RS05775 PF09400 Protein of unknown function (DUF2002) DK885_RS05780 PF06610 L-alanine exporter DK885_RS05785 PF00816 H-NS histone family DK885_RS05790 PF11127 Protein of unknown function (DUF2892) DK885_RS05790 PF00581 Rhodanese-like domain DK885_RS05795 PF01022 Bacterial regulatory protein, arsR family DK885_RS05800 PF01679 Proteolipid membrane potential modulator DK885_RS05805 PF01476 LysM domain DK885_RS05805 PF04972 BON domain DK885_RS05810 PF00392 Bacterial regulatory proteins, gntR family DK885_RS05810 PF07729 FCD domain DK885_RS05815 PF00324 Amino acid permease DK885_RS05820 PF00202 Aminotransferase class-III DK885_RS05825 PF00171 Aldehyde dehydrogenase family DK885_RS05830 PF01266 FAD dependent oxidoreductase DK885_RS05835 PF08943 CsiD DK885_RS05850 PF17612 Family of unknown function (DUF5507) DK885_RS05855 PF17621 Family of unknown function (DUF5508) DK885_RS05875 PF03212 Pertactin DK885_RS05875 PF03797 Autotransporter beta-domain DK885_RS05875 PF16168 Adhesin of bacterial autotransporter system, probable stalk DK885_RS05880 PF06755 CbtA_toxin of type IV toxin-antitoxin system DK885_RS05885 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A DK885_RS05890 PF06174 Protein of unknown function (DUF987) DK885_RS05895 PF04002 RadC-like JAB domain DK885_RS05900 PF03230 Antirestriction protein DK885_RS05940 PF13280 WYL domain DK885_RS05940 PF08220 DeoR-like helix-turn-helix domain DK885_RS05945 PF06067 Domain of unknown function (DUF932) DK885_RS05950 PF01926 50S ribosome-binding GTPase DK885_RS05955 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA DK885_RS05960 PF15935 RNase LS, bacterial toxin DK885_RS05965 PF07510 Protein of unknown function (DUF1524) DK885_RS05970 PF08878 Domain of unknown function (DUF1837) DK885_RS05970 PF14130 Domain of unknown function (DUF4297) DK885_RS05975 PF00271 Helicase conserved C-terminal domain DK885_RS05985 PF13148 Protein of unknown function (DUF3987) DK885_RS05990 PF05930 Prophage CP4-57 regulatory protein (AlpA) DK885_RS06000 PF00589 Phage integrase family DK885_RS06000 PF13356 Arm DNA-binding domain DK885_RS06010 PF01668 SmpB protein DK885_RS06015 PF03364 Polyketide cyclase / dehydrase and lipid transport DK885_RS06020 PF03658 RnfH family Ubiquitin DK885_RS06025 PF04355 SmpA / OmlA family DK885_RS06030 PF02463 RecF/RecN/SMC N terminal domain DK885_RS06035 PF01513 ATP-NAD kinase DK885_RS06045 PF01025 GrpE DK885_RS06050 PF00571 CBS domain DK885_RS06050 PF01595 Cyclin M transmembrane N-terminal domain DK885_RS06050 PF03471 Transporter associated domain DK885_RS06055 PF01578 Cytochrome C assembly protein DK885_RS06060 PF02881 SRP54-type protein, helical bundle domain DK885_RS06060 PF02978 Signal peptide binding domain DK885_RS06060 PF00448 SRP54-type protein, GTPase domain DK885_RS06065 PF00886 Ribosomal protein S16 DK885_RS06070 PF01782 RimM N-terminal domain DK885_RS06070 PF05239 PRC-barrel domain DK885_RS06075 PF01746 tRNA (Guanine-1)-methyltransferase DK885_RS06080 PF01245 Ribosomal protein L19 DK885_RS06085 PF00691 OmpA family DK885_RS06090 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS06090 PF17152 Periplasmic sensor domain DK885_RS06095 PF13689 YfiR/HmsC-like DK885_RS06100 PF10973 Protein of unknown function (DUF2799) DK885_RS06105 PF00793 DAHP synthetase I family DK885_RS06110 PF02153 Prephenate dehydrogenase DK885_RS06110 PF01817 Chorismate mutase type II DK885_RS06115 PF01817 Chorismate mutase type II DK885_RS06115 PF00800 Prephenate dehydratase DK885_RS06125 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DK885_RS06135 PF13525 Outer membrane lipoprotein DK885_RS06140 PF01479 S4 domain DK885_RS06140 PF00849 RNA pseudouridylate synthase DK885_RS06145 PF02578 Multi-copper polyphenol oxidoreductase laccase DK885_RS06150 PF17871 AAA lid domain DK885_RS06150 PF07724 AAA domain (Cdc48 subfamily) DK885_RS06150 PF02861 Clp amino terminal domain, pathogenicity island component DK885_RS06150 PF10431 C-terminal, D2-small domain, of ClpB protein DK885_RS06150 PF00004 ATPase family associated with various cellular activities (AAA) DK885_RS06180 PF00083 Sugar (and other) transporter DK885_RS06185 PF10043 Predicted periplasmic lipoprotein (DUF2279) DK885_RS06190 PF13091 PLD-like domain DK885_RS06195 PF13607 Succinyl-CoA ligase like flavodoxin domain DK885_RS06195 PF00583 Acetyltransferase (GNAT) family DK885_RS06195 PF13380 CoA binding domain DK885_RS06200 PF03942 DTW domain DK885_RS06205 PF00085 Thioredoxin DK885_RS06215 PF00588 SpoU rRNA Methylase family DK885_RS06215 PF08032 RNA 2'-O ribose methyltransferase substrate binding DK885_RS06220 PF03167 Uracil DNA glycosylase superfamily DK885_RS06225 PF01228 Glycine radical DK885_RS06230 PF01810 LysE type translocator DK885_RS06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS06235 PF03466 LysR substrate binding domain DK885_RS06240 PF00271 Helicase conserved C-terminal domain DK885_RS06240 PF00270 DEAD/DEAH box helicase DK885_RS06245 PF05175 Methyltransferase small domain DK885_RS06250 PF02910 Fumarate reductase flavoprotein C-term DK885_RS06250 PF00890 FAD binding domain DK885_RS06255 PF08281 Sigma-70, region 4 DK885_RS06255 PF04542 Sigma-70 region 2 DK885_RS06260 PF03872 Anti sigma-E protein RseA, N-terminal domain DK885_RS06260 PF03873 Anti sigma-E protein RseA, C-terminal domain DK885_RS06265 PF03888 MucB/RseB N-terminal domain DK885_RS06265 PF17188 MucB/RseB C-terminal domain DK885_RS06275 PF03144 Elongation factor Tu domain 2 DK885_RS06275 PF00679 Elongation factor G C-terminus DK885_RS06275 PF00009 Elongation factor Tu GTP binding domain DK885_RS06275 PF06421 GTP-binding protein LepA C-terminus DK885_RS06280 PF10502 Signal peptidase, peptidase S26 DK885_RS06290 PF00035 Double-stranded RNA binding motif DK885_RS06290 PF14622 Ribonuclease-III-like DK885_RS06295 PF01926 50S ribosome-binding GTPase DK885_RS06295 PF07650 KH domain DK885_RS06300 PF02565 Recombination protein O C terminal DK885_RS06300 PF11967 Recombination protein O N terminal DK885_RS06305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DK885_RS06310 PF01648 4'-phosphopantetheinyl transferase superfamily DK885_RS06330 PF12838 4Fe-4S dicluster domain DK885_RS06335 PF01418 Helix-turn-helix domain, rpiR family DK885_RS06335 PF01380 SIS domain DK885_RS06345 PF14437 MafB19-like deaminase DK885_RS06350 PF01464 Transglycosylase SLT domain DK885_RS06350 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS06360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DK885_RS06360 PF02769 AIR synthase related protein, C-terminal domain DK885_RS06360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DK885_RS06365 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS06370 PF13942 YfhG lipoprotein DK885_RS06375 PF00072 Response regulator receiver domain DK885_RS06375 PF00158 Sigma-54 interaction domain DK885_RS06380 PF00543 Nitrogen regulatory protein P-II DK885_RS06385 PF00970 Oxidoreductase FAD-binding domain DK885_RS06385 PF00042 Globin DK885_RS06385 PF00175 Oxidoreductase NAD-binding domain DK885_RS06390 PF00464 Serine hydroxymethyltransferase DK885_RS06395 PF00480 ROK family DK885_RS06400 PF17128 Domain of unknown function (DUF5107) DK885_RS06400 PF13181 Tetratricopeptide repeat DK885_RS06405 PF13407 Periplasmic binding protein domain DK885_RS06410 PF00005 ABC transporter DK885_RS06415 PF02653 Branched-chain amino acid transport system / permease component DK885_RS06420 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS06420 PF00107 Zinc-binding dehydrogenase DK885_RS06425 PF01263 Aldose 1-epimerase DK885_RS06430 PF07681 DoxX DK885_RS06435 PF14759 Reductase C-terminal DK885_RS06435 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS06440 PF00106 short chain dehydrogenase DK885_RS06445 PF00355 Rieske [2Fe-2S] domain DK885_RS06450 PF00866 Ring hydroxylating beta subunit DK885_RS06455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DK885_RS06455 PF00355 Rieske [2Fe-2S] domain DK885_RS06460 PF03466 LysR substrate binding domain DK885_RS06460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS06465 PF12832 MFS_1 like family DK885_RS06470 PF00874 PRD domain DK885_RS06475 PF12146 Serine aminopeptidase, S33 DK885_RS06480 PF00459 Inositol monophosphatase family DK885_RS06485 PF00588 SpoU rRNA Methylase family DK885_RS06490 PF02082 Transcriptional regulator DK885_RS06495 PF00266 Aminotransferase class-V DK885_RS06500 PF01592 NifU-like N terminal domain DK885_RS06505 PF01521 Iron-sulphur cluster biosynthesis DK885_RS06510 PF07743 HSCB C-terminal oligomerisation domain DK885_RS06515 PF00012 Hsp70 protein DK885_RS06520 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS06525 PF04384 Iron-sulphur cluster assembly DK885_RS06530 PF12404 Peptidase DK885_RS06530 PF00883 Cytosol aminopeptidase family, catalytic domain DK885_RS06535 PF07179 SseB protein N-terminal domain DK885_RS06535 PF14581 SseB protein C-terminal domain DK885_RS06540 PF00581 Rhodanese-like domain DK885_RS06545 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DK885_RS06545 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DK885_RS06545 PF07678 A-macroglobulin TED domain DK885_RS06545 PF07703 Alpha-2-macroglobulin bait region domain DK885_RS06545 PF00207 Alpha-2-macroglobulin family DK885_RS06545 PF01835 MG2 domain DK885_RS06545 PF17962 Bacterial macroglobulin domain 6 DK885_RS06545 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DK885_RS06545 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DK885_RS06550 PF06832 Penicillin-Binding Protein C-terminus Family DK885_RS06550 PF00912 Transglycosylase DK885_RS06550 PF00905 Penicillin binding protein transpeptidase domain DK885_RS06555 PF00334 Nucleoside diphosphate kinase DK885_RS06560 PF04055 Radical SAM superfamily DK885_RS06570 PF13464 Domain of unknown function (DUF4115) DK885_RS06575 PF04551 GcpE protein DK885_RS06580 PF13393 Histidyl-tRNA synthetase DK885_RS06580 PF03129 Anticodon binding domain DK885_RS06585 PF09976 Tetratricopeptide repeat-like domain DK885_RS06590 PF13360 PQQ-like domain DK885_RS06595 PF01926 50S ribosome-binding GTPase DK885_RS06595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DK885_RS06600 PF07191 zinc-ribbons DK885_RS06605 PF13742 OB-fold nucleic acid binding domain DK885_RS06605 PF02601 Exonuclease VII, large subunit DK885_RS06610 PF00571 CBS domain DK885_RS06610 PF00478 IMP dehydrogenase / GMP reductase domain DK885_RS06615 PF02540 NAD synthase DK885_RS06615 PF00958 GMP synthase C terminal domain DK885_RS06615 PF00117 Glutamine amidotransferase class-I DK885_RS06620 PF17358 Family of unknown function (DUF5384) DK885_RS06625 PF05433 Glycine zipper 2TM domain DK885_RS06635 PF11119 Protein of unknown function (DUF2633) DK885_RS06645 PF05231 MASE1 DK885_RS06645 PF00563 EAL domain DK885_RS06650 PF02541 Ppx/GppA phosphatase family DK885_RS06655 PF17941 Polyphosphate kinase C-terminal domain 1 DK885_RS06655 PF02503 Polyphosphate kinase middle domain DK885_RS06655 PF13090 Polyphosphate kinase C-terminal domain 2 DK885_RS06655 PF13089 Polyphosphate kinase N-terminal domain DK885_RS06660 PF00551 Formyl transferase DK885_RS06665 PF02769 AIR synthase related protein, C-terminal domain DK885_RS06665 PF00586 AIR synthase related protein, N-terminal domain DK885_RS06680 PF00860 Permease family DK885_RS06685 PF00308 Bacterial dnaA protein DK885_RS06690 PF03960 ArsC family DK885_RS06695 PF01435 Peptidase family M48 DK885_RS06700 PF01594 AI-2E family transporter DK885_RS06710 PF01226 Formate/nitrite transporter DK885_RS06715 PF00158 Sigma-54 interaction domain DK885_RS06715 PF01590 GAF domain DK885_RS06720 PF07450 Formate hydrogenlyase maturation protein HycH DK885_RS06725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DK885_RS06730 PF12838 4Fe-4S dicluster domain DK885_RS06735 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DK885_RS06735 PF00374 Nickel-dependent hydrogenase DK885_RS06735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DK885_RS06740 PF00361 Proton-conducting membrane transporter DK885_RS06740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DK885_RS06745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DK885_RS06750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DK885_RS06750 PF00361 Proton-conducting membrane transporter DK885_RS06755 PF00146 NADH dehydrogenase DK885_RS06760 PF00361 Proton-conducting membrane transporter DK885_RS06765 PF00037 4Fe-4S binding domain DK885_RS06765 PF12798 4Fe-4S binding domain DK885_RS06770 PF00578 AhpC/TSA family DK885_RS06775 PF01842 ACT domain DK885_RS06780 PF00701 Dihydrodipicolinate synthetase family DK885_RS06785 PF06804 NlpB/DapX lipoprotein DK885_RS06790 PF01259 SAICAR synthetase DK885_RS06795 PF04228 Putative neutral zinc metallopeptidase DK885_RS06800 PF13718 GNAT acetyltransferase 2 DK885_RS06800 PF05127 Helicase DK885_RS06800 PF08351 Domain of unknown function (DUF1726) DK885_RS06800 PF17176 tRNA-binding domain DK885_RS06805 PF02230 Phospholipase/Carboxylesterase DK885_RS06810 PF13980 Uncharacterised protein family (UPF0370) DK885_RS06815 PF07687 Peptidase dimerisation domain DK885_RS06815 PF01546 Peptidase family M20/M25/M40 DK885_RS06820 PF03960 ArsC family DK885_RS06830 PF00873 AcrB/AcrD/AcrF family DK885_RS06835 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DK885_RS06835 PF07730 Histidine kinase DK885_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS06835 PF00672 HAMP domain DK885_RS06840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS06840 PF13247 4Fe-4S dicluster domain DK885_RS06840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DK885_RS06845 PF00293 NUDIX domain DK885_RS06850 PF06674 Protein of unknown function (DUF1176) DK885_RS06855 PF02779 Transketolase, pyrimidine binding domain DK885_RS06855 PF02780 Transketolase, C-terminal domain DK885_RS06855 PF00456 Transketolase, thiamine diphosphate binding domain DK885_RS06860 PF00923 Transaldolase/Fructose-6-phosphate aldolase DK885_RS06865 PF03949 Malic enzyme, NAD binding domain DK885_RS06865 PF01515 Phosphate acetyl/butaryl transferase DK885_RS06865 PF00390 Malic enzyme, N-terminal domain DK885_RS06870 PF00936 BMC domain DK885_RS06875 PF10662 Ethanolamine utilisation - propanediol utilisation DK885_RS06880 PF06249 Ethanolamine utilisation protein EutQ DK885_RS06885 PF01923 Cobalamin adenosyltransferase DK885_RS06890 PF01515 Phosphate acetyl/butaryl transferase DK885_RS06895 PF00936 BMC domain DK885_RS06900 PF03319 Ethanolamine utilisation protein EutN/carboxysome DK885_RS06905 PF00171 Aldehyde dehydrogenase family DK885_RS06915 PF00465 Iron-containing alcohol dehydrogenase DK885_RS06920 PF04346 Ethanolamine utilisation protein, EutH DK885_RS06925 PF06277 Ethanolamine utilisation protein EutA DK885_RS06930 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DK885_RS06935 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DK885_RS06940 PF00936 BMC domain DK885_RS06945 PF00936 BMC domain DK885_RS06945 PF16365 Ethanolamine utilization protein EutK C-terminus DK885_RS06955 PF01218 Coproporphyrinogen III oxidase DK885_RS06960 PF01520 N-acetylmuramoyl-L-alanine amidase DK885_RS06965 PF00583 Acetyltransferase (GNAT) family DK885_RS06970 PF11143 Protein of unknown function (DUF2919) DK885_RS06975 PF06572 Protein of unknown function (DUF1131) DK885_RS06980 PF04261 Dyp-type peroxidase family DK885_RS06985 PF00144 Beta-lactamase DK885_RS06990 PF02378 Phosphotransferase system, EIIC DK885_RS06990 PF00367 phosphotransferase system, EIIB DK885_RS06995 PF01380 SIS domain DK885_RS07000 PF01418 Helix-turn-helix domain, rpiR family DK885_RS07000 PF01380 SIS domain DK885_RS07020 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS07030 PF00005 ABC transporter DK885_RS07035 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS07040 PF05406 WGR domain DK885_RS07045 PF17263 Family of unknown function (DUF5329) DK885_RS07050 PF08543 Phosphomethylpyrimidine kinase DK885_RS07055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK885_RS07060 PF02896 PEP-utilising enzyme, TIM barrel domain DK885_RS07060 PF00391 PEP-utilising enzyme, mobile domain DK885_RS07060 PF05524 PEP-utilising enzyme, N-terminal DK885_RS07065 PF00381 PTS HPr component phosphorylation site DK885_RS07070 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS07080 PF04354 ZipA, C-terminal FtsZ-binding domain DK885_RS07085 PF00533 BRCA1 C Terminus (BRCT) domain DK885_RS07085 PF01653 NAD-dependent DNA ligase adenylation domain DK885_RS07085 PF03120 NAD-dependent DNA ligase OB-fold domain DK885_RS07085 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DK885_RS07085 PF12826 Helix-hairpin-helix motif DK885_RS07090 PF12843 Putative quorum-sensing-regulated virulence factor DK885_RS07095 PF13593 SBF-like CPA transporter family (DUF4137) DK885_RS07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS07100 PF03466 LysR substrate binding domain DK885_RS07105 PF03502 Nucleoside-specific channel-forming protein, Tsx DK885_RS07110 PF01048 Phosphorylase superfamily DK885_RS07115 PF03825 Nucleoside H+ symporter DK885_RS07125 PF03466 LysR substrate binding domain DK885_RS07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS07155 PF00749 tRNA synthetases class I (E and Q), catalytic domain DK885_RS07160 PF07037 Putative transcription regulator (DUF1323) DK885_RS07165 PF07037 Putative transcription regulator (DUF1323) DK885_RS07180 PF05231 MASE1 DK885_RS07180 PF00563 EAL domain DK885_RS07185 PF01609 Transposase DDE domain DK885_RS07190 PF01773 Na+ dependent nucleoside transporter N-terminus DK885_RS07190 PF07662 Na+ dependent nucleoside transporter C-terminus DK885_RS07190 PF07670 Nucleoside recognition DK885_RS07195 PF01566 Natural resistance-associated macrophage protein DK885_RS07200 PF10697 Protein of unknown function (DUF2502) DK885_RS07205 PF00654 Voltage gated chloride channel DK885_RS07210 PF02685 Glucokinase DK885_RS07215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS07220 PF02378 Phosphotransferase system, EIIC DK885_RS07225 PF01321 Creatinase/Prolidase N-terminal domain DK885_RS07225 PF00557 Metallopeptidase family M24 DK885_RS07230 PF05343 M42 glutamyl aminopeptidase DK885_RS07235 PF05524 PEP-utilising enzyme, N-terminal DK885_RS07235 PF02896 PEP-utilising enzyme, TIM barrel domain DK885_RS07235 PF00381 PTS HPr component phosphorylation site DK885_RS07235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS07235 PF00391 PEP-utilising enzyme, mobile domain DK885_RS07240 PF12833 Helix-turn-helix domain DK885_RS07245 PF04397 LytTr DNA-binding domain DK885_RS07245 PF00072 Response regulator receiver domain DK885_RS07250 PF07694 5TMR of 5TMR-LYT DK885_RS07250 PF06580 Histidine kinase DK885_RS07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS07255 PF00155 Aminotransferase class I and II DK885_RS07265 PF03279 Bacterial lipid A biosynthesis acyltransferase DK885_RS07275 PF10810 Protein of unknown function (DUF2545) DK885_RS07285 PF10938 YfdX protein DK885_RS07290 PF02515 CoA-transferase family III DK885_RS07295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DK885_RS07295 PF00205 Thiamine pyrophosphate enzyme, central domain DK885_RS07295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DK885_RS07300 PF03547 Membrane transport protein DK885_RS07305 PF02515 CoA-transferase family III DK885_RS07310 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS07310 PF01627 Hpt domain DK885_RS07310 PF00072 Response regulator receiver domain DK885_RS07310 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS07315 PF00072 Response regulator receiver domain DK885_RS07315 PF00196 Bacterial regulatory proteins, luxR family DK885_RS07320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS07320 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS07325 PF07690 Major Facilitator Superfamily DK885_RS07330 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS07335 PF02447 GntP family permease DK885_RS07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS07340 PF03466 LysR substrate binding domain DK885_RS07365 PF10065 Uncharacterized conserved protein (DUF2303) DK885_RS07380 PF06069 PerC transcriptional activator DK885_RS07385 PF05869 DNA N-6-adenine-methyltransferase (Dam) DK885_RS07395 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DK885_RS07400 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DK885_RS07420 PF04138 GtrA-like protein DK885_RS07425 PF00589 Phage integrase family DK885_RS07425 PF14659 Phage integrase, N-terminal SAM-like domain DK885_RS07425 PF13356 Arm DNA-binding domain DK885_RS07435 PF01226 Formate/nitrite transporter DK885_RS07445 PF04333 MlaA lipoprotein DK885_RS07460 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DK885_RS07470 PF04175 Protein of unknown function (DUF406) DK885_RS07475 PF00108 Thiolase, N-terminal domain DK885_RS07475 PF02803 Thiolase, C-terminal domain DK885_RS07480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DK885_RS07480 PF00378 Enoyl-CoA hydratase/isomerase DK885_RS07480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DK885_RS07485 PF00300 Histidine phosphatase superfamily (branch 1) DK885_RS07490 PF00419 Fimbrial protein DK885_RS07500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS07500 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS07505 PF00419 Fimbrial protein DK885_RS07510 PF00419 Fimbrial protein DK885_RS07515 PF00419 Fimbrial protein DK885_RS07520 PF11245 Protein of unknown function (DUF2544) DK885_RS07525 PF01713 Smr domain DK885_RS07530 PF05175 Methyltransferase small domain DK885_RS07535 PF01264 Chorismate synthase DK885_RS07540 PF03411 Penicillin-insensitive murein endopeptidase DK885_RS07545 PF01925 Sulfite exporter TauE/SafE DK885_RS07550 PF04315 Elongation factor P hydroxylase DK885_RS07555 PF08891 YfcL protein DK885_RS07560 PF01266 FAD dependent oxidoreductase DK885_RS07560 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DK885_RS07565 PF00109 Beta-ketoacyl synthase, N-terminal domain DK885_RS07565 PF02801 Beta-ketoacyl synthase, C-terminal domain DK885_RS07575 PF07690 Major Facilitator Superfamily DK885_RS07585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DK885_RS07585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DK885_RS07585 PF11890 Domain of unknown function (DUF3410) DK885_RS07590 PF01118 Semialdehyde dehydrogenase, NAD binding domain DK885_RS07590 PF02774 Semialdehyde dehydrogenase, dimerisation domain DK885_RS07595 PF01416 tRNA pseudouridine synthase DK885_RS07600 PF09335 SNARE associated Golgi protein DK885_RS07605 PF01039 Carboxyl transferase domain DK885_RS07605 PF17848 Acetyl-coA carboxylase zinc finger domain DK885_RS07610 PF02875 Mur ligase family, glutamate ligase domain DK885_RS07610 PF08245 Mur ligase middle domain DK885_RS07615 PF05036 Sporulation related domain DK885_RS07620 PF02674 Colicin V production protein DK885_RS07625 PF00156 Phosphoribosyl transferase domain DK885_RS07630 PF02441 Flavoprotein DK885_RS07635 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS07640 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS07645 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS07650 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS07655 PF00005 ABC transporter DK885_RS07660 PF04754 Putative transposase, YhgA-like DK885_RS07665 PF08338 Domain of unknown function (DUF1731) DK885_RS07665 PF01370 NAD dependent epimerase/dehydratase family DK885_RS07670 PF02152 Dihydroneopterin aldolase DK885_RS07675 PF02798 Glutathione S-transferase, N-terminal domain DK885_RS07675 PF00043 Glutathione S-transferase, C-terminal domain DK885_RS07680 PF14834 Glutathione S-transferase, C-terminal domain DK885_RS07680 PF02798 Glutathione S-transferase, N-terminal domain DK885_RS07685 PF12850 Calcineurin-like phosphoesterase superfamily domain DK885_RS07690 PF00293 NUDIX domain DK885_RS07695 PF03606 C4-dicarboxylate anaerobic carrier DK885_RS07700 PF07085 DRTGG domain DK885_RS07700 PF01515 Phosphate acetyl/butaryl transferase DK885_RS07705 PF00871 Acetokinase family DK885_RS07710 PF04217 Protein of unknown function, DUF412 DK885_RS07715 PF03887 YfbU domain DK885_RS07720 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS07725 PF03600 Citrate transporter DK885_RS07725 PF02080 TrkA-C domain DK885_RS07735 PF00155 Aminotransferase class I and II DK885_RS07750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DK885_RS07755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DK885_RS07760 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DK885_RS07760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DK885_RS07770 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DK885_RS07770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DK885_RS07770 PF10531 SLBB domain DK885_RS07775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DK885_RS07775 PF00384 Molybdopterin oxidoreductase DK885_RS07775 PF01568 Molydopterin dinucleotide binding domain DK885_RS07775 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DK885_RS07780 PF00146 NADH dehydrogenase DK885_RS07785 PF12838 4Fe-4S dicluster domain DK885_RS07790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DK885_RS07795 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DK885_RS07800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DK885_RS07800 PF00361 Proton-conducting membrane transporter DK885_RS07805 PF00361 Proton-conducting membrane transporter DK885_RS07810 PF00361 Proton-conducting membrane transporter DK885_RS07830 PF08974 Domain of unknown function (DUF1877) DK885_RS07835 PF04389 Peptidase family M28 DK885_RS07840 PF00092 von Willebrand factor type A domain DK885_RS07840 PF12450 von Willebrand factor DK885_RS07840 PF12034 Domain of unknown function (DUF3520) DK885_RS07845 PF02902 Ulp1 protease family, C-terminal catalytic domain DK885_RS07850 PF12706 Beta-lactamase superfamily domain DK885_RS07855 PF13673 Acetyltransferase (GNAT) domain DK885_RS07860 PF05957 Bacterial protein of unknown function (DUF883) DK885_RS07865 PF00425 chorismate binding enzyme DK885_RS07870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DK885_RS07870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DK885_RS07870 PF16582 Middle domain of thiamine pyrophosphate DK885_RS07875 PF12697 Alpha/beta hydrolase family DK885_RS07880 PF00378 Enoyl-CoA hydratase/isomerase DK885_RS07885 PF13378 Enolase C-terminal domain-like DK885_RS07890 PF13193 AMP-binding enzyme C-terminal domain DK885_RS07890 PF00501 AMP-binding enzyme DK885_RS07905 PF00892 EamA-like transporter family DK885_RS07910 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DK885_RS07915 PF01522 Polysaccharide deacetylase DK885_RS07920 PF00551 Formyl transferase DK885_RS07920 PF02911 Formyl transferase, C-terminal domain DK885_RS07920 PF01370 NAD dependent epimerase/dehydratase family DK885_RS07925 PF00535 Glycosyl transferase family 2 DK885_RS07930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DK885_RS07935 PF00300 Histidine phosphatase superfamily (branch 1) DK885_RS07940 PF00293 NUDIX domain DK885_RS07945 PF07437 YfaZ precursor DK885_RS07950 PF00994 Probable molybdopterin binding domain DK885_RS07955 PF09339 IclR helix-turn-helix domain DK885_RS07955 PF01614 Bacterial transcriptional regulator DK885_RS07960 PF13378 Enolase C-terminal domain-like DK885_RS07960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DK885_RS07965 PF07690 Major Facilitator Superfamily DK885_RS07970 PF03328 HpcH/HpaI aldolase/citrate lyase family DK885_RS07980 PF04754 Putative transposase, YhgA-like DK885_RS07985 PF02754 Cysteine-rich domain DK885_RS07985 PF13183 4Fe-4S dicluster domain DK885_RS07990 PF00890 FAD binding domain DK885_RS07995 PF04324 BFD-like [2Fe-2S] binding domain DK885_RS07995 PF01266 FAD dependent oxidoreductase DK885_RS08000 PF07690 Major Facilitator Superfamily DK885_RS08005 PF03009 Glycerophosphoryl diester phosphodiesterase family DK885_RS08020 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS08025 PF00268 Ribonucleotide reductase, small chain DK885_RS08030 PF03477 ATP cone domain DK885_RS08030 PF02867 Ribonucleotide reductase, barrel domain DK885_RS08030 PF00317 Ribonucleotide reductase, all-alpha domain DK885_RS08040 PF03797 Autotransporter beta-domain DK885_RS08040 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat DK885_RS08040 PF12951 Passenger-associated-transport-repeat DK885_RS08050 PF03989 DNA gyrase C-terminal domain, beta-propeller DK885_RS08050 PF00521 DNA gyrase/topoisomerase IV, subunit A DK885_RS08055 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) DK885_RS08060 PF06672 Protein of unknown function (DUF1175) DK885_RS08065 PF00207 Alpha-2-macroglobulin family DK885_RS08065 PF07703 Alpha-2-macroglobulin bait region domain DK885_RS08065 PF01835 MG2 domain DK885_RS08070 PF01835 MG2 domain DK885_RS08070 PF07703 Alpha-2-macroglobulin bait region domain DK885_RS08070 PF00207 Alpha-2-macroglobulin family DK885_RS08075 PF10062 Predicted secreted protein (DUF2300) DK885_RS08075 PF08486 Stage II sporulation protein DK885_RS08080 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) DK885_RS08085 PF02803 Thiolase, C-terminal domain DK885_RS08085 PF00108 Thiolase, N-terminal domain DK885_RS08090 PF02667 Short chain fatty acid transporter DK885_RS08095 PF01144 Coenzyme A transferase DK885_RS08100 PF01144 Coenzyme A transferase DK885_RS08105 PF00072 Response regulator receiver domain DK885_RS08105 PF02954 Bacterial regulatory protein, Fis family DK885_RS08105 PF00158 Sigma-54 interaction domain DK885_RS08110 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS08110 PF00989 PAS fold DK885_RS08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS08115 PF00072 Response regulator receiver domain DK885_RS08115 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS08115 PF09456 RcsC Alpha-Beta-Loop (ABL) DK885_RS08120 PF00072 Response regulator receiver domain DK885_RS08120 PF00196 Bacterial regulatory proteins, luxR family DK885_RS08125 PF01627 Hpt domain DK885_RS08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS08125 PF16359 RcsD-ABL domain DK885_RS08140 PF00267 Gram-negative porin DK885_RS08145 PF02424 ApbE family DK885_RS08150 PF02805 Metal binding domain of Ada DK885_RS08150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DK885_RS08150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DK885_RS08150 PF12833 Helix-turn-helix domain DK885_RS08155 PF13532 2OG-Fe(II) oxygenase superfamily DK885_RS08160 PF00005 ABC transporter DK885_RS08165 PF06039 Malate:quinone oxidoreductase (Mqo) DK885_RS08170 PF03974 Ecotin DK885_RS08180 PF13187 4Fe-4S dicluster domain DK885_RS08180 PF12800 4Fe-4S binding domain DK885_RS08180 PF00037 4Fe-4S binding domain DK885_RS08185 PF03927 NapD protein DK885_RS08190 PF00384 Molybdopterin oxidoreductase DK885_RS08190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DK885_RS08190 PF01568 Molydopterin dinucleotide binding domain DK885_RS08195 PF12838 4Fe-4S dicluster domain DK885_RS08195 PF12800 4Fe-4S binding domain DK885_RS08200 PF13237 4Fe-4S dicluster domain DK885_RS08200 PF12801 4Fe-4S binding domain DK885_RS08205 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DK885_RS08210 PF03264 NapC/NirT cytochrome c family, N-terminal region DK885_RS08215 PF00005 ABC transporter DK885_RS08220 PF03379 CcmB protein DK885_RS08225 PF01578 Cytochrome C assembly protein DK885_RS08230 PF04995 Heme exporter protein D (CcmD) DK885_RS08235 PF03100 CcmE DK885_RS08240 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DK885_RS08240 PF01578 Cytochrome C assembly protein DK885_RS08245 PF08534 Redoxin DK885_RS08250 PF03918 Cytochrome C biogenesis protein DK885_RS08255 PF00072 Response regulator receiver domain DK885_RS08255 PF00196 Bacterial regulatory proteins, luxR family DK885_RS08270 PF05598 Transposase domain (DUF772) DK885_RS08270 PF01609 Transposase DDE domain DK885_RS08280 PF03212 Pertactin DK885_RS08280 PF03797 Autotransporter beta-domain DK885_RS08280 PF16168 Adhesin of bacterial autotransporter system, probable stalk DK885_RS08295 PF00884 Sulfatase DK885_RS08295 PF11893 Domain of unknown function (DUF3413) DK885_RS08300 PF07208 Protein of unknown function (DUF1414) DK885_RS08305 PF04245 37-kD nucleoid-associated bacterial protein DK885_RS08310 PF01386 Ribosomal L25p family DK885_RS08315 PF00271 Helicase conserved C-terminal domain DK885_RS08315 PF04851 Type III restriction enzyme, res subunit DK885_RS08325 PF01479 S4 domain DK885_RS08325 PF00849 RNA pseudouridylate synthase DK885_RS08330 PF07690 Major Facilitator Superfamily DK885_RS08340 PF13989 YejG-like protein DK885_RS08345 PF00005 ABC transporter DK885_RS08345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS08350 PF12911 N-terminal TM domain of oligopeptide transport permease C DK885_RS08350 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS08355 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS08360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS08365 PF12792 CSS motif domain associated with EAL DK885_RS08365 PF00563 EAL domain DK885_RS08370 PF00877 NlpC/P60 family DK885_RS08375 PF01569 PAP2 superfamily DK885_RS08380 PF02492 CobW/HypB/UreG, nucleotide-binding domain DK885_RS08380 PF07683 Cobalamin synthesis protein cobW C-terminal domain DK885_RS08385 PF01232 Mannitol dehydrogenase Rossmann domain DK885_RS08385 PF08125 Mannitol dehydrogenase C-terminal domain DK885_RS08390 PF08207 Elongation factor P (EF-P) KOW-like domain DK885_RS08390 PF09285 Elongation factor P, C-terminal DK885_RS08390 PF01132 Elongation factor P (EF-P) OB domain DK885_RS08395 PF03692 Putative zinc- or iron-chelating domain DK885_RS08400 PF07690 Major Facilitator Superfamily DK885_RS08405 PF00381 PTS HPr component phosphorylation site DK885_RS08405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS08410 PF00294 pfkB family carbohydrate kinase DK885_RS08415 PF02378 Phosphotransferase system, EIIC DK885_RS08415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS08420 PF00294 pfkB family carbohydrate kinase DK885_RS08425 PF04227 Indigoidine synthase A like protein DK885_RS08430 PF01773 Na+ dependent nucleoside transporter N-terminus DK885_RS08430 PF07662 Na+ dependent nucleoside transporter C-terminus DK885_RS08435 PF00027 Cyclic nucleotide-binding domain DK885_RS08440 PF01156 Inosine-uridine preferring nucleoside hydrolase DK885_RS08445 PF07662 Na+ dependent nucleoside transporter C-terminus DK885_RS08445 PF01773 Na+ dependent nucleoside transporter N-terminus DK885_RS08450 PF00294 pfkB family carbohydrate kinase DK885_RS08455 PF01261 Xylose isomerase-like TIM barrel DK885_RS08460 PF03601 Conserved hypothetical protein 698 DK885_RS08465 PF03466 LysR substrate binding domain DK885_RS08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS08475 PF00324 Amino acid permease DK885_RS08485 PF00593 TonB dependent receptor DK885_RS08485 PF07715 TonB-dependent Receptor Plug Domain DK885_RS08490 PF00756 Putative esterase DK885_RS08505 PF01227 GTP cyclohydrolase I DK885_RS08510 PF04235 Protein of unknown function (DUF418) DK885_RS08520 PF00356 Bacterial regulatory proteins, lacI family DK885_RS08525 PF13407 Periplasmic binding protein domain DK885_RS08530 PF00005 ABC transporter DK885_RS08535 PF02653 Branched-chain amino acid transport system / permease component DK885_RS08540 PF01180 Dihydroorotate dehydrogenase DK885_RS08545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DK885_RS08545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS08550 PF10808 Protein of unknown function (DUF2542) DK885_RS08555 PF02698 DUF218 domain DK885_RS08560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DK885_RS08560 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DK885_RS08565 PF04172 LrgB-like family DK885_RS08570 PF03788 LrgA family DK885_RS08575 PF01207 Dihydrouridine synthase (Dus) DK885_RS08605 PF09335 SNARE associated Golgi protein DK885_RS08610 PF04893 Yip1 domain DK885_RS08615 PF00768 D-alanyl-D-alanine carboxypeptidase DK885_RS08620 PF09330 D-lactate dehydrogenase, membrane binding DK885_RS08620 PF01565 FAD binding domain DK885_RS08625 PF14310 Fibronectin type III-like domain DK885_RS08625 PF00933 Glycosyl hydrolase family 3 N terminal domain DK885_RS08625 PF01915 Glycosyl hydrolase family 3 C-terminal domain DK885_RS08630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DK885_RS08635 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS08640 PF00005 ABC transporter DK885_RS08645 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS08655 PF13411 MerR HTH family regulatory protein DK885_RS08660 PF07694 5TMR of 5TMR-LYT DK885_RS08660 PF06580 Histidine kinase DK885_RS08665 PF04397 LytTr DNA-binding domain DK885_RS08665 PF00072 Response regulator receiver domain DK885_RS08670 PF07308 Protein of unknown function (DUF1456) DK885_RS08675 PF06998 Protein of unknown function (DUF1307) DK885_RS08680 PF04434 SWIM zinc finger DK885_RS08685 PF05762 VWA domain containing CoxE-like protein DK885_RS08695 PF07728 AAA domain (dynein-related subfamily) DK885_RS08705 PF13569 Domain of unknown function (DUF4132) DK885_RS08720 PF05406 WGR domain DK885_RS08725 PF01588 Putative tRNA binding domain DK885_RS08725 PF09334 tRNA synthetases class I (M) DK885_RS08730 PF10609 NUBPL iron-transfer P-loop NTPase DK885_RS08735 PF10836 Protein of unknown function (DUF2574) DK885_RS08745 PF00419 Fimbrial protein DK885_RS08750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS08750 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS08755 PF13953 PapC C-terminal domain DK885_RS08755 PF00577 Outer membrane usher protein DK885_RS08755 PF13954 PapC N-terminal domain DK885_RS08760 PF00419 Fimbrial protein DK885_RS08765 PF11776 Nickel/cobalt transporter regulator DK885_RS08770 PF03824 High-affinity nickel-transport protein DK885_RS08775 PF02583 Metal-sensitive transcriptional repressor DK885_RS08780 PF02110 Hydroxyethylthiazole kinase family DK885_RS08785 PF08543 Phosphomethylpyrimidine kinase DK885_RS08790 PF01183 Glycosyl hydrolases family 25 DK885_RS08795 PF07702 UTRA domain DK885_RS08795 PF00392 Bacterial regulatory proteins, gntR family DK885_RS08800 PF00294 pfkB family carbohydrate kinase DK885_RS08805 PF03747 ADP-ribosylglycohydrolase DK885_RS08810 PF03825 Nucleoside H+ symporter DK885_RS08815 PF01791 DeoC/LacD family aldolase DK885_RS08820 PF01116 Fructose-bisphosphate aldolase class-II DK885_RS08845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS08850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS08855 PF03611 PTS system sugar-specific permease component DK885_RS08860 PF00107 Zinc-binding dehydrogenase DK885_RS08860 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS08880 PF00781 Diacylglycerol kinase catalytic domain DK885_RS08900 PF04606 Ogr/Delta-like zinc finger DK885_RS08905 PF01136 Peptidase family U32 DK885_RS08905 PF16325 Peptidase family U32 C-terminal domain DK885_RS08910 PF07411 Domain of unknown function (DUF1508) DK885_RS08915 PF00486 Transcriptional regulatory protein, C terminal DK885_RS08915 PF00072 Response regulator receiver domain DK885_RS08920 PF00672 HAMP domain DK885_RS08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS08920 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS08925 PF07690 Major Facilitator Superfamily DK885_RS08930 PF00873 AcrB/AcrD/AcrF family DK885_RS08935 PF00873 AcrB/AcrD/AcrF family DK885_RS08940 PF13533 Biotin-lipoyl like DK885_RS08955 PF00092 von Willebrand factor type A domain DK885_RS08965 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) DK885_RS08975 PF00012 Hsp70 protein DK885_RS08985 PF00730 HhH-GPD superfamily base excision DNA repair protein DK885_RS08985 PF06029 AlkA N-terminal domain DK885_RS08990 PF13426 PAS domain DK885_RS08990 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS08990 PF05231 MASE1 DK885_RS08990 PF08447 PAS fold DK885_RS08990 PF08448 PAS fold DK885_RS08990 PF00563 EAL domain DK885_RS08995 PF00485 Phosphoribulokinase / Uridine kinase family DK885_RS09000 PF00692 dUTPase DK885_RS09005 PF05170 AsmA family DK885_RS09010 PF03471 Transporter associated domain DK885_RS09010 PF00571 CBS domain DK885_RS09010 PF03741 Integral membrane protein TerC family DK885_RS09015 PF10531 SLBB domain DK885_RS09015 PF02563 Polysaccharide biosynthesis/export protein DK885_RS09015 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DK885_RS09020 PF01451 Low molecular weight phosphotyrosine protein phosphatase DK885_RS09025 PF13614 AAA domain DK885_RS09025 PF02706 Chain length determinant protein DK885_RS09025 PF13807 G-rich domain on putative tyrosine kinase DK885_RS09030 PF00535 Glycosyl transferase family 2 DK885_RS09035 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS09040 PF13439 Glycosyltransferase Family 4 DK885_RS09040 PF00534 Glycosyl transferases group 1 DK885_RS09050 PF00535 Glycosyl transferase family 2 DK885_RS09055 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS09060 PF16363 GDP-mannose 4,6 dehydratase DK885_RS09065 PF01370 NAD dependent epimerase/dehydratase family DK885_RS09070 PF00293 NUDIX domain DK885_RS09075 PF13579 Glycosyl transferase 4-like domain DK885_RS09075 PF00534 Glycosyl transferases group 1 DK885_RS09080 PF00483 Nucleotidyl transferase DK885_RS09080 PF01050 Mannose-6-phosphate isomerase DK885_RS09085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK885_RS09085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK885_RS09085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK885_RS09085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK885_RS09090 PF02397 Bacterial sugar transferase DK885_RS09100 PF04230 Polysaccharide pyruvyl transferase DK885_RS09105 PF00534 Glycosyl transferases group 1 DK885_RS09105 PF13439 Glycosyltransferase Family 4 DK885_RS09115 PF00483 Nucleotidyl transferase DK885_RS09125 PF16363 GDP-mannose 4,6 dehydratase DK885_RS09135 PF00483 Nucleotidyl transferase DK885_RS09140 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DK885_RS09145 PF01943 Polysaccharide biosynthesis protein DK885_RS09150 PF03275 UDP-galactopyranose mutase DK885_RS09165 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS09170 PF00534 Glycosyl transferases group 1 DK885_RS09185 PF01609 Transposase DDE domain DK885_RS09185 PF05598 Transposase domain (DUF772) DK885_RS09195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DK885_RS09195 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DK885_RS09200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DK885_RS09200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DK885_RS09200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DK885_RS09205 PF02706 Chain length determinant protein DK885_RS09210 PF01502 Phosphoribosyl-AMP cyclohydrolase DK885_RS09210 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DK885_RS09215 PF00977 Histidine biosynthesis protein DK885_RS09220 PF00977 Histidine biosynthesis protein DK885_RS09225 PF00117 Glutamine amidotransferase class-I DK885_RS09230 PF00475 Imidazoleglycerol-phosphate dehydratase DK885_RS09230 PF08645 Polynucleotide kinase 3 phosphatase DK885_RS09235 PF00155 Aminotransferase class I and II DK885_RS09240 PF00815 Histidinol dehydrogenase DK885_RS09245 PF01634 ATP phosphoribosyltransferase DK885_RS09245 PF08029 HisG, C-terminal domain DK885_RS09260 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DK885_RS09265 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DK885_RS09270 PF01370 NAD dependent epimerase/dehydratase family DK885_RS09275 PF03466 LysR substrate binding domain DK885_RS09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS09285 PF13520 Amino acid permease DK885_RS09290 PF04143 Sulphur transport DK885_RS09295 PF01206 Sulfurtransferase TusA DK885_RS09300 PF00929 Exonuclease DK885_RS09300 PF08411 Exonuclease C-terminal DK885_RS09305 PF00768 D-alanyl-D-alanine carboxypeptidase DK885_RS09305 PF07943 Penicillin-binding protein 5, C-terminal domain DK885_RS09310 PF06445 GyrI-like small molecule binding domain DK885_RS09315 PF04632 Fusaric acid resistance protein family DK885_RS09320 PF04363 Protein of unknown function (DUF496) DK885_RS09325 PF10662 Ethanolamine utilisation - propanediol utilisation DK885_RS09345 PF06755 CbtA_toxin of type IV toxin-antitoxin system DK885_RS09350 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A DK885_RS09355 PF06174 Protein of unknown function (DUF987) DK885_RS09360 PF04002 RadC-like JAB domain DK885_RS09370 PF13018 Extended Signal Peptide of Type V secretion system DK885_RS09370 PF03797 Autotransporter beta-domain DK885_RS09370 PF16168 Adhesin of bacterial autotransporter system, probable stalk DK885_RS09380 PF00593 TonB dependent receptor DK885_RS09380 PF07715 TonB-dependent Receptor Plug Domain DK885_RS09390 PF07715 TonB-dependent Receptor Plug Domain DK885_RS09410 PF01609 Transposase DDE domain DK885_RS09410 PF05598 Transposase domain (DUF772) DK885_RS09420 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DK885_RS09425 PF02654 Cobalamin-5-phosphate synthase DK885_RS09430 PF02277 Phosphoribosyltransferase DK885_RS09435 PF03734 L,D-transpeptidase catalytic domain DK885_RS09435 PF17969 L,D-transpeptidase C-terminal domain DK885_RS09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS09445 PF03466 LysR substrate binding domain DK885_RS09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS09450 PF03466 LysR substrate binding domain DK885_RS09460 PF01554 MatE DK885_RS09480 PF01709 Transcriptional regulator DK885_RS09485 PF01048 Phosphorylase superfamily DK885_RS09485 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DK885_RS09490 PF00083 Sugar (and other) transporter DK885_RS09490 PF07690 Major Facilitator Superfamily DK885_RS09500 PF11924 Inverse autotransporter, beta-domain DK885_RS09500 PF02369 Bacterial Ig-like domain (group 1) DK885_RS09500 PF09134 Invasin, domain 3 DK885_RS09510 PF06167 Glucose-regulated metallo-peptidase M90 DK885_RS09525 PF01292 Prokaryotic cytochrome b561 DK885_RS09530 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DK885_RS09535 PF01794 Ferric reductase like transmembrane component DK885_RS09540 PF00174 Oxidoreductase molybdopterin binding domain DK885_RS09545 PF00576 HIUase/Transthyretin family DK885_RS09550 PF00486 Transcriptional regulatory protein, C terminal DK885_RS09550 PF00072 Response regulator receiver domain DK885_RS09555 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS09555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS09580 PF01966 HD domain DK885_RS09585 PF18284 DNA methylase N-terminal domain DK885_RS09585 PF00145 C-5 cytosine-specific DNA methylase DK885_RS09590 PF03852 DNA mismatch endonuclease Vsr DK885_RS09595 PF00892 EamA-like transporter family DK885_RS09600 PF05661 Protein of unknown function (DUF808) DK885_RS09605 PF09926 Uncharacterized small protein (DUF2158) DK885_RS09615 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS09615 PF17151 Periplasmic sensor domain DK885_RS09625 PF10733 Protein of unknown function (DUF2525) DK885_RS09630 PF10781 Dextransucrase DSRB DK885_RS09635 PF00196 Bacterial regulatory proteins, luxR family DK885_RS09640 PF01311 Bacterial export proteins, family 1 DK885_RS09645 PF01313 Bacterial export proteins, family 3 DK885_RS09650 PF00813 FliP family DK885_RS09655 PF04347 Flagellar biosynthesis protein, FliO DK885_RS09660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DK885_RS09660 PF16973 Flagellar motor switch protein FliN N-terminal DK885_RS09665 PF02154 Flagellar motor switch protein FliM DK885_RS09665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DK885_RS09670 PF03748 Flagellar basal body-associated protein FliL DK885_RS09675 PF02120 Flagellar hook-length control protein FliK DK885_RS09680 PF02050 Flagellar FliJ protein DK885_RS09685 PF18269 T3SS EscN ATPase C-terminal domain DK885_RS09685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK885_RS09690 PF02108 Flagellar assembly protein FliH DK885_RS09695 PF01706 FliG C-terminal domain DK885_RS09695 PF14842 FliG N-terminal domain DK885_RS09695 PF14841 FliG middle domain DK885_RS09700 PF01514 Secretory protein of YscJ/FliF family DK885_RS09700 PF08345 Flagellar M-ring protein C-terminal DK885_RS09705 PF02049 Flagellar hook-basal body complex protein FliE DK885_RS09730 PF00583 Acetyltransferase (GNAT) family DK885_RS09735 PF02586 SOS response associated peptidase (SRAP) DK885_RS09740 PF01206 Sulfurtransferase TusA DK885_RS09745 PF04143 Sulphur transport DK885_RS09755 PF13987 YedD-like protein DK885_RS09760 PF00128 Alpha amylase, catalytic domain DK885_RS09760 PF02806 Alpha amylase, C-terminal all-beta domain DK885_RS09765 PF05400 Flagellar protein FliT DK885_RS09770 PF02561 Flagellar protein FliS DK885_RS09775 PF02465 Flagellar hook-associated protein 2 N-terminus DK885_RS09775 PF07195 Flagellar hook-associated protein 2 C-terminus DK885_RS09785 PF08884 Flagellin D3 domain DK885_RS09785 PF00669 Bacterial flagellin N-terminal helical region DK885_RS09785 PF00700 Bacterial flagellin C-terminal helical region DK885_RS09790 PF04545 Sigma-70, region 4 DK885_RS09790 PF04539 Sigma-70 region 3 DK885_RS09790 PF04542 Sigma-70 region 2 DK885_RS09795 PF02899 Phage integrase, N-terminal SAM-like domain DK885_RS09800 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS09805 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS09810 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS09815 PF00005 ABC transporter DK885_RS09820 PF00196 Bacterial regulatory proteins, luxR family DK885_RS09820 PF03472 Autoinducer binding domain DK885_RS09825 PF10769 Protein of unknown function (DUF2594) DK885_RS09830 PF00072 Response regulator receiver domain DK885_RS09830 PF00196 Bacterial regulatory proteins, luxR family DK885_RS09835 PF08459 UvrC Helix-hairpin-helix N-terminal DK885_RS09835 PF02151 UvrB/uvrC motif DK885_RS09835 PF01541 GIY-YIG catalytic domain DK885_RS09840 PF01066 CDP-alcohol phosphatidyltransferase DK885_RS09860 PF02810 SEC-C motif DK885_RS09860 PF03695 Uncharacterised protein family (UPF0149) DK885_RS09865 PF03222 Tryptophan/tyrosine permease family DK885_RS09870 PF10678 Protein of unknown function (DUF2492) DK885_RS09875 PF00210 Ferritin-like domain DK885_RS09880 PF13992 YecR-like lipoprotein DK885_RS09890 PF10964 Protein of unknown function (DUF2766) DK885_RS09895 PF00210 Ferritin-like domain DK885_RS09905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DK885_RS09910 PF00005 ABC transporter DK885_RS09915 PF02653 Branched-chain amino acid transport system / permease component DK885_RS09920 PF02358 Trehalose-phosphatase DK885_RS09925 PF00982 Glycosyltransferase family 20 DK885_RS09930 PF00582 Universal stress protein family DK885_RS09935 PF05247 Flagellar transcriptional activator (FlhD) DK885_RS09940 PF05280 Flagellar transcriptional activator (FlhC) DK885_RS09945 PF01618 MotA/TolQ/ExbB proton channel family DK885_RS09950 PF00691 OmpA family DK885_RS09950 PF13677 Membrane MotB of proton-channel complex MotA/MotB DK885_RS09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS09955 PF01584 CheW-like domain DK885_RS09955 PF09078 CheY binding DK885_RS09955 PF02895 Signal transducing histidine kinase, homodimeric domain DK885_RS09955 PF01627 Hpt domain DK885_RS09960 PF01584 CheW-like domain DK885_RS09965 PF02203 Tar ligand binding domain homologue DK885_RS09965 PF00672 HAMP domain DK885_RS09965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DK885_RS09970 PF00672 HAMP domain DK885_RS09970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DK885_RS09970 PF02203 Tar ligand binding domain homologue DK885_RS09975 PF01739 CheR methyltransferase, SAM binding domain DK885_RS09975 PF03705 CheR methyltransferase, all-alpha domain DK885_RS09980 PF01339 CheB methylesterase DK885_RS09980 PF00072 Response regulator receiver domain DK885_RS09985 PF00072 Response regulator receiver domain DK885_RS09990 PF04344 Chemotaxis phosphatase, CheZ DK885_RS09995 PF01312 FlhB HrpN YscU SpaS Family DK885_RS10000 PF00771 FHIPEP family DK885_RS10005 PF06366 Flagellar protein FlhE DK885_RS10010 PF07007 Lysozyme inhibitor LprI DK885_RS10015 PF05746 DALR anticodon binding domain DK885_RS10015 PF03485 Arginyl tRNA synthetase N terminal domain DK885_RS10015 PF00750 tRNA synthetases class I (R) DK885_RS10025 PF06185 YecM protein DK885_RS10030 PF03932 CutC family DK885_RS10035 PF03264 NapC/NirT cytochrome c family, N-terminal region DK885_RS10040 PF00384 Molybdopterin oxidoreductase DK885_RS10040 PF18364 Molybdopterin oxidoreductase N-terminal domain DK885_RS10040 PF01568 Molydopterin dinucleotide binding domain DK885_RS10045 PF08003 Protein of unknown function (DUF1698) DK885_RS10050 PF13649 Methyltransferase domain DK885_RS10055 PF01124 MAPEG family DK885_RS10060 PF01904 Protein of unknown function DUF72 DK885_RS10065 PF00857 Isochorismatase family DK885_RS10070 PF01336 OB-fold nucleic acid binding domain DK885_RS10070 PF00152 tRNA synthetases class II (D, K and N) DK885_RS10070 PF02938 GAD domain DK885_RS10075 PF00293 NUDIX domain DK885_RS10080 PF01709 Transcriptional regulator DK885_RS10085 PF02075 Crossover junction endodeoxyribonuclease RuvC DK885_RS10090 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DK885_RS10100 PF07499 RuvA, C-terminal domain DK885_RS10100 PF01330 RuvA N terminal domain DK885_RS10105 PF05496 Holliday junction DNA helicase RuvB P-loop domain DK885_RS10105 PF05491 RuvB C-terminal winged helix domain DK885_RS10105 PF17864 RuvB AAA lid domain DK885_RS10110 PF00950 ABC 3 transport family DK885_RS10115 PF00005 ABC transporter DK885_RS10120 PF01297 Zinc-uptake complex component A periplasmic DK885_RS10125 PF08525 Opacity-associated protein A N-terminal motif DK885_RS10125 PF01476 LysM domain DK885_RS10125 PF01551 Peptidase family M23 DK885_RS10130 PF03279 Bacterial lipid A biosynthesis acyltransferase DK885_RS10135 PF00224 Pyruvate kinase, barrel domain DK885_RS10135 PF02887 Pyruvate kinase, alpha/beta domain DK885_RS10140 PF01418 Helix-turn-helix domain, rpiR family DK885_RS10140 PF01380 SIS domain DK885_RS10145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DK885_RS10145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DK885_RS10150 PF00920 Dehydratase family DK885_RS10155 PF01081 KDPG and KHG aldolase DK885_RS10160 PF02222 ATP-grasp domain DK885_RS10165 PF07130 YebG protein DK885_RS10170 PF13995 YebF-like protein DK885_RS10175 PF04391 Protein of unknown function (DUF533) DK885_RS10180 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DK885_RS10180 PF00326 Prolyl oligopeptidase family DK885_RS10185 PF00929 Exonuclease DK885_RS10190 PF00795 Carbon-nitrogen hydrolase DK885_RS10195 PF06440 DNA polymerase III, theta subunit DK885_RS10200 PF04234 CopC domain DK885_RS10205 PF05425 Copper resistance protein D DK885_RS10210 PF10709 Protein of unknown function (DUF2511) DK885_RS10215 PF00149 Calcineurin-like phosphoesterase DK885_RS10220 PF07358 Protein of unknown function (DUF1482) DK885_RS10225 PF07351 Protein of unknown function (DUF1480) DK885_RS10230 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DK885_RS10230 PF01189 16S rRNA methyltransferase RsmB/F DK885_RS10230 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DK885_RS10235 PF02470 MlaD protein DK885_RS10240 PF04403 Paraquat-inducible protein A DK885_RS10245 PF13185 GAF domain DK885_RS10250 PF17516 ProQ C-terminal domain DK885_RS10250 PF04352 ProQ/FINO family DK885_RS10255 PF11818 C-terminal domain of tail specific protease (DUF3340) DK885_RS10255 PF00595 PDZ domain DK885_RS10255 PF03572 Peptidase family S41 DK885_RS10255 PF17804 Tail specific protease N-terminal domain DK885_RS10260 PF01435 Peptidase family M48 DK885_RS10265 PF07690 Major Facilitator Superfamily DK885_RS10270 PF09339 IclR helix-turn-helix domain DK885_RS10270 PF01614 Bacterial transcriptional regulator DK885_RS10275 PF13996 YobH-like protein DK885_RS10280 PF13998 MgrB protein DK885_RS10285 PF13974 YebO-like protein DK885_RS10295 PF10736 Protein of unknown function (DUF2627) DK885_RS10300 PF00313 'Cold-shock' DNA-binding domain DK885_RS10305 PF13847 Methyltransferase domain DK885_RS10310 PF02659 Putative manganese efflux pump DK885_RS10320 PF06173 Protein of unknown function (DUF986) DK885_RS10325 PF03613 PTS system mannose/fructose/sorbose family IID component DK885_RS10330 PF03609 PTS system sorbose-specific iic component DK885_RS10335 PF03610 PTS system fructose IIA component DK885_RS10335 PF03830 PTS system sorbose subfamily IIB component DK885_RS10350 PF03741 Integral membrane protein TerC family DK885_RS10350 PF03471 Transporter associated domain DK885_RS10355 PF12792 CSS motif domain associated with EAL DK885_RS10355 PF00563 EAL domain DK885_RS10360 PF03313 Serine dehydratase alpha chain DK885_RS10360 PF03315 Serine dehydratase beta chain DK885_RS10365 PF00293 NUDIX domain DK885_RS10370 PF04715 Anthranilate synthase component I, N terminal region DK885_RS10370 PF00425 chorismate binding enzyme DK885_RS10375 PF03701 Uncharacterised protein family (UPF0181) DK885_RS10380 PF08986 Domain of unknown function (DUF1889) DK885_RS10385 PF01042 Endoribonuclease L-PSP DK885_RS10390 PF13307 Helicase C-terminal domain DK885_RS10390 PF04851 Type III restriction enzyme, res subunit DK885_RS10395 PF00814 Glycoprotease family DK885_RS10400 PF03843 Outer membrane lipoprotein Slp family DK885_RS10405 PF00501 AMP-binding enzyme DK885_RS10405 PF13193 AMP-binding enzyme C-terminal domain DK885_RS10410 PF00570 HRDC domain DK885_RS10410 PF01612 3'-5' exonuclease DK885_RS10415 PF00970 Oxidoreductase FAD-binding domain DK885_RS10415 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS10415 PF00175 Oxidoreductase NAD-binding domain DK885_RS10420 PF00355 Rieske [2Fe-2S] domain DK885_RS10420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DK885_RS10425 PF02028 BCCT, betaine/carnitine/choline family transporter DK885_RS10430 PF00180 Isocitrate/isopropylmalate dehydrogenase DK885_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS10435 PF03466 LysR substrate binding domain DK885_RS10440 PF01810 LysE type translocator DK885_RS10445 PF09313 Domain of unknown function (DUF1971) DK885_RS10450 PF08956 Domain of unknown function (DUF1869) DK885_RS10455 PF04226 Transglycosylase associated protein DK885_RS10470 PF13185 GAF domain DK885_RS10470 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS10475 PF03891 Domain of unknown function (DUF333) DK885_RS10480 PF04343 Protein of unknown function, DUF488 DK885_RS10485 PF07690 Major Facilitator Superfamily DK885_RS10490 PF12833 Helix-turn-helix domain DK885_RS10490 PF02311 AraC-like ligand binding domain DK885_RS10495 PF04284 Protein of unknown function (DUF441) DK885_RS10505 PF04073 Aminoacyl-tRNA editing domain DK885_RS10510 PF17155 Gammaproteobacterial periplasmic sensor domain DK885_RS10510 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS10515 PF17158 Membrane-associated sensor, integral membrane domain DK885_RS10515 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS10520 PF04285 Protein of unknown function (DUF444) DK885_RS10525 PF06798 PrkA serine protein kinase C-terminal domain DK885_RS10525 PF08298 PrkA AAA domain DK885_RS10530 PF06629 MltA-interacting protein MipA DK885_RS10535 PF00248 Aldo/keto reductase family DK885_RS10540 PF01263 Aldose 1-epimerase DK885_RS10545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DK885_RS10545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DK885_RS10550 PF01641 SelR domain DK885_RS10555 PF07023 Protein of unknown function (DUF1315) DK885_RS10560 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS10560 PF00107 Zinc-binding dehydrogenase DK885_RS10565 PF00083 Sugar (and other) transporter DK885_RS10570 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS10570 PF00107 Zinc-binding dehydrogenase DK885_RS10575 PF01116 Fructose-bisphosphate aldolase class-II DK885_RS10580 PF00294 pfkB family carbohydrate kinase DK885_RS10585 PF00248 Aldo/keto reductase family DK885_RS10590 PF08220 DeoR-like helix-turn-helix domain DK885_RS10590 PF00455 DeoR C terminal sensor domain DK885_RS10595 PF00083 Sugar (and other) transporter DK885_RS10600 PF00857 Isochorismatase family DK885_RS10605 PF00710 Asparaginase, N-terminal DK885_RS10605 PF17763 Glutaminase/Asparaginase C-terminal domain DK885_RS10610 PF01343 Peptidase family S49 DK885_RS10620 PF00881 Nitroreductase family DK885_RS10630 PF00586 AIR synthase related protein, N-terminal domain DK885_RS10630 PF02769 AIR synthase related protein, C-terminal domain DK885_RS10635 PF01751 Toprim domain DK885_RS10635 PF01131 DNA topoisomerase DK885_RS10640 PF06889 Protein of unknown function (DUF1266) DK885_RS10645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DK885_RS10645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DK885_RS10650 PF07383 Protein of unknown function (DUF1496) DK885_RS10655 PF00293 NUDIX domain DK885_RS10660 PF01066 CDP-alcohol phosphatidyltransferase DK885_RS10665 PF00581 Rhodanese-like domain DK885_RS10670 PF00005 ABC transporter DK885_RS10675 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS10680 PF13416 Bacterial extracellular solute-binding protein DK885_RS10685 PF02627 Carboxymuconolactone decarboxylase family DK885_RS10690 PF09335 SNARE associated Golgi protein DK885_RS10700 PF09335 SNARE associated Golgi protein DK885_RS10705 PF03372 Endonuclease/Exonuclease/phosphatase family DK885_RS10715 PF00202 Aminotransferase class-III DK885_RS10720 PF04958 Arginine N-succinyltransferase beta subunit DK885_RS10725 PF00171 Aldehyde dehydrogenase family DK885_RS10730 PF04996 Succinylarginine dihydrolase DK885_RS10735 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DK885_RS10740 PF07813 LTXXQ motif family protein DK885_RS10745 PF05962 HutD DK885_RS10755 PF02540 NAD synthase DK885_RS10760 PF04355 SmpA / OmlA family DK885_RS10770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS10775 PF02378 Phosphotransferase system, EIIC DK885_RS10780 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DK885_RS10785 PF12833 Helix-turn-helix domain DK885_RS10785 PF07883 Cupin domain DK885_RS10790 PF02056 Family 4 glycosyl hydrolase DK885_RS10790 PF11975 Family 4 glycosyl hydrolase C-terminal domain DK885_RS10795 PF04794 YdjC-like protein DK885_RS10800 PF18011 C-terminal domain found in long catalases DK885_RS10800 PF00199 Catalase DK885_RS10800 PF06628 Catalase-related immune-responsive DK885_RS10805 PF10729 Cell division activator CedA DK885_RS10815 PF00375 Sodium:dicarboxylate symporter family DK885_RS10820 PF04307 LexA-binding, inner membrane-associated putative hydrolase DK885_RS10825 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS10830 PF14002 YniB-like protein DK885_RS10835 PF03881 Fructosamine kinase DK885_RS10840 PF11080 Endoribonuclease GhoS DK885_RS10845 PF00294 pfkB family carbohydrate kinase DK885_RS10850 PF04338 Protein of unknown function, DUF481 DK885_RS10860 PF07906 ShET2 enterotoxin, N-terminal region DK885_RS10870 PF02824 TGS domain DK885_RS10870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK885_RS10870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DK885_RS10870 PF03129 Anticodon binding domain DK885_RS10875 PF05198 Translation initiation factor IF-3, N-terminal domain DK885_RS10875 PF00707 Translation initiation factor IF-3, C-terminal domain DK885_RS10880 PF01632 Ribosomal protein L35 DK885_RS10885 PF00453 Ribosomal protein L20 DK885_RS10895 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DK885_RS10895 PF01409 tRNA synthetases class II core domain (F) DK885_RS10900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DK885_RS10900 PF01588 Putative tRNA binding domain DK885_RS10900 PF03483 B3/4 domain DK885_RS10900 PF03484 tRNA synthetase B5 domain DK885_RS10900 PF03147 Ferredoxin-fold anticodon binding domain DK885_RS10905 PF00216 Bacterial DNA-binding protein DK885_RS10910 PF01032 FecCD transport family DK885_RS10915 PF00255 Glutathione peroxidase DK885_RS10920 PF00005 ABC transporter DK885_RS10925 PF00877 NlpC/P60 family DK885_RS10930 PF00563 EAL domain DK885_RS10935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DK885_RS10940 PF10636 Hemin uptake protein hemP DK885_RS10945 PF00793 DAHP synthetase I family DK885_RS10950 PF03618 Kinase/pyrophosphorylase DK885_RS10960 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DK885_RS10960 PF02896 PEP-utilising enzyme, TIM barrel domain DK885_RS10960 PF00391 PEP-utilising enzyme, mobile domain DK885_RS10965 PF00501 AMP-binding enzyme DK885_RS10965 PF13193 AMP-binding enzyme C-terminal domain DK885_RS10975 PF01494 FAD binding domain DK885_RS10980 PF00766 Electron transfer flavoprotein FAD-binding domain DK885_RS10980 PF01012 Electron transfer flavoprotein domain DK885_RS10985 PF01012 Electron transfer flavoprotein domain DK885_RS10995 PF02311 AraC-like ligand binding domain DK885_RS10995 PF12833 Helix-turn-helix domain DK885_RS11000 PF02770 Acyl-CoA dehydrogenase, middle domain DK885_RS11000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DK885_RS11000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DK885_RS11005 PF01144 Coenzyme A transferase DK885_RS11010 PF01487 Type I 3-dehydroquinase DK885_RS11015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DK885_RS11015 PF08501 Shikimate dehydrogenase substrate binding domain DK885_RS11020 PF07690 Major Facilitator Superfamily DK885_RS11025 PF07690 Major Facilitator Superfamily DK885_RS11030 PF08965 Domain of unknown function (DUF1870) DK885_RS11040 PF01594 AI-2E family transporter DK885_RS11050 PF02913 FAD linked oxidases, C-terminal domain DK885_RS11050 PF13183 4Fe-4S dicluster domain DK885_RS11050 PF01565 FAD binding domain DK885_RS11055 PF03061 Thioesterase superfamily DK885_RS11060 PF15930 Domain of unknown function DK885_RS11065 PF01521 Iron-sulphur cluster biosynthesis DK885_RS11070 PF01458 Uncharacterized protein family (UPF0051) DK885_RS11075 PF00005 ABC transporter DK885_RS11080 PF01458 Uncharacterized protein family (UPF0051) DK885_RS11085 PF00266 Aminotransferase class-V DK885_RS11090 PF02657 Fe-S metabolism associated domain DK885_RS11095 PF03734 L,D-transpeptidase catalytic domain DK885_RS11095 PF17969 L,D-transpeptidase C-terminal domain DK885_RS11095 PF01476 LysM domain DK885_RS11100 PF04728 Lipoprotein leucine-zipper DK885_RS11105 PF00224 Pyruvate kinase, barrel domain DK885_RS11105 PF02887 Pyruvate kinase, alpha/beta domain DK885_RS11110 PF10965 Protein of unknown function (DUF2767) DK885_RS11115 PF12800 4Fe-4S binding domain DK885_RS11115 PF13247 4Fe-4S dicluster domain DK885_RS11120 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DK885_RS11120 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DK885_RS11130 PF13247 4Fe-4S dicluster domain DK885_RS11135 PF01292 Prokaryotic cytochrome b561 DK885_RS11145 PF13454 FAD-NAD(P)-binding DK885_RS11150 PF08803 Putative mono-oxygenase ydhR DK885_RS11165 PF16168 Adhesin of bacterial autotransporter system, probable stalk DK885_RS11165 PF03212 Pertactin DK885_RS11170 PF01554 MatE DK885_RS11175 PF00677 Lumazine binding domain DK885_RS11185 PF07690 Major Facilitator Superfamily DK885_RS11190 PF03466 LysR substrate binding domain DK885_RS11190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS11195 PF00356 Bacterial regulatory proteins, lacI family DK885_RS11210 PF07690 Major Facilitator Superfamily DK885_RS11215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DK885_RS11215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DK885_RS11220 PF00877 NlpC/P60 family DK885_RS11225 PF00462 Glutaredoxin DK885_RS11230 PF00270 DEAD/DEAH box helicase DK885_RS11230 PF00271 Helicase conserved C-terminal domain DK885_RS11230 PF08494 DEAD/H associated DK885_RS11235 PF00929 Exonuclease DK885_RS11240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK885_RS11245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DK885_RS11250 PF16925 Tetracyclin repressor-like, C-terminal domain DK885_RS11250 PF00440 Bacterial regulatory proteins, tetR family DK885_RS11255 PF06945 Protein of unknown function (DUF1289) DK885_RS11260 PF00248 Aldo/keto reductase family DK885_RS11265 PF00080 Copper/zinc superoxide dismutase (SODC) DK885_RS11270 PF04632 Fusaric acid resistance protein family DK885_RS11275 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS11275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS11280 PF07869 Protein of unknown function (DUF1656) DK885_RS11285 PF01047 MarR family DK885_RS11290 PF05433 Glycine zipper 2TM domain DK885_RS11295 PF03702 Anhydro-N-acetylmuramic acid kinase DK885_RS11300 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DK885_RS11305 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DK885_RS11305 PF01243 Pyridoxamine 5'-phosphate oxidase DK885_RS11310 PF00579 tRNA synthetases class I (W and Y) DK885_RS11310 PF01479 S4 domain DK885_RS11315 PF08543 Phosphomethylpyrimidine kinase DK885_RS11320 PF00043 Glutathione S-transferase, C-terminal domain DK885_RS11320 PF02798 Glutathione S-transferase, N-terminal domain DK885_RS11325 PF00854 POT family DK885_RS11335 PF10576 Iron-sulfur binding domain of endonuclease III DK885_RS11335 PF00633 Helix-hairpin-helix motif DK885_RS11335 PF00730 HhH-GPD superfamily base excision DNA repair protein DK885_RS11340 PF02508 Rnf-Nqr subunit, membrane protein DK885_RS11345 PF04205 FMN-binding domain DK885_RS11350 PF03116 NQR2, RnfD, RnfE family DK885_RS11355 PF10531 SLBB domain DK885_RS11355 PF13375 RnfC Barrel sandwich hybrid domain DK885_RS11355 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DK885_RS11355 PF12838 4Fe-4S dicluster domain DK885_RS11360 PF04060 Putative Fe-S cluster DK885_RS11365 PF02508 Rnf-Nqr subunit, membrane protein DK885_RS11370 PF10754 Protein of unknown function (DUF2569) DK885_RS11375 PF05321 Haemolysin expression modulating protein DK885_RS11390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK885_RS11390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DK885_RS11395 PF00962 Adenosine/AMP deaminase DK885_RS11400 PF00155 Aminotransferase class I and II DK885_RS11405 PF02378 Phosphotransferase system, EIIC DK885_RS11405 PF00367 phosphotransferase system, EIIB DK885_RS11410 PF00356 Bacterial regulatory proteins, lacI family DK885_RS11410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DK885_RS11420 PF00440 Bacterial regulatory proteins, tetR family DK885_RS11425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DK885_RS11425 PF02837 Glycosyl hydrolases family 2, sugar binding domain DK885_RS11425 PF00703 Glycosyl hydrolases family 2 DK885_RS11435 PF03573 outer membrane porin, OprD family DK885_RS11440 PF06097 Bacterial protein of unknown function (DUF945) DK885_RS11445 PF01238 Phosphomannose isomerase type I DK885_RS11450 PF05681 Fumarate hydratase (Fumerase) DK885_RS11450 PF05683 Fumarase C-terminus DK885_RS11455 PF00206 Lyase DK885_RS11455 PF10415 Fumarase C C-terminus DK885_RS11460 PF05472 DNA replication terminus site-binding protein (Ter protein) DK885_RS11465 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS11465 PF00672 HAMP domain DK885_RS11465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS11470 PF00486 Transcriptional regulatory protein, C terminal DK885_RS11470 PF00072 Response regulator receiver domain DK885_RS11475 PF06942 GlpM protein DK885_RS11485 PF13520 Amino acid permease DK885_RS11495 PF07338 Protein of unknown function (DUF1471) DK885_RS11500 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DK885_RS11500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DK885_RS11500 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DK885_RS11505 PF02233 NAD(P) transhydrogenase beta subunit DK885_RS11510 PF01594 AI-2E family transporter DK885_RS11520 PF00893 Small Multidrug Resistance protein DK885_RS11525 PF00893 Small Multidrug Resistance protein DK885_RS11530 PF00089 Trypsin DK885_RS11550 PF07690 Major Facilitator Superfamily DK885_RS11555 PF03466 LysR substrate binding domain DK885_RS11555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS11560 PF00480 ROK family DK885_RS11570 PF00654 Voltage gated chloride channel DK885_RS11575 PF02613 Nitrate reductase delta subunit DK885_RS11580 PF04976 DMSO reductase anchor subunit (DmsC) DK885_RS11585 PF12800 4Fe-4S binding domain DK885_RS11585 PF13247 4Fe-4S dicluster domain DK885_RS11590 PF01568 Molydopterin dinucleotide binding domain DK885_RS11590 PF00384 Molybdopterin oxidoreductase DK885_RS11590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DK885_RS11595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DK885_RS11595 PF01568 Molydopterin dinucleotide binding domain DK885_RS11595 PF00384 Molybdopterin oxidoreductase DK885_RS11600 PF06649 Protein of unknown function (DUF1161) DK885_RS11605 PF06788 Uncharacterised protein family (UPF0257) DK885_RS11610 PF13302 Acetyltransferase (GNAT) domain DK885_RS11615 PF06932 Protein of unknown function (DUF1283) DK885_RS11620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DK885_RS11630 PF13378 Enolase C-terminal domain-like DK885_RS11630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DK885_RS11635 PF00107 Zinc-binding dehydrogenase DK885_RS11635 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS11645 PF12167 Arm DNA-binding domain DK885_RS11645 PF00589 Phage integrase family DK885_RS11660 PF07358 Protein of unknown function (DUF1482) DK885_RS11665 PF05358 DicB protein DK885_RS11685 PF07151 Protein of unknown function (DUF1391) DK885_RS11690 PF01381 Helix-turn-helix DK885_RS11710 PF14282 FlxA-like protein DK885_RS11720 PF04221 RelB antitoxin DK885_RS11725 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DK885_RS11730 PF01848 Hok/gef family DK885_RS11745 PF06147 Protein of unknown function (DUF968) DK885_RS11750 PF03589 Antitermination protein DK885_RS11755 PF00313 'Cold-shock' DNA-binding domain DK885_RS11760 PF00313 'Cold-shock' DNA-binding domain DK885_RS11765 PF04971 Bacteriophage P21 holin S DK885_RS11770 PF07041 Protein of unknown function (DUF1327) DK885_RS11775 PF00959 Phage lysozyme DK885_RS11780 PF10721 Protein of unknown function (DUF2514) DK885_RS11785 PF00313 'Cold-shock' DNA-binding domain DK885_RS11800 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system DK885_RS11805 PF07166 Protein of unknown function (DUF1398) DK885_RS11810 PF13132 Domain of unknown function (DUF3950) DK885_RS11820 PF07471 Phage DNA packaging protein Nu1 DK885_RS11825 PF07484 Phage Tail Collar Domain DK885_RS11825 PF03335 Phage tail fibre repeat DK885_RS11830 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DK885_RS11835 PF02796 Helix-turn-helix domain of resolvase DK885_RS11835 PF00239 Resolvase, N terminal domain DK885_RS11845 PF07690 Major Facilitator Superfamily DK885_RS11845 PF00083 Sugar (and other) transporter DK885_RS11850 PF08125 Mannitol dehydrogenase C-terminal domain DK885_RS11850 PF01232 Mannitol dehydrogenase Rossmann domain DK885_RS11855 PF14001 YdfZ protein DK885_RS11860 PF07729 FCD domain DK885_RS11860 PF00392 Bacterial regulatory proteins, gntR family DK885_RS11865 PF00106 short chain dehydrogenase DK885_RS11870 PF01432 Peptidase family M3 DK885_RS11875 PF02464 Competence-damaged protein DK885_RS11880 PF04076 Bacterial OB fold (BOF) protein DK885_RS11885 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS11895 PF07690 Major Facilitator Superfamily DK885_RS11900 PF00892 EamA-like transporter family DK885_RS11905 PF13999 MarB protein DK885_RS11910 PF12833 Helix-turn-helix domain DK885_RS11915 PF01047 MarR family DK885_RS11920 PF01914 MarC family integral membrane protein DK885_RS11925 PF07690 Major Facilitator Superfamily DK885_RS11935 PF03466 LysR substrate binding domain DK885_RS11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS11940 PF00171 Aldehyde dehydrogenase family DK885_RS11945 PF04960 Glutaminase DK885_RS11950 PF13811 Domain of unknown function (DUF4186) DK885_RS11955 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS11965 PF01232 Mannitol dehydrogenase Rossmann domain DK885_RS11965 PF08125 Mannitol dehydrogenase C-terminal domain DK885_RS11975 PF01062 Bestrophin, RFP-TM, chloride channel DK885_RS11980 PF13649 Methyltransferase domain DK885_RS11985 PF03992 Antibiotic biosynthesis monooxygenase DK885_RS11990 PF01791 DeoC/LacD family aldolase DK885_RS11995 PF13407 Periplasmic binding protein domain DK885_RS12000 PF02653 Branched-chain amino acid transport system / permease component DK885_RS12005 PF02653 Branched-chain amino acid transport system / permease component DK885_RS12010 PF00005 ABC transporter DK885_RS12015 PF04198 Putative sugar-binding domain DK885_RS12020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS12020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK885_RS12025 PF13018 Extended Signal Peptide of Type V secretion system DK885_RS12030 PF03797 Autotransporter beta-domain DK885_RS12035 PF01381 Helix-turn-helix DK885_RS12040 PF13657 HipA N-terminal domain DK885_RS12040 PF07804 HipA-like C-terminal domain DK885_RS12060 PF00419 Fimbrial protein DK885_RS12065 PF00419 Fimbrial protein DK885_RS12070 PF09160 FimH, mannose binding DK885_RS12075 PF00384 Molybdopterin oxidoreductase DK885_RS12080 PF17073 Two-component-system connector protein DK885_RS12085 PF12833 Helix-turn-helix domain DK885_RS12090 PF00884 Sulfatase DK885_RS12095 PF04055 Radical SAM superfamily DK885_RS12095 PF13186 Iron-sulfur cluster-binding domain DK885_RS12100 PF00005 ABC transporter DK885_RS12100 PF06472 ABC transporter transmembrane region 2 DK885_RS12105 PF07715 TonB-dependent Receptor Plug Domain DK885_RS12110 PF00675 Insulinase (Peptidase family M16) DK885_RS12110 PF05193 Peptidase M16 inactive domain DK885_RS12115 PF00282 Pyridoxal-dependent decarboxylase conserved domain DK885_RS12120 PF13520 Amino acid permease DK885_RS12125 PF02638 Glycosyl hydrolase-like 10 DK885_RS12130 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS12135 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS12135 PF00563 EAL domain DK885_RS12135 PF13426 PAS domain DK885_RS12140 PF01427 D-ala-D-ala dipeptidase DK885_RS12145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS12155 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS12155 PF12911 N-terminal TM domain of oligopeptide transport permease C DK885_RS12160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS12160 PF00005 ABC transporter DK885_RS12165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS12165 PF00005 ABC transporter DK885_RS12170 PF02566 OsmC-like protein DK885_RS12180 PF10684 Putative biofilm-dependent modulation protein DK885_RS12185 PF08136 30S ribosomal protein subunit S22 family DK885_RS12190 PF03949 Malic enzyme, NAD binding domain DK885_RS12190 PF00390 Malic enzyme, N-terminal domain DK885_RS12195 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS12195 PF00107 Zinc-binding dehydrogenase DK885_RS12200 PF01381 Helix-turn-helix DK885_RS12205 PF01292 Prokaryotic cytochrome b561 DK885_RS12210 PF13247 4Fe-4S dicluster domain DK885_RS12210 PF12800 4Fe-4S binding domain DK885_RS12210 PF09163 Formate dehydrogenase N, transmembrane DK885_RS12220 PF00892 EamA-like transporter family DK885_RS12225 PF00267 Gram-negative porin DK885_RS12235 PF07690 Major Facilitator Superfamily DK885_RS12240 PF00384 Molybdopterin oxidoreductase DK885_RS12240 PF01568 Molydopterin dinucleotide binding domain DK885_RS12240 PF14710 Respiratory nitrate reductase alpha N-terminal DK885_RS12245 PF13247 4Fe-4S dicluster domain DK885_RS12245 PF14711 Respiratory nitrate reductase beta C-terminal DK885_RS12250 PF02613 Nitrate reductase delta subunit DK885_RS12255 PF02665 Nitrate reductase gamma subunit DK885_RS12260 PF02567 Phenazine biosynthesis-like protein DK885_RS12265 PF00797 N-acetyltransferase DK885_RS12270 PF01613 Flavin reductase like domain DK885_RS12275 PF01361 Tautomerase enzyme DK885_RS12280 PF13808 DDE_Tnp_1-associated DK885_RS12280 PF01609 Transposase DDE domain DK885_RS12295 PF03527 RHS protein DK885_RS12305 PF17520 Family of unknown function (DUF5445) DK885_RS12310 PF13417 Glutathione S-transferase, N-terminal domain DK885_RS12315 PF00324 Amino acid permease DK885_RS12335 PF07715 TonB-dependent Receptor Plug Domain DK885_RS12335 PF00593 TonB dependent receptor DK885_RS12340 PF07729 FCD domain DK885_RS12340 PF00392 Bacterial regulatory proteins, gntR family DK885_RS12345 PF16884 N-terminal domain of oxidoreductase DK885_RS12345 PF00107 Zinc-binding dehydrogenase DK885_RS12355 PF00583 Acetyltransferase (GNAT) family DK885_RS12360 PF04657 Putative inner membrane exporter, YdcZ DK885_RS12365 PF10735 Protein of unknown function (DUF2526) DK885_RS12370 PF10753 Toxin GhoT_OrtT DK885_RS12385 PF00171 Aldehyde dehydrogenase family DK885_RS12390 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS12400 PF00005 ABC transporter DK885_RS12400 PF08402 TOBE domain DK885_RS12405 PF13416 Bacterial extracellular solute-binding protein DK885_RS12410 PF00392 Bacterial regulatory proteins, gntR family DK885_RS12410 PF00155 Aminotransferase class I and II DK885_RS12415 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DK885_RS12415 PF01381 Helix-turn-helix DK885_RS12420 PF07927 HicA toxin of bacterial toxin-antitoxin, DK885_RS12425 PF10829 Protein of unknown function (DUF2554) DK885_RS12430 PF12392 Collagenase DK885_RS12430 PF01136 Peptidase family U32 DK885_RS12435 PF01381 Helix-turn-helix DK885_RS12435 PF07883 Cupin domain DK885_RS12440 PF03594 Benzoate membrane transport protein DK885_RS12445 PF01385 Probable transposase DK885_RS12445 PF07282 Putative transposase DNA-binding domain DK885_RS12445 PF12323 Helix-turn-helix domain DK885_RS12455 PF11769 Protein of unknown function (DUF3313) DK885_RS12460 PF03848 Tellurite resistance protein TehB DK885_RS12465 PF03595 Voltage-dependent anion channel DK885_RS12470 PF18836 Beta solenoid repeat from YDCK DK885_RS12475 PF13302 Acetyltransferase (GNAT) domain DK885_RS12480 PF04325 Protein of unknown function (DUF465) DK885_RS12490 PF04349 Periplasmic glucan biosynthesis protein, MdoG DK885_RS12500 PF07063 Domain of unknown function (DUF1338) DK885_RS12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS12505 PF03466 LysR substrate binding domain DK885_RS12510 PF00672 HAMP domain DK885_RS12510 PF02203 Tar ligand binding domain homologue DK885_RS12510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DK885_RS12515 PF01848 Hok/gef family DK885_RS12525 PF01292 Prokaryotic cytochrome b561 DK885_RS12530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DK885_RS12530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DK885_RS12545 PF00171 Aldehyde dehydrogenase family DK885_RS12550 PF02698 DUF218 domain DK885_RS12555 PF00270 DEAD/DEAH box helicase DK885_RS12555 PF11898 Domain of unknown function (DUF3418) DK885_RS12555 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DK885_RS12555 PF00271 Helicase conserved C-terminal domain DK885_RS12555 PF04408 Helicase associated domain (HA2) DK885_RS12560 PF02525 Flavodoxin-like fold DK885_RS12565 PF00782 Dual specificity phosphatase, catalytic domain DK885_RS12570 PF12147 Putative methyltransferase DK885_RS12570 PF12146 Serine aminopeptidase, S33 DK885_RS12580 PF01066 CDP-alcohol phosphatidyltransferase DK885_RS12585 PF10971 Protein of unknown function (DUF2773) DK885_RS12590 PF00248 Aldo/keto reductase family DK885_RS12605 PF13936 Helix-turn-helix domain DK885_RS12605 PF00665 Integrase core domain DK885_RS12625 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS12630 PF08223 PaaX-like protein C-terminal domain DK885_RS12630 PF07848 PaaX-like protein DK885_RS12635 PF00501 AMP-binding enzyme DK885_RS12635 PF14535 AMP-binding enzyme C-terminal domain DK885_RS12640 PF00108 Thiolase, N-terminal domain DK885_RS12640 PF02803 Thiolase, C-terminal domain DK885_RS12645 PF03061 Thioesterase superfamily DK885_RS12650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DK885_RS12650 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DK885_RS12650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DK885_RS12655 PF00378 Enoyl-CoA hydratase/isomerase DK885_RS12660 PF00378 Enoyl-CoA hydratase/isomerase DK885_RS12665 PF00175 Oxidoreductase NAD-binding domain DK885_RS12665 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS12665 PF00970 Oxidoreductase FAD-binding domain DK885_RS12670 PF01883 Iron-sulfur cluster assembly protein DK885_RS12675 PF05138 Phenylacetic acid catabolic protein DK885_RS12680 PF06243 Phenylacetic acid degradation B DK885_RS12685 PF05138 Phenylacetic acid catabolic protein DK885_RS12690 PF00171 Aldehyde dehydrogenase family DK885_RS12690 PF01575 MaoC like domain DK885_RS12695 PF01179 Copper amine oxidase, enzyme domain DK885_RS12695 PF02728 Copper amine oxidase, N3 domain DK885_RS12695 PF02727 Copper amine oxidase, N2 domain DK885_RS12695 PF07833 Copper amine oxidase N-terminal domain DK885_RS12700 PF00171 Aldehyde dehydrogenase family DK885_RS12705 PF14525 AraC-binding-like domain DK885_RS12705 PF12833 Helix-turn-helix domain DK885_RS12710 PF07027 Protein of unknown function (DUF1318) DK885_RS12715 PF13617 YnbE-like lipoprotein DK885_RS12720 PF11739 Dicarboxylate transport DK885_RS12725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DK885_RS12725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DK885_RS12730 PF03724 META domain DK885_RS12735 PF03891 Domain of unknown function (DUF333) DK885_RS12740 PF10371 Domain of unknown function DK885_RS12740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DK885_RS12740 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DK885_RS12740 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DK885_RS12740 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DK885_RS12750 PF00267 Gram-negative porin DK885_RS12755 PF00582 Universal stress protein family DK885_RS12765 PF02796 Helix-turn-helix domain of resolvase DK885_RS12765 PF00239 Resolvase, N terminal domain DK885_RS12770 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DK885_RS12775 PF07484 Phage Tail Collar Domain DK885_RS12775 PF08400 Prophage tail fibre N-terminal DK885_RS12775 PF03335 Phage tail fibre repeat DK885_RS12780 PF13505 Outer membrane protein beta-barrel domain DK885_RS12785 PF05598 Transposase domain (DUF772) DK885_RS12785 PF01609 Transposase DDE domain DK885_RS12795 PF06316 Enterobacterial Ail/Lom protein DK885_RS12815 PF02195 ParB-like nuclease domain DK885_RS12825 PF02386 Cation transport protein DK885_RS12830 PF06085 Lipoprotein Rz1 precursor DK885_RS12840 PF01695 IstB-like ATP binding protein DK885_RS12845 PF07120 Protein of unknown function (DUF1376) DK885_RS12850 PF06254 Putative bacterial toxin ydaT DK885_RS12855 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DK885_RS12870 PF07151 Protein of unknown function (DUF1391) DK885_RS12875 PF14163 Super-infection exclusion protein B DK885_RS12890 PF04181 Rtr1/RPAP2 family DK885_RS12900 PF06630 Enterobacterial exodeoxyribonuclease VIII DK885_RS12900 PF12684 PDDEXK-like domain of unknown function (DUF3799) DK885_RS12905 PF03837 RecT family DK885_RS12915 PF06688 Protein of unknown function (DUF1187) DK885_RS12920 PF06806 Putative excisionase (DUF1233) DK885_RS12925 PF00589 Phage integrase family DK885_RS12925 PF12167 Arm DNA-binding domain DK885_RS12930 PF01171 PP-loop family DK885_RS12935 PF00271 Helicase conserved C-terminal domain DK885_RS12935 PF00270 DEAD/DEAH box helicase DK885_RS12935 PF03880 DbpA RNA binding domain DK885_RS12945 PF01544 CorA-like Mg2+ transporter protein DK885_RS12950 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS12950 PF08448 PAS fold DK885_RS12955 PF01713 Smr domain DK885_RS12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS12965 PF03466 LysR substrate binding domain DK885_RS12970 PF01546 Peptidase family M20/M25/M40 DK885_RS12970 PF07687 Peptidase dimerisation domain DK885_RS12975 PF01546 Peptidase family M20/M25/M40 DK885_RS12985 PF03806 AbgT putative transporter family DK885_RS12990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DK885_RS12990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DK885_RS12995 PF00027 Cyclic nucleotide-binding domain DK885_RS12995 PF00325 Bacterial regulatory proteins, crp family DK885_RS13000 PF00582 Universal stress protein family DK885_RS13005 PF10749 Protein of unknown function (DUF2534) DK885_RS13010 PF05598 Transposase domain (DUF772) DK885_RS13010 PF01609 Transposase DDE domain DK885_RS13015 PF00924 Mechanosensitive ion channel DK885_RS13020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS13025 PF03466 LysR substrate binding domain DK885_RS13030 PF12146 Serine aminopeptidase, S33 DK885_RS13040 PF00246 Zinc carboxypeptidase DK885_RS13045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DK885_RS13045 PF13378 Enolase C-terminal domain-like DK885_RS13050 PF08534 Redoxin DK885_RS13055 PF00158 Sigma-54 interaction domain DK885_RS13055 PF13188 PAS domain DK885_RS13055 PF18024 Helix-turn-helix domain DK885_RS13060 PF05128 Domain of unknown function (DUF697) DK885_RS13065 PF04317 YcjX-like family, DUF463 DK885_RS13070 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DK885_RS13070 PF00356 Bacterial regulatory proteins, lacI family DK885_RS13075 PF09381 Outer membrane protein G (OmpG) DK885_RS13085 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS13090 PF03633 Glycosyl hydrolase family 65, C-terminal domain DK885_RS13090 PF03636 Glycosyl hydrolase family 65, N-terminal domain DK885_RS13090 PF03632 Glycosyl hydrolase family 65 central catalytic domain DK885_RS13095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK885_RS13095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DK885_RS13100 PF01261 Xylose isomerase-like TIM barrel DK885_RS13105 PF00107 Zinc-binding dehydrogenase DK885_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS13120 PF01547 Bacterial extracellular solute-binding protein DK885_RS13125 PF00128 Alpha amylase, catalytic domain DK885_RS13130 PF00581 Rhodanese-like domain DK885_RS13135 PF09584 Phage shock protein PspD (Phageshock_PspD) DK885_RS13140 PF04024 PspC domain DK885_RS13145 PF06667 Phage shock protein B DK885_RS13150 PF04012 PspA/IM30 family DK885_RS13155 PF00158 Sigma-54 interaction domain DK885_RS13155 PF02954 Bacterial regulatory protein, Fis family DK885_RS13160 PF00202 Aminotransferase class-III DK885_RS13165 PF01266 FAD dependent oxidoreductase DK885_RS13170 PF00171 Aldehyde dehydrogenase family DK885_RS13180 PF01381 Helix-turn-helix DK885_RS13180 PF07883 Cupin domain DK885_RS13185 PF07722 Peptidase C26 DK885_RS13190 PF00120 Glutamine synthetase, catalytic domain DK885_RS13195 PF00324 Amino acid permease DK885_RS13200 PF10820 Protein of unknown function (DUF2543) DK885_RS13210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS13215 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS13220 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS13220 PF12911 N-terminal TM domain of oligopeptide transport permease C DK885_RS13225 PF00005 ABC transporter DK885_RS13225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS13230 PF00005 ABC transporter DK885_RS13235 PF04480 Protein of unknown function (DUF559) DK885_RS13250 PF00575 S1 RNA binding domain DK885_RS13250 PF00773 RNB domain DK885_RS13250 PF17876 Cold shock domain DK885_RS13250 PF08206 Ribonuclease B OB domain DK885_RS13260 PF00563 EAL domain DK885_RS13260 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS13260 PF13426 PAS domain DK885_RS13270 PF08220 DeoR-like helix-turn-helix domain DK885_RS13270 PF00455 DeoR C terminal sensor domain DK885_RS13275 PF05433 Glycine zipper 2TM domain DK885_RS13280 PF01253 Translation initiation factor SUI1 DK885_RS13285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DK885_RS13290 PF18073 Rubredoxin metal binding domain DK885_RS13295 PF06305 Lipopolysaccharide assembly protein A domain DK885_RS13300 PF01569 PAP2 superfamily DK885_RS13305 PF00925 GTP cyclohydrolase II DK885_RS13310 PF00330 Aconitase family (aconitate hydratase) DK885_RS13310 PF00694 Aconitase C-terminal domain DK885_RS13330 PF03466 LysR substrate binding domain DK885_RS13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS13340 PF01396 Topoisomerase DNA binding C4 zinc finger DK885_RS13340 PF01751 Toprim domain DK885_RS13340 PF08272 Topoisomerase I zinc-ribbon-like DK885_RS13340 PF01131 DNA topoisomerase DK885_RS13350 PF10692 Protein of unknown function (DUF2498) DK885_RS13355 PF08496 Peptidase family S49 N-terminal DK885_RS13355 PF01343 Peptidase family S49 DK885_RS13360 PF00106 short chain dehydrogenase DK885_RS13365 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DK885_RS13365 PF12557 Cob(I)alamin adenosyltransferase N terminal DK885_RS13370 PF01479 S4 domain DK885_RS13370 PF00849 RNA pseudouridylate synthase DK885_RS13375 PF09972 Predicted membrane protein (DUF2207) DK885_RS13380 PF01300 Telomere recombination DK885_RS13385 PF02811 PHP domain DK885_RS13390 PF08255 Trp-operon Leader Peptide DK885_RS13395 PF04715 Anthranilate synthase component I, N terminal region DK885_RS13395 PF00425 chorismate binding enzyme DK885_RS13400 PF00117 Glutamine amidotransferase class-I DK885_RS13400 PF02885 Glycosyl transferase family, helical bundle domain DK885_RS13400 PF00591 Glycosyl transferase family, a/b domain DK885_RS13405 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DK885_RS13405 PF00218 Indole-3-glycerol phosphate synthase DK885_RS13410 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS13415 PF00290 Tryptophan synthase alpha chain DK885_RS13420 PF10685 Stress-induced bacterial acidophilic repeat motif DK885_RS13425 PF05974 Domain of unknown function (DUF892) DK885_RS13430 PF05974 Domain of unknown function (DUF892) DK885_RS13435 PF03922 OmpW family DK885_RS13450 PF04279 Intracellular septation protein A DK885_RS13455 PF03061 Thioesterase superfamily DK885_RS13460 PF03544 Gram-negative bacterial TonB protein C-terminal DK885_RS13465 PF03795 YCII-related domain DK885_RS13470 PF02254 TrkA-N domain DK885_RS13470 PF07885 Ion channel DK885_RS13480 PF13091 PLD-like domain DK885_RS13480 PF13396 Phospholipase_D-nuclease N-terminal DK885_RS13485 PF04269 Protein of unknown function, DUF440 DK885_RS13490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS13490 PF00005 ABC transporter DK885_RS13495 PF00005 ABC transporter DK885_RS13495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS13500 PF12911 N-terminal TM domain of oligopeptide transport permease C DK885_RS13500 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS13505 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS13510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS13520 PF01914 MarC family integral membrane protein DK885_RS13525 PF00171 Aldehyde dehydrogenase family DK885_RS13525 PF00465 Iron-containing alcohol dehydrogenase DK885_RS13535 PF00265 Thymidine kinase DK885_RS13540 PF00816 H-NS histone family DK885_RS13545 PF00483 Nucleotidyl transferase DK885_RS13550 PF00072 Response regulator receiver domain DK885_RS13555 PF01734 Patatin-like phospholipase DK885_RS13560 PF02810 SEC-C motif DK885_RS13565 PF01842 ACT domain DK885_RS13565 PF00551 Formyl transferase DK885_RS13600 PF02665 Nitrate reductase gamma subunit DK885_RS13605 PF02613 Nitrate reductase delta subunit DK885_RS13610 PF14711 Respiratory nitrate reductase beta C-terminal DK885_RS13610 PF13247 4Fe-4S dicluster domain DK885_RS13615 PF01568 Molydopterin dinucleotide binding domain DK885_RS13615 PF14710 Respiratory nitrate reductase alpha N-terminal DK885_RS13615 PF00384 Molybdopterin oxidoreductase DK885_RS13620 PF07690 Major Facilitator Superfamily DK885_RS13630 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DK885_RS13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS13630 PF07730 Histidine kinase DK885_RS13630 PF00672 HAMP domain DK885_RS13635 PF00072 Response regulator receiver domain DK885_RS13635 PF00196 Bacterial regulatory proteins, luxR family DK885_RS13640 PF11924 Inverse autotransporter, beta-domain DK885_RS13645 PF02635 DsrE/DsrF-like family DK885_RS13650 PF04752 ChaC-like protein DK885_RS13655 PF06150 ChaB DK885_RS13660 PF01699 Sodium/calcium exchanger protein DK885_RS13665 PF13940 Toxin Ldr, type I toxin-antitoxin system DK885_RS13670 PF13940 Toxin Ldr, type I toxin-antitoxin system DK885_RS13680 PF13940 Toxin Ldr, type I toxin-antitoxin system DK885_RS13685 PF00793 DAHP synthetase I family DK885_RS13690 PF13369 Transglutaminase-like superfamily DK885_RS13695 PF04247 Invasion gene expression up-regulator, SirB DK885_RS13700 PF17827 PrmC N-terminal domain DK885_RS13700 PF13847 Methyltransferase domain DK885_RS13705 PF00472 RF-1 domain DK885_RS13705 PF03462 PCRF domain DK885_RS13710 PF01488 Shikimate / quinate 5-dehydrogenase DK885_RS13710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DK885_RS13710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DK885_RS13715 PF03550 Outer membrane lipoprotein LolB DK885_RS13720 PF08544 GHMP kinases C terminal DK885_RS13720 PF00288 GHMP kinases N terminal domain DK885_RS13730 PF14572 Phosphoribosyl synthetase-associated domain DK885_RS13730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DK885_RS13740 PF01740 STAS domain DK885_RS13740 PF00916 Sulfate permease family DK885_RS13745 PF10762 Protein of unknown function (DUF2583) DK885_RS13750 PF01195 Peptidyl-tRNA hydrolase DK885_RS13755 PF01926 50S ribosome-binding GTPase DK885_RS13755 PF06071 Protein of unknown function (DUF933) DK885_RS13770 PF03797 Autotransporter beta-domain DK885_RS13770 PF03212 Pertactin DK885_RS13775 PF00989 PAS fold DK885_RS13775 PF02954 Bacterial regulatory protein, Fis family DK885_RS13775 PF00158 Sigma-54 interaction domain DK885_RS13780 PF02733 Dak1 domain DK885_RS13785 PF02734 DAK2 domain DK885_RS13790 PF00391 PEP-utilising enzyme, mobile domain DK885_RS13790 PF05524 PEP-utilising enzyme, N-terminal DK885_RS13790 PF00381 PTS HPr component phosphorylation site DK885_RS13790 PF03610 PTS system fructose IIA component DK885_RS13800 PF01204 Trehalase DK885_RS13810 PF04226 Transglycosylase associated protein DK885_RS13815 PF07238 PilZ domain DK885_RS13815 PF07317 Flagellar regulator YcgR DK885_RS13820 PF01464 Transglycosylase SLT domain DK885_RS13830 PF17676 LD-carboxypeptidase C-terminal domain DK885_RS13830 PF02016 LD-carboxypeptidase N-terminal domain DK885_RS13835 PF02080 TrkA-C domain DK885_RS13835 PF00999 Sodium/hydrogen exchanger family DK885_RS13835 PF03471 Transporter associated domain DK885_RS13845 PF01168 Alanine racemase, N-terminal domain DK885_RS13845 PF00842 Alanine racemase, C-terminal domain DK885_RS13850 PF01266 FAD dependent oxidoreductase DK885_RS13855 PF04293 SpoVR like protein DK885_RS13860 PF00392 Bacterial regulatory proteins, gntR family DK885_RS13860 PF07840 FadR C-terminal domain DK885_RS13865 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DK885_RS13870 PF02600 Disulfide bond formation protein DsbB DK885_RS13875 PF00817 impB/mucB/samB family DK885_RS13875 PF11799 impB/mucB/samB family C-terminal domain DK885_RS13875 PF13438 Domain of unknown function (DUF4113) DK885_RS13875 PF11798 IMS family HHH motif DK885_RS13880 PF00717 Peptidase S24-like DK885_RS13885 PF06109 Haemolysin E (HlyE) DK885_RS13890 PF03692 Putative zinc- or iron-chelating domain DK885_RS13895 PF01557 Fumarylacetoacetate (FAA) hydrolase family DK885_RS13900 PF05166 YcgL domain DK885_RS13905 PF04151 Bacterial pre-peptidase C-terminal domain DK885_RS13910 PF05666 Fels-1 Prophage Protein-like DK885_RS13920 PF03775 Septum formation inhibitor MinC, C-terminal domain DK885_RS13920 PF05209 Septum formation inhibitor MinC, N-terminal domain DK885_RS13925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DK885_RS13930 PF03776 Septum formation topological specificity factor MinE DK885_RS13955 PF13436 Glycine-zipper domain DK885_RS13960 PF16456 YmgD protein DK885_RS13970 PF03797 Autotransporter beta-domain DK885_RS13985 PF12792 CSS motif domain associated with EAL DK885_RS13985 PF00563 EAL domain DK885_RS13995 PF10798 Biofilm development protein YmgB/AriR DK885_RS14005 PF10798 Biofilm development protein YmgB/AriR DK885_RS14010 PF00563 EAL domain DK885_RS14010 PF04940 Sensors of blue-light using FAD DK885_RS14015 PF13411 MerR HTH family regulatory protein DK885_RS14020 PF07166 Protein of unknown function (DUF1398) DK885_RS14030 PF00180 Isocitrate/isopropylmalate dehydrogenase DK885_RS14035 PF01844 HNH endonuclease DK885_RS14040 PF00239 Resolvase, N terminal domain DK885_RS14040 PF02796 Helix-turn-helix domain of resolvase DK885_RS14045 PF07484 Phage Tail Collar Domain DK885_RS14050 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DK885_RS14055 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DK885_RS14065 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) DK885_RS14070 PF04865 Baseplate J-like protein DK885_RS14075 PF04860 Phage portal protein DK885_RS14085 PF03354 Phage Terminase DK885_RS14100 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DK885_RS14105 PF00717 Peptidase S24-like DK885_RS14130 PF07825 Excisionase-like protein DK885_RS14135 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain DK885_RS14135 PF00589 Phage integrase family DK885_RS14140 PF10463 Peptidase U49 DK885_RS14150 PF08242 Methyltransferase domain DK885_RS14155 PF00180 Isocitrate/isopropylmalate dehydrogenase DK885_RS14160 PF00849 RNA pseudouridylate synthase DK885_RS14165 PF00293 NUDIX domain DK885_RS14175 PF04356 Protein of unknown function (DUF489) DK885_RS14180 PF00206 Lyase DK885_RS14180 PF08328 Adenylosuccinate lyase C-terminal DK885_RS14185 PF00486 Transcriptional regulatory protein, C terminal DK885_RS14185 PF00072 Response regulator receiver domain DK885_RS14190 PF08918 PhoQ Sensor DK885_RS14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS14195 PF08007 Cupin superfamily protein DK885_RS14200 PF01546 Peptidase family M20/M25/M40 DK885_RS14200 PF07687 Peptidase dimerisation domain DK885_RS14210 PF00005 ABC transporter DK885_RS14210 PF08402 TOBE domain DK885_RS14215 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS14220 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS14225 PF13416 Bacterial extracellular solute-binding protein DK885_RS14230 PF12158 Protein of unknown function (DUF3592) DK885_RS14235 PF04536 TPM domain DK885_RS14240 PF02146 Sir2 family DK885_RS14245 PF00480 ROK family DK885_RS14250 PF02687 FtsX-like permease family DK885_RS14250 PF12704 MacB-like periplasmic core domain DK885_RS14255 PF00005 ABC transporter DK885_RS14260 PF02687 FtsX-like permease family DK885_RS14260 PF12704 MacB-like periplasmic core domain DK885_RS14265 PF01757 Acyltransferase family DK885_RS14270 PF00271 Helicase conserved C-terminal domain DK885_RS14270 PF00270 DEAD/DEAH box helicase DK885_RS14270 PF03461 TRCF domain DK885_RS14270 PF17757 UvrB interaction domain DK885_RS14270 PF02559 CarD-like/TRCF domain DK885_RS14275 PF03734 L,D-transpeptidase catalytic domain DK885_RS14275 PF17969 L,D-transpeptidase C-terminal domain DK885_RS14275 PF01476 LysM domain DK885_RS14280 PF07338 Protein of unknown function (DUF1471) DK885_RS14285 PF00440 Bacterial regulatory proteins, tetR family DK885_RS14290 PF05433 Glycine zipper 2TM domain DK885_RS14295 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS14300 PF05728 Uncharacterised protein family (UPF0227) DK885_RS14305 PF00933 Glycosyl hydrolase family 3 N terminal domain DK885_RS14310 PF01636 Phosphotransferase enzyme family DK885_RS14315 PF13036 Peptidoglycan-synthase activator LpoB DK885_RS14320 PF07233 Protein of unknown function (DUF1425) DK885_RS14325 PF01230 HIT domain DK885_RS14330 PF07715 TonB-dependent Receptor Plug Domain DK885_RS14330 PF00593 TonB dependent receptor DK885_RS14335 PF00367 phosphotransferase system, EIIB DK885_RS14335 PF02378 Phosphotransferase system, EIIC DK885_RS14340 PF01026 TatD related DNase DK885_RS14345 PF09115 DNA polymerase III, delta subunit, C terminal DK885_RS14350 PF02223 Thymidylate kinase DK885_RS14355 PF02618 YceG-like family DK885_RS14360 PF01063 Amino-transferase class IV DK885_RS14365 PF00109 Beta-ketoacyl synthase, N-terminal domain DK885_RS14365 PF02801 Beta-ketoacyl synthase, C-terminal domain DK885_RS14370 PF00550 Phosphopantetheine attachment site DK885_RS14380 PF00698 Acyl transferase domain DK885_RS14390 PF02504 Fatty acid synthesis protein DK885_RS14395 PF01783 Ribosomal L32p protein family DK885_RS14400 PF02620 Large ribosomal RNA subunit accumulation protein YceD DK885_RS14405 PF02545 Maf-like protein DK885_RS14410 PF00849 RNA pseudouridylate synthase DK885_RS14410 PF01479 S4 domain DK885_RS14420 PF00575 S1 RNA binding domain DK885_RS14420 PF10150 Ribonuclease E/G family DK885_RS14420 PF12111 Polyribonucleotide phosphorylase C terminal DK885_RS14425 PF00669 Bacterial flagellin N-terminal helical region DK885_RS14430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DK885_RS14430 PF00460 Flagella basal body rod protein DK885_RS14435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK885_RS14435 PF10135 Rod binding protein DK885_RS14440 PF02119 Flagellar P-ring protein DK885_RS14445 PF02107 Flagellar L-ring protein DK885_RS14450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DK885_RS14450 PF00460 Flagella basal body rod protein DK885_RS14455 PF00460 Flagella basal body rod protein DK885_RS14455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DK885_RS14460 PF00460 Flagella basal body rod protein DK885_RS14460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DK885_RS14460 PF07559 Flagellar basal body protein FlaE DK885_RS14465 PF13860 FlgD Ig-like domain DK885_RS14465 PF13861 FlgD Tudor-like domain DK885_RS14465 PF03963 Flagellar hook capping protein - N-terminal region DK885_RS14470 PF00460 Flagella basal body rod protein DK885_RS14470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DK885_RS14475 PF00460 Flagella basal body rod protein DK885_RS14480 PF13144 Chaperone for flagella basal body P-ring formation DK885_RS14485 PF04316 Anti-sigma-28 factor, FlgM DK885_RS14490 PF05130 FlgN protein DK885_RS14495 PF03023 Lipid II flippase MurJ DK885_RS14500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK885_RS14505 PF04337 Protein of unknown function, DUF480 DK885_RS14510 PF13302 Acetyltransferase (GNAT) domain DK885_RS14515 PF07690 Major Facilitator Superfamily DK885_RS14520 PF13417 Glutathione S-transferase, N-terminal domain DK885_RS14520 PF04399 Glutaredoxin 2, C terminal domain DK885_RS14525 PF07273 Protein of unknown function (DUF1439) DK885_RS14530 PF01979 Amidohydrolase family DK885_RS14535 PF06183 DinI-like family DK885_RS14545 PF13991 BssS protein family DK885_RS14550 PF01266 FAD dependent oxidoreductase DK885_RS14555 PF10968 Protein of unknown function (DUF2770) DK885_RS14560 PF01292 Prokaryotic cytochrome b561 DK885_RS14565 PF04264 YceI-like domain DK885_RS14570 PF17773 UPF0176 acylphosphatase like domain DK885_RS14570 PF00581 Rhodanese-like domain DK885_RS14570 PF12368 Rhodanase C-terminal DK885_RS14575 PF03279 Bacterial lipid A biosynthesis acyltransferase DK885_RS14580 PF07690 Major Facilitator Superfamily DK885_RS14585 PF13984 MsyB protein DK885_RS14590 PF07119 Protein of unknown function (DUF1375) DK885_RS14595 PF00535 Glycosyl transferase family 2 DK885_RS14600 PF04349 Periplasmic glucan biosynthesis protein, MdoG DK885_RS14615 PF01757 Acyltransferase family DK885_RS14620 PF13091 PLD-like domain DK885_RS14625 PF01661 Macro domain DK885_RS14635 PF10610 Thin aggregative fimbriae synthesis protein DK885_RS14640 PF07012 Curlin associated repeat DK885_RS14645 PF07012 Curlin associated repeat DK885_RS14660 PF00196 Bacterial regulatory proteins, luxR family DK885_RS14665 PF10627 Curli assembly protein CsgE DK885_RS14670 PF10614 Type VIII secretion system (T8SS), CsgF protein DK885_RS14675 PF03783 Curli production assembly/transport component CsgG DK885_RS14680 PF06496 Protein of unknown function (DUF1097) DK885_RS14685 PF02613 Nitrate reductase delta subunit DK885_RS14690 PF02811 PHP domain DK885_RS14695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DK885_RS14740 PF17158 Membrane-associated sensor, integral membrane domain DK885_RS14740 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS14750 PF01522 Polysaccharide deacetylase DK885_RS14750 PF14883 Hypothetical glycosyl hydrolase family 13 DK885_RS14755 PF00535 Glycosyl transferase family 2 DK885_RS14760 PF13994 PgaD-like protein DK885_RS14765 PF02562 PhoH-like protein DK885_RS14770 PF04261 Dyp-type peroxidase family DK885_RS14775 PF09375 Imelysin DK885_RS14775 PF13473 Cupredoxin-like domain DK885_RS14780 PF03239 Iron permease FTR1 family DK885_RS14785 PF03239 Iron permease FTR1 family DK885_RS14800 PF00474 Sodium:solute symporter family DK885_RS14815 PF00171 Aldehyde dehydrogenase family DK885_RS14815 PF14850 DNA-binding domain of Proline dehydrogenase DK885_RS14815 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DK885_RS14815 PF01619 Proline dehydrogenase DK885_RS14820 PF00440 Bacterial regulatory proteins, tetR family DK885_RS14820 PF08362 YcdC-like protein, C-terminal region DK885_RS14825 PF00296 Luciferase-like monooxygenase DK885_RS14830 PF00857 Isochorismatase family DK885_RS14835 PF01042 Endoribonuclease L-PSP DK885_RS14840 PF12697 Alpha/beta hydrolase family DK885_RS14845 PF00881 Nitroreductase family DK885_RS14850 PF01613 Flavin reductase like domain DK885_RS14855 PF00860 Permease family DK885_RS14860 PF10685 Stress-induced bacterial acidophilic repeat motif DK885_RS14870 PF03358 NADPH-dependent FMN reductase DK885_RS14875 PF13993 YccJ-like protein DK885_RS14880 PF00328 Histidine phosphatase superfamily (branch 2) DK885_RS14890 PF00226 DnaJ domain DK885_RS14890 PF01556 DnaJ C terminal domain DK885_RS14900 PF02613 Nitrate reductase delta subunit DK885_RS14905 PF01568 Molydopterin dinucleotide binding domain DK885_RS14905 PF18364 Molybdopterin oxidoreductase N-terminal domain DK885_RS14905 PF00384 Molybdopterin oxidoreductase DK885_RS14910 PF03264 NapC/NirT cytochrome c family, N-terminal region DK885_RS14915 PF00072 Response regulator receiver domain DK885_RS14915 PF00486 Transcriptional regulatory protein, C terminal DK885_RS14920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DK885_RS14925 PF00072 Response regulator receiver domain DK885_RS14925 PF00672 HAMP domain DK885_RS14925 PF01627 Hpt domain DK885_RS14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS14925 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS14930 PF12801 4Fe-4S binding domain DK885_RS14935 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system DK885_RS14940 PF15939 Putative antitoxin of bacterial toxin-antitoxin system DK885_RS14950 PF00313 'Cold-shock' DNA-binding domain DK885_RS14955 PF00313 'Cold-shock' DNA-binding domain DK885_RS14975 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF DK885_RS14980 PF06251 Capsule biosynthesis GfcC DK885_RS14985 PF06082 Exopolysaccharide biosynthesis protein YbjH DK885_RS14990 PF02563 Polysaccharide biosynthesis/export protein DK885_RS14990 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DK885_RS14990 PF10531 SLBB domain DK885_RS14995 PF01451 Low molecular weight phosphotyrosine protein phosphatase DK885_RS15000 PF13807 G-rich domain on putative tyrosine kinase DK885_RS15000 PF13614 AAA domain DK885_RS15000 PF02706 Chain length determinant protein DK885_RS15005 PF00328 Histidine phosphatase superfamily (branch 2) DK885_RS15010 PF08173 Membrane bound YbgT-like protein DK885_RS15015 PF02322 Cytochrome bd terminal oxidase subunit II DK885_RS15020 PF01654 Cytochrome bd terminal oxidase subunit I DK885_RS15025 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DK885_RS15030 PF07449 Hydrogenase-1 expression protein HyaE DK885_RS15035 PF01750 Hydrogenase maturation protease DK885_RS15040 PF01292 Prokaryotic cytochrome b561 DK885_RS15045 PF00374 Nickel-dependent hydrogenase DK885_RS15050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DK885_RS15050 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DK885_RS15060 PF01027 Inhibitor of apoptosis-promoting Bax1 DK885_RS15065 PF04358 DsrC like protein DK885_RS15070 PF00708 Acylphosphatase DK885_RS15075 PF10672 S-adenosylmethionine-dependent methyltransferase DK885_RS15075 PF17785 PUA-like domain DK885_RS15080 PF08755 Hemimethylated DNA-binding protein YccV like DK885_RS15085 PF13380 CoA binding domain DK885_RS15090 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DK885_RS15095 PF02142 MGS-like domain DK885_RS15100 PF00580 UvrD/REP helicase N-terminal domain DK885_RS15100 PF12462 DNA helicase IV / RNA helicase N terminal DK885_RS15100 PF13361 UvrD-like helicase C-terminal domain DK885_RS15105 PF03733 Inner membrane component domain DK885_RS15110 PF12805 FUSC-like inner membrane protein yccS DK885_RS15115 PF04993 TfoX N-terminal domain DK885_RS15115 PF04994 TfoX C-terminal domain DK885_RS15120 PF03846 Cell division inhibitor SulA DK885_RS15130 PF01389 OmpA-like transmembrane domain DK885_RS15130 PF00691 OmpA family DK885_RS15135 PF06303 MatP N-terminal domain DK885_RS15135 PF17414 MatP C-terminal ribbon-helix-helix domain DK885_RS15140 PF13654 AAA domain DK885_RS15140 PF05362 Lon protease (S16) C-terminal proteolytic domain DK885_RS15145 PF07977 FabA-like domain DK885_RS15150 PF04957 Ribosome modulation factor DK885_RS15155 PF03886 ABC-type transport auxiliary lipoprotein component DK885_RS15160 PF02470 MlaD protein DK885_RS15165 PF04403 Paraquat-inducible protein A DK885_RS15170 PF12848 ABC transporter DK885_RS15170 PF16326 ABC transporter C-terminal domain DK885_RS15170 PF00005 ABC transporter DK885_RS15175 PF02926 THUMP domain DK885_RS15175 PF01170 Putative RNA methylase family UPF0020 DK885_RS15175 PF10672 S-adenosylmethionine-dependent methyltransferase DK885_RS15180 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS15180 PF03473 MOSC domain DK885_RS15180 PF03476 MOSC N-terminal beta barrel domain DK885_RS15185 PF07126 Cell-division protein ZapC DK885_RS15190 PF01180 Dihydroorotate dehydrogenase DK885_RS15195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS15195 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS15200 PF00419 Fimbrial protein DK885_RS15205 PF00419 Fimbrial protein DK885_RS15210 PF00419 Fimbrial protein DK885_RS15215 PF13954 PapC N-terminal domain DK885_RS15215 PF13953 PapC C-terminal domain DK885_RS15215 PF00577 Outer membrane usher protein DK885_RS15220 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS15220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS15225 PF00419 Fimbrial protein DK885_RS15235 PF03358 NADPH-dependent FMN reductase DK885_RS15240 PF09084 NMT1/THI5 like DK885_RS15245 PF00296 Luciferase-like monooxygenase DK885_RS15250 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15255 PF00005 ABC transporter DK885_RS15260 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DK885_RS15260 PF01433 Peptidase family M1 domain DK885_RS15260 PF11940 Domain of unknown function (DUF3458) Ig-like fold DK885_RS15265 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DK885_RS15265 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DK885_RS15270 PF01336 OB-fold nucleic acid binding domain DK885_RS15270 PF00152 tRNA synthetases class II (D, K and N) DK885_RS15275 PF00267 Gram-negative porin DK885_RS15285 PF00155 Aminotransferase class I and II DK885_RS15290 PF00753 Metallo-beta-lactamase superfamily DK885_RS15295 PF05951 Bacterial protein of unknown function (DUF882) DK885_RS15305 PF03734 L,D-transpeptidase catalytic domain DK885_RS15305 PF01471 Putative peptidoglycan binding domain DK885_RS15310 PF16330 MukB hinge domain DK885_RS15310 PF04310 MukB N-terminal DK885_RS15315 PF04288 MukE-like family DK885_RS15320 PF17192 MukF middle domain DK885_RS15320 PF17193 MukF C-terminal domain DK885_RS15320 PF03882 MukF winged-helix domain DK885_RS15325 PF13847 Methyltransferase domain DK885_RS15330 PF02698 DUF218 domain DK885_RS15335 PF01636 Phosphotransferase enzyme family DK885_RS15340 PF02348 Cytidylyltransferase DK885_RS15345 PF03966 Trm112p-like protein DK885_RS15350 PF06224 Winged helix DNA-binding domain DK885_RS15355 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DK885_RS15360 PF00664 ABC transporter transmembrane region DK885_RS15360 PF00005 ABC transporter DK885_RS15365 PF00753 Metallo-beta-lactamase superfamily DK885_RS15365 PF03772 Competence protein DK885_RS15370 PF00216 Bacterial DNA-binding protein DK885_RS15375 PF00575 S1 RNA binding domain DK885_RS15380 PF02224 Cytidylate kinase DK885_RS15385 PF01435 Peptidase family M48 DK885_RS15390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK885_RS15395 PF00266 Aminotransferase class-V DK885_RS15400 PF04239 Protein of unknown function (DUF421) DK885_RS15405 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DK885_RS15405 PF18381 YcaO cyclodehydratase C-terminal domain DK885_RS15410 PF01226 Formate/nitrite transporter DK885_RS15415 PF02901 Pyruvate formate lyase-like DK885_RS15415 PF01228 Glycine radical DK885_RS15420 PF04055 Radical SAM superfamily DK885_RS15425 PF02525 Flavodoxin-like fold DK885_RS15430 PF03466 LysR substrate binding domain DK885_RS15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS15435 PF13520 Amino acid permease DK885_RS15440 PF07690 Major Facilitator Superfamily DK885_RS15445 PF00857 Isochorismatase family DK885_RS15450 PF04976 DMSO reductase anchor subunit (DmsC) DK885_RS15455 PF13247 4Fe-4S dicluster domain DK885_RS15455 PF12800 4Fe-4S binding domain DK885_RS15460 PF00384 Molybdopterin oxidoreductase DK885_RS15460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DK885_RS15460 PF01568 Molydopterin dinucleotide binding domain DK885_RS15465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK885_RS15465 PF02403 Seryl-tRNA synthetase N-terminal domain DK885_RS15470 PF12002 MgsA AAA+ ATPase C terminal DK885_RS15470 PF00004 ATPase family associated with various cellular activities (AAA) DK885_RS15470 PF16193 AAA C-terminal domain DK885_RS15475 PF03548 Outer membrane lipoprotein carrier protein LolA DK885_RS15480 PF17854 FtsK alpha domain DK885_RS15480 PF09397 Ftsk gamma domain DK885_RS15480 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DK885_RS15480 PF01580 FtsK/SpoIIIE family DK885_RS15485 PF01037 Lrp/AsnC ligand binding domain DK885_RS15495 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS15500 PF00005 ABC transporter DK885_RS15500 PF00664 ABC transporter transmembrane region DK885_RS15505 PF00005 ABC transporter DK885_RS15505 PF00664 ABC transporter transmembrane region DK885_RS15510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DK885_RS15515 PF01176 Translation initiation factor 1A / IF-1 DK885_RS15525 PF02861 Clp amino terminal domain, pathogenicity island component DK885_RS15525 PF17871 AAA lid domain DK885_RS15525 PF10431 C-terminal, D2-small domain, of ClpB protein DK885_RS15525 PF00004 ATPase family associated with various cellular activities (AAA) DK885_RS15525 PF07724 AAA domain (Cdc48 subfamily) DK885_RS15530 PF02617 ATP-dependent Clp protease adaptor protein ClpS DK885_RS15535 PF00313 'Cold-shock' DNA-binding domain DK885_RS15540 PF02687 FtsX-like permease family DK885_RS15540 PF00005 ABC transporter DK885_RS15540 PF12704 MacB-like periplasmic core domain DK885_RS15545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS15550 PF04393 Protein of unknown function (DUF535) DK885_RS15555 PF11398 Protein of unknown function (DUF2813) DK885_RS15560 PF00230 Major intrinsic protein DK885_RS15570 PF03956 Lysine exporter LysO DK885_RS15575 PF03063 Prismane/CO dehydrogenase family DK885_RS15580 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS15580 PF00175 Oxidoreductase NAD-binding domain DK885_RS15580 PF00970 Oxidoreductase FAD-binding domain DK885_RS15585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DK885_RS15585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DK885_RS15585 PF00205 Thiamine pyrophosphate enzyme, central domain DK885_RS15590 PF01212 Beta-eliminating lyase DK885_RS15595 PF13460 NAD(P)H-binding DK885_RS15595 PF11066 Protein of unknown function (DUF2867) DK885_RS15600 PF01370 NAD dependent epimerase/dehydratase family DK885_RS15605 PF01510 N-acetylmuramoyl-L-alanine amidase DK885_RS15610 PF01906 Putative heavy-metal-binding DK885_RS15615 PF12883 Protein of unknown function (DUF3828) DK885_RS15620 PF00005 ABC transporter DK885_RS15625 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS15630 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15635 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15640 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS15645 PF05958 tRNA (Uracil-5-)-methyltransferase DK885_RS15650 PF10767 Protein of unknown function (DUF2593) DK885_RS15655 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15665 PF08402 TOBE domain DK885_RS15665 PF00005 ABC transporter DK885_RS15670 PF13416 Bacterial extracellular solute-binding protein DK885_RS15680 PF10722 Putative bacterial sensory transduction regulator DK885_RS15685 PF08443 RimK-like ATP-grasp domain DK885_RS15685 PF18030 RimK PreATP-grasp domain DK885_RS15690 PF00881 Nitroreductase family DK885_RS15695 PF07214 Protein of unknown function (DUF1418) DK885_RS15700 PF00462 Glutaredoxin DK885_RS15705 PF11045 Putative inner membrane protein of Enterobacteriaceae DK885_RS15710 PF06826 Predicted Permease Membrane Region DK885_RS15710 PF02080 TrkA-C domain DK885_RS15715 PF00440 Bacterial regulatory proteins, tetR family DK885_RS15720 PF07690 Major Facilitator Superfamily DK885_RS15735 PF07690 Major Facilitator Superfamily DK885_RS15740 PF01569 PAP2 superfamily DK885_RS15745 PF08220 DeoR-like helix-turn-helix domain DK885_RS15745 PF00455 DeoR C terminal sensor domain DK885_RS15750 PF00768 D-alanyl-D-alanine carboxypeptidase DK885_RS15750 PF07943 Penicillin-binding protein 5, C-terminal domain DK885_RS15755 PF00043 Glutathione S-transferase, C-terminal domain DK885_RS15755 PF13417 Glutathione S-transferase, N-terminal domain DK885_RS15760 PF07995 Glucose / Sorbosone dehydrogenase DK885_RS15765 PF10799 Biofilm formation protein (YliH/bssR) DK885_RS15770 PF18693 TRAM domain DK885_RS15770 PF04055 Radical SAM superfamily DK885_RS15770 PF00919 Uncharacterized protein family UPF0004 DK885_RS15775 PF17156 Gammaproteobacterial periplasmic sensor domain DK885_RS15775 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS15780 PF17153 Periplasmic sensor domain, extracellular DK885_RS15780 PF00563 EAL domain DK885_RS15785 PF12911 N-terminal TM domain of oligopeptide transport permease C DK885_RS15785 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15790 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS15800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK885_RS15800 PF00005 ABC transporter DK885_RS15805 PF01112 Asparaginase DK885_RS15810 PF00994 Probable molybdopterin binding domain DK885_RS15810 PF03454 MoeA C-terminal region (domain IV) DK885_RS15810 PF03453 MoeA N-terminal region (domain I and II) DK885_RS15815 PF00899 ThiF family DK885_RS15820 PF00923 Transaldolase/Fructose-6-phosphate aldolase DK885_RS15825 PF04055 Radical SAM superfamily DK885_RS15830 PF01228 Glycine radical DK885_RS15830 PF02901 Pyruvate formate lyase-like DK885_RS15840 PF07350 Protein of unknown function (DUF1479) DK885_RS15845 PF00005 ABC transporter DK885_RS15845 PF12848 ABC transporter DK885_RS15850 PF03734 L,D-transpeptidase catalytic domain DK885_RS15850 PF17969 L,D-transpeptidase C-terminal domain DK885_RS15855 PF03600 Citrate transporter DK885_RS15860 PF01325 Iron dependent repressor, N-terminal DNA binding domain DK885_RS15860 PF02742 Iron dependent repressor, metal binding and dimerisation domain DK885_RS15870 PF00884 Sulfatase DK885_RS15875 PF13505 Outer membrane protein beta-barrel domain DK885_RS15880 PF00892 EamA-like transporter family DK885_RS15890 PF00210 Ferritin-like domain DK885_RS15905 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS15910 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS15915 PF00005 ABC transporter DK885_RS15920 PF00924 Mechanosensitive ion channel DK885_RS15925 PF05971 RNA methyltransferase DK885_RS15930 PF07338 Protein of unknown function (DUF1471) DK885_RS15935 PF00593 TonB dependent receptor DK885_RS15935 PF07715 TonB-dependent Receptor Plug Domain DK885_RS15940 PF13640 2OG-Fe(II) oxygenase superfamily DK885_RS15940 PF18331 PKHD-type hydroxylase C-terminal domain DK885_RS15945 PF01258 Prokaryotic dksA/traR C4-type zinc finger DK885_RS15950 PF07338 Protein of unknown function (DUF1471) DK885_RS15955 PF02615 Malate/L-lactate dehydrogenase DK885_RS15960 PF02885 Glycosyl transferase family, helical bundle domain DK885_RS15965 PF06733 DEAD_2 DK885_RS15965 PF00270 DEAD/DEAH box helicase DK885_RS15965 PF13307 Helicase C-terminal domain DK885_RS15975 PF08719 Domain of unknown function (DUF1768) DK885_RS15980 PF00270 DEAD/DEAH box helicase DK885_RS15980 PF00271 Helicase conserved C-terminal domain DK885_RS15985 PF00440 Bacterial regulatory proteins, tetR family DK885_RS15985 PF09209 Tetracyclin repressor-like, C-terminal domain DK885_RS15990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS15995 PF00005 ABC transporter DK885_RS16010 PF11076 Putative inner membrane protein YbhQ DK885_RS16015 PF03372 Endonuclease/Exonuclease/phosphatase family DK885_RS16020 PF13091 PLD-like domain DK885_RS16025 PF03706 Lysylphosphatidylglycerol synthase TM region DK885_RS16030 PF01027 Inhibitor of apoptosis-promoting Bax1 DK885_RS16035 PF01027 Inhibitor of apoptosis-promoting Bax1 DK885_RS16040 PF02391 MoaE protein DK885_RS16045 PF02597 ThiS family DK885_RS16050 PF01967 MoaC family DK885_RS16055 PF00994 Probable molybdopterin binding domain DK885_RS16060 PF04055 Radical SAM superfamily DK885_RS16060 PF06463 Molybdenum Cofactor Synthesis C DK885_RS16065 PF01933 Uncharacterised protein family UPF0052 DK885_RS16070 PF02151 UvrB/uvrC motif DK885_RS16070 PF00271 Helicase conserved C-terminal domain DK885_RS16070 PF04851 Type III restriction enzyme, res subunit DK885_RS16070 PF17757 UvrB interaction domain DK885_RS16070 PF12344 Ultra-violet resistance protein B DK885_RS16080 PF08241 Methyltransferase domain DK885_RS16085 PF00155 Aminotransferase class I and II DK885_RS16090 PF04055 Radical SAM superfamily DK885_RS16090 PF06968 Biotin and Thiamin Synthesis associated domain DK885_RS16095 PF00202 Aminotransferase class-III DK885_RS16100 PF01161 Phosphatidylethanolamine-binding protein DK885_RS16110 PF01095 Pectinesterase DK885_RS16115 PF00330 Aconitase family (aconitate hydratase) DK885_RS16115 PF00694 Aconitase C-terminal domain DK885_RS16120 PF00939 Sodium:sulfate symporter transmembrane region DK885_RS16125 PF04303 PrpF protein DK885_RS16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS16130 PF03466 LysR substrate binding domain DK885_RS16135 PF10282 Lactonase, 7-bladed beta-propeller DK885_RS16145 PF03459 TOBE domain DK885_RS16145 PF00005 ABC transporter DK885_RS16150 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS16165 PF10766 Multidrug efflux pump-associated protein AcrZ DK885_RS16170 PF03459 TOBE domain DK885_RS16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS16175 PF00005 ABC transporter DK885_RS16180 PF16363 GDP-mannose 4,6 dehydratase DK885_RS16185 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DK885_RS16185 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DK885_RS16190 PF08544 GHMP kinases C terminal DK885_RS16190 PF00288 GHMP kinases N terminal domain DK885_RS16190 PF10509 Galactokinase galactose-binding signature DK885_RS16195 PF01263 Aldose 1-epimerase DK885_RS16200 PF00300 Histidine phosphatase superfamily (branch 1) DK885_RS16205 PF00793 DAHP synthetase I family DK885_RS16215 PF13985 YbgS-like protein DK885_RS16220 PF01545 Cation efflux family DK885_RS16225 PF04973 Nicotinamide mononucleotide transporter DK885_RS16230 PF02445 Quinolinate synthetase A protein DK885_RS16275 PF16331 TolA binding protein trimerisation DK885_RS16275 PF13174 Tetratricopeptide repeat DK885_RS16280 PF00691 OmpA family DK885_RS16285 PF07676 WD40-like Beta Propeller Repeat DK885_RS16285 PF04052 TolB amino-terminal domain DK885_RS16290 PF06519 TolA C-terminal DK885_RS16295 PF02472 Biopolymer transport protein ExbD/TolR DK885_RS16300 PF01618 MotA/TolQ/ExbB proton channel family DK885_RS16305 PF03061 Thioesterase superfamily DK885_RS16310 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) DK885_RS16315 PF08173 Membrane bound YbgT-like protein DK885_RS16320 PF02322 Cytochrome bd terminal oxidase subunit II DK885_RS16325 PF01654 Cytochrome bd terminal oxidase subunit I DK885_RS16335 PF09261 Alpha mannosidase middle domain DK885_RS16335 PF01074 Glycosyl hydrolases family 38 N-terminal domain DK885_RS16335 PF07748 Glycosyl hydrolases family 38 C-terminal domain DK885_RS16340 PF02378 Phosphotransferase system, EIIC DK885_RS16340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS16340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS16345 PF00392 Bacterial regulatory proteins, gntR family DK885_RS16345 PF07702 UTRA domain DK885_RS16350 PF00549 CoA-ligase DK885_RS16350 PF02629 CoA binding domain DK885_RS16355 PF08442 ATP-grasp domain DK885_RS16355 PF00549 CoA-ligase DK885_RS16360 PF02817 e3 binding domain DK885_RS16360 PF00364 Biotin-requiring enzyme DK885_RS16360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DK885_RS16365 PF16870 2-oxoglutarate dehydrogenase C-terminal DK885_RS16365 PF16078 2-oxoglutarate dehydrogenase N-terminus DK885_RS16365 PF02779 Transketolase, pyrimidine binding domain DK885_RS16365 PF00676 Dehydrogenase E1 component DK885_RS16370 PF13085 2Fe-2S iron-sulfur cluster binding domain DK885_RS16375 PF00890 FAD binding domain DK885_RS16375 PF02910 Fumarate reductase flavoprotein C-term DK885_RS16380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DK885_RS16385 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DK885_RS16400 PF00285 Citrate synthase, C-terminal domain DK885_RS16405 PF00419 Fimbrial protein DK885_RS16410 PF13954 PapC N-terminal domain DK885_RS16410 PF00577 Outer membrane usher protein DK885_RS16410 PF13953 PapC C-terminal domain DK885_RS16415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS16415 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS16420 PF00419 Fimbrial protein DK885_RS16425 PF05145 Transition state regulatory protein AbrB DK885_RS16430 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DK885_RS16430 PF06827 Zinc finger found in FPG and IleRS DK885_RS16430 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DK885_RS16435 PF03746 LamB/YcsF family DK885_RS16440 PF02626 Carboxyltransferase domain, subdomain A and B DK885_RS16445 PF02682 Carboxyltransferase domain, subdomain C and D DK885_RS16450 PF01784 NIF3 (NGG1p interacting factor 3) DK885_RS16455 PF00854 POT family DK885_RS16460 PF03441 FAD binding domain of DNA photolyase DK885_RS16460 PF00875 DNA photolyase DK885_RS16465 PF08349 Protein of unknown function (DUF1722) DK885_RS16500 PF03527 RHS protein DK885_RS16500 PF05593 RHS Repeat DK885_RS16505 PF10725 Protein of unknown function (DUF2517) DK885_RS16510 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) DK885_RS16515 PF03814 Potassium-transporting ATPase A subunit DK885_RS16525 PF02669 K+-transporting ATPase, c chain DK885_RS16530 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS16530 PF13492 GAF domain DK885_RS16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS16530 PF02702 Osmosensitive K+ channel His kinase sensor domain DK885_RS16530 PF13493 Domain of unknown function (DUF4118) DK885_RS16535 PF00072 Response regulator receiver domain DK885_RS16535 PF00486 Transcriptional regulatory protein, C terminal DK885_RS16545 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DK885_RS16545 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DK885_RS16545 PF01276 Orn/Lys/Arg decarboxylase, major domain DK885_RS16550 PF13520 Amino acid permease DK885_RS16570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK885_RS16570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK885_RS16570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK885_RS16570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK885_RS16575 PF17206 SeqA protein N-terminal domain DK885_RS16575 PF03925 SeqA protein C-terminal domain DK885_RS16580 PF12697 Alpha/beta hydrolase family DK885_RS16585 PF01402 Ribbon-helix-helix protein, copG family DK885_RS16590 PF00258 Flavodoxin DK885_RS16600 PF01475 Ferric uptake regulator family DK885_RS16605 PF13982 YbfN-like lipoprotein DK885_RS16610 PF03573 outer membrane porin, OprD family DK885_RS16615 PF00749 tRNA synthetases class I (E and Q), catalytic domain DK885_RS16615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DK885_RS16620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK885_RS16620 PF00367 phosphotransferase system, EIIB DK885_RS16620 PF02378 Phosphotransferase system, EIIC DK885_RS16625 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DK885_RS16630 PF01979 Amidohydrolase family DK885_RS16635 PF00480 ROK family DK885_RS16635 PF01047 MarR family DK885_RS16640 PF13344 Haloacid dehalogenase-like hydrolase DK885_RS16650 PF13537 Glutamine amidotransferase domain DK885_RS16650 PF00733 Asparagine synthase DK885_RS16690 PF01494 FAD binding domain DK885_RS16695 PF01938 TRAM domain DK885_RS16695 PF00919 Uncharacterized protein family UPF0004 DK885_RS16695 PF04055 Radical SAM superfamily DK885_RS16700 PF02562 PhoH-like protein DK885_RS16705 PF02130 Uncharacterized protein family UPF0054 DK885_RS16710 PF00571 CBS domain DK885_RS16710 PF03471 Transporter associated domain DK885_RS16715 PF00795 Carbon-nitrogen hydrolase DK885_RS16725 PF01609 Transposase DDE domain DK885_RS16725 PF05598 Transposase domain (DUF772) DK885_RS16730 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK885_RS16735 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS16740 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS16745 PF00005 ABC transporter DK885_RS16750 PF01156 Inosine-uridine preferring nucleoside hydrolase DK885_RS16755 PF00012 Hsp70 protein DK885_RS16765 PF06889 Protein of unknown function (DUF1266) DK885_RS16770 PF08238 Sel1 repeat DK885_RS16780 PF06889 Protein of unknown function (DUF1266) DK885_RS16785 PF08238 Sel1 repeat DK885_RS16790 PF07295 Zinc-ribbon containing domain DK885_RS16795 PF13603 Leucyl-tRNA synthetase, Domain 2 DK885_RS16795 PF00133 tRNA synthetases class I (I, L, M and V) DK885_RS16795 PF08264 Anticodon-binding domain of tRNA DK885_RS16800 PF04390 Lipopolysaccharide-assembly DK885_RS16805 PF06144 DNA polymerase III, delta subunit DK885_RS16805 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DK885_RS16810 PF01467 Cytidylyltransferase-like DK885_RS16815 PF00300 Histidine phosphatase superfamily (branch 1) DK885_RS16825 PF02590 Predicted SPOUT methyltransferase DK885_RS16830 PF00905 Penicillin binding protein transpeptidase domain DK885_RS16830 PF03717 Penicillin-binding Protein dimerisation domain DK885_RS16835 PF01098 Cell cycle protein DK885_RS16840 PF05036 Sporulation related domain DK885_RS16840 PF03330 Lytic transglycolase DK885_RS16845 PF07943 Penicillin-binding protein 5, C-terminal domain DK885_RS16845 PF00768 D-alanyl-D-alanine carboxypeptidase DK885_RS16850 PF04359 Protein of unknown function (DUF493) DK885_RS16855 PF03099 Biotin/lipoate A/B protein ligase family DK885_RS16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS16865 PF03466 LysR substrate binding domain DK885_RS16875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DK885_RS16875 PF04055 Radical SAM superfamily DK885_RS16880 PF02416 mttA/Hcf106 family DK885_RS16890 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DK885_RS16895 PF00313 'Cold-shock' DNA-binding domain DK885_RS16900 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP DK885_RS16910 PF03606 C4-dicarboxylate anaerobic carrier DK885_RS16915 PF12431 Transcriptional regulator DK885_RS16915 PF00072 Response regulator receiver domain DK885_RS16920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS16920 PF17203 Single cache domain 3 DK885_RS16920 PF00989 PAS fold DK885_RS16920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DK885_RS16925 PF08218 Citrate lyase ligase C-terminal domain DK885_RS16930 PF06857 Malonate decarboxylase delta subunit (MdcD) DK885_RS16935 PF03328 HpcH/HpaI aldolase/citrate lyase family DK885_RS16940 PF04223 Citrate lyase, alpha subunit (CitF) DK885_RS16945 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DK885_RS16950 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DK885_RS16955 PF00939 Sodium:sulfate symporter transmembrane region DK885_RS16960 PF00445 Ribonuclease T2 family DK885_RS16970 PF14760 Rnk N-terminus DK885_RS16970 PF01272 Transcription elongation factor, GreA/GreB, C-term DK885_RS16980 PF00107 Zinc-binding dehydrogenase DK885_RS16980 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS16980 PF13823 Alcohol dehydrogenase GroES-associated DK885_RS16985 PF00582 Universal stress protein family DK885_RS16990 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS16990 PF13192 Thioredoxin domain DK885_RS16995 PF10417 C-terminal domain of 1-Cys peroxiredoxin DK885_RS16995 PF00578 AhpC/TSA family DK885_RS17000 PF13098 Thioredoxin-like domain DK885_RS17010 PF03466 LysR substrate binding domain DK885_RS17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS17015 PF11922 Domain of unknown function (DUF3440) DK885_RS17015 PF01507 Phosphoadenosine phosphosulfate reductase family DK885_RS17020 PF02195 ParB-like nuclease domain DK885_RS17025 PF00155 Aminotransferase class I and II DK885_RS17030 PF00465 Iron-containing alcohol dehydrogenase DK885_RS17035 PF04328 Selenoprotein, putative DK885_RS17040 PF02554 Carbon starvation protein CstA DK885_RS17040 PF13722 5TM C-terminal transporter carbon starvation CstA DK885_RS17045 PF03061 Thioesterase superfamily DK885_RS17055 PF00550 Phosphopantetheine attachment site DK885_RS17055 PF00857 Isochorismatase family DK885_RS17060 PF13193 AMP-binding enzyme C-terminal domain DK885_RS17060 PF00501 AMP-binding enzyme DK885_RS17065 PF00425 chorismate binding enzyme DK885_RS17075 PF01497 Periplasmic binding protein DK885_RS17080 PF05977 Transmembrane secretion effector DK885_RS17085 PF01032 FecCD transport family DK885_RS17090 PF01032 FecCD transport family DK885_RS17095 PF00005 ABC transporter DK885_RS17100 PF02706 Chain length determinant protein DK885_RS17105 PF00550 Phosphopantetheine attachment site DK885_RS17105 PF00668 Condensation domain DK885_RS17105 PF00501 AMP-binding enzyme DK885_RS17105 PF00975 Thioesterase domain DK885_RS17105 PF13193 AMP-binding enzyme C-terminal domain DK885_RS17110 PF03621 MbtH-like protein DK885_RS17115 PF11806 Domain of unknown function (DUF3327) DK885_RS17115 PF00756 Putative esterase DK885_RS17120 PF00593 TonB dependent receptor DK885_RS17120 PF07715 TonB-dependent Receptor Plug Domain DK885_RS17125 PF01648 4'-phosphopantetheinyl transferase superfamily DK885_RS17125 PF17837 4'-phosphopantetheinyl transferase N-terminal domain DK885_RS17130 PF01609 Transposase DDE domain DK885_RS17135 PF01848 Hok/gef family DK885_RS17150 PF04107 Glutamate-cysteine ligase family 2(GCS2) DK885_RS17155 PF06643 Protein of unknown function (DUF1158) DK885_RS17160 PF04237 YjbR DK885_RS17165 PF00881 Nitroreductase family DK885_RS17170 PF00924 Mechanosensitive ion channel DK885_RS17175 PF00324 Amino acid permease DK885_RS17180 PF00873 AcrB/AcrD/AcrF family DK885_RS17185 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS17185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS17190 PF11604 Copper binding periplasmic protein CusF DK885_RS17195 PF02321 Outer membrane efflux protein DK885_RS17205 PF00072 Response regulator receiver domain DK885_RS17205 PF00486 Transcriptional regulatory protein, C terminal DK885_RS17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS17210 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS17210 PF00672 HAMP domain DK885_RS17215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DK885_RS17215 PF13632 Glycosyl transferase family group 2 DK885_RS17220 PF13283 Bacteriophage N adsorption protein A C-term DK885_RS17225 PF14488 Domain of unknown function (DUF4434) DK885_RS17235 PF12833 Helix-turn-helix domain DK885_RS17250 PF01278 Omptin family DK885_RS17255 PF12833 Helix-turn-helix domain DK885_RS17265 PF08242 Methyltransferase domain DK885_RS17275 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DK885_RS17280 PF07471 Phage DNA packaging protein Nu1 DK885_RS17290 PF13132 Domain of unknown function (DUF3950) DK885_RS17305 PF07166 Protein of unknown function (DUF1398) DK885_RS17310 PF06291 Bor protein DK885_RS17315 PF03245 Bacteriophage Rz lysis protein DK885_RS17320 PF00959 Phage lysozyme DK885_RS17325 PF04971 Bacteriophage P21 holin S DK885_RS17330 PF00267 Gram-negative porin DK885_RS17340 PF05598 Transposase domain (DUF772) DK885_RS17340 PF01609 Transposase DDE domain DK885_RS17350 PF06530 Phage antitermination protein Q DK885_RS17360 PF05866 Endodeoxyribonuclease RusA DK885_RS17365 PF07102 Protein of unknown function (DUF1364) DK885_RS17385 PF12833 Helix-turn-helix domain DK885_RS17390 PF01161 Phosphatidylethanolamine-binding protein DK885_RS17395 PF13408 Recombinase zinc beta ribbon domain DK885_RS17395 PF07508 Recombinase DK885_RS17395 PF00239 Resolvase, N terminal domain DK885_RS17400 PF00893 Small Multidrug Resistance protein DK885_RS17430 PF00589 Phage integrase family DK885_RS17440 PF00196 Bacterial regulatory proteins, luxR family DK885_RS17440 PF00072 Response regulator receiver domain DK885_RS17445 PF00419 Fimbrial protein DK885_RS17450 PF00419 Fimbrial protein DK885_RS17455 PF13953 PapC C-terminal domain DK885_RS17455 PF13954 PapC N-terminal domain DK885_RS17455 PF00577 Outer membrane usher protein DK885_RS17460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS17460 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS17465 PF00419 Fimbrial protein DK885_RS17470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DK885_RS17470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DK885_RS17480 PF04307 LexA-binding, inner membrane-associated putative hydrolase DK885_RS17485 PF09190 DALR domain DK885_RS17485 PF01406 tRNA synthetases class I (C) catalytic domain DK885_RS17490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DK885_RS17495 PF12850 Calcineurin-like phosphoesterase superfamily domain DK885_RS17505 PF00731 AIR carboxylase DK885_RS17510 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DK885_RS17510 PF02222 ATP-grasp domain DK885_RS17515 PF00696 Amino acid kinase family DK885_RS17520 PF11392 Protein of unknown function (DUF2877) DK885_RS17525 PF06545 Protein of unknown function (DUF1116) DK885_RS17530 PF00549 CoA-ligase DK885_RS17530 PF02629 CoA binding domain DK885_RS17535 PF02615 Malate/L-lactate dehydrogenase DK885_RS17540 PF01546 Peptidase family M20/M25/M40 DK885_RS17545 PF05899 Protein of unknown function (DUF861) DK885_RS17545 PF07883 Cupin domain DK885_RS17550 PF02595 Glycerate kinase family DK885_RS17555 PF00860 Permease family DK885_RS17560 PF01979 Amidohydrolase family DK885_RS17565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DK885_RS17570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DK885_RS17570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DK885_RS17575 PF01261 Xylose isomerase-like TIM barrel DK885_RS17580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DK885_RS17580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DK885_RS17580 PF00205 Thiamine pyrophosphate enzyme, central domain DK885_RS17585 PF01614 Bacterial transcriptional regulator DK885_RS17585 PF09339 IclR helix-turn-helix domain DK885_RS17590 PF04115 Ureidoglycolate lyase DK885_RS17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS17595 PF03466 LysR substrate binding domain DK885_RS17625 PF15631 NTF2 fold immunity protein DK885_RS17630 PF14220 Domain of unknown function (DUF4329) DK885_RS17630 PF03527 RHS protein DK885_RS17630 PF05593 RHS Repeat DK885_RS17640 PF00005 ABC transporter DK885_RS17645 PF13472 GDSL-like Lipase/Acylhydrolase family DK885_RS17650 PF00106 short chain dehydrogenase DK885_RS17655 PF00085 Thioredoxin DK885_RS17660 PF03649 Uncharacterised protein family (UPF0014) DK885_RS17665 PF00005 ABC transporter DK885_RS17670 PF01145 SPFH domain / Band 7 family DK885_RS17670 PF16200 C-terminal region of band_7 DK885_RS17675 PF01957 NfeD-like C-terminal, partner-binding DK885_RS17680 PF13411 MerR HTH family regulatory protein DK885_RS17685 PF13520 Amino acid permease DK885_RS17690 PF04960 Glutaminase DK885_RS17695 PF00403 Heavy-metal-associated domain DK885_RS17700 PF01381 Helix-turn-helix DK885_RS17710 PF01963 TraB family DK885_RS17720 PF04073 Aminoacyl-tRNA editing domain DK885_RS17725 PF00149 Calcineurin-like phosphoesterase DK885_RS17725 PF02872 5'-nucleotidase, C-terminal domain DK885_RS17735 PF07690 Major Facilitator Superfamily DK885_RS17740 PF02254 TrkA-N domain DK885_RS17740 PF00999 Sodium/hydrogen exchanger family DK885_RS17745 PF00294 pfkB family carbohydrate kinase DK885_RS17750 PF07859 alpha/beta hydrolase fold DK885_RS17755 PF00762 Ferrochelatase DK885_RS17760 PF05191 Adenylate kinase, active site lid DK885_RS17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS17770 PF00183 Hsp90 protein DK885_RS17775 PF13662 Toprim domain DK885_RS17775 PF02132 RecR protein DK885_RS17780 PF02575 YbaB/EbfC DNA-binding family DK885_RS17785 PF12170 DNA polymerase III tau subunit V interacting with alpha DK885_RS17785 PF12169 DNA polymerase III subunits gamma and tau domain III DK885_RS17785 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DK885_RS17790 PF00156 Phosphoribosyl transferase domain DK885_RS17800 PF04304 Protein of unknown function (DUF454) DK885_RS17805 PF07445 Primosomal replication protein priC DK885_RS17810 PF10689 Protein of unknown function (DUF2496) DK885_RS17815 PF00924 Mechanosensitive ion channel DK885_RS17815 PF12795 Mechanosensitive ion channel porin domain DK885_RS17815 PF12794 Mechanosensitive ion channel inner membrane domain 1 DK885_RS17825 PF00440 Bacterial regulatory proteins, tetR family DK885_RS17825 PF08361 MAATS-type transcriptional repressor, C-terminal region DK885_RS17830 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS17830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS17835 PF00873 AcrB/AcrD/AcrF family DK885_RS17840 PF10757 Biofilm formation regulator YbaJ DK885_RS17845 PF05321 Haemolysin expression modulating protein DK885_RS17850 PF14602 Hexapeptide repeat of succinyl-transferase DK885_RS17850 PF12464 Maltose acetyltransferase DK885_RS17855 PF10777 Inner membrane protein YlaC DK885_RS17860 PF12792 CSS motif domain associated with EAL DK885_RS17860 PF00563 EAL domain DK885_RS17865 PF07237 Protein of unknown function (DUF1428) DK885_RS17875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DK885_RS17880 PF09619 Type III secretion system lipoprotein chaperone (YscW) DK885_RS17890 PF00909 Ammonium Transporter Family DK885_RS17895 PF00543 Nitrogen regulatory protein P-II DK885_RS17900 PF00664 ABC transporter transmembrane region DK885_RS17900 PF00005 ABC transporter DK885_RS17905 PF00664 ABC transporter transmembrane region DK885_RS17905 PF00005 ABC transporter DK885_RS17910 PF01037 Lrp/AsnC ligand binding domain DK885_RS17910 PF13404 AsnC-type helix-turn-helix domain DK885_RS17920 PF12793 Sugar transport-related sRNA regulator N-term DK885_RS17920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS17925 PF06508 Queuosine biosynthesis protein QueC DK885_RS17940 PF13145 PPIC-type PPIASE domain DK885_RS17945 PF00216 Bacterial DNA-binding protein DK885_RS17950 PF02190 ATP-dependent protease La (LON) substrate-binding domain DK885_RS17950 PF00004 ATPase family associated with various cellular activities (AAA) DK885_RS17950 PF05362 Lon protease (S16) C-terminal proteolytic domain DK885_RS17955 PF06689 ClpX C4-type zinc finger DK885_RS17955 PF07724 AAA domain (Cdc48 subfamily) DK885_RS17955 PF10431 C-terminal, D2-small domain, of ClpB protein DK885_RS17960 PF00574 Clp protease DK885_RS17965 PF05697 Bacterial trigger factor protein (TF) DK885_RS17965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DK885_RS17965 PF05698 Bacterial trigger factor protein (TF) C-terminus DK885_RS17975 PF01722 BolA-like protein DK885_RS17985 PF03923 Uncharacterized lipoprotein DK885_RS17985 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DK885_RS17990 PF07690 Major Facilitator Superfamily DK885_RS17995 PF06481 COX Aromatic Rich Motif DK885_RS17995 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DK885_RS18000 PF00115 Cytochrome C and Quinol oxidase polypeptide I DK885_RS18005 PF00510 Cytochrome c oxidase subunit III DK885_RS18010 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DK885_RS18015 PF01040 UbiA prenyltransferase family DK885_RS18020 PF07690 Major Facilitator Superfamily DK885_RS18025 PF04461 Protein of unknown function (DUF520) DK885_RS18030 PF02558 Ketopantoate reductase PanE/ApbA DK885_RS18030 PF08546 Ketopantoate reductase PanE/ApbA C terminal DK885_RS18035 PF01965 DJ-1/PfpI family DK885_RS18040 PF02568 Thiamine biosynthesis protein (ThiI) DK885_RS18040 PF02926 THUMP domain DK885_RS18045 PF02609 Exonuclease VII small subunit DK885_RS18050 PF00348 Polyprenyl synthetase DK885_RS18055 PF02780 Transketolase, C-terminal domain DK885_RS18055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DK885_RS18055 PF02779 Transketolase, pyrimidine binding domain DK885_RS18060 PF00248 Aldo/keto reductase family DK885_RS18065 PF04608 Phosphatidylglycerophosphatase A DK885_RS18070 PF00586 AIR synthase related protein, N-terminal domain DK885_RS18070 PF02769 AIR synthase related protein, C-terminal domain DK885_RS18075 PF01029 NusB family DK885_RS18080 PF00885 6,7-dimethyl-8-ribityllumazine synthase DK885_RS18085 PF01872 RibD C-terminal domain DK885_RS18085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DK885_RS18090 PF03477 ATP cone domain DK885_RS18095 PF11622 Protein of unknown function (DUF3251) DK885_RS18105 PF03502 Nucleoside-specific channel-forming protein, Tsx DK885_RS18110 PF01844 HNH endonuclease DK885_RS18115 PF02355 Protein export membrane protein DK885_RS18115 PF07549 SecD/SecF GG Motif DK885_RS18120 PF02355 Protein export membrane protein DK885_RS18120 PF13721 SecD export protein N-terminal TM region DK885_RS18120 PF07549 SecD/SecF GG Motif DK885_RS18125 PF02699 Preprotein translocase subunit DK885_RS18130 PF01702 Queuine tRNA-ribosyltransferase DK885_RS18135 PF02547 Queuosine biosynthesis protein DK885_RS18140 PF04336 Acyl carrier protein phosphodiesterase DK885_RS18145 PF00128 Alpha amylase, catalytic domain DK885_RS18145 PF02903 Alpha amylase, N-terminal ig-like domain DK885_RS18150 PF00324 Amino acid permease DK885_RS18155 PF05525 Branched-chain amino acid transport protein DK885_RS18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS18160 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS18160 PF00989 PAS fold DK885_RS18160 PF11808 Phosphate regulon sensor protein PhoR DK885_RS18165 PF00072 Response regulator receiver domain DK885_RS18165 PF00486 Transcriptional regulatory protein, C terminal DK885_RS18170 PF00149 Calcineurin-like phosphoesterase DK885_RS18170 PF12320 Type 5 capsule protein repressor C-terminal domain DK885_RS18175 PF13476 AAA domain DK885_RS18180 PF07690 Major Facilitator Superfamily DK885_RS18185 PF00480 ROK family DK885_RS18190 PF04381 Putative exonuclease, RdgC DK885_RS18195 PF10971 Protein of unknown function (DUF2773) DK885_RS18205 PF06865 Pyrimidine/purine nucleoside phosphorylase DK885_RS18210 PF07302 AroM protein DK885_RS18220 PF16362 YaiA protein DK885_RS18225 PF01202 Shikimate kinase DK885_RS18230 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DK885_RS18235 PF03807 NADP oxidoreductase coenzyme F420-dependent DK885_RS18235 PF14748 Pyrroline-5-carboxylate reductase dimerisation DK885_RS18240 PF00990 Diguanylate cyclase, GGDEF domain DK885_RS18240 PF05230 MASE2 domain DK885_RS18245 PF07769 psiF repeat DK885_RS18250 PF00245 Alkaline phosphatase DK885_RS18255 PF10796 Sigma-S stabilisation anti-adaptor protein DK885_RS18265 PF01820 D-ala D-ala ligase N-terminus DK885_RS18265 PF07478 D-ala D-ala ligase C-terminus DK885_RS18270 PF10953 Protein of unknown function (DUF2754) DK885_RS18280 PF10954 Protein of unknown function (DUF2755) DK885_RS18285 PF07759 Protein of unknown function (DUF1615) DK885_RS18290 PF05992 SbmA/BacA-like family DK885_RS18300 PF00144 Beta-lactamase DK885_RS18305 PF15977 Winged helix-turn-helix DNA binding DK885_RS18320 PF03797 Autotransporter beta-domain DK885_RS18320 PF03212 Pertactin DK885_RS18330 PF00490 Delta-aminolevulinic acid dehydratase DK885_RS18335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DK885_RS18340 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS18345 PF00005 ABC transporter DK885_RS18350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DK885_RS18360 PF02585 GlcNAc-PI de-N-acetylase DK885_RS18365 PF00535 Glycosyl transferase family 2 DK885_RS18385 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS18395 PF02583 Metal-sensitive transcriptional repressor DK885_RS18400 PF00107 Zinc-binding dehydrogenase DK885_RS18400 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS18405 PF00756 Putative esterase DK885_RS18410 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DK885_RS18415 PF07690 Major Facilitator Superfamily DK885_RS18420 PF07836 DmpG-like communication domain DK885_RS18420 PF00682 HMGL-like DK885_RS18425 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DK885_RS18425 PF01118 Semialdehyde dehydrogenase, NAD binding domain DK885_RS18430 PF01557 Fumarylacetoacetate (FAA) hydrolase family DK885_RS18435 PF12697 Alpha/beta hydrolase family DK885_RS18440 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DK885_RS18445 PF01494 FAD binding domain DK885_RS18450 PF09339 IclR helix-turn-helix domain DK885_RS18450 PF01614 Bacterial transcriptional regulator DK885_RS18455 PF00356 Bacterial regulatory proteins, lacI family DK885_RS18465 PF02929 Beta galactosidase small chain DK885_RS18465 PF00703 Glycosyl hydrolases family 2 DK885_RS18465 PF16353 Domain of unknown function(DUF4981) DK885_RS18465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DK885_RS18465 PF02837 Glycosyl hydrolases family 2, sugar binding domain DK885_RS18485 PF00267 Gram-negative porin DK885_RS18490 PF00696 Amino acid kinase family DK885_RS18490 PF01472 PUA domain DK885_RS18495 PF00171 Aldehyde dehydrogenase family DK885_RS18505 PF06755 CbtA_toxin of type IV toxin-antitoxin system DK885_RS18510 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A DK885_RS18515 PF06174 Protein of unknown function (DUF987) DK885_RS18520 PF04002 RadC-like JAB domain DK885_RS18525 PF03230 Antirestriction protein DK885_RS18530 PF06006 Bacterial protein of unknown function (DUF905) DK885_RS18555 PF06067 Domain of unknown function (DUF932) DK885_RS18560 PF01926 50S ribosome-binding GTPase DK885_RS18565 PF03466 LysR substrate binding domain DK885_RS18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS18575 PF01527 Transposase DK885_RS18580 PF13936 Helix-turn-helix domain DK885_RS18580 PF00665 Integrase core domain DK885_RS18605 PF05598 Transposase domain (DUF772) DK885_RS18605 PF01609 Transposase DDE domain DK885_RS18615 PF00324 Amino acid permease DK885_RS18620 PF02574 Homocysteine S-methyltransferase DK885_RS18625 PF00005 ABC transporter DK885_RS18625 PF08402 TOBE domain DK885_RS18655 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A DK885_RS18660 PF00665 Integrase core domain DK885_RS18665 PF00701 Dihydrodipicolinate synthetase family DK885_RS18670 PF00920 Dehydratase family DK885_RS18680 PF04616 Glycosyl hydrolases family 43 DK885_RS18680 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DK885_RS18685 PF09339 IclR helix-turn-helix domain DK885_RS18685 PF01614 Bacterial transcriptional regulator DK885_RS18690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK885_RS18690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK885_RS18725 PF07638 ECF sigma factor DK885_RS18745 PF00589 Phage integrase family DK885_RS18745 PF13356 Arm DNA-binding domain DK885_RS18755 PF03466 LysR substrate binding domain DK885_RS18760 PF02625 XdhC and CoxI family DK885_RS18760 PF13478 XdhC Rossmann domain DK885_RS18765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DK885_RS18765 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DK885_RS18770 PF00941 FAD binding domain in molybdopterin dehydrogenase DK885_RS18770 PF03450 CO dehydrogenase flavoprotein C-terminal domain DK885_RS18775 PF00111 2Fe-2S iron-sulfur cluster binding domain DK885_RS18775 PF01799 [2Fe-2S] binding domain DK885_RS18785 PF07274 Protein of unknown function (DUF1440) DK885_RS18795 PF03692 Putative zinc- or iron-chelating domain DK885_RS18810 PF16967 E-set like domain DK885_RS18810 PF15976 CS1-pili formation C-terminal DK885_RS18815 PF18649 EcpB C-terminal domain DK885_RS18820 PF16449 Fimbrillin MatB DK885_RS18825 PF00196 Bacterial regulatory proteins, luxR family DK885_RS18840 PF00444 Ribosomal protein L36 DK885_RS18845 PF01197 Ribosomal protein L31 DK885_RS18865 PF11924 Inverse autotransporter, beta-domain DK885_RS18880 PF04224 Protein of unknown function, DUF417 DK885_RS18885 PF07338 Protein of unknown function (DUF1471) DK885_RS18890 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS18890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK885_RS18895 PF12833 Helix-turn-helix domain DK885_RS18895 PF12852 Cupin DK885_RS18900 PF02754 Cysteine-rich domain DK885_RS18920 PF07417 Sigma factor-binding transcriptional regulator Crl DK885_RS18925 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) DK885_RS18930 PF00156 Phosphoribosyl transferase domain DK885_RS18935 PF01546 Peptidase family M20/M25/M40 DK885_RS18935 PF07687 Peptidase dimerisation domain DK885_RS18940 PF00472 RF-1 domain DK885_RS18955 PF13673 Acetyltransferase (GNAT) domain DK885_RS18960 PF13957 Toxin YafO, type II toxin-antitoxin system DK885_RS18970 PF11798 IMS family HHH motif DK885_RS18970 PF11799 impB/mucB/samB family C-terminal domain DK885_RS18970 PF00817 impB/mucB/samB family DK885_RS18975 PF13677 Membrane MotB of proton-channel complex MotA/MotB DK885_RS18975 PF00691 OmpA family DK885_RS18980 PF00771 FHIPEP family DK885_RS18990 PF00877 NlpC/P60 family DK885_RS18995 PF04221 RelB antitoxin DK885_RS19000 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ DK885_RS19005 PF03734 L,D-transpeptidase catalytic domain DK885_RS19010 PF13230 Glutamine amidotransferases class-II DK885_RS19015 PF13580 SIS domain DK885_RS19020 PF02770 Acyl-CoA dehydrogenase, middle domain DK885_RS19020 PF09317 Domain of unknown function (DUF1974) DK885_RS19020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DK885_RS19020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DK885_RS19030 PF00795 Carbon-nitrogen hydrolase DK885_RS19065 PF00929 Exonuclease DK885_RS19070 PF00075 RNase H DK885_RS19075 PF08241 Methyltransferase domain DK885_RS19080 PF00753 Metallo-beta-lactamase superfamily DK885_RS19080 PF16123 Hydroxyacylglutathione hydrolase C-terminus DK885_RS19085 PF01464 Transglycosylase SLT domain DK885_RS19085 PF01476 LysM domain DK885_RS19090 PF08241 Methyltransferase domain DK885_RS19095 PF03372 Endonuclease/Exonuclease/phosphatase family DK885_RS19100 PF03466 LysR substrate binding domain DK885_RS19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS19105 PF00248 Aldo/keto reductase family DK885_RS19145 PF00005 ABC transporter DK885_RS19145 PF09383 NIL domain DK885_RS19150 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS19155 PF03180 NLPA lipoprotein DK885_RS19160 PF16358 RcsF lipoprotein DK885_RS19165 PF01980 tRNA-methyltransferase O DK885_RS19165 PF18389 TrmO C-terminal domain DK885_RS19170 PF04073 Aminoacyl-tRNA editing domain DK885_RS19170 PF03129 Anticodon binding domain DK885_RS19170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK885_RS19175 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DK885_RS19180 PF17185 NlpE C-terminal OB domain DK885_RS19180 PF04170 NlpE N-terminal domain DK885_RS19185 PF00472 RF-1 domain DK885_RS19190 PF07152 YaeQ protein DK885_RS19195 PF06786 Uncharacterised protein family (UPF0253) DK885_RS19200 PF07073 Modulator of Rho-dependent transcription termination (ROF) DK885_RS19205 PF11734 TilS substrate C-terminal domain DK885_RS19205 PF01171 PP-loop family DK885_RS19205 PF09179 TilS substrate binding domain DK885_RS19210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK885_RS19215 PF01276 Orn/Lys/Arg decarboxylase, major domain DK885_RS19215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DK885_RS19215 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DK885_RS19220 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DK885_RS19225 PF02811 PHP domain DK885_RS19225 PF07733 Bacterial DNA polymerase III alpha NTPase domain DK885_RS19225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DK885_RS19225 PF01336 OB-fold nucleic acid binding domain DK885_RS19225 PF14579 Helix-hairpin-helix motif DK885_RS19230 PF01351 Ribonuclease HII DK885_RS19235 PF02684 Lipid-A-disaccharide synthetase DK885_RS19240 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DK885_RS19240 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS19245 PF07977 FabA-like domain DK885_RS19250 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DK885_RS19250 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS19255 PF03938 Outer membrane protein (OmpH-like) DK885_RS19260 PF01103 Surface antigen DK885_RS19260 PF07244 Surface antigen variable number repeat DK885_RS19265 PF17820 PDZ domain DK885_RS19265 PF02163 Peptidase family M50 DK885_RS19275 PF01255 Putative undecaprenyl diphosphate synthase DK885_RS19280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DK885_RS19280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DK885_RS19280 PF13288 DXP reductoisomerase C-terminal domain DK885_RS19285 PF01765 Ribosome recycling factor DK885_RS19290 PF00696 Amino acid kinase family DK885_RS19295 PF00889 Elongation factor TS DK885_RS19305 PF00318 Ribosomal protein S2 DK885_RS19315 PF00557 Metallopeptidase family M24 DK885_RS19320 PF01909 Nucleotidyltransferase domain DK885_RS19320 PF01842 ACT domain DK885_RS19320 PF08335 GlnD PII-uridylyltransferase DK885_RS19320 PF01966 HD domain DK885_RS19325 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS19325 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DK885_RS19325 PF14602 Hexapeptide repeat of succinyl-transferase DK885_RS19330 PF00149 Calcineurin-like phosphoesterase DK885_RS19335 PF11944 Protein of unknown function (DUF3461) DK885_RS19340 PF05651 Putative sugar diacid recognition DK885_RS19340 PF13556 PucR C-terminal helix-turn-helix domain DK885_RS19340 PF17853 GGDEF-like domain DK885_RS19345 PF00595 PDZ domain DK885_RS19355 PF01966 HD domain DK885_RS19355 PF13286 Phosphohydrolase-associated domain DK885_RS19360 PF01048 Phosphorylase superfamily DK885_RS19365 PF01497 Periplasmic binding protein DK885_RS19370 PF03458 UPF0126 domain DK885_RS19375 PF01521 Iron-sulphur cluster biosynthesis DK885_RS19380 PF00654 Voltage gated chloride channel DK885_RS19385 PF00202 Aminotransferase class-III DK885_RS19390 PF01032 FecCD transport family DK885_RS19395 PF01497 Periplasmic binding protein DK885_RS19400 PF00005 ABC transporter DK885_RS19410 PF14814 Bifunctional transglycosylase second domain DK885_RS19410 PF00905 Penicillin binding protein transpeptidase domain DK885_RS19410 PF00912 Transglycosylase DK885_RS19410 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal DK885_RS19420 PF00271 Helicase conserved C-terminal domain DK885_RS19420 PF04408 Helicase associated domain (HA2) DK885_RS19420 PF00270 DEAD/DEAH box helicase DK885_RS19420 PF08482 ATP-dependent helicase C-terminal DK885_RS19425 PF02834 LigT like Phosphoesterase DK885_RS19430 PF03749 Sugar fermentation stimulation protein RE domain DK885_RS19430 PF17746 SfsA N-terminal OB domain DK885_RS19435 PF01258 Prokaryotic dksA/traR C4-type zinc finger DK885_RS19440 PF00749 tRNA synthetases class I (E and Q), catalytic domain DK885_RS19445 PF01743 Poly A polymerase head domain DK885_RS19445 PF12627 Probable RNA and SrmB- binding site of polymerase A DK885_RS19445 PF12626 Polymerase A arginine-rich C-terminus DK885_RS19450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DK885_RS19455 PF00419 Fimbrial protein DK885_RS19460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS19460 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS19465 PF00577 Outer membrane usher protein DK885_RS19465 PF13953 PapC C-terminal domain DK885_RS19465 PF13954 PapC N-terminal domain DK885_RS19470 PF00419 Fimbrial protein DK885_RS19475 PF00419 Fimbrial protein DK885_RS19480 PF00419 Fimbrial protein DK885_RS19485 PF00419 Fimbrial protein DK885_RS19490 PF02548 Ketopantoate hydroxymethyltransferase DK885_RS19495 PF02569 Pantoate-beta-alanine ligase DK885_RS19500 PF04754 Putative transposase, YhgA-like DK885_RS19515 PF02261 Aspartate decarboxylase DK885_RS19520 PF01522 Polysaccharide deacetylase DK885_RS19525 PF03610 PTS system fructose IIA component DK885_RS19530 PF01061 ABC-2 type transporter DK885_RS19535 PF00005 ABC transporter DK885_RS19540 PF00484 Carbonic anhydrase DK885_RS19545 PF00156 Phosphoribosyl transferase domain DK885_RS19550 PF01011 PQQ enzyme repeat DK885_RS19555 PF07731 Multicopper oxidase DK885_RS19555 PF07732 Multicopper oxidase DK885_RS19555 PF00394 Multicopper oxidase DK885_RS19560 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) DK885_RS19565 PF17284 Spermidine synthase tetramerisation domain DK885_RS19570 PF02675 S-adenosylmethionine decarboxylase DK885_RS19575 PF06062 Uncharacterised protein family (UPF0231) DK885_RS19580 PF00330 Aconitase family (aconitate hydratase) DK885_RS19580 PF06434 Aconitate hydratase 2 N-terminus DK885_RS19580 PF11791 Aconitate B N-terminal domain DK885_RS19590 PF11737 Protein of unknown function (DUF3300) DK885_RS19595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS19595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK885_RS19600 PF00364 Biotin-requiring enzyme DK885_RS19600 PF02817 e3 binding domain DK885_RS19600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DK885_RS19605 PF00456 Transketolase, thiamine diphosphate binding domain DK885_RS19605 PF17831 Pyruvate dehydrogenase E1 component middle domain DK885_RS19615 PF07729 FCD domain DK885_RS19615 PF00392 Bacterial regulatory proteins, gntR family DK885_RS19620 PF00324 Amino acid permease DK885_RS19625 PF17113 Regulatory signalling modulator protein AmpE DK885_RS19630 PF01510 N-acetylmuramoyl-L-alanine amidase DK885_RS19635 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DK885_RS19635 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DK885_RS19645 PF07963 Prokaryotic N-terminal methylation motif DK885_RS19650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DK885_RS19650 PF00437 Type II/IV secretion system protein DK885_RS19655 PF00482 Type II secretion system (T2SS), protein F DK885_RS19660 PF00478 IMP dehydrogenase / GMP reductase domain DK885_RS19665 PF01121 Dephospho-CoA kinase DK885_RS19670 PF07072 Cell division protein DK885_RS19675 PF03884 DNA gyrase inhibitor YacG DK885_RS19680 PF00293 NUDIX domain DK885_RS19685 PF01043 SecA preprotein cross-linking domain DK885_RS19685 PF02810 SEC-C motif DK885_RS19685 PF07516 SecA Wing and Scaffold domain DK885_RS19685 PF07517 SecA DEAD-like domain DK885_RS19690 PF06558 Secretion monitor precursor protein (SecM) DK885_RS19695 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DK885_RS19700 PF12327 FtsZ family, C-terminal domain DK885_RS19700 PF00091 Tubulin/FtsZ family, GTPase domain DK885_RS19705 PF02491 SHS2 domain inserted in FTSA DK885_RS19710 PF03799 Cell division protein FtsQ DK885_RS19710 PF08478 POTRA domain, FtsQ-type DK885_RS19715 PF01820 D-ala D-ala ligase N-terminus DK885_RS19715 PF07478 D-ala D-ala ligase C-terminus DK885_RS19720 PF02875 Mur ligase family, glutamate ligase domain DK885_RS19720 PF01225 Mur ligase family, catalytic domain DK885_RS19720 PF08245 Mur ligase middle domain DK885_RS19725 PF04101 Glycosyltransferase family 28 C-terminal domain DK885_RS19725 PF03033 Glycosyltransferase family 28 N-terminal domain DK885_RS19730 PF01098 Cell cycle protein DK885_RS19735 PF08245 Mur ligase middle domain DK885_RS19735 PF02875 Mur ligase family, glutamate ligase domain DK885_RS19740 PF00953 Glycosyl transferase family 4 DK885_RS19740 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DK885_RS19745 PF01225 Mur ligase family, catalytic domain DK885_RS19745 PF08245 Mur ligase middle domain DK885_RS19745 PF02875 Mur ligase family, glutamate ligase domain DK885_RS19750 PF02875 Mur ligase family, glutamate ligase domain DK885_RS19750 PF01225 Mur ligase family, catalytic domain DK885_RS19750 PF08245 Mur ligase middle domain DK885_RS19755 PF00905 Penicillin binding protein transpeptidase domain DK885_RS19755 PF03717 Penicillin-binding Protein dimerisation domain DK885_RS19760 PF04999 Cell division protein FtsL DK885_RS19765 PF01795 MraW methylase family DK885_RS19770 PF02381 MraZ protein, putative antitoxin-like DK885_RS19780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DK885_RS19780 PF00356 Bacterial regulatory proteins, lacI family DK885_RS19790 PF10369 Small subunit of acetolactate synthase DK885_RS19795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DK885_RS19795 PF00205 Thiamine pyrophosphate enzyme, central domain DK885_RS19795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DK885_RS19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS19800 PF03466 LysR substrate binding domain DK885_RS19805 PF08054 Leucine operon leader peptide DK885_RS19810 PF00682 HMGL-like DK885_RS19810 PF08502 LeuA allosteric (dimerisation) domain DK885_RS19815 PF00180 Isocitrate/isopropylmalate dehydrogenase DK885_RS19820 PF00330 Aconitase family (aconitate hydratase) DK885_RS19825 PF00694 Aconitase C-terminal domain DK885_RS19830 PF07690 Major Facilitator Superfamily DK885_RS19840 PF12793 Sugar transport-related sRNA regulator N-term DK885_RS19840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK885_RS19850 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS19855 PF00005 ABC transporter DK885_RS19860 PF09335 SNARE associated Golgi protein DK885_RS19865 PF12833 Helix-turn-helix domain DK885_RS19865 PF02311 AraC-like ligand binding domain DK885_RS19875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS19880 PF11762 L-arabinose isomerase C-terminal domain DK885_RS19880 PF02610 L-arabinose isomerase DK885_RS19885 PF00596 Class II Aldolase and Adducin N-terminal domain DK885_RS19890 PF00136 DNA polymerase family B DK885_RS19890 PF03104 DNA polymerase family B, exonuclease domain DK885_RS19895 PF00271 Helicase conserved C-terminal domain DK885_RS19895 PF12137 RNA polymerase recycling family C-terminal DK885_RS19895 PF00176 SNF2 family N-terminal domain DK885_RS19895 PF18339 RapA N-terminal Tudor like domain 1 DK885_RS19895 PF18337 RapA N-terminal Tudor like domain DK885_RS19900 PF00849 RNA pseudouridylate synthase DK885_RS19915 PF05099 Tellurite resistance protein TerB DK885_RS19915 PF00226 DnaJ domain DK885_RS19920 PF04453 LPS transport system D DK885_RS19920 PF03968 OstA-like protein DK885_RS19925 PF09312 SurA N-terminal domain DK885_RS19925 PF00639 PPIC-type PPIASE domain DK885_RS19930 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DK885_RS19935 PF00398 Ribosomal RNA adenine dimethylase DK885_RS19940 PF04379 ApaG domain DK885_RS19945 PF00149 Calcineurin-like phosphoesterase DK885_RS19950 PF00186 Dihydrofolate reductase DK885_RS19955 PF00999 Sodium/hydrogen exchanger family DK885_RS19955 PF02254 TrkA-N domain DK885_RS19960 PF02525 Flavodoxin-like fold DK885_RS19965 PF00083 Sugar (and other) transporter DK885_RS19975 PF01494 FAD binding domain DK885_RS19980 PF01012 Electron transfer flavoprotein domain DK885_RS19980 PF00766 Electron transfer flavoprotein FAD-binding domain DK885_RS19985 PF01012 Electron transfer flavoprotein domain DK885_RS19990 PF02028 BCCT, betaine/carnitine/choline family transporter DK885_RS19995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DK885_RS19995 PF02770 Acyl-CoA dehydrogenase, middle domain DK885_RS19995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DK885_RS20000 PF02515 CoA-transferase family III DK885_RS20005 PF13193 AMP-binding enzyme C-terminal domain DK885_RS20005 PF00501 AMP-binding enzyme DK885_RS20010 PF00378 Enoyl-CoA hydratase/isomerase DK885_RS20015 PF00132 Bacterial transferase hexapeptide (six repeats) DK885_RS20020 PF07180 CaiF/GrlA transcriptional regulator DK885_RS20030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DK885_RS20030 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DK885_RS20030 PF02142 MGS-like domain DK885_RS20035 PF00117 Glutamine amidotransferase class-I DK885_RS20035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DK885_RS20040 PF05173 Dihydrodipicolinate reductase, C-terminus DK885_RS20040 PF01113 Dihydrodipicolinate reductase, N-terminus DK885_RS20045 PF01156 Inosine-uridine preferring nucleoside hydrolase DK885_RS20050 PF02401 LytB protein DK885_RS20055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DK885_RS20060 PF01252 Signal peptidase (SPase) II DK885_RS20065 PF00133 tRNA synthetases class I (I, L, M and V) DK885_RS20065 PF06827 Zinc finger found in FPG and IleRS DK885_RS20065 PF08264 Anticodon-binding domain of tRNA DK885_RS20070 PF06574 FAD synthetase DK885_RS20070 PF01687 Riboflavin kinase DK885_RS20075 PF10837 Protein of unknown function (DUF2575) DK885_RS20080 PF01649 Ribosomal protein S20 DK885_RS20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS20095 PF03466 LysR substrate binding domain DK885_RS20100 PF06965 Na+/H+ antiporter 1 DK885_RS20105 PF01848 Hok/gef family DK885_RS20110 PF01609 Transposase DDE domain DK885_RS20115 PF01556 DnaJ C terminal domain DK885_RS20115 PF00226 DnaJ domain DK885_RS20115 PF00684 DnaJ central domain DK885_RS20120 PF00012 Hsp70 protein DK885_RS20125 PF10807 Protein of unknown function (DUF2541) DK885_RS20130 PF03981 Ubiquinol-cytochrome C chaperone DK885_RS20130 PF13099 Domain of unknown function (DUF3944) DK885_RS20135 PF01184 GPR1/FUN34/yaaH family DK885_RS20140 PF00994 Probable molybdopterin binding domain DK885_RS20145 PF00923 Transaldolase/Fructose-6-phosphate aldolase DK885_RS20150 PF01235 Sodium:alanine symporter family DK885_RS20155 PF03883 Peroxide stress protein YaaA DK885_RS20160 PF10697 Protein of unknown function (DUF2502) DK885_RS20165 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS20165 PF14821 Threonine synthase N terminus DK885_RS20175 PF01842 ACT domain DK885_RS20175 PF13840 ACT domain DK885_RS20175 PF00742 Homoserine dehydrogenase DK885_RS20175 PF03447 Homoserine dehydrogenase, NAD binding domain DK885_RS20175 PF00696 Amino acid kinase family DK885_RS20180 PF08254 Threonine leader peptide DK885_RS20185 PF00588 SpoU rRNA Methylase family DK885_RS20195 PF00486 Transcriptional regulatory protein, C terminal DK885_RS20195 PF00072 Response regulator receiver domain DK885_RS20200 PF06123 Inner membrane protein CreD DK885_RS20205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS20205 PF00672 HAMP domain DK885_RS20205 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS20210 PF00072 Response regulator receiver domain DK885_RS20210 PF00486 Transcriptional regulatory protein, C terminal DK885_RS20215 PF05981 CreA protein DK885_RS20220 PF12833 Helix-turn-helix domain DK885_RS20220 PF06445 GyrI-like small molecule binding domain DK885_RS20225 PF00300 Histidine phosphatase superfamily (branch 1) DK885_RS20230 PF01931 Protein of unknown function DUF84 DK885_RS20235 PF01371 Trp repressor protein DK885_RS20240 PF01464 Transglycosylase SLT domain DK885_RS20240 PF14718 Soluble lytic murein transglycosylase L domain DK885_RS20250 PF12848 ABC transporter DK885_RS20250 PF00005 ABC transporter DK885_RS20255 PF01381 Helix-turn-helix DK885_RS20255 PF13521 AAA domain DK885_RS20260 PF18073 Rubredoxin metal binding domain DK885_RS20265 PF18429 Domain of unknown function (DUF5609) DK885_RS20270 PF10144 Bacterial virulence factor haemolysin DK885_RS20275 PF10437 Bacterial lipoate protein ligase C-terminus DK885_RS20275 PF03099 Biotin/lipoate A/B protein ligase family DK885_RS20280 PF07804 HipA-like C-terminal domain DK885_RS20285 PF01048 Phosphorylase superfamily DK885_RS20290 PF01676 Metalloenzyme superfamily DK885_RS20295 PF00591 Glycosyl transferase family, a/b domain DK885_RS20295 PF02885 Glycosyl transferase family, helical bundle domain DK885_RS20295 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DK885_RS20300 PF01791 DeoC/LacD family aldolase DK885_RS20305 PF11230 Protein of unknown function (DUF3029) DK885_RS20310 PF04055 Radical SAM superfamily DK885_RS20315 PF01026 TatD related DNase DK885_RS20320 PF01734 Patatin-like phospholipase DK885_RS20325 PF07043 Protein of unknown function (DUF1328) DK885_RS20330 PF04972 BON domain DK885_RS20335 PF00009 Elongation factor Tu GTP binding domain DK885_RS20335 PF03144 Elongation factor Tu domain 2 DK885_RS20335 PF16658 Class II release factor RF3, C-terminal domain DK885_RS20340 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS20345 PF00583 Acetyltransferase (GNAT) family DK885_RS20350 PF03603 DNA polymerase III psi subunit DK885_RS20355 PF08468 Methyltransferase small domain N-terminal DK885_RS20355 PF05175 Methyltransferase small domain DK885_RS20375 PF07256 Protein of unknown function (DUF1435) DK885_RS20380 PF11575 FhuF 2Fe-2S C-terminal domain DK885_RS20380 PF06276 Ferric iron reductase FhuF-like transporter DK885_RS20385 PF00196 Bacterial regulatory proteins, luxR family DK885_RS20390 PF00196 Bacterial regulatory proteins, luxR family DK885_RS20395 PF06738 Putative threonine/serine exporter DK885_RS20400 PF12821 Threonine/Serine exporter, ThrE DK885_RS20405 PF17948 DnaT DNA-binding domain DK885_RS20410 PF01695 IstB-like ATP binding protein DK885_RS20415 PF10696 Protein of unknown function (DUF2501) DK885_RS20420 PF00884 Sulfatase DK885_RS20425 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS20425 PF00107 Zinc-binding dehydrogenase DK885_RS20430 PF00392 Bacterial regulatory proteins, gntR family DK885_RS20430 PF07729 FCD domain DK885_RS20435 PF07690 Major Facilitator Superfamily DK885_RS20440 PF00672 HAMP domain DK885_RS20440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DK885_RS20440 PF02203 Tar ligand binding domain homologue DK885_RS20450 PF13722 5TM C-terminal transporter carbon starvation CstA DK885_RS20450 PF02554 Carbon starvation protein CstA DK885_RS20455 PF04328 Selenoprotein, putative DK885_RS20460 PF02492 CobW/HypB/UreG, nucleotide-binding domain DK885_RS20460 PF07683 Cobalamin synthesis protein cobW C-terminal domain DK885_RS20465 PF14338 Mrr N-terminal domain DK885_RS20465 PF04471 Restriction endonuclease DK885_RS20470 PF08463 EcoEI R protein C-terminal DK885_RS20470 PF00271 Helicase conserved C-terminal domain DK885_RS20470 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DK885_RS20470 PF04851 Type III restriction enzyme, res subunit DK885_RS20475 PF02384 N-6 DNA Methylase DK885_RS20480 PF01420 Type I restriction modification DNA specificity domain DK885_RS20485 PF08845 Toxin SymE, type I toxin-antitoxin system DK885_RS20490 PF12102 Domain of unknown function (DUF3578) DK885_RS20490 PF07728 AAA domain (dynein-related subfamily) DK885_RS20495 PF10117 McrBC 5-methylcytosine restriction system component DK885_RS20515 PF06568 Domain of unknown function (DUF1127) DK885_RS20520 PF00392 Bacterial regulatory proteins, gntR family DK885_RS20520 PF00155 Aminotransferase class I and II DK885_RS20530 PF07690 Major Facilitator Superfamily DK885_RS20535 PF04286 Protein of unknown function (DUF445) DK885_RS20540 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DK885_RS20545 PF01869 BadF/BadG/BcrA/BcrD ATPase family DK885_RS20555 PF06977 SdiA-regulated DK885_RS20560 PF06779 Uncharacterised MFS-type transporter YbfB DK885_RS20565 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family DK885_RS20575 PF07670 Nucleoside recognition DK885_RS20580 PF07670 Nucleoside recognition DK885_RS20585 PF01979 Amidohydrolase family DK885_RS20590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS20590 PF03466 LysR substrate binding domain DK885_RS20595 PF04965 Gene 25-like lysozyme DK885_RS20605 PF10887 Protein of unknown function (DUF2686) DK885_RS20610 PF00392 Bacterial regulatory proteins, gntR family DK885_RS20610 PF07729 FCD domain DK885_RS20620 PF08125 Mannitol dehydrogenase C-terminal domain DK885_RS20620 PF01232 Mannitol dehydrogenase Rossmann domain DK885_RS20625 PF03786 D-mannonate dehydratase (UxuA) DK885_RS20635 PF02447 GntP family permease DK885_RS20640 PF00419 Fimbrial protein DK885_RS20640 PF09160 FimH, mannose binding DK885_RS20650 PF00419 Fimbrial protein DK885_RS20655 PF13953 PapC C-terminal domain DK885_RS20655 PF00577 Outer membrane usher protein DK885_RS20655 PF13954 PapC N-terminal domain DK885_RS20660 PF02753 Pili assembly chaperone PapD, C-terminal domain DK885_RS20660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DK885_RS20665 PF00419 Fimbrial protein DK885_RS20670 PF00419 Fimbrial protein DK885_RS20680 PF00589 Phage integrase family DK885_RS20695 PF00589 Phage integrase family DK885_RS20710 PF06178 Oligogalacturonate-specific porin protein (KdgM) DK885_RS20720 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase DK885_RS20725 PF13091 PLD-like domain DK885_RS20725 PF13087 AAA domain DK885_RS20745 PF09857 Putative toxin of bacterial toxin-antitoxin pair DK885_RS20750 PF00583 Acetyltransferase (GNAT) family DK885_RS20755 PF13847 Methyltransferase domain DK885_RS20765 PF05343 M42 glutamyl aminopeptidase DK885_RS20770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS20775 PF03611 PTS system sugar-specific permease component DK885_RS20780 PF03437 BtpA family DK885_RS20785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS20790 PF00834 Ribulose-phosphate 3 epimerase family DK885_RS20795 PF00455 DeoR C terminal sensor domain DK885_RS20795 PF08220 DeoR-like helix-turn-helix domain DK885_RS20800 PF01614 Bacterial transcriptional regulator DK885_RS20805 PF00701 Dihydrodipicolinate synthetase family DK885_RS20810 PF00920 Dehydratase family DK885_RS20815 PF02447 GntP family permease DK885_RS20825 PF04198 Putative sugar-binding domain DK885_RS20840 PF04542 Sigma-70 region 2 DK885_RS20840 PF08281 Sigma-70, region 4 DK885_RS20845 PF04773 FecR protein DK885_RS20845 PF16220 Domain of unknown function (DUF4880) DK885_RS20850 PF00593 TonB dependent receptor DK885_RS20850 PF07715 TonB-dependent Receptor Plug Domain DK885_RS20850 PF07660 Secretin and TonB N terminus short domain DK885_RS20855 PF01497 Periplasmic binding protein DK885_RS20860 PF01032 FecCD transport family DK885_RS20865 PF01032 FecCD transport family DK885_RS20870 PF00005 ABC transporter DK885_RS20885 PF01527 Transposase DK885_RS20890 PF00665 Integrase core domain DK885_RS20890 PF13936 Helix-turn-helix domain DK885_RS20910 PF16747 Surface-adhesin protein E DK885_RS20920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DK885_RS20920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK885_RS20925 PF07690 Major Facilitator Superfamily DK885_RS20930 PF13006 Insertion element 4 transposase N-terminal DK885_RS20930 PF01609 Transposase DDE domain DK885_RS20970 PF00589 Phage integrase family DK885_RS20970 PF13356 Arm DNA-binding domain DK885_RS20985 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS20985 PF00107 Zinc-binding dehydrogenase DK885_RS20990 PF01202 Shikimate kinase DK885_RS20995 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS20995 PF00107 Zinc-binding dehydrogenase DK885_RS21000 PF00106 short chain dehydrogenase DK885_RS21005 PF02447 GntP family permease DK885_RS21010 PF00356 Bacterial regulatory proteins, lacI family DK885_RS21015 PF05872 Bacterial protein of unknown function (DUF853) DK885_RS21020 PF03739 Lipopolysaccharide export system permease LptF/LptG DK885_RS21025 PF03739 Lipopolysaccharide export system permease LptF/LptG DK885_RS21030 PF02789 Cytosol aminopeptidase family, N-terminal domain DK885_RS21030 PF00883 Cytosol aminopeptidase family, catalytic domain DK885_RS21035 PF04364 DNA polymerase III chi subunit, HolC DK885_RS21040 PF08264 Anticodon-binding domain of tRNA DK885_RS21040 PF10458 Valyl tRNA synthetase tRNA binding arm DK885_RS21040 PF00133 tRNA synthetases class I (I, L, M and V) DK885_RS21045 PF05987 Bacterial protein of unknown function (DUF898) DK885_RS21050 PF00583 Acetyltransferase (GNAT) family DK885_RS21055 PF06877 Regulator of ribonuclease activity B DK885_RS21060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK885_RS21060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK885_RS21070 PF04074 YhcH/YjgK/YiaL DK885_RS21075 PF00440 Bacterial regulatory proteins, tetR family DK885_RS21085 PF01042 Endoribonuclease L-PSP DK885_RS21095 PF08052 PyrBI operon leader peptide DK885_RS21100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK885_RS21100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK885_RS21105 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DK885_RS21105 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DK885_RS21110 PF01042 Endoribonuclease L-PSP DK885_RS21115 PF00690 Cation transporter/ATPase, N-terminus DK885_RS21115 PF00689 Cation transporting ATPase, C-terminus DK885_RS21120 PF17059 MgtA leader peptide DK885_RS21125 PF00356 Bacterial regulatory proteins, lacI family DK885_RS21130 PF02378 Phosphotransferase system, EIIC DK885_RS21130 PF00367 phosphotransferase system, EIIB DK885_RS21135 PF11941 Domain of unknown function (DUF3459) DK885_RS21135 PF00128 Alpha amylase, catalytic domain DK885_RS21140 PF13597 Anaerobic ribonucleoside-triphosphate reductase DK885_RS21140 PF03477 ATP cone domain DK885_RS21150 PF07361 Cytochrome b562 DK885_RS21155 PF01523 Putative modulator of DNA gyrase DK885_RS21160 PF04751 Protein of unknown function (DUF615) DK885_RS21165 PF01225 Mur ligase family, catalytic domain DK885_RS21165 PF02875 Mur ligase family, glutamate ligase domain DK885_RS21165 PF08245 Mur ligase middle domain DK885_RS21170 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DK885_RS21175 PF02653 Branched-chain amino acid transport system / permease component DK885_RS21180 PF02653 Branched-chain amino acid transport system / permease component DK885_RS21185 PF00005 ABC transporter DK885_RS21190 PF13407 Periplasmic binding protein domain DK885_RS21195 PF00719 Inorganic pyrophosphatase DK885_RS21200 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DK885_RS21205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DK885_RS21210 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DK885_RS21215 PF04357 TamB, inner membrane protein subunit of TAM complex DK885_RS21220 PF17243 POTRA domain TamA domain 1 DK885_RS21220 PF07244 Surface antigen variable number repeat DK885_RS21220 PF01103 Surface antigen DK885_RS21230 PF01625 Peptide methionine sulfoxide reductase DK885_RS21235 PF01595 Cyclin M transmembrane N-terminal domain DK885_RS21235 PF03471 Transporter associated domain DK885_RS21235 PF00571 CBS domain DK885_RS21240 PF06526 Protein of unknown function (DUF1107) DK885_RS21245 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) DK885_RS21260 PF00459 Inositol monophosphatase family DK885_RS21265 PF02872 5'-nucleotidase, C-terminal domain DK885_RS21265 PF00149 Calcineurin-like phosphoesterase DK885_RS21270 PF01638 HxlR-like helix-turn-helix DK885_RS21275 PF05368 NmrA-like family DK885_RS21280 PF00892 EamA-like transporter family DK885_RS21285 PF01814 Hemerythrin HHE cation binding domain DK885_RS21285 PF04405 Domain of Unknown function (DUF542) DK885_RS21290 PF00324 Amino acid permease DK885_RS21295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DK885_RS21295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DK885_RS21305 PF08525 Opacity-associated protein A N-terminal motif DK885_RS21305 PF04225 Opacity-associated protein A LysM-like domain DK885_RS21310 PF17938 Tetracyclin repressor-like, C-terminal domain DK885_RS21320 PF10887 Protein of unknown function (DUF2686) DK885_RS21325 PF03948 Ribosomal protein L9, C-terminal domain DK885_RS21325 PF01281 Ribosomal protein L9, N-terminal domain DK885_RS21330 PF01084 Ribosomal protein S18 DK885_RS21335 PF00436 Single-strand binding protein family DK885_RS21340 PF01250 Ribosomal protein S6 DK885_RS21345 PF07338 Protein of unknown function (DUF1471) DK885_RS21350 PF00596 Class II Aldolase and Adducin N-terminal domain DK885_RS21355 PF01261 Xylose isomerase-like TIM barrel DK885_RS21360 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DK885_RS21365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS21370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS21375 PF03611 PTS system sugar-specific permease component DK885_RS21385 PF08220 DeoR-like helix-turn-helix domain DK885_RS21385 PF00455 DeoR C terminal sensor domain DK885_RS21390 PF00326 Prolyl oligopeptidase family DK885_RS21395 PF07338 Protein of unknown function (DUF1471) DK885_RS21400 PF07338 Protein of unknown function (DUF1471) DK885_RS21410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DK885_RS21410 PF18158 Adaptive response protein AidB N-terminal domain DK885_RS21410 PF02770 Acyl-CoA dehydrogenase, middle domain DK885_RS21415 PF03738 Glutathionylspermidine synthase preATP-grasp DK885_RS21420 PF06693 Protein of unknown function (DUF1190) DK885_RS21425 PF03994 Domain of Unknown Function (DUF350) DK885_RS21430 PF10679 Protein of unknown function (DUF2491) DK885_RS21435 PF04012 PspA/IM30 family DK885_RS21440 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) DK885_RS21450 PF00588 SpoU rRNA Methylase family DK885_RS21450 PF08032 RNA 2'-O ribose methyltransferase substrate binding DK885_RS21455 PF00575 S1 RNA binding domain DK885_RS21455 PF08461 Ribonuclease R winged-helix domain DK885_RS21455 PF17876 Cold shock domain DK885_RS21455 PF08206 Ribonuclease B OB domain DK885_RS21455 PF00773 RNB domain DK885_RS21460 PF02082 Transcriptional regulator DK885_RS21465 PF00709 Adenylosuccinate synthetase DK885_RS21470 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DK885_RS21475 PF01145 SPFH domain / Band 7 family DK885_RS21480 PF01145 SPFH domain / Band 7 family DK885_RS21480 PF12221 Bacterial membrane protein N terminal DK885_RS21485 PF01926 50S ribosome-binding GTPase DK885_RS21485 PF16360 GTP-binding GTPase Middle Region DK885_RS21485 PF13167 GTP-binding GTPase N-terminal DK885_RS21490 PF17209 Hfq protein DK885_RS21500 PF08676 MutL C terminal dimerisation domain DK885_RS21500 PF01119 DNA mismatch repair protein, C-terminal domain DK885_RS21505 PF01520 N-acetylmuramoyl-L-alanine amidase DK885_RS21510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DK885_RS21515 PF01256 Carbohydrate kinase DK885_RS21515 PF03853 YjeF-related protein N-terminus DK885_RS21520 PF08331 Domain of unknown function (DUF1730) DK885_RS21545 PF00929 Exonuclease DK885_RS21550 PF03193 RsgA GTPase DK885_RS21555 PF02666 Phosphatidylserine decarboxylase DK885_RS21560 PF12794 Mechanosensitive ion channel inner membrane domain 1 DK885_RS21560 PF00924 Mechanosensitive ion channel DK885_RS21560 PF12795 Mechanosensitive ion channel porin domain DK885_RS21565 PF10840 Protein of unknown function (DUF2645) DK885_RS21575 PF13520 Amino acid permease DK885_RS21580 PF00152 tRNA synthetases class II (D, K and N) DK885_RS21585 PF00890 FAD binding domain DK885_RS21585 PF02910 Fumarate reductase flavoprotein C-term DK885_RS21590 PF13085 2Fe-2S iron-sulfur cluster binding domain DK885_RS21590 PF13183 4Fe-4S dicluster domain DK885_RS21595 PF02300 Fumarate reductase subunit C DK885_RS21600 PF02313 Fumarate reductase subunit D DK885_RS21605 PF00144 Beta-lactamase DK885_RS21610 PF08212 Lipocalin-like domain DK885_RS21615 PF00893 Small Multidrug Resistance protein DK885_RS21620 PF08085 Entericidin EcnA/B family DK885_RS21625 PF08085 Entericidin EcnA/B family DK885_RS21630 PF09285 Elongation factor P, C-terminal DK885_RS21630 PF08207 Elongation factor P (EF-P) KOW-like domain DK885_RS21630 PF01132 Elongation factor P (EF-P) OB domain DK885_RS21635 PF04055 Radical SAM superfamily DK885_RS21640 PF15922 YjeJ-like DK885_RS21645 PF13698 Domain of unknown function (DUF4156) DK885_RS21650 PF00118 TCP-1/cpn60 chaperonin family DK885_RS21655 PF00166 Chaperonin 10 Kd subunit DK885_RS21660 PF13520 Amino acid permease DK885_RS21665 PF04186 FxsA cytoplasmic membrane protein DK885_RS21670 PF10415 Fumarase C C-terminus DK885_RS21670 PF00206 Lyase DK885_RS21675 PF03605 Anaerobic c4-dicarboxylate membrane transporter DK885_RS21680 PF03091 CutA1 divalent ion tolerance protein DK885_RS21685 PF11412 Disulphide bond corrector protein DsbC DK885_RS21685 PF02683 Cytochrome C biogenesis protein transmembrane region DK885_RS21705 PF18500 CadC C-terminal domain 1 DK885_RS21705 PF00486 Transcriptional regulatory protein, C terminal DK885_RS21710 PF13520 Amino acid permease DK885_RS21715 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DK885_RS21715 PF01276 Orn/Lys/Arg decarboxylase, major domain DK885_RS21715 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DK885_RS21720 PF00854 POT family DK885_RS21725 PF01336 OB-fold nucleic acid binding domain DK885_RS21725 PF00152 tRNA synthetases class II (D, K and N) DK885_RS21730 PF10753 Toxin GhoT_OrtT DK885_RS21735 PF11080 Endoribonuclease GhoS DK885_RS21745 PF14542 GCN5-related N-acetyl-transferase DK885_RS21750 PF06902 Divergent 4Fe-4S mono-cluster DK885_RS21755 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DK885_RS21755 PF17203 Single cache domain 3 DK885_RS21755 PF00989 PAS fold DK885_RS21755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS21760 PF00072 Response regulator receiver domain DK885_RS21770 PF03605 Anaerobic c4-dicarboxylate membrane transporter DK885_RS21775 PF05683 Fumarase C-terminus DK885_RS21775 PF05681 Fumarate hydratase (Fumerase) DK885_RS21780 PF09997 Predicted membrane protein (DUF2238) DK885_RS21790 PF02056 Family 4 glycosyl hydrolase DK885_RS21790 PF11975 Family 4 glycosyl hydrolase C-terminal domain DK885_RS21795 PF12833 Helix-turn-helix domain DK885_RS21800 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DK885_RS21800 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DK885_RS21800 PF01276 Orn/Lys/Arg decarboxylase, major domain DK885_RS21805 PF12833 Helix-turn-helix domain DK885_RS21810 PF13520 Amino acid permease DK885_RS21815 PF00884 Sulfatase DK885_RS21815 PF08019 Phosphoethanolamine transferase EptA/EptB DK885_RS21820 PF00072 Response regulator receiver domain DK885_RS21820 PF00486 Transcriptional regulatory protein, C terminal DK885_RS21825 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS21825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS21835 PF08946 Osmosensory transporter coiled coil DK885_RS21835 PF00083 Sugar (and other) transporter DK885_RS21840 PF13990 YjcZ-like protein DK885_RS21845 PF00350 Dynamin family DK885_RS21855 PF03831 PhnA domain DK885_RS21855 PF08274 PhnA Zinc-Ribbon DK885_RS21860 PF06983 3-demethylubiquinone-9 3-methyltransferase DK885_RS21865 PF00005 ABC transporter DK885_RS21880 PF00392 Bacterial regulatory proteins, gntR family DK885_RS21880 PF07702 UTRA domain DK885_RS21885 PF06754 Phosphonate metabolism protein PhnG DK885_RS21890 PF05845 Bacterial phosphonate metabolism protein (PhnH) DK885_RS21895 PF05861 Bacterial phosphonate metabolism protein (PhnI) DK885_RS21900 PF06007 Phosphonate metabolism protein PhnJ DK885_RS21905 PF00005 ABC transporter DK885_RS21910 PF00005 ABC transporter DK885_RS21915 PF07969 Amidohydrolase family DK885_RS21925 PF00583 Acetyltransferase (GNAT) family DK885_RS21930 PF12706 Beta-lactamase superfamily domain DK885_RS21940 PF02502 Ribose/Galactose Isomerase DK885_RS21950 PF01380 SIS domain DK885_RS21950 PF01418 Helix-turn-helix domain, rpiR family DK885_RS21955 PF13407 Periplasmic binding protein domain DK885_RS21960 PF00005 ABC transporter DK885_RS21965 PF02653 Branched-chain amino acid transport system / permease component DK885_RS21970 PF00834 Ribulose-phosphate 3 epimerase family DK885_RS21975 PF00480 ROK family DK885_RS21980 PF14863 Alkyl sulfatase dimerisation DK885_RS21980 PF14864 Alkyl sulfatase C-terminal DK885_RS21980 PF00753 Metallo-beta-lactamase superfamily DK885_RS21985 PF17090 Uncharacterised protein family DK885_RS21990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK885_RS21990 PF00529 HlyD membrane-fusion protein of T1SS DK885_RS21995 PF04632 Fusaric acid resistance protein family DK885_RS22000 PF02321 Outer membrane efflux protein DK885_RS22010 PF08238 Sel1 repeat DK885_RS22015 PF00375 Sodium:dicarboxylate symporter family DK885_RS22030 PF03918 Cytochrome C biogenesis protein DK885_RS22035 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DK885_RS22035 PF01578 Cytochrome C assembly protein DK885_RS22040 PF03916 Polysulphide reductase, NrfD DK885_RS22045 PF00037 4Fe-4S binding domain DK885_RS22045 PF13247 4Fe-4S dicluster domain DK885_RS22050 PF13435 Cytochrome c554 and c-prime DK885_RS22050 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) DK885_RS22055 PF02335 Cytochrome c552 DK885_RS22065 PF00501 AMP-binding enzyme DK885_RS22065 PF16177 Acetyl-coenzyme A synthetase N-terminus DK885_RS22065 PF13193 AMP-binding enzyme C-terminal domain DK885_RS22070 PF04341 Protein of unknown function, DUF485 DK885_RS22075 PF00474 Sodium:solute symporter family DK885_RS22080 PF00805 Pentapeptide repeats (8 copies) DK885_RS22085 PF00999 Sodium/hydrogen exchanger family DK885_RS22090 PF00860 Permease family DK885_RS22110 PF00376 MerR family regulatory protein DK885_RS22110 PF09278 MerR, DNA binding DK885_RS22115 PF12833 Helix-turn-helix domain DK885_RS22120 PF12792 CSS motif domain associated with EAL DK885_RS22120 PF00563 EAL domain DK885_RS22130 PF15940 Family of unknown function DK885_RS22135 PF00436 Single-strand binding protein family DK885_RS22140 PF00005 ABC transporter DK885_RS22140 PF17760 UvrA interaction domain DK885_RS22140 PF17755 UvrA DNA-binding domain DK885_RS22145 PF04237 YjbR DK885_RS22150 PF01894 Uncharacterised protein family UPF0047 DK885_RS22155 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DK885_RS22165 PF00155 Aminotransferase class I and II DK885_RS22170 PF01168 Alanine racemase, N-terminal domain DK885_RS22170 PF00842 Alanine racemase, C-terminal domain DK885_RS22175 PF00772 DnaB-like helicase N terminal domain DK885_RS22175 PF03796 DnaB-like helicase C terminal domain DK885_RS22180 PF08240 Alcohol dehydrogenase GroES-like domain DK885_RS22180 PF00107 Zinc-binding dehydrogenase DK885_RS22185 PF09583 Phage shock protein G (Phageshock_PspG) DK885_RS22190 PF01207 Dihydrouridine synthase (Dus) DK885_RS22195 PF10897 Protein of unknown function (DUF2713) DK885_RS22205 PF01475 Ferric uptake regulator family DK885_RS22210 PF05532 CsbD-like DK885_RS22215 PF01554 MatE DK885_RS22220 PF00717 Peptidase S24-like DK885_RS22220 PF01726 LexA DNA binding domain DK885_RS22225 PF01219 Prokaryotic diacylglycerol kinase DK885_RS22230 PF01553 Acyltransferase DK885_RS22235 PF01040 UbiA prenyltransferase family DK885_RS22240 PF04345 Chorismate lyase DK885_RS22255 PF07148 Maltose operon periplasmic protein precursor (MalM) DK885_RS22260 PF02264 LamB porin DK885_RS22265 PF17912 MalK OB fold domain DK885_RS22265 PF00005 ABC transporter DK885_RS22275 PF01547 Bacterial extracellular solute-binding protein DK885_RS22280 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS22280 PF14785 Maltose transport system permease protein MalF P2 domain DK885_RS22285 PF00528 Binding-protein-dependent transport system inner membrane component DK885_RS22290 PF00083 Sugar (and other) transporter DK885_RS22295 PF06146 Phosphate-starvation-inducible E DK885_RS22300 PF17089 Uncharacterised protein family DK885_RS22305 PF06082 Exopolysaccharide biosynthesis protein YbjH DK885_RS22310 PF06251 Capsule biosynthesis GfcC DK885_RS22315 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF DK885_RS22320 PF11106 Exopolysaccharide production protein YjbE DK885_RS22325 PF00342 Phosphoglucose isomerase DK885_RS22335 PF01842 ACT domain DK885_RS22335 PF00696 Amino acid kinase family DK885_RS22340 PF11656 YjbD family (DUF3811) DK885_RS22345 PF00849 RNA pseudouridylate synthase DK885_RS22345 PF01479 S4 domain DK885_RS22350 PF03575 Peptidase family S51 DK885_RS22355 PF02690 Na+/Pi-cotransporter DK885_RS22360 PF02310 B12 binding domain DK885_RS22360 PF02574 Homocysteine S-methyltransferase DK885_RS22360 PF00809 Pterin binding enzyme DK885_RS22360 PF02607 B12 binding domain DK885_RS22360 PF02965 Vitamin B12 dependent methionine synthase, activation domain DK885_RS22365 PF09339 IclR helix-turn-helix domain DK885_RS22365 PF01614 Bacterial transcriptional regulator DK885_RS22370 PF07906 ShET2 enterotoxin, N-terminal region DK885_RS22375 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DK885_RS22380 PF00463 Isocitrate lyase family DK885_RS22385 PF01274 Malate synthase DK885_RS22390 PF04204 Homoserine O-succinyltransferase DK885_RS22395 PF13673 Acetyltransferase (GNAT) domain DK885_RS22430 PF01808 AICARFT/IMPCHase bienzyme DK885_RS22430 PF02142 MGS-like domain DK885_RS22435 PF02844 Phosphoribosylglycinamide synthetase, N domain DK885_RS22435 PF02843 Phosphoribosylglycinamide synthetase, C domain DK885_RS22435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DK885_RS22440 PF00072 Response regulator receiver domain DK885_RS22440 PF02954 Bacterial regulatory protein, Fis family DK885_RS22440 PF00158 Sigma-54 interaction domain DK885_RS22445 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS22445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS22455 PF13801 Heavy-metal resistance DK885_RS22460 PF07356 Protein of unknown function (DUF1481) DK885_RS22465 PF00216 Bacterial DNA-binding protein DK885_RS22470 PF04222 Protein of unknown function (DUF416) DK885_RS22475 PF04493 Endonuclease V DK885_RS22480 PF01208 Uroporphyrinogen decarboxylase (URO-D) DK885_RS22485 PF09297 NADH pyrophosphatase zinc ribbon domain DK885_RS22485 PF00293 NUDIX domain DK885_RS22490 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DK885_RS22495 PF13667 ThiC-associated domain DK885_RS22495 PF01964 Radical SAM ThiC family DK885_RS22500 PF02581 Thiamine monophosphate synthase DK885_RS22505 PF00899 ThiF family DK885_RS22510 PF02597 ThiS family DK885_RS22515 PF05690 Thiazole biosynthesis protein ThiG DK885_RS22520 PF04055 Radical SAM superfamily DK885_RS22520 PF06968 Biotin and Thiamin Synthesis associated domain DK885_RS22530 PF04998 RNA polymerase Rpb1, domain 5 DK885_RS22530 PF05000 RNA polymerase Rpb1, domain 4 DK885_RS22530 PF04983 RNA polymerase Rpb1, domain 3 DK885_RS22530 PF00623 RNA polymerase Rpb1, domain 2 DK885_RS22530 PF04997 RNA polymerase Rpb1, domain 1 DK885_RS22535 PF04565 RNA polymerase Rpb2, domain 3 DK885_RS22535 PF10385 RNA polymerase beta subunit external 1 domain DK885_RS22535 PF00562 RNA polymerase Rpb2, domain 6 DK885_RS22535 PF04563 RNA polymerase beta subunit DK885_RS22535 PF04561 RNA polymerase Rpb2, domain 2 DK885_RS22535 PF04560 RNA polymerase Rpb2, domain 7 DK885_RS22540 PF16320 Ribosomal protein L7/L12 dimerisation domain DK885_RS22540 PF00542 Ribosomal protein L7/L12 C-terminal domain DK885_RS22545 PF00466 Ribosomal protein L10 DK885_RS22555 PF00687 Ribosomal protein L1p/L10e family DK885_RS22560 PF00298 Ribosomal protein L11, RNA binding domain DK885_RS22560 PF03946 Ribosomal protein L11, N-terminal domain DK885_RS22565 PF02357 Transcription termination factor nusG DK885_RS22565 PF00467 KOW motif DK885_RS22570 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DK885_RS22575 PF03143 Elongation factor Tu C-terminal domain DK885_RS22575 PF03144 Elongation factor Tu domain 2 DK885_RS22575 PF00009 Elongation factor Tu GTP binding domain DK885_RS22610 PF00485 Phosphoribulokinase / Uridine kinase family DK885_RS22615 PF08279 HTH domain DK885_RS22615 PF02237 Biotin protein ligase C terminal domain DK885_RS22615 PF03099 Biotin/lipoate A/B protein ligase family DK885_RS22620 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DK885_RS22620 PF01565 FAD binding domain DK885_RS22645 PF01177 Asp/Glu/Hydantoin racemase DK885_RS22650 PF00593 TonB dependent receptor DK885_RS22650 PF07715 TonB-dependent Receptor Plug Domain DK885_RS22655 PF05958 tRNA (Uracil-5-)-methyltransferase DK885_RS22660 PF07226 Protein of unknown function (DUF1422) DK885_RS22665 PF00440 Bacterial regulatory proteins, tetR family DK885_RS22675 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK885_RS22675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK885_RS22680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS22680 PF03466 LysR substrate binding domain DK885_RS22685 PF00206 Lyase DK885_RS22685 PF14698 Argininosuccinate lyase C-terminal DK885_RS22690 PF00696 Amino acid kinase family DK885_RS22695 PF01118 Semialdehyde dehydrogenase, NAD binding domain DK885_RS22695 PF02774 Semialdehyde dehydrogenase, dimerisation domain DK885_RS22700 PF01546 Peptidase family M20/M25/M40 DK885_RS22700 PF07687 Peptidase dimerisation domain DK885_RS22710 PF00311 Phosphoenolpyruvate carboxylase DK885_RS22715 PF00884 Sulfatase DK885_RS22720 PF12833 Helix-turn-helix domain DK885_RS22725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS22730 PF04055 Radical SAM superfamily DK885_RS22735 PF02901 Pyruvate formate lyase-like DK885_RS22735 PF01228 Glycine radical DK885_RS22740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS22750 PF00391 PEP-utilising enzyme, mobile domain DK885_RS22750 PF05524 PEP-utilising enzyme, N-terminal DK885_RS22750 PF02896 PEP-utilising enzyme, TIM barrel domain DK885_RS22750 PF00381 PTS HPr component phosphorylation site DK885_RS22750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS22755 PF00923 Transaldolase/Fructose-6-phosphate aldolase DK885_RS22760 PF00465 Iron-containing alcohol dehydrogenase DK885_RS22765 PF06940 Domain of unknown function (DUF1287) DK885_RS22770 PF00892 EamA-like transporter family DK885_RS22775 PF00141 Peroxidase DK885_RS22780 PF02219 Methylenetetrahydrofolate reductase DK885_RS22785 PF00696 Amino acid kinase family DK885_RS22785 PF00742 Homoserine dehydrogenase DK885_RS22785 PF03447 Homoserine dehydrogenase, NAD binding domain DK885_RS22790 PF01053 Cys/Met metabolism PLP-dependent enzyme DK885_RS22795 PF01340 Met Apo-repressor, MetJ DK885_RS22800 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DK885_RS22805 PF01197 Ribosomal protein L31 DK885_RS22810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DK885_RS22810 PF00270 DEAD/DEAH box helicase DK885_RS22810 PF17764 3′ DNA-binding domain (3′BD) DK885_RS22810 PF00271 Helicase conserved C-terminal domain DK885_RS22810 PF18074 Primosomal protein N C-terminal domain DK885_RS22815 PF00356 Bacterial regulatory proteins, lacI family DK885_RS22820 PF05036 Sporulation related domain DK885_RS22825 PF00227 Proteasome subunit DK885_RS22830 PF07724 AAA domain (Cdc48 subfamily) DK885_RS22830 PF00004 ATPase family associated with various cellular activities (AAA) DK885_RS22830 PF10431 C-terminal, D2-small domain, of ClpB protein DK885_RS22835 PF01040 UbiA prenyltransferase family DK885_RS22840 PF03737 Aldolase/RraA DK885_RS22845 PF06005 Cell division protein ZapB DK885_RS22850 PF00230 Major intrinsic protein DK885_RS22855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK885_RS22855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS22860 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DK885_RS22865 PF00970 Oxidoreductase FAD-binding domain DK885_RS22865 PF00175 Oxidoreductase NAD-binding domain DK885_RS22870 PF00582 Universal stress protein family DK885_RS22875 PF04175 Protein of unknown function (DUF406) DK885_RS22880 PF05656 Protein of unknown function (DUF805) DK885_RS22885 PF07305 Protein of unknown function (DUF1454) DK885_RS22890 PF00121 Triosephosphate isomerase DK885_RS22895 PF02611 CDP-diacylglycerol pyrophosphatase DK885_RS22905 PF00365 Phosphofructokinase DK885_RS22910 PF16916 Dimerisation domain of Zinc Transporter DK885_RS22910 PF01545 Cation efflux family DK885_RS22915 PF07813 LTXXQ motif family protein DK885_RS22920 PF00072 Response regulator receiver domain DK885_RS22920 PF00486 Transcriptional regulatory protein, C terminal DK885_RS22925 PF00672 HAMP domain DK885_RS22925 PF16527 Two-component sensor protein CpxA, periplasmic domain DK885_RS22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS22925 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS22930 PF03473 MOSC domain DK885_RS22930 PF03475 3-alpha domain DK885_RS22935 PF03812 2-keto-3-deoxygluconate permease DK885_RS22945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DK885_RS22945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DK885_RS22950 PF06379 L-rhamnose-proton symport protein (RhaT) DK885_RS22955 PF02311 AraC-like ligand binding domain DK885_RS22955 PF12833 Helix-turn-helix domain DK885_RS22960 PF12833 Helix-turn-helix domain DK885_RS22960 PF02311 AraC-like ligand binding domain DK885_RS22965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK885_RS22965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK885_RS22970 PF06134 L-rhamnose isomerase (RhaA) DK885_RS22975 PF00596 Class II Aldolase and Adducin N-terminal domain DK885_RS22980 PF05336 L-rhamnose mutarotase DK885_RS22985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS22990 PF02378 Phosphotransferase system, EIIC DK885_RS22990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK885_RS22995 PF05343 M42 glutamyl aminopeptidase DK885_RS23000 PF08279 HTH domain DK885_RS23000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK885_RS23005 PF12889 Protein of unknown function (DUF3829) DK885_RS23010 PF02634 FdhD/NarQ family DK885_RS23020 PF01568 Molydopterin dinucleotide binding domain DK885_RS23020 PF00384 Molybdopterin oxidoreductase DK885_RS23020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DK885_RS23025 PF00384 Molybdopterin oxidoreductase DK885_RS23025 PF01568 Molydopterin dinucleotide binding domain DK885_RS23025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DK885_RS23030 PF09163 Formate dehydrogenase N, transmembrane DK885_RS23030 PF13247 4Fe-4S dicluster domain DK885_RS23035 PF01292 Prokaryotic cytochrome b561 DK885_RS23040 PF04216 Protein involved in formate dehydrogenase formation DK885_RS23050 PF01402 Ribbon-helix-helix protein, copG family DK885_RS23055 PF09500 Putative thioesterase (yiiD_Cterm) DK885_RS23055 PF00583 Acetyltransferase (GNAT) family DK885_RS23060 PF02580 D-Tyr-tRNA(Tyr) deacylase DK885_RS23065 PF03631 Virulence factor BrkB DK885_RS23070 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS23075 PF08220 DeoR-like helix-turn-helix domain DK885_RS23075 PF00455 DeoR C terminal sensor domain DK885_RS23080 PF00294 pfkB family carbohydrate kinase DK885_RS23085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DK885_RS23085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DK885_RS23090 PF01791 DeoC/LacD family aldolase DK885_RS23100 PF01263 Aldose 1-epimerase DK885_RS23105 PF01055 Glycosyl hydrolases family 31 DK885_RS23120 PF06178 Oligogalacturonate-specific porin protein (KdgM) DK885_RS23125 PF07690 Major Facilitator Superfamily DK885_RS23130 PF01261 Xylose isomerase-like TIM barrel DK885_RS23135 PF07702 UTRA domain DK885_RS23135 PF00392 Bacterial regulatory proteins, gntR family DK885_RS23140 PF03144 Elongation factor Tu domain 2 DK885_RS23140 PF00009 Elongation factor Tu GTP binding domain DK885_RS23140 PF00679 Elongation factor G C-terminus DK885_RS23150 PF03951 Glutamine synthetase, beta-Grasp domain DK885_RS23150 PF00120 Glutamine synthetase, catalytic domain DK885_RS23155 PF00989 PAS fold DK885_RS23155 PF00512 His Kinase A (phospho-acceptor) domain DK885_RS23155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK885_RS23160 PF02954 Bacterial regulatory protein, Fis family DK885_RS23160 PF00072 Response regulator receiver domain DK885_RS23160 PF00158 Sigma-54 interaction domain DK885_RS23170 PF04055 Radical SAM superfamily DK885_RS23170 PF06969 HemN C-terminal domain DK885_RS23175 PF04220 Der GTPase activator (YihI) DK885_RS23180 PF01926 50S ribosome-binding GTPase DK885_RS23185 PF01367 5'-3' exonuclease, C-terminal SAM fold DK885_RS23185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DK885_RS23185 PF01612 3'-5' exonuclease DK885_RS23185 PF00476 DNA polymerase family A DK885_RS23195 PF01553 Acyltransferase DK885_RS23200 PF06097 Bacterial protein of unknown function (DUF945) DK885_RS23205 PF01323 DSBA-like thioredoxin domain DK885_RS23210 PF01636 Phosphotransferase enzyme family DK885_RS23215 PF06288 Protein of unknown function (DUF1040) DK885_RS23220 PF12804 MobA-like NTP transferase domain DK885_RS23225 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DK885_RS23255 PF12724 Flavodoxin domain DK885_RS23260 PF02386 Cation transport protein DK885_RS23265 PF01205 Uncharacterized protein family UPF0029 DK885_RS23265 PF09186 Domain of unknown function (DUF1949) DK885_RS23270 PF00557 Metallopeptidase family M24 DK885_RS23275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DK885_RS23275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DK885_RS23275 PF00378 Enoyl-CoA hydratase/isomerase DK885_RS23280 PF00108 Thiolase, N-terminal domain DK885_RS23280 PF02803 Thiolase, C-terminal domain DK885_RS23285 PF00175 Oxidoreductase NAD-binding domain DK885_RS23285 PF00970 Oxidoreductase FAD-binding domain DK885_RS23290 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DK885_RS23295 PF02357 Transcription termination factor nusG DK885_RS23300 PF01026 TatD related DNase DK885_RS23305 PF00902 Sec-independent protein translocase protein (TatC) DK885_RS23315 PF02416 mttA/Hcf106 family DK885_RS23320 PF03109 ABC1 family DK885_RS23325 PF02036 SCP-2 sterol transfer family DK885_RS23330 PF01209 ubiE/COQ5 methyltransferase family DK885_RS23335 PF02646 RmuC family DK885_RS23340 PF01048 Phosphorylase superfamily DK885_RS23345 PF01738 Dienelactone hydrolase family DK885_RS23350 PF08267 Cobalamin-independent synthase, N-terminal domain DK885_RS23350 PF01717 Cobalamin-independent synthase, Catalytic domain DK885_RS23355 PF03466 LysR substrate binding domain DK885_RS23355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS23360 PF00892 EamA-like transporter family DK885_RS23370 PF12146 Serine aminopeptidase, S33 DK885_RS23375 PF01810 LysE type translocator DK885_RS23380 PF01810 LysE type translocator DK885_RS23385 PF00270 DEAD/DEAH box helicase DK885_RS23385 PF00271 Helicase conserved C-terminal domain DK885_RS23385 PF00570 HRDC domain DK885_RS23385 PF16124 RecQ zinc-binding DK885_RS23385 PF09382 RQC domain DK885_RS23390 PF02253 Phospholipase A1 DK885_RS23395 PF03061 Thioesterase superfamily DK885_RS23400 PF00892 EamA-like transporter family DK885_RS23410 PF10947 Protein of unknown function (DUF2628) DK885_RS23415 PF01544 CorA-like Mg2+ transporter protein DK885_RS23420 PF09992 Phosphodiester glycosidase DK885_RS23425 PF00580 UvrD/REP helicase N-terminal domain DK885_RS23425 PF13361 UvrD-like helicase C-terminal domain DK885_RS23430 PF13419 Haloacid dehalogenase-like hydrolase DK885_RS23435 PF02899 Phage integrase, N-terminal SAM-like domain DK885_RS23435 PF00589 Phage integrase family DK885_RS23440 PF04340 Protein of unknown function, DUF484 DK885_RS23445 PF01678 Diaminopimelate epimerase DK885_RS23450 PF13627 Prokaryotic lipoprotein-attachment site DK885_RS23455 PF01491 Frataxin-like domain DK885_RS23460 PF12633 Adenylate cyclase NT domain DK885_RS23460 PF01295 Adenylate cyclase, class-I DK885_RS23470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DK885_RS23470 PF03900 Porphobilinogen deaminase, C-terminal domain DK885_RS23475 PF02602 Uroporphyrinogen-III synthase HemD DK885_RS23480 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DK885_RS23485 PF07719 Tetratricopeptide repeat DK885_RS23485 PF07219 HemY protein N-terminus DK885_RS23490 PF00884 Sulfatase DK885_RS23495 PF13186 Iron-sulfur cluster-binding domain DK885_RS23495 PF04055 Radical SAM superfamily DK885_RS23520 PF00324 Amino acid permease DK885_RS23525 PF03808 Glycosyl transferase WecB/TagA/CpsF family DK885_RS23530 PF06899 WzyE protein, O-antigen assembly polymerase DK885_RS23535 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 DK885_RS23540 PF01943 Polysaccharide biosynthesis protein DK885_RS23545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DK885_RS23555 PF00483 Nucleotidyl transferase DK885_RS23560 PF16363 GDP-mannose 4,6 dehydratase DK885_RS23565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DK885_RS23565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DK885_RS23565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DK885_RS23570 PF02350 UDP-N-acetylglucosamine 2-epimerase DK885_RS23575 PF02706 Chain length determinant protein DK885_RS23580 PF00953 Glycosyl transferase family 4 DK885_RS23590 PF07497 Rho termination factor, RNA-binding domain DK885_RS23590 PF07498 Rho termination factor, N-terminal domain DK885_RS23590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK885_RS23600 PF00085 Thioredoxin DK885_RS23605 PF00271 Helicase conserved C-terminal domain DK885_RS23605 PF00270 DEAD/DEAH box helicase DK885_RS23615 PF02541 Ppx/GppA phosphatase family DK885_RS23620 PF00580 UvrD/REP helicase N-terminal domain DK885_RS23620 PF13361 UvrD-like helicase C-terminal domain DK885_RS23635 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DK885_RS23635 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DK885_RS23640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS23640 PF03466 LysR substrate binding domain DK885_RS23645 PF00585 C-terminal regulatory domain of Threonine dehydratase DK885_RS23645 PF00291 Pyridoxal-phosphate dependent enzyme DK885_RS23650 PF00920 Dehydratase family DK885_RS23655 PF01063 Amino-transferase class IV DK885_RS23675 PF08046 IlvGEDA operon leader peptide DK885_RS23685 PF01078 Magnesium chelatase, subunit ChlI DK885_RS23685 PF13335 Magnesium chelatase, subunit ChlI C-terminal DK885_RS23690 PF04219 Protein of unknown function, DUF DK885_RS23695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK885_RS23695 PF03466 LysR substrate binding domain DK885_RS23730 PF00392 Bacterial regulatory proteins, gntR family DK885_RS23730 PF07729 FCD domain DK885_RS23735 PF07690 Major Facilitator Superfamily DK885_RS23740 PF00356 Bacterial regulatory proteins, lacI family DK885_RS23745 PF00294 pfkB family carbohydrate kinase DK885_RS23750 PF13407 Periplasmic binding protein domain DK885_RS23755 PF02653 Branched-chain amino acid transport system / permease component DK885_RS23760 PF00005 ABC transporter DK885_RS23765 PF05025 RbsD / FucU transport protein family DK885_RS23770 PF02705 K+ potassium transporter DK885_RS23775 PF12592 Protein of unknown function (DUF3763) DK885_RS23775 PF17868 AAA lid domain DK885_RS23775 PF07728 AAA domain (dynein-related subfamily) DK885_RS23780 PF05762 VWA domain containing CoxE-like protein DK885_RS23785 PF03590 Aspartate-ammonia ligase DK885_RS23790 PF01037 Lrp/AsnC ligand binding domain DK885_RS23795 PF00258 Flavodoxin