locus-tag	class	description
DK885_RS00015	COG3312	ion transport
DK885_RS00065	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DK885_RS00070	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DK885_RS00075	COG0573	inorganic phosphate transmembrane transporter activity
DK885_RS00080	COG0581	inorganic phosphate transmembrane transporter activity
DK885_RS00085	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DK885_RS00090	COG0704	Plays a role in the regulation of phosphate uptake
DK885_RS00095	COG3711	transcriptional antiterminator
DK885_RS00100	COG2190	(PTS) system
DK885_RS00100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS00100	COG1263	PTS System
DK885_RS00105	COG2723	6-phospho-beta-galactosidase activity
DK885_RS00115	COG2382	esterase
DK885_RS00120	COG0363	glucosamine-6-phosphate deaminase activity
DK885_RS00125	COG3196	Protein conserved in bacteria
DK885_RS00135	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DK885_RS00140	COG2252	PERMEase
DK885_RS00145	COG0431	NADPH-dependent FMN reductase
DK885_RS00150	COG2091	lysine biosynthetic process via aminoadipic acid
DK885_RS00165	COG0814	amino acid
DK885_RS00215	COG0592	DNA-directed DNA polymerase activity
DK885_RS00225	COG0187	DNA topoisomerase II activity
DK885_RS00230	COG3753	Protein conserved in bacteria
DK885_RS00235	COG0561	phosphatase activity
DK885_RS00245	COG2186	Transcriptional regulator
DK885_RS00250	COG3734	2-keto-3-deoxy-galactonokinase
DK885_RS00255	COG0800	Aldolase
DK885_RS00265	COG2271	Major facilitator Superfamily
DK885_RS00270	COG0644	oxidoreductase
DK885_RS00275	COG0823	Involved in the tonB-independent uptake of proteins
DK885_RS00280	COG5645	(Lipo)protein
DK885_RS00300	COG2188	Transcriptional regulator
DK885_RS00315	COG2207	Transcriptional regulator
DK885_RS00320	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DK885_RS00325	COG3119	arylsulfatase activity
DK885_RS00335	COG2149	membrane
DK885_RS00345	COG0641	radical SAM
DK885_RS00350	COG2814	Major facilitator Superfamily
DK885_RS00385	COG0028	Belongs to the TPP enzyme family
DK885_RS00390	COG0440	acetolactate synthase activity
DK885_RS00395	COG2197	response regulator
DK885_RS00400	COG3851	Histidine kinase
DK885_RS00405	COG2271	Major facilitator Superfamily
DK885_RS00410	COG2271	Major facilitator Superfamily
DK885_RS00420	COG2252	PERMEase
DK885_RS00450	COG1464	Belongs to the NlpA lipoprotein family
DK885_RS00455	COG0697	spore germination
DK885_RS00460	COG2814	Major facilitator Superfamily
DK885_RS00475	COG2211	Major facilitator Superfamily
DK885_RS00480	COG1501	Belongs to the glycosyl hydrolase 31 family
DK885_RS00485	COG2982	Protein involved in outer membrane biogenesis
DK885_RS00490	COG2233	PERMEase
DK885_RS00495	COG0786	glutamate:sodium symporter activity
DK885_RS00500	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DK885_RS00505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DK885_RS00510	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DK885_RS00520	COG0194	GDP metabolic process
DK885_RS00530	COG2860	membrane
DK885_RS00535	COG3645	SOS response
DK885_RS00540	COG1561	YicC-like family, N-terminal region
DK885_RS00570	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DK885_RS00600	COG1519	Transferase
DK885_RS00605	COG0859	PFAM glycosyl transferase family 9
DK885_RS00610	COG0438	transferase activity, transferring glycosyl groups
DK885_RS00615	COG0515	serine threonine protein kinase
DK885_RS00620	COG0438	transferase activity, transferring glycosyl groups
DK885_RS00620	COG4641	Protein conserved in bacteria
DK885_RS00625	COG0438	transferase activity, transferring glycosyl groups
DK885_RS00630	COG1442	glycosyl transferase family 8
DK885_RS00635	COG1442	glycosyl transferase family 8
DK885_RS00640	COG3642	lipopolysaccharide core region biosynthetic process
DK885_RS00650	COG0859	PFAM glycosyl transferase family 9
DK885_RS00655	COG3307	-O-antigen
DK885_RS00660	COG0859	PFAM glycosyl transferase family 9
DK885_RS00665	COG0859	PFAM glycosyl transferase family 9
DK885_RS00680	COG0156	8-amino-7-oxononanoate synthase activity
DK885_RS00690	COG1216	Glycosyl transferase, family 2
DK885_RS00695	COG2861	carbohydrate metabolic process
DK885_RS00700	COG4942	peptidase
DK885_RS00705	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DK885_RS00715	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DK885_RS00720	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DK885_RS00735	COG1045	serine acetyltransferase
DK885_RS00740	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DK885_RS00750	COG2186	Transcriptional regulator
DK885_RS00755	COG1620	l-lactate permease
DK885_RS00775	COG3722	fumarate hydratase activity
DK885_RS00785	COG2213	PTS system mannitol-specific
DK885_RS00785	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS00795	COG1566	PFAM secretion protein HlyD family protein
DK885_RS00815	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DK885_RS00825	COG1413	lyase activity
DK885_RS00830	COG3209	COG3209 Rhs family protein
DK885_RS00835	COG0625	glutathione transferase activity
DK885_RS00845	COG3276	selenocysteine insertion sequence binding
DK885_RS00850	COG1454	alcohol dehydrogenase
DK885_RS00855	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS00875	COG1566	PFAM secretion protein HlyD family protein
DK885_RS00880	COG0583	DNA-binding transcription factor activity
DK885_RS00885	COG3713	MltA-interacting MipA family protein
DK885_RS00895	COG0235	Class ii aldolase
DK885_RS00900	COG3623	hexulose-6-phosphate isomerase
DK885_RS00905	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
DK885_RS00910	COG1070	Carbohydrate kinase
DK885_RS00915	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DK885_RS00920	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
DK885_RS00925	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
DK885_RS00930	COG2731	YhcH YjgK YiaL family protein
DK885_RS00940	COG1414	Transcriptional regulator
DK885_RS00945	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS00950	COG3977	Valine--pyruvate aminotransferase
DK885_RS00955	COG0366	Alpha amylase catalytic
DK885_RS00960	COG2992	FlgJ-related protein
DK885_RS00965	COG1609	Transcriptional regulator
DK885_RS00965	COG2207	Transcriptional regulator
DK885_RS00970	COG4214	carbohydrate transport
DK885_RS00975	COG1129	ABC transporter
DK885_RS00980	COG4213	ABC transporter substrate-binding protein
DK885_RS00990	COG1070	Carbohydrate kinase
DK885_RS00995	COG4682	membrane
DK885_RS01000	COG4682	membrane
DK885_RS01005	COG3274	enterobacterial common antigen metabolic process
DK885_RS01035	COG1278	Cold shock
DK885_RS01040	COG2944	sequence-specific DNA binding
DK885_RS01055	COG2885	chlorophyll binding
DK885_RS01060	COG0243	molybdopterin cofactor binding
DK885_RS01065	COG0456	acetyltransferase
DK885_RS01070	COG2818	Glycosylase
DK885_RS01075	COG5571	outer membrane autotransporter
DK885_RS01085	COG2223	nitrite transmembrane transporter activity
DK885_RS01090	COG2194	sulfuric ester hydrolase activity
DK885_RS01110	COG0747	negative chemotaxis
DK885_RS01115	COG0601	transmembrane transport
DK885_RS01120	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DK885_RS01125	COG0444	Belongs to the ABC transporter superfamily
DK885_RS01130	COG4608	Belongs to the ABC transporter superfamily
DK885_RS01135	COG0814	amino acid
DK885_RS01155	COG2194	sulfuric ester hydrolase activity
DK885_RS01180	COG1215	transferase activity, transferring glycosyl groups
DK885_RS01185	COG1215	transferase activity, transferring glycosyl groups
DK885_RS01190	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DK885_RS01195	COG0457	Tetratricopeptide repeat
DK885_RS01195	COG3118	belongs to the thioredoxin family
DK885_RS01200	COG2199	diguanylate cyclase activity
DK885_RS01200	COG2200	EAL domain
DK885_RS01215	COG0612	Peptidase, M16
DK885_RS01220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS01230	COG2200	EAL domain
DK885_RS01235	COG2982	Protein involved in outer membrane biogenesis
DK885_RS01240	COG0477	Major facilitator Superfamily
DK885_RS01245	COG1295	ribonuclease BN
DK885_RS01250	COG0583	DNA-binding transcription factor activity
DK885_RS01255	COG2197	response regulator
DK885_RS01265	COG1858	cytochrome C peroxidase
DK885_RS01270	COG0076	glutamate decarboxylase activity
DK885_RS01275	COG2207	Transcriptional regulator
DK885_RS01280	COG2207	Transcriptional regulator
DK885_RS01290	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DK885_RS01295	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK885_RS01305	COG2771	luxR family
DK885_RS01310	COG3247	response to pH
DK885_RS01325	COG1285	pathogenesis
DK885_RS01330	COG2197	response regulator
DK885_RS01340	COG3065	identical protein binding
DK885_RS01360	COG1393	Belongs to the ArsC family
DK885_RS01365	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DK885_RS01370	COG0640	Transcriptional regulator
DK885_RS01385	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DK885_RS01390	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DK885_RS01395	COG0339	signal peptide processing
DK885_RS01405	COG3104	oligopeptide transport
DK885_RS01415	COG0589	response to stress
DK885_RS01425	COG0306	phosphate transporter
DK885_RS01430	COG2081	HI0933 family
DK885_RS01455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK885_RS01460	COG1129	ABC transporter
DK885_RS01460	COG0842	Transport permease protein
DK885_RS01465	COG0842	Transport permease protein
DK885_RS01470	COG5433	transposase activity
DK885_RS01475	COG1413	lyase activity
DK885_RS01485	COG3209	COG3209 Rhs family protein
DK885_RS01495	COG1124	(ABC) transporter
DK885_RS01500	COG0444	Belongs to the ABC transporter superfamily
DK885_RS01505	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DK885_RS01510	COG0601	transmembrane transport
DK885_RS01515	COG0747	negative chemotaxis
DK885_RS01520	COG2091	lysine biosynthetic process via aminoadipic acid
DK885_RS01525	COG0628	permease
DK885_RS01530	COG0477	Major facilitator Superfamily
DK885_RS01540	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DK885_RS01550	COG2217	Heavy metal translocating P-type atpase
DK885_RS01555	COG3714	YhhN family
DK885_RS01565	COG3776	membrane
DK885_RS01570	COG0742	ribosomal rna small subunit methyltransferase
DK885_RS01575	COG0552	protein localization to endoplasmic reticulum
DK885_RS01580	COG2884	Cell division ATP-binding protein ftsE
DK885_RS01585	COG2177	Part of the ABC transporter FtsEX involved in
DK885_RS01590	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DK885_RS01595	COG0683	leucine binding
DK885_RS01600	COG0456	acetyltransferase
DK885_RS01605	COG0683	leucine binding
DK885_RS01610	COG0559	Belongs to the binding-protein-dependent transport system permease family
DK885_RS01615	COG4177	L-phenylalanine transmembrane transporter activity
DK885_RS01620	COG0411	ABC transporter
DK885_RS01625	COG0410	ABC transporter
DK885_RS01630	COG1653	transport
DK885_RS01635	COG1175	transmembrane transport
DK885_RS01640	COG0395	ABC-type sugar transport system, permease component
DK885_RS01645	COG3842	ATPase activity
DK885_RS01650	COG0584	glycerophosphoryl diester phosphodiesterase
DK885_RS01660	COG0405	Gamma-glutamyltransferase
DK885_RS01685	COG3157	Type VI secretion system effector, Hcp
DK885_RS01690	COG1247	-acetyltransferase
DK885_RS01700	COG0673	inositol 2-dehydrogenase activity
DK885_RS01705	COG1741	Belongs to the pirin family
DK885_RS01710	COG1609	Transcriptional regulator
DK885_RS01715	COG3265	gluconokinase activity
DK885_RS01720	COG2610	gluconate transmembrane transporter activity
DK885_RS01725	COG2095	MarC family integral membrane protein
DK885_RS01730	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DK885_RS01755	COG0058	SHG alpha-glucan phosphorylase activity
DK885_RS01760	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DK885_RS01765	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DK885_RS01780	COG1349	DNA-binding transcription factor activity
DK885_RS01785	COG4650	regulator
DK885_RS01790	COG1690	Belongs to the RtcB family
DK885_RS01805	COG0058	SHG alpha-glucan phosphorylase activity
DK885_RS01810	COG1640	4-alpha-glucanotransferase
DK885_RS01815	COG2610	gluconate transmembrane transporter activity
DK885_RS01825	COG1040	competence protein
DK885_RS01835	COG5464	transposase or invertase
DK885_RS01850	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DK885_RS01855	COG1918	ferrous iron import across plasma membrane
DK885_RS01865	COG2183	response to ionizing radiation
DK885_RS01870	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DK885_RS01900	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
DK885_RS01910	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DK885_RS01915	COG1011	Hydrolase
DK885_RS01925	COG0494	nUDIX hydrolase
DK885_RS01930	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DK885_RS01935	COG4972	Pilus assembly protein
DK885_RS01940	COG3166	PFAM Fimbrial assembly family protein
DK885_RS01955	COG4796	Type ii and iii secretion system protein
DK885_RS01970	COG3266	domain, Protein
DK885_RS01975	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DK885_RS01980	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DK885_RS01985	COG0546	phosphoglycolate phosphatase activity
DK885_RS01990	COG0180	Tryptophanyl-tRNA synthetase
DK885_RS02000	COG2188	Transcriptional regulator
DK885_RS02010	COG3457	Alanine racemase
DK885_RS02015	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
DK885_RS02020	COG1735	metal-dependent hydrolase with the TIM-barrel fold
DK885_RS02035	COG0626	cystathionine gamma-synthase activity
DK885_RS02040	COG2188	Transcriptional regulator
DK885_RS02045	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS02050	COG1082	Xylose isomerase domain protein TIM barrel
DK885_RS02060	COG2222	sugar isomerase
DK885_RS02065	COG0531	amino acid
DK885_RS02080	COG2116	formate transmembrane transporter activity
DK885_RS02085	COG2146	nitrite reductase [NAD(P)H] activity
DK885_RS02090	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DK885_RS02100	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DK885_RS02110	COG2184	nucleotidyltransferase activity
DK885_RS02115	COG0512	Glutamine amidotransferase of anthranilate synthase
DK885_RS02120	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DK885_RS02125	COG1289	transmembrane transporter activity
DK885_RS02130	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DK885_RS02140	COG1765	OsmC-like protein
DK885_RS02145	COG3954	Phosphoribulokinase
DK885_RS02155	COG0429	hydrolase of the alpha beta-hydrolase fold
DK885_RS02160	COG0488	(ABC) transporter
DK885_RS02180	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DK885_RS02185	COG1047	Peptidyl-prolyl cis-trans
DK885_RS02195	COG0545	Peptidyl-prolyl cis-trans isomerase
DK885_RS02200	COG2964	Protein conserved in bacteria
DK885_RS02245	COG3979	chitinase
DK885_RS02250	COG2906	2 iron, 2 sulfur cluster binding
DK885_RS02255	COG2193	ferroxidase activity
DK885_RS02260	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DK885_RS02265	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
DK885_RS02270	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
DK885_RS02275	COG3156	type II secretion system protein K
DK885_RS02280	COG4795	General secretion pathway protein
DK885_RS02285	COG2165	general secretion pathway protein
DK885_RS02290	COG2165	general secretion pathway protein
DK885_RS02295	COG2165	general secretion pathway protein
DK885_RS02300	COG1459	type II secretion system
DK885_RS02305	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DK885_RS02310	COG1450	Type ii and iii secretion system protein
DK885_RS02315	COG3031	protein transport across the cell outer membrane
DK885_RS02320	COG3267	Type II secretory pathway component ExeA
DK885_RS02320	COG3409	Peptidoglycan-binding domain 1 protein
DK885_RS02345	COG0089	rRNA binding
DK885_RS02435	COG0201	protein transport
DK885_RS02475	COG0789	Transcriptional regulator
DK885_RS02480	COG3036	rescue of stalled ribosome
DK885_RS02490	COG0569	domain protein
DK885_RS02510	COG0758	DNA mediated transformation
DK885_RS02520	COG0551	DNA topoisomerase type I activity
DK885_RS02545	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DK885_RS02585	COG1126	abc transporter atp-binding protein
DK885_RS02590	COG0765	amino acid transport
DK885_RS02595	COG4597	amino acid ABC transporter
DK885_RS02600	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS02620	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DK885_RS02625	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK885_RS02635	COG1309	transcriptional regulator
DK885_RS02645	COG2189	Belongs to the N(4) N(6)-methyltransferase family
DK885_RS02655	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DK885_RS02665	COG4145	pantothenate transmembrane transporter activity
DK885_RS02670	COG3924	membrane
DK885_RS02675	COG0439	Biotin carboxylase
DK885_RS02680	COG0511	ligase activity, forming carbon-carbon bonds
DK885_RS02690	COG0604	alcohol dehydrogenase
DK885_RS02695	COG2200	EAL domain
DK885_RS02695	COG2199	diguanylate cyclase activity
DK885_RS02710	COG1077	Cell shape determining protein MreB Mrl
DK885_RS02715	COG1792	Involved in formation and maintenance of cell shape
DK885_RS02720	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DK885_RS02725	COG0424	maF-like protein
DK885_RS02730	COG1530	ribonuclease E activity
DK885_RS02735	COG3164	Protein of unknown function
DK885_RS02740	COG0312	modulator of DNA gyrase
DK885_RS02745	COG0583	DNA-binding transcription factor activity
DK885_RS02765	COG2732	(Barnase) inhibitor
DK885_RS02785	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DK885_RS02790	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DK885_RS02795	COG3105	Protein conserved in bacteria
DK885_RS02800	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DK885_RS02820	COG0625	glutathione transferase activity
DK885_RS02825	COG2969	positive regulation of protein catabolic process
DK885_RS02830	COG3069	C4-dicarboxylate transmembrane transporter activity
DK885_RS02865	COG2731	YhcH YjgK YiaL family protein
DK885_RS02870	COG4804	nuclease activity
DK885_RS02875	COG3539	Fimbrial protein
DK885_RS02895	COG3188	usher protein
DK885_RS02900	COG3121	Chaperone
DK885_RS02905	COG3539	Fimbrial protein
DK885_RS02915	COG0493	'glutamate synthase
DK885_RS02920	COG0067	glutamate synthase
DK885_RS02920	COG0069	glutamate synthase activity
DK885_RS02920	COG0070	glutamate synthase
DK885_RS02935	COG1242	4 iron, 4 sulfur cluster binding
DK885_RS02940	COG0784	Response regulator, receiver
DK885_RS02940	COG5002	protein histidine kinase activity
DK885_RS02940	COG2198	Histidine kinase
DK885_RS02955	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DK885_RS02965	COG0515	serine threonine protein kinase
DK885_RS02970	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS02985	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DK885_RS02990	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DK885_RS02995	COG1137	ATPase activity
DK885_RS03000	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DK885_RS03005	COG3117	lipopolysaccharide transmembrane transporter activity
DK885_RS03010	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DK885_RS03015	COG0517	IMP dehydrogenase activity
DK885_RS03015	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DK885_RS03020	COG0530	calcium, potassium:sodium antiporter activity
DK885_RS03025	COG1127	ABC transporter
DK885_RS03030	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DK885_RS03035	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DK885_RS03040	COG2854	intermembrane phospholipid transfer
DK885_RS03045	COG3113	response to antibiotic
DK885_RS03050	COG5007	Belongs to the BolA IbaG family
DK885_RS03060	COG3423	Transcriptional regulator
DK885_RS03065	COG0142	geranyltranstransferase activity
DK885_RS03080	COG0697	spore germination
DK885_RS03090	COG2027	D-alanyl-D-alanine carboxypeptidase
DK885_RS03095	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DK885_RS03100	COG1534	Rna-binding protein
DK885_RS03110	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DK885_RS03115	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DK885_RS03125	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DK885_RS03135	COG2194	sulfuric ester hydrolase activity
DK885_RS03155	COG0195	Participates in both transcription termination and antitermination
DK885_RS03195	COG0513	Belongs to the DEAD box helicase family
DK885_RS03200	COG0814	amino acid
DK885_RS03205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DK885_RS03210	COG0826	peptidase U32
DK885_RS03215	COG0826	peptidase U32
DK885_RS03220	COG3154	lipid carrier protein
DK885_RS03225	COG3153	acetyltransferase
DK885_RS03240	COG0693	protein deglycase activity
DK885_RS03245	COG0702	epimerase
DK885_RS03250	COG0701	Predicted permease
DK885_RS03255	COG2823	Periplasmic or secreted lipoprotein
DK885_RS03270	COG3107	peptidoglycan biosynthetic process
DK885_RS03275	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DK885_RS03280	COG3539	Fimbrial protein
DK885_RS03285	COG3188	usher protein
DK885_RS03290	COG3121	Chaperone
DK885_RS03295	COG3539	Fimbrial protein
DK885_RS03300	COG0363	glucosamine-6-phosphate deaminase activity
DK885_RS03305	COG3716	PTS system mannose fructose sorbose family IID component
DK885_RS03310	COG3715	PTS system
DK885_RS03315	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS03325	COG2222	sugar isomerase
DK885_RS03340	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS03355	COG1349	DNA-binding transcription factor activity
DK885_RS03365	COG2002	toxin-antitoxin pair type II binding
DK885_RS03370	COG2721	sulfolactate sulfo-lyase activity
DK885_RS03375	COG2271	Major facilitator Superfamily
DK885_RS03385	COG2084	Dehydrogenase
DK885_RS03390	COG1929	Belongs to the glycerate kinase type-1 family
DK885_RS03415	COG0583	DNA-binding transcription factor activity
DK885_RS03425	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DK885_RS03435	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DK885_RS03440	COG1882	Formate acetyltransferase
DK885_RS03445	COG0251	oxidation-reduction process
DK885_RS03450	COG1760	l-serine dehydratase
DK885_RS03460	COG0814	amino acid
DK885_RS03475	COG1741	Belongs to the pirin family
DK885_RS03480	COG0583	DNA-binding transcription factor activity
DK885_RS03490	COG3152	Membrane
DK885_RS03495	COG3152	Membrane
DK885_RS03500	COG0435	Glutathione S-transferase
DK885_RS03505	COG2259	Doxx family
DK885_RS03515	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
DK885_RS03520	COG4575	ribosome binding
DK885_RS03525	COG1422	Protein of unknown function (DUF1090)
DK885_RS03535	COG0586	Pfam SNARE associated Golgi protein
DK885_RS03540	COG2186	Transcriptional regulator
DK885_RS03545	COG2271	Major facilitator Superfamily
DK885_RS03555	COG2721	sulfolactate sulfo-lyase activity
DK885_RS03565	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
DK885_RS03570	COG0861	Integral membrane protein TerC family
DK885_RS03575	COG0673	inositol 2-dehydrogenase activity
DK885_RS03580	COG2949	membrane
DK885_RS03585	COG1451	nucleotide metabolic process
DK885_RS03600	COG4680	protein conserved in bacteria
DK885_RS03605	COG5499	transcription regulator containing HTH domain
DK885_RS03610	COG1902	pentaerythritol trinitrate reductase activity
DK885_RS03610	COG0446	pyridine nucleotide-disulphide oxidoreductase
DK885_RS03615	COG3408	Glycogen debranching enzyme
DK885_RS03615	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
DK885_RS03625	COG0531	amino acid
DK885_RS03630	COG2731	YhcH YjgK YiaL family protein
DK885_RS03635	COG3250	beta-galactosidase activity
DK885_RS03640	COG1609	Transcriptional regulator
DK885_RS03650	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DK885_RS03665	COG0840	transmembrane signaling receptor activity
DK885_RS03670	COG1695	Transcriptional regulator
DK885_RS03675	COG2375	cellular response to nickel ion
DK885_RS03690	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DK885_RS03700	COG0358	DNA primase activity
DK885_RS03705	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DK885_RS03720	COG0471	metal ion transport
DK885_RS03730	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DK885_RS03740	COG0583	DNA-binding transcription factor activity
DK885_RS03750	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DK885_RS03765	COG4991	sh3 domain protein
DK885_RS03775	COG3025	triphosphatase activity
DK885_RS03805	COG2268	Band 7 protein
DK885_RS03810	COG1585	Membrane protein implicated in regulation of membrane protease activity
DK885_RS03820	COG3539	Fimbrial protein
DK885_RS03825	COG3121	Chaperone
DK885_RS03830	COG3188	usher protein
DK885_RS03850	COG3539	Fimbrial protein
DK885_RS03855	COG2960	long-chain fatty acid transporting porin activity
DK885_RS03875	COG3384	dioxygenase
DK885_RS03880	COG0754	glutathionylspermidine amidase activity
DK885_RS03895	COG1538	Outer membrane efflux protein
DK885_RS03900	COG0494	nUDIX hydrolase
DK885_RS03905	COG3151	Protein conserved in bacteria
DK885_RS03910	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DK885_RS03915	COG3150	esterase
DK885_RS03920	COG0187	DNA topoisomerase II activity
DK885_RS03925	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DK885_RS03930	COG2249	NAD(P)H dehydrogenase (quinone) activity
DK885_RS03945	COG0642	Histidine kinase
DK885_RS03950	COG0745	RESPONSE REGULATOR receiver
DK885_RS03955	COG3111	PFAM Bacterial OB fold (BOF) protein
DK885_RS03960	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
DK885_RS03970	COG2944	sequence-specific DNA binding
DK885_RS03980	COG4166	transmembrane transport
DK885_RS03985	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DK885_RS03990	COG0204	Acyl-transferase
DK885_RS03995	COG2132	Multicopper oxidase
DK885_RS04000	COG1032	radical SAM domain protein
DK885_RS04005	COG4238	major outer membrane lipoprotein
DK885_RS04015	COG0656	L-ascorbic acid biosynthetic process
DK885_RS04020	COG1979	alcohol dehydrogenase
DK885_RS04025	COG2207	Transcriptional regulator
DK885_RS04030	COG0586	Pfam SNARE associated Golgi protein
DK885_RS04035	COG0626	cystathionine gamma-synthase activity
DK885_RS04045	COG0811	peptide transport
DK885_RS04050	COG0848	biopolymer transport protein
DK885_RS04055	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS04065	COG0667	Aldo Keto reductase
DK885_RS04090	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
DK885_RS04095	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS04100	COG5557	Pfam Polysulphide reductase, NrfD
DK885_RS04105	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
DK885_RS04110	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DK885_RS04115	COG1773	rubredoxin
DK885_RS04125	COG0298	carbon dioxide binding
DK885_RS04130	COG0625	glutathione transferase activity
DK885_RS04135	COG0754	glutathionylspermidine amidase activity
DK885_RS04140	COG0306	phosphate transporter
DK885_RS04145	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DK885_RS04150	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DK885_RS04155	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DK885_RS04160	COG2244	polysaccharide biosynthetic process
DK885_RS04170	COG0456	acetyltransferase
DK885_RS04175	COG2186	Transcriptional regulator
DK885_RS04180	COG0277	FAD linked oxidase domain protein
DK885_RS04185	COG0277	FAD linked oxidase domain protein
DK885_RS04190	COG0247	lactate metabolic process
DK885_RS04195	COG3193	protein, possibly involved in utilization of glycolate and propanediol
DK885_RS04200	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DK885_RS04205	COG1620	l-lactate permease
DK885_RS04215	COG3064	Membrane
DK885_RS04220	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DK885_RS04230	COG3031	protein transport across the cell outer membrane
DK885_RS04240	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
DK885_RS04250	COG1811	Na channel or pump
DK885_RS04260	COG1982	Orn Lys Arg decarboxylase major
DK885_RS04265	COG2211	Major facilitator Superfamily
DK885_RS04280	COG1194	a g-specific adenine glycosylase
DK885_RS04295	COG3171	Protein conserved in bacteria
DK885_RS04305	COG0252	asparaginase activity
DK885_RS04315	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DK885_RS04320	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DK885_RS04330	COG0762	integral membrane protein
DK885_RS04335	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DK885_RS04340	COG2805	Type II/IV secretion system protein
DK885_RS04355	COG0189	ligase activity
DK885_RS04360	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DK885_RS04365	COG2356	endonuclease I
DK885_RS04375	COG2814	Major facilitator Superfamily
DK885_RS04400	COG1166	arginine decarboxylase activity
DK885_RS04410	COG0501	Belongs to the peptidase M48B family
DK885_RS04415	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DK885_RS04420	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS04425	COG2213	PTS system mannitol-specific
DK885_RS04430	COG1063	alcohol dehydrogenase
DK885_RS04435	COG1494	fructose-1,6-bisphosphatase
DK885_RS04440	COG3722	fumarate hydratase activity
DK885_RS04445	COG1072	(Pantothenic acid kinase))
DK885_RS04465	COG0191	fructose-bisphosphate aldolase activity
DK885_RS04475	COG0668	transmembrane transport
DK885_RS04480	COG1279	arginine transmembrane transporter activity
DK885_RS04485	COG2968	Membrane
DK885_RS04490	COG0583	DNA-binding transcription factor activity
DK885_RS04495	COG0427	acetyl-CoA hydrolase
DK885_RS04500	COG1024	Enoyl-CoA hydratase
DK885_RS04505	COG1703	isobutyryl-CoA mutase activity
DK885_RS04510	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DK885_RS04510	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DK885_RS04530	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DK885_RS04540	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DK885_RS04565	COG0006	proline dipeptidase activity
DK885_RS04570	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DK885_RS04575	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DK885_RS04595	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS04600	COG2723	6-phospho-beta-galactosidase activity
DK885_RS04610	COG1272	protein, Hemolysin III
DK885_RS04620	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
DK885_RS04630	COG0716	FMN binding
DK885_RS04635	COG4974	Belongs to the 'phage' integrase family
DK885_RS04640	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DK885_RS04645	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DK885_RS04655	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DK885_RS04670	COG2233	PERMEase
DK885_RS04680	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS04680	COG0493	'glutamate synthase
DK885_RS04685	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS04690	COG2252	PERMEase
DK885_RS04695	COG0402	S-adenosylhomocysteine deaminase activity
DK885_RS04700	COG2233	PERMEase
DK885_RS04705	COG2080	2 iron, 2 sulfur cluster binding
DK885_RS04705	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DK885_RS04710	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DK885_RS04715	COG0402	S-adenosylhomocysteine deaminase activity
DK885_RS04720	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS04720	COG0493	'glutamate synthase
DK885_RS04725	COG2068	MobA-Related Protein
DK885_RS04730	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DK885_RS04735	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
DK885_RS04735	COG3608	succinylglutamate desuccinylase aspartoacylase
DK885_RS04740	COG0549	Belongs to the carbamate kinase family
DK885_RS04750	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DK885_RS04755	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DK885_RS04760	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DK885_RS04765	COG3829	transcription factor binding
DK885_RS04770	COG2080	2 iron, 2 sulfur cluster binding
DK885_RS04775	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DK885_RS04780	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DK885_RS04790	COG4942	peptidase
DK885_RS04800	COG3387	PFAM Glycoside hydrolase 15-related
DK885_RS04830	COG2197	response regulator
DK885_RS04835	COG2197	response regulator
DK885_RS04850	COG3710	Transcriptional regulator
DK885_RS04850	COG0457	Tetratricopeptide repeat
DK885_RS04855	COG0457	Tetratricopeptide repeat
DK885_RS04880	COG3710	Transcriptional regulator
DK885_RS04885	COG2771	luxR family
DK885_RS04890	COG0814	amino acid
DK885_RS04895	COG0183	Belongs to the thiolase family
DK885_RS04905	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS04910	COG2814	Major facilitator Superfamily
DK885_RS04915	COG1794	racemase activity, acting on amino acids and derivatives
DK885_RS04920	COG0583	DNA-binding transcription factor activity
DK885_RS04930	COG1609	Transcriptional regulator
DK885_RS04945	COG0667	Aldo Keto reductase
DK885_RS04955	COG0861	Integral membrane protein TerC family
DK885_RS04970	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
DK885_RS04985	COG2165	general secretion pathway protein
DK885_RS04990	COG4795	General secretion pathway protein
DK885_RS05000	COG4967	type IV pilus modification protein PilV
DK885_RS05005	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DK885_RS05010	COG1025	Belongs to the peptidase M16 family
DK885_RS05015	COG1074	ATP-dependent DNA helicase activity
DK885_RS05020	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DK885_RS05025	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DK885_RS05025	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DK885_RS05035	COG0860	N-Acetylmuramoyl-L-alanine amidase
DK885_RS05060	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DK885_RS05065	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DK885_RS05070	COG2166	iron-sulfur cluster assembly
DK885_RS05075	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DK885_RS05085	COG0583	DNA-binding transcription factor activity
DK885_RS05090	COG2363	Small membrane protein
DK885_RS05100	COG1349	DNA-binding transcription factor activity
DK885_RS05110	COG1070	Carbohydrate kinase
DK885_RS05120	COG0738	Major facilitator superfamily
DK885_RS05125	COG0235	Class ii aldolase
DK885_RS05130	COG1454	alcohol dehydrogenase
DK885_RS05140	COG1760	l-serine dehydratase
DK885_RS05145	COG0814	amino acid
DK885_RS05150	COG1611	Belongs to the LOG family
DK885_RS05165	COG3098	single-species biofilm formation
DK885_RS05170	COG0564	pseudouridine synthase activity
DK885_RS05175	COG0716	FMN binding
DK885_RS05180	COG2271	Major facilitator Superfamily
DK885_RS05185	COG4948	Mandelate Racemase Muconate Lactonizing
DK885_RS05190	COG4948	Mandelate Racemase Muconate Lactonizing
DK885_RS05195	COG2205	protein histidine kinase activity
DK885_RS05195	COG3437	response regulator, receiver
DK885_RS05195	COG3850	Histidine kinase
DK885_RS05195	COG4999	Histidine kinase
DK885_RS05200	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DK885_RS05205	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DK885_RS05210	COG2336	PFAM SpoVT AbrB
DK885_RS05215	COG2337	Toxic component of a toxin-antitoxin (TA) module
DK885_RS05220	COG3956	TIGRFAM MazG family protein
DK885_RS05235	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DK885_RS05245	COG0602	queuosine metabolic process
DK885_RS05250	COG1070	Carbohydrate kinase
DK885_RS05255	COG2223	nitrite transmembrane transporter activity
DK885_RS05260	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS05265	COG0277	FAD linked oxidase domain protein
DK885_RS05270	COG0477	Major facilitator Superfamily
DK885_RS05275	COG2086	electron transfer activity
DK885_RS05280	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DK885_RS05285	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DK885_RS05290	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
DK885_RS05295	COG0644	oxidoreductase
DK885_RS05300	COG0720	synthase
DK885_RS05305	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DK885_RS05325	COG1203	CRISPR-associated helicase, Cas3
DK885_RS05340	COG1857	crispr-associated protein
DK885_RS05355	COG1518	maintenance of DNA repeat elements
DK885_RS05360	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DK885_RS05365	COG2234	aminopeptidase activity
DK885_RS05420	COG1388	LysM domain
DK885_RS05420	COG4942	peptidase
DK885_RS05425	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DK885_RS05430	COG2610	gluconate transmembrane transporter activity
DK885_RS05435	COG3622	Belongs to the hyi family
DK885_RS05440	COG0235	Class ii aldolase
DK885_RS05445	COG3395	kinase activity
DK885_RS05450	COG2084	Dehydrogenase
DK885_RS05455	COG1349	DNA-binding transcription factor activity
DK885_RS05460	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DK885_RS05475	COG3604	Transcriptional regulator
DK885_RS05480	COG0309	Hydrogenase expression formation protein (HypE)
DK885_RS05485	COG0409	Hydrogenase expression formation protein
DK885_RS05490	COG0298	carbon dioxide binding
DK885_RS05495	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DK885_RS05500	COG0375	protein maturation
DK885_RS05510	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS05515	COG0651	ATP synthesis coupled electron transport
DK885_RS05520	COG0650	Formate hydrogenlyase subunit 4
DK885_RS05525	COG3261	NADH dehydrogenase
DK885_RS05525	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
DK885_RS05530	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DK885_RS05535	COG3260	NADH ubiquinone oxidoreductase 20
DK885_RS05545	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DK885_RS05550	COG2723	6-phospho-beta-galactosidase activity
DK885_RS05555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS05555	COG1263	PTS System
DK885_RS05560	COG1609	Transcriptional regulator
DK885_RS05565	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS05570	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DK885_RS05590	COG0517	IMP dehydrogenase activity
DK885_RS05590	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DK885_RS05595	COG1349	DNA-binding transcription factor activity
DK885_RS05600	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS05605	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS05610	COG3731	PTS system glucitol sorbitol-specific IIA component
DK885_RS05615	COG3732	PTS system glucitol sorbitol-specific
DK885_RS05620	COG3730	PTS system glucitol sorbitol-specific
DK885_RS05625	COG2951	lytic endotransglycosylase activity
DK885_RS05630	COG1546	Belongs to the CinA family
DK885_RS05650	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DK885_RS05680	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DK885_RS05685	COG1238	metal cluster binding
DK885_RS05700	COG2814	Major facilitator Superfamily
DK885_RS05705	COG1566	PFAM secretion protein HlyD family protein
DK885_RS05710	COG1846	Transcriptional regulator
DK885_RS05720	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DK885_RS05730	COG2113	Glycine betaine
DK885_RS05735	COG4176	ABC-type proline glycine betaine transport system permease component
DK885_RS05740	COG4175	Glycine betaine
DK885_RS05750	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DK885_RS05755	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DK885_RS05765	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DK885_RS05770	COG4575	ribosome binding
DK885_RS05785	COG2916	Histone family protein nucleoid-structuring protein H-NS
DK885_RS05790	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DK885_RS05795	COG0640	Transcriptional regulator
DK885_RS05800	COG0401	homolog of Blt101
DK885_RS05805	COG1652	LysM domain
DK885_RS05810	COG1802	Transcriptional regulator
DK885_RS05815	COG1113	amino acid transport
DK885_RS05820	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DK885_RS05825	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS05830	COG0579	oxidoreductase
DK885_RS05875	COG3468	outer membrane autotransporter barrel domain protein
DK885_RS05895	COG2003	Belongs to the UPF0758 family
DK885_RS05940	COG2378	regulation of single-species biofilm formation
DK885_RS05950	COG3596	GTP binding
DK885_RS05965	COG1479	Protein of unknown function DUF262
DK885_RS05975	COG1204	response to ionizing radiation
DK885_RS05985	COG4983	Phage plasmid primase, P4 family domain protein
DK885_RS05990	COG3311	Transcriptional regulator
DK885_RS06000	COG0582	viral genome integration into host DNA
DK885_RS06015	COG2867	negative regulation of translational initiation
DK885_RS06025	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DK885_RS06030	COG0497	DNA recombination
DK885_RS06050	COG4536	flavin adenine dinucleotide binding
DK885_RS06055	COG4137	Cytochrome C assembly protein
DK885_RS06060	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DK885_RS06085	COG2885	chlorophyll binding
DK885_RS06090	COG2199	diguanylate cyclase activity
DK885_RS06105	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DK885_RS06110	COG1605	Chorismate mutase
DK885_RS06110	COG0287	Prephenate dehydrogenase
DK885_RS06115	COG1605	Chorismate mutase
DK885_RS06115	COG0077	Prephenate dehydratase
DK885_RS06125	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DK885_RS06135	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DK885_RS06140	COG0564	pseudouridine synthase activity
DK885_RS06145	COG1496	oxidoreductase activity
DK885_RS06150	COG0542	response to heat
DK885_RS06180	COG0477	Major facilitator Superfamily
DK885_RS06185	COG5544	Lipoprotein
DK885_RS06190	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DK885_RS06195	COG0045	succinate-CoA ligase (ADP-forming) activity
DK885_RS06195	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DK885_RS06195	COG1042	CoA-binding domain protein
DK885_RS06200	COG3148	PFAM DTW domain containing protein
DK885_RS06205	COG3118	belongs to the thioredoxin family
DK885_RS06215	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DK885_RS06235	COG0583	DNA-binding transcription factor activity
DK885_RS06240	COG0513	Belongs to the DEAD box helicase family
DK885_RS06250	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DK885_RS06255	COG1595	DNA-templated transcription, initiation
DK885_RS06260	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
DK885_RS06265	COG3026	antisigma factor binding
DK885_RS06270	COG3086	response to oxidative stress
DK885_RS06280	COG0681	Belongs to the peptidase S26 family
DK885_RS06305	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DK885_RS06330	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS06335	COG1737	Transcriptional regulator
DK885_RS06340	COG0560	Phosphoserine phosphatase
DK885_RS06360	COG0047	phosphoribosylformylglycinamidine synthase activity
DK885_RS06360	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DK885_RS06365	COG2205	protein histidine kinase activity
DK885_RS06370	COG3170	Tfp pilus assembly protein FimV
DK885_RS06375	COG2204	response regulator
DK885_RS06380	COG0347	Belongs to the P(II) protein family
DK885_RS06385	COG1017	nitric oxide dioxygenase activity
DK885_RS06385	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DK885_RS06395	COG1940	carbohydrate kinase activity
DK885_RS06400	COG0457	Tetratricopeptide repeat
DK885_RS06405	COG1879	ABC-type sugar transport system periplasmic component
DK885_RS06410	COG1129	ABC transporter
DK885_RS06415	COG1172	Belongs to the binding-protein-dependent transport system permease family
DK885_RS06420	COG1063	alcohol dehydrogenase
DK885_RS06425	COG2017	converts alpha-aldose to the beta-anomer
DK885_RS06430	COG2259	Doxx family
DK885_RS06455	COG4638	Rieske (2fe-2S)
DK885_RS06460	COG0583	DNA-binding transcription factor activity
DK885_RS06465	COG2814	Major facilitator Superfamily
DK885_RS06470	COG3711	transcriptional antiterminator
DK885_RS06475	COG1073	alpha beta
DK885_RS06480	COG0483	inositol monophosphate 1-phosphatase activity
DK885_RS06500	COG0822	iron-sulfur transferase activity
DK885_RS06520	COG0633	Ferredoxin
DK885_RS06525	COG2975	iron-sulfur cluster assembly
DK885_RS06540	COG2897	thiosulfate sulfurtransferase activity
DK885_RS06545	COG2373	Large extracellular alpha-helical protein
DK885_RS06550	COG4953	penicillin-binding protein 1C
DK885_RS06585	COG2976	Protein conserved in bacteria
DK885_RS06590	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DK885_RS06600	COG1645	bacterial-type flagellum-dependent swarming motility
DK885_RS06610	COG0517	IMP dehydrogenase activity
DK885_RS06610	COG0516	GMP reductase activity
DK885_RS06625	COG3133	Outer membrane lipoprotein
DK885_RS06645	COG2200	EAL domain
DK885_RS06650	COG0248	Ppx GppA phosphatase
DK885_RS06655	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DK885_RS06660	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DK885_RS06680	COG2233	PERMEase
DK885_RS06690	COG1393	Belongs to the ArsC family
DK885_RS06695	COG4783	chaperone-mediated protein folding
DK885_RS06700	COG0628	permease
DK885_RS06710	COG2116	formate transmembrane transporter activity
DK885_RS06715	COG3604	Transcriptional regulator
DK885_RS06725	COG3260	NADH ubiquinone oxidoreductase 20
DK885_RS06730	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DK885_RS06735	COG3261	NADH dehydrogenase
DK885_RS06735	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
DK885_RS06740	COG0651	ATP synthesis coupled electron transport
DK885_RS06745	COG4237	Hydrogenase 4 membrane
DK885_RS06750	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DK885_RS06755	COG0650	Formate hydrogenlyase subunit 4
DK885_RS06760	COG0651	ATP synthesis coupled electron transport
DK885_RS06765	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS06770	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DK885_RS06775	COG2716	regulation of RNA biosynthetic process
DK885_RS06785	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DK885_RS06795	COG2321	neutral zinc metallopeptidase
DK885_RS06800	COG1444	tRNA N-acetyltransferase activity
DK885_RS06805	COG0400	carboxylic ester hydrolase activity
DK885_RS06820	COG1393	Belongs to the ArsC family
DK885_RS06830	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DK885_RS06835	COG3850	Histidine kinase
DK885_RS06840	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS06840	COG0493	'glutamate synthase
DK885_RS06850	COG5342	invasion associated locus B
DK885_RS06855	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DK885_RS06860	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DK885_RS06865	COG0280	phosphate acetyltransferase
DK885_RS06865	COG0281	malic enzyme
DK885_RS06870	COG4810	utilization protein
DK885_RS06875	COG4917	ethanolamine utilization protein
DK885_RS06880	COG4766	ethanolamine catabolic process
DK885_RS06885	COG4812	Cobalamin adenosyltransferase
DK885_RS06890	COG0280	phosphate acetyltransferase
DK885_RS06895	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
DK885_RS06900	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
DK885_RS06905	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS06910	COG4820	ethanolamine utilization protein (EutJ)
DK885_RS06915	COG1454	alcohol dehydrogenase
DK885_RS06920	COG3192	ethanolamine utilization protein
DK885_RS06925	COG4819	ethanolamine utilization protein
DK885_RS06930	COG4303	Ethanolamine ammonia lyase large subunit
DK885_RS06940	COG4816	utilization protein
DK885_RS06945	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
DK885_RS06960	COG0860	N-Acetylmuramoyl-L-alanine amidase
DK885_RS06965	COG0456	acetyltransferase
DK885_RS06980	COG2837	iron assimilation
DK885_RS06985	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DK885_RS06990	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS06990	COG1263	PTS System
DK885_RS07005	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS07015	COG4150	thiosulfate binding
DK885_RS07020	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DK885_RS07025	COG4208	sulfate ABC transporter
DK885_RS07030	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DK885_RS07035	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DK885_RS07040	COG4884	unkown
DK885_RS07040	COG3831	ATPase activity
DK885_RS07055	COG2190	(PTS) system
DK885_RS07060	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DK885_RS07065	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS07070	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DK885_RS07090	COG3530	Putative quorum-sensing-regulated virulence factor
DK885_RS07095	COG0385	Bile acid
DK885_RS07100	COG0583	DNA-binding transcription factor activity
DK885_RS07110	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DK885_RS07115	COG2211	Major facilitator Superfamily
DK885_RS07125	COG0583	DNA-binding transcription factor activity
DK885_RS07160	COG3415	Transposase
DK885_RS07165	COG3415	Transposase
DK885_RS07180	COG2199	diguanylate cyclase activity
DK885_RS07180	COG2200	EAL domain
DK885_RS07185	COG3385	transposase activity
DK885_RS07190	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DK885_RS07215	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS07220	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS07225	COG0006	proline dipeptidase activity
DK885_RS07230	COG1363	Peptidase, m42
DK885_RS07235	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS07235	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS07235	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DK885_RS07240	COG2207	Transcriptional regulator
DK885_RS07245	COG3279	Response regulator of the LytR AlgR family
DK885_RS07250	COG3275	phosphorelay sensor kinase activity
DK885_RS07255	COG0436	Aminotransferase
DK885_RS07265	COG1560	Kdo2-lipid A biosynthetic process
DK885_RS07295	COG0028	Belongs to the TPP enzyme family
DK885_RS07300	COG0679	Auxin Efflux Carrier
DK885_RS07305	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DK885_RS07310	COG2205	protein histidine kinase activity
DK885_RS07310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS07310	COG2198	Histidine kinase
DK885_RS07310	COG0784	Response regulator, receiver
DK885_RS07315	COG2197	response regulator
DK885_RS07320	COG1566	PFAM secretion protein HlyD family protein
DK885_RS07325	COG0477	Major facilitator Superfamily
DK885_RS07335	COG2610	gluconate transmembrane transporter activity
DK885_RS07340	COG0583	DNA-binding transcription factor activity
DK885_RS07360	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
DK885_RS07365	COG5532	Uncharacterized conserved protein (DUF2303)
DK885_RS07385	COG4725	Belongs to the MT-A70-like family
DK885_RS07420	COG2246	polysaccharide biosynthetic process
DK885_RS07425	COG0582	viral genome integration into host DNA
DK885_RS07435	COG2116	formate transmembrane transporter activity
DK885_RS07445	COG2853	Lipoprotein
DK885_RS07460	COG2067	long-chain fatty acid transport protein
DK885_RS07470	COG3691	Protein conserved in bacteria
DK885_RS07485	COG2062	phosphohistidine phosphatase, SixA
DK885_RS07490	COG3539	Fimbrial protein
DK885_RS07500	COG3121	Chaperone
DK885_RS07505	COG3539	Fimbrial protein
DK885_RS07510	COG3539	Fimbrial protein
DK885_RS07515	COG3539	Fimbrial protein
DK885_RS07530	COG2890	protein-(glutamine-N5) methyltransferase activity
DK885_RS07545	COG0730	response to heat
DK885_RS07550	COG3101	peptidyl-lysine hydroxylation
DK885_RS07565	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DK885_RS07575	COG2814	Major facilitator Superfamily
DK885_RS07590	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DK885_RS07600	COG0586	Pfam SNARE associated Golgi protein
DK885_RS07610	COG0285	dihydrofolate synthase activity
DK885_RS07615	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
DK885_RS07620	COG1286	toxin biosynthetic process
DK885_RS07625	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DK885_RS07630	COG0163	prenyltransferase activity
DK885_RS07635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS07640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS07645	COG4215	(ABC) transporter
DK885_RS07650	COG4160	amino acid transport
DK885_RS07655	COG4598	ABC transporter
DK885_RS07660	COG5464	transposase or invertase
DK885_RS07665	COG1090	epimerase
DK885_RS07670	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DK885_RS07675	COG0625	glutathione transferase activity
DK885_RS07680	COG0625	glutathione transferase activity
DK885_RS07685	COG0622	Phosphoesterase
DK885_RS07690	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DK885_RS07695	COG1288	antiporter activity
DK885_RS07700	COG0857	belongs to the CobB CobQ family
DK885_RS07700	COG0280	phosphate acetyltransferase
DK885_RS07705	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DK885_RS07720	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DK885_RS07725	COG0490	domain, Protein
DK885_RS07725	COG0471	metal ion transport
DK885_RS07735	COG0436	Aminotransferase
DK885_RS07765	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
DK885_RS07770	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
DK885_RS07775	COG1034	ATP synthesis coupled electron transport
DK885_RS07790	COG0839	Belongs to the complex I subunit 6 family
DK885_RS07800	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DK885_RS07805	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DK885_RS07815	COG0457	Tetratricopeptide repeat
DK885_RS07835	COG2234	aminopeptidase activity
DK885_RS07840	COG2304	oxidoreductase activity
DK885_RS07845	COG5160	protein modification by small protein removal
DK885_RS07855	COG2153	protein acetylation
DK885_RS07860	COG4575	ribosome binding
DK885_RS07865	COG1169	isochorismate synthase
DK885_RS07880	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DK885_RS07890	COG0318	PFAM AMP-dependent synthetase and ligase
DK885_RS07955	COG1414	Transcriptional regulator
DK885_RS07965	COG2271	Major facilitator Superfamily
DK885_RS07980	COG5464	transposase or invertase
DK885_RS07985	COG0247	lactate metabolic process
DK885_RS07995	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DK885_RS08000	COG2271	Major facilitator Superfamily
DK885_RS08005	COG0584	glycerophosphoryl diester phosphodiesterase
DK885_RS08010	COG0583	DNA-binding transcription factor activity
DK885_RS08015	COG3642	lipopolysaccharide core region biosynthetic process
DK885_RS08020	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DK885_RS08025	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DK885_RS08030	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DK885_RS08040	COG3468	outer membrane autotransporter barrel domain protein
DK885_RS08050	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DK885_RS08055	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
DK885_RS08060	COG3234	Protein of unknown function (DUF1175)
DK885_RS08070	COG2373	Large extracellular alpha-helical protein
DK885_RS08075	COG5445	Predicted secreted protein (DUF2300)
DK885_RS08080	COG4676	Protein conserved in bacteria
DK885_RS08085	COG0183	Belongs to the thiolase family
DK885_RS08090	COG2031	fatty acid transporter
DK885_RS08095	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DK885_RS08100	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DK885_RS08105	COG2204	response regulator
DK885_RS08110	COG3852	Histidine kinase
DK885_RS08115	COG2205	protein histidine kinase activity
DK885_RS08115	COG0784	Response regulator, receiver
DK885_RS08120	COG2197	response regulator
DK885_RS08125	COG0642	Histidine kinase
DK885_RS08125	COG2198	Histidine kinase
DK885_RS08140	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DK885_RS08145	COG1477	protein flavinylation
DK885_RS08150	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DK885_RS08150	COG2169	Transcriptional regulator
DK885_RS08155	COG3145	DNA-N1-methyladenine dioxygenase activity
DK885_RS08160	COG4615	Cyclic peptide transporter
DK885_RS08180	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS08180	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
DK885_RS08185	COG3062	negative regulation of establishment of protein localization
DK885_RS08195	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS08200	COG0348	domain, Protein
DK885_RS08205	COG3043	anaerobic respiration
DK885_RS08210	COG3005	denitrification pathway
DK885_RS08215	COG4133	protoheme IX ABC transporter activity
DK885_RS08220	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DK885_RS08225	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DK885_RS08230	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DK885_RS08240	COG1138	Cytochrome C-type biogenesis protein
DK885_RS08245	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DK885_RS08250	COG4235	cytochrome complex assembly
DK885_RS08250	COG3088	subunit of a heme lyase
DK885_RS08255	COG2197	response regulator
DK885_RS08280	COG3468	outer membrane autotransporter barrel domain protein
DK885_RS08295	COG3083	sulfuric ester hydrolase activity
DK885_RS08315	COG1061	Type III restriction enzyme res subunit
DK885_RS08325	COG1187	pseudouridine synthase activity
DK885_RS08330	COG2814	Major facilitator Superfamily
DK885_RS08345	COG4172	Belongs to the ABC transporter superfamily
DK885_RS08350	COG4239	(ABC) transporter, permease
DK885_RS08355	COG4174	ABC transporter (Permease)
DK885_RS08360	COG4166	transmembrane transport
DK885_RS08365	COG2200	EAL domain
DK885_RS08370	COG0791	NLP P60 protein
DK885_RS08375	COG0671	phosphoesterase, PA-phosphatase related
DK885_RS08380	COG0523	cobalamin synthesis protein
DK885_RS08385	COG0246	Mannitol dehydrogenase
DK885_RS08400	COG2814	Major facilitator Superfamily
DK885_RS08405	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS08405	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS08410	COG1105	Belongs to the carbohydrate kinase PfkB family
DK885_RS08415	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS08415	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS08415	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DK885_RS08420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS08425	COG2313	pseudouridylate synthase activity
DK885_RS08430	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DK885_RS08435	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DK885_RS08445	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DK885_RS08450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS08450	COG1522	sequence-specific DNA binding
DK885_RS08460	COG2855	membrane
DK885_RS08465	COG0583	DNA-binding transcription factor activity
DK885_RS08475	COG0833	amino acid
DK885_RS08485	COG4771	TonB-dependent receptor
DK885_RS08510	COG2311	Membrane
DK885_RS08520	COG1609	Transcriptional regulator
DK885_RS08525	COG1879	ABC-type sugar transport system periplasmic component
DK885_RS08530	COG1129	ABC transporter
DK885_RS08535	COG4211	Belongs to the binding-protein-dependent transport system permease family
DK885_RS08540	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DK885_RS08540	COG0167	dihydroorotate dehydrogenase activity
DK885_RS08545	COG0493	'glutamate synthase
DK885_RS08555	COG2949	membrane
DK885_RS08565	COG1346	cytolysis
DK885_RS08575	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DK885_RS08600	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS08605	COG0586	Pfam SNARE associated Golgi protein
DK885_RS08615	COG1686	Belongs to the peptidase S11 family
DK885_RS08620	COG0277	FAD linked oxidase domain protein
DK885_RS08625	COG1472	Belongs to the glycosyl hydrolase 3 family
DK885_RS08630	COG1732	Glycine betaine
DK885_RS08635	COG1174	glycine betaine transport
DK885_RS08640	COG1125	glycine betaine transport
DK885_RS08645	COG1174	glycine betaine transport
DK885_RS08655	COG0789	Transcriptional regulator
DK885_RS08660	COG3275	phosphorelay sensor kinase activity
DK885_RS08665	COG3279	Response regulator of the LytR AlgR family
DK885_RS08670	COG4807	Protein conserved in bacteria
DK885_RS08675	COG4808	Protein conserved in bacteria
DK885_RS08680	COG4715	Zinc finger, swim domain protein
DK885_RS08685	COG3552	Protein containing von Willebrand factor type A (VWA) domain
DK885_RS08690	COG2425	protein containing a von Willebrand factor type A (vWA) domain
DK885_RS08695	COG0714	Associated with various cellular activities
DK885_RS08705	COG3831	ATPase activity
DK885_RS08730	COG0489	protein tyrosine kinase activity
DK885_RS08745	COG3539	Fimbrial protein
DK885_RS08750	COG3121	Chaperone
DK885_RS08755	COG3188	usher protein
DK885_RS08760	COG3539	Fimbrial protein
DK885_RS08765	COG5455	response to cobalt ion
DK885_RS08770	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
DK885_RS08785	COG0351	phosphomethylpyrimidine kinase
DK885_RS08790	COG3757	hydrolase, family 25
DK885_RS08795	COG2188	Transcriptional regulator
DK885_RS08800	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS08805	COG1397	ADP-ribosylglycohydrolase
DK885_RS08810	COG2211	Major facilitator Superfamily
DK885_RS08815	COG1830	Aldolase
DK885_RS08845	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS08850	COG3414	Phosphotransferase system galactitol-specific IIB component
DK885_RS08855	COG3775	system Galactitol-specific IIC component
DK885_RS08860	COG1063	alcohol dehydrogenase
DK885_RS08905	COG0826	peptidase U32
DK885_RS08910	COG3422	double-strand break repair
DK885_RS08915	COG0745	RESPONSE REGULATOR receiver
DK885_RS08920	COG2205	protein histidine kinase activity
DK885_RS08955	COG4245	von Willebrand factor, type A
DK885_RS08960	COG0631	protein serine/threonine phosphatase activity
DK885_RS08965	COG3779	Protein conserved in bacteria
DK885_RS08970	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
DK885_RS08975	COG0443	Heat shock 70 kDa protein
DK885_RS08985	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DK885_RS08990	COG5002	protein histidine kinase activity
DK885_RS08990	COG5001	Diguanylate cyclase
DK885_RS08990	COG3447	MASE1 domain protein
DK885_RS08995	COG0572	uridine kinase
DK885_RS09005	COG2982	Protein involved in outer membrane biogenesis
DK885_RS09010	COG1253	flavin adenine dinucleotide binding
DK885_RS09015	COG1596	polysaccharide export
DK885_RS09020	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DK885_RS09025	COG0489	protein tyrosine kinase activity
DK885_RS09025	COG3206	protein involved in exopolysaccharide biosynthesis
DK885_RS09030	COG0463	Glycosyl transferase, family 2
DK885_RS09035	COG1045	serine acetyltransferase
DK885_RS09040	COG0438	transferase activity, transferring glycosyl groups
DK885_RS09050	COG1216	Glycosyl transferase, family 2
DK885_RS09055	COG0110	maltose O-acetyltransferase activity
DK885_RS09060	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
DK885_RS09065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DK885_RS09070	COG1051	belongs to the nudix hydrolase family
DK885_RS09075	COG0297	glycogen (starch) synthase activity
DK885_RS09080	COG0662	Cupin 2, conserved barrel domain protein
DK885_RS09080	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
DK885_RS09085	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DK885_RS09090	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DK885_RS09095	COG2244	polysaccharide biosynthetic process
DK885_RS09100	COG2327	Polysaccharide pyruvyl transferase
DK885_RS09105	COG0438	transferase activity, transferring glycosyl groups
DK885_RS09115	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DK885_RS09125	COG1088	dTDP-glucose 4,6-dehydratase activity
DK885_RS09135	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DK885_RS09140	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
DK885_RS09145	COG2244	polysaccharide biosynthetic process
DK885_RS09150	COG0562	UDP-galactopyranose mutase
DK885_RS09160	COG0438	transferase activity, transferring glycosyl groups
DK885_RS09165	COG0110	maltose O-acetyltransferase activity
DK885_RS09170	COG0438	transferase activity, transferring glycosyl groups
DK885_RS09195	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DK885_RS09200	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DK885_RS09205	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DK885_RS09210	COG0140	phosphoribosyl-ATP diphosphatase activity
DK885_RS09210	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DK885_RS09225	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DK885_RS09230	COG0131	Imidazoleglycerol-phosphate dehydratase
DK885_RS09230	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DK885_RS09240	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DK885_RS09260	COG2161	toxin-antitoxin pair type II binding
DK885_RS09265	COG4115	mRNA cleavage
DK885_RS09270	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DK885_RS09275	COG0583	DNA-binding transcription factor activity
DK885_RS09285	COG0531	amino acid
DK885_RS09290	COG2391	methyltransferase activity
DK885_RS09295	COG0425	Belongs to the sulfur carrier protein TusA family
DK885_RS09300	COG2925	Exonuclease
DK885_RS09305	COG1686	Belongs to the peptidase S11 family
DK885_RS09315	COG1289	transmembrane transporter activity
DK885_RS09360	COG2003	Belongs to the UPF0758 family
DK885_RS09365	COG2020	methyltransferase activity
DK885_RS09370	COG3468	outer membrane autotransporter barrel domain protein
DK885_RS09380	COG4771	TonB-dependent receptor
DK885_RS09390	COG4771	TonB-dependent receptor
DK885_RS09410	COG3039	Transposase
DK885_RS09420	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
DK885_RS09435	COG1376	ErfK ybiS ycfS ynhG family protein
DK885_RS09445	COG0583	DNA-binding transcription factor activity
DK885_RS09450	COG0583	DNA-binding transcription factor activity
DK885_RS09460	COG0534	Mate efflux family protein
DK885_RS09480	COG0217	transcriptional regulatory protein
DK885_RS09485	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DK885_RS09490	COG0477	Major facilitator Superfamily
DK885_RS09500	COG1388	LysM domain
DK885_RS09500	COG1470	cell adhesion involved in biofilm formation
DK885_RS09525	COG3038	cytochrome b561
DK885_RS09530	COG3443	Belongs to the bacterial solute-binding protein 9 family
DK885_RS09545	COG2351	hydroxyisourate hydrolase activity
DK885_RS09550	COG0745	RESPONSE REGULATOR receiver
DK885_RS09555	COG2205	protein histidine kinase activity
DK885_RS09580	COG1418	mRNA catabolic process
DK885_RS09585	COG0270	DNA (cytosine-5-)-methyltransferase activity
DK885_RS09590	COG3727	T/G mismatch-specific endonuclease activity
DK885_RS09595	COG0697	spore germination
DK885_RS09600	COG2354	Protein conserved in bacteria
DK885_RS09605	COG5475	Uncharacterized small protein (DUF2158)
DK885_RS09615	COG3706	GGDEF domain
DK885_RS09635	COG2197	response regulator
DK885_RS09640	COG1684	flagellar biosynthetic protein fliR
DK885_RS09645	COG1987	bacterial-type flagellum assembly
DK885_RS09650	COG1338	Plays a role in the flagellum-specific transport system
DK885_RS09655	COG3190	flagellar
DK885_RS09660	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DK885_RS09665	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DK885_RS09670	COG1580	Controls the rotational direction of flagella during chemotaxis
DK885_RS09675	COG3144	bacterial-type flagellum assembly
DK885_RS09680	COG2882	bacterial-type flagellum organization
DK885_RS09685	COG1157	protein secretion by the type III secretion system
DK885_RS09690	COG1317	bacterial-type flagellum organization
DK885_RS09695	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DK885_RS09700	COG1766	The M ring may be actively involved in energy transduction
DK885_RS09730	COG0454	-acetyltransferase
DK885_RS09735	COG2135	peptidase activity
DK885_RS09740	COG0425	Belongs to the sulfur carrier protein TusA family
DK885_RS09745	COG2391	methyltransferase activity
DK885_RS09760	COG0366	Alpha amylase catalytic
DK885_RS09770	COG1516	flagellar protein fliS
DK885_RS09775	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
DK885_RS09785	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DK885_RS09790	COG1191	sigma factor activity
DK885_RS09800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS09810	COG0765	amino acid transport
DK885_RS09815	COG1126	abc transporter atp-binding protein
DK885_RS09820	COG2197	response regulator
DK885_RS09830	COG2197	response regulator
DK885_RS09860	COG3012	SEC-C Motif Domain Protein
DK885_RS09860	COG3318	Belongs to the UPF0149 family
DK885_RS09865	COG0814	amino acid
DK885_RS09875	COG1528	Iron-storage protein
DK885_RS09895	COG1528	Iron-storage protein
DK885_RS09905	COG1879	ABC-type sugar transport system periplasmic component
DK885_RS09910	COG1129	ABC transporter
DK885_RS09915	COG1172	Belongs to the binding-protein-dependent transport system permease family
DK885_RS09920	COG1877	trehalose-phosphatase activity
DK885_RS09930	COG0589	response to stress
DK885_RS09945	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DK885_RS09950	COG1360	Flagellar Motor Protein
DK885_RS09955	COG0643	Histidine kinase
DK885_RS09955	COG2198	Histidine kinase
DK885_RS09960	COG0835	chemotaxis
DK885_RS09965	COG0840	transmembrane signaling receptor activity
DK885_RS09970	COG0840	transmembrane signaling receptor activity
DK885_RS09975	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DK885_RS09980	COG2201	protein-glutamate methylesterase activity
DK885_RS09985	COG0745	RESPONSE REGULATOR receiver
DK885_RS09990	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
DK885_RS09995	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DK885_RS10000	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DK885_RS10010	COG3755	Protein conserved in bacteria
DK885_RS10025	COG3102	Protein conserved in bacteria
DK885_RS10035	COG3005	denitrification pathway
DK885_RS10040	COG0243	molybdopterin cofactor binding
DK885_RS10055	COG3788	relative of glutathione S-transferase, MAPEG superfamily
DK885_RS10060	COG1801	Protein of unknown function DUF72
DK885_RS10065	COG1335	isochorismatase
DK885_RS10075	COG0494	nUDIX hydrolase
DK885_RS10080	COG0217	transcriptional regulatory protein
DK885_RS10110	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DK885_RS10120	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DK885_RS10125	COG0739	heme binding
DK885_RS10130	COG1560	Kdo2-lipid A biosynthetic process
DK885_RS10135	COG0469	pyruvate kinase activity
DK885_RS10140	COG1737	Transcriptional regulator
DK885_RS10145	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DK885_RS10150	COG0129	dihydroxy-acid dehydratase activity
DK885_RS10155	COG0800	Aldolase
DK885_RS10165	COG3141	response to X-ray
DK885_RS10175	COG2979	Protein of unknown function (DUF533)
DK885_RS10180	COG1770	oligopeptidase
DK885_RS10185	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DK885_RS10190	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DK885_RS10200	COG2372	response to copper ion
DK885_RS10205	COG1276	copper resistance
DK885_RS10215	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DK885_RS10235	COG3008	intermembrane lipid transfer
DK885_RS10240	COG2995	paraquat-inducible protein a
DK885_RS10245	COG1956	GAF domain-containing protein
DK885_RS10255	COG0793	Belongs to the peptidase S41A family
DK885_RS10265	COG2814	Major facilitator Superfamily
DK885_RS10270	COG1414	Transcriptional regulator
DK885_RS10305	COG2226	methyltransferase
DK885_RS10325	COG3716	PTS system mannose fructose sorbose family IID component
DK885_RS10330	COG3715	PTS system
DK885_RS10335	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS10335	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS10350	COG1253	flavin adenine dinucleotide binding
DK885_RS10355	COG2200	EAL domain
DK885_RS10360	COG1760	l-serine dehydratase
DK885_RS10370	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DK885_RS10385	COG0251	oxidation-reduction process
DK885_RS10390	COG1199	ATP-dependent helicase activity
DK885_RS10395	COG1214	PFAM Peptidase M22, glycoprotease
DK885_RS10400	COG3065	identical protein binding
DK885_RS10405	COG0318	PFAM AMP-dependent synthetase and ligase
DK885_RS10410	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
DK885_RS10415	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DK885_RS10420	COG4638	Rieske (2fe-2S)
DK885_RS10425	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DK885_RS10430	COG0473	3-isopropylmalate dehydrogenase activity
DK885_RS10435	COG0583	DNA-binding transcription factor activity
DK885_RS10445	COG3615	Tellurite resistance protein tehB
DK885_RS10455	COG2261	transglycosylase associated protein
DK885_RS10470	COG2199	diguanylate cyclase activity
DK885_RS10470	COG2203	Gaf domain
DK885_RS10475	COG3042	response to heat
DK885_RS10480	COG3189	MarR family transcriptional regulator
DK885_RS10485	COG2807	transmembrane transport
DK885_RS10490	COG2207	Transcriptional regulator
DK885_RS10505	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DK885_RS10510	COG2199	diguanylate cyclase activity
DK885_RS10515	COG2199	diguanylate cyclase activity
DK885_RS10525	COG2766	serine protein kinase
DK885_RS10530	COG3713	MltA-interacting MipA family protein
DK885_RS10535	COG0656	L-ascorbic acid biosynthetic process
DK885_RS10540	COG0676	glucose-6-phosphate 1-epimerase activity
DK885_RS10545	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DK885_RS10555	COG3139	Protein of unknown function (DUF1315)
DK885_RS10560	COG1063	alcohol dehydrogenase
DK885_RS10565	COG2271	Major facilitator Superfamily
DK885_RS10570	COG1063	alcohol dehydrogenase
DK885_RS10575	COG0191	fructose-bisphosphate aldolase activity
DK885_RS10580	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS10585	COG0667	Aldo Keto reductase
DK885_RS10590	COG1349	DNA-binding transcription factor activity
DK885_RS10595	COG2814	Major facilitator Superfamily
DK885_RS10600	COG1335	isochorismatase
DK885_RS10605	COG0252	asparaginase activity
DK885_RS10610	COG0616	signal peptide processing
DK885_RS10620	COG0778	Nitroreductase
DK885_RS10635	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DK885_RS10645	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DK885_RS10655	COG0494	nUDIX hydrolase
DK885_RS10660	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DK885_RS10665	COG2897	thiosulfate sulfurtransferase activity
DK885_RS10670	COG4136	ATPase activity
DK885_RS10675	COG4135	transport system, permease component
DK885_RS10680	COG4134	Bacterial extracellular solute-binding protein
DK885_RS10685	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DK885_RS10690	COG0398	Pfam SNARE associated Golgi protein
DK885_RS10700	COG0398	Pfam SNARE associated Golgi protein
DK885_RS10705	COG0708	Exodeoxyribonuclease III
DK885_RS10740	COG3678	ATP-independent chaperone mediated protein folding
DK885_RS10750	COG0322	excinuclease ABC activity
DK885_RS10760	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DK885_RS10770	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK885_RS10775	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK885_RS10780	COG1447	Phosphotransferase system cellobiose-specific component IIA
DK885_RS10785	COG1917	Cupin 2, conserved barrel domain protein
DK885_RS10785	COG2169	Transcriptional regulator
DK885_RS10790	COG1486	melibiose metabolic process
DK885_RS10800	COG0753	catalase activity
DK885_RS10815	COG1823	symporter activity
DK885_RS10820	COG1988	membrane-bound metal-dependent
DK885_RS10825	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DK885_RS10835	COG3001	Fructosamine kinase
DK885_RS10845	COG1105	Belongs to the carbohydrate kinase PfkB family
DK885_RS10850	COG3137	Salt-induced outer membrane protein
DK885_RS10900	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DK885_RS10900	COG0072	phenylalanine-tRNA ligase activity
DK885_RS10915	COG0386	Belongs to the glutathione peroxidase family
DK885_RS10925	COG0791	NLP P60 protein
DK885_RS10930	COG2200	EAL domain
DK885_RS10940	COG4256	Hemin uptake protein
DK885_RS10945	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DK885_RS10960	COG0574	Belongs to the PEP-utilizing enzyme family
DK885_RS10960	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DK885_RS10965	COG0318	PFAM AMP-dependent synthetase and ligase
DK885_RS10970	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
DK885_RS10975	COG0644	oxidoreductase
DK885_RS10980	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DK885_RS10985	COG2086	electron transfer activity
DK885_RS10995	COG1917	Cupin 2, conserved barrel domain protein
DK885_RS10995	COG2207	Transcriptional regulator
DK885_RS11000	COG1960	acyl-CoA dehydrogenase activity
DK885_RS11005	COG4670	ketone body catabolic process
DK885_RS11020	COG2271	Major facilitator Superfamily
DK885_RS11025	COG0738	Major facilitator superfamily
DK885_RS11040	COG0628	permease
DK885_RS11050	COG0247	lactate metabolic process
DK885_RS11050	COG0277	FAD linked oxidase domain protein
DK885_RS11055	COG2050	protein possibly involved in aromatic compounds catabolism
DK885_RS11065	COG0316	Belongs to the HesB IscA family
DK885_RS11070	COG0719	Fe-S assembly protein
DK885_RS11075	COG0396	ATPase activity
DK885_RS11080	COG0719	Fe-S assembly protein
DK885_RS11095	COG1376	ErfK ybiS ycfS ynhG family protein
DK885_RS11100	COG4238	major outer membrane lipoprotein
DK885_RS11105	COG0469	pyruvate kinase activity
DK885_RS11115	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS11120	COG2414	aldehyde ferredoxin oxidoreductase
DK885_RS11130	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS11135	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
DK885_RS11145	COG4529	Protein conserved in bacteria
DK885_RS11165	COG3468	outer membrane autotransporter barrel domain protein
DK885_RS11175	COG0307	riboflavin synthase, alpha
DK885_RS11180	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DK885_RS11185	COG2814	Major facilitator Superfamily
DK885_RS11190	COG0583	DNA-binding transcription factor activity
DK885_RS11210	COG2814	Major facilitator Superfamily
DK885_RS11215	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DK885_RS11220	COG0791	NLP P60 protein
DK885_RS11225	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DK885_RS11230	COG1201	RNA secondary structure unwinding
DK885_RS11235	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DK885_RS11240	COG0346	lactoylglutathione lyase activity
DK885_RS11245	COG1902	pentaerythritol trinitrate reductase activity
DK885_RS11250	COG1309	transcriptional regulator
DK885_RS11255	COG3313	Fe-S protein
DK885_RS11260	COG4989	oxidoreductase activity
DK885_RS11265	COG2032	superoxide dismutase activity
DK885_RS11270	COG1289	transmembrane transporter activity
DK885_RS11275	COG1566	PFAM secretion protein HlyD family protein
DK885_RS11290	COG3133	Outer membrane lipoprotein
DK885_RS11300	COG3895	Periplasmic Protein
DK885_RS11315	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
DK885_RS11320	COG0625	glutathione transferase activity
DK885_RS11325	COG3104	oligopeptide transport
DK885_RS11335	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DK885_RS11345	COG4659	FMN binding
DK885_RS11390	COG0673	inositol 2-dehydrogenase activity
DK885_RS11400	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DK885_RS11405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS11405	COG1263	PTS System
DK885_RS11410	COG1609	Transcriptional regulator
DK885_RS11415	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS11420	COG1309	transcriptional regulator
DK885_RS11425	COG3250	beta-galactosidase activity
DK885_RS11430	COG2211	Major facilitator Superfamily
DK885_RS11440	COG5339	Protein conserved in bacteria
DK885_RS11445	COG1482	cell wall glycoprotein biosynthetic process
DK885_RS11450	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DK885_RS11450	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DK885_RS11455	COG0114	fumarate hydratase activity
DK885_RS11465	COG2205	protein histidine kinase activity
DK885_RS11470	COG0745	RESPONSE REGULATOR receiver
DK885_RS11475	COG3136	membrane protein required for alginate biosynthesis
DK885_RS11485	COG0531	amino acid
DK885_RS11500	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DK885_RS11505	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DK885_RS11510	COG0628	permease
DK885_RS11530	COG3591	Belongs to the peptidase S1B family
DK885_RS11550	COG2814	Major facilitator Superfamily
DK885_RS11555	COG0583	DNA-binding transcription factor activity
DK885_RS11560	COG1940	carbohydrate kinase activity
DK885_RS11565	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DK885_RS11575	COG3381	protein complex oligomerization
DK885_RS11580	COG3302	dmso reductase anchor subunit
DK885_RS11585	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS11590	COG0243	molybdopterin cofactor binding
DK885_RS11595	COG0243	molybdopterin cofactor binding
DK885_RS11610	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DK885_RS11630	COG4948	Mandelate Racemase Muconate Lactonizing
DK885_RS11635	COG1063	alcohol dehydrogenase
DK885_RS11645	COG0582	viral genome integration into host DNA
DK885_RS11690	COG1396	sequence-specific DNA binding
DK885_RS11720	COG3077	Addiction module antitoxin, RelB DinJ family
DK885_RS11725	COG2026	Addiction module toxin, RelE StbE family
DK885_RS11745	COG1403	HNH endonuclease
DK885_RS11750	COG0484	heat shock protein binding
DK885_RS11755	COG1278	Cold shock
DK885_RS11760	COG1278	Cold shock
DK885_RS11775	COG3772	lysozyme
DK885_RS11785	COG1278	Cold shock
DK885_RS11805	COG5562	phage envelope protein
DK885_RS11820	COG4220	transposase activity
DK885_RS11825	COG5301	cellulose 1,4-beta-cellobiosidase activity
DK885_RS11830	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DK885_RS11835	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DK885_RS11845	COG0477	Major facilitator Superfamily
DK885_RS11850	COG0246	Mannitol dehydrogenase
DK885_RS11860	COG1802	Transcriptional regulator
DK885_RS11865	COG4221	oxidoreductase activity
DK885_RS11870	COG0339	signal peptide processing
DK885_RS11875	COG1546	Belongs to the CinA family
DK885_RS11880	COG3111	PFAM Bacterial OB fold (BOF) protein
DK885_RS11885	COG3706	GGDEF domain
DK885_RS11895	COG2814	Major facilitator Superfamily
DK885_RS11900	COG0697	spore germination
DK885_RS11910	COG4977	sequence-specific DNA binding
DK885_RS11915	COG1846	Transcriptional regulator
DK885_RS11935	COG0583	DNA-binding transcription factor activity
DK885_RS11940	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS11945	COG2066	Belongs to the glutaminase family
DK885_RS11955	COG2199	diguanylate cyclase activity
DK885_RS11975	COG3781	membrane
DK885_RS12025	COG3210	domain, Protein
DK885_RS12025	COG2911	Protein conserved in bacteria
DK885_RS12035	COG1396	sequence-specific DNA binding
DK885_RS12040	COG3550	peptidyl-serine autophosphorylation
DK885_RS12060	COG3539	Fimbrial protein
DK885_RS12065	COG3539	Fimbrial protein
DK885_RS12070	COG3539	Fimbrial protein
DK885_RS12075	COG0243	molybdopterin cofactor binding
DK885_RS12085	COG2207	Transcriptional regulator
DK885_RS12090	COG3119	arylsulfatase activity
DK885_RS12095	COG0641	radical SAM
DK885_RS12100	COG4178	(ABC) transporter
DK885_RS12105	COG4771	TonB-dependent receptor
DK885_RS12110	COG0612	Peptidase, M16
DK885_RS12115	COG0076	glutamate decarboxylase activity
DK885_RS12120	COG0531	amino acid
DK885_RS12125	COG1649	PFAM Uncharacterised BCR, COG1649
DK885_RS12130	COG3706	GGDEF domain
DK885_RS12135	COG2202	Pas domain
DK885_RS12135	COG2200	EAL domain
DK885_RS12135	COG2199	diguanylate cyclase activity
DK885_RS12140	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
DK885_RS12145	COG0747	negative chemotaxis
DK885_RS12150	COG0601	transmembrane transport
DK885_RS12155	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DK885_RS12160	COG0444	Belongs to the ABC transporter superfamily
DK885_RS12165	COG4608	Belongs to the ABC transporter superfamily
DK885_RS12170	COG1764	response to oxidative stress
DK885_RS12195	COG1064	alcohol dehydrogenase
DK885_RS12200	COG3093	addiction module antidote protein HigA
DK885_RS12205	COG2864	formate dehydrogenase
DK885_RS12210	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS12220	COG0697	spore germination
DK885_RS12225	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DK885_RS12235	COG2223	nitrite transmembrane transporter activity
DK885_RS12240	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DK885_RS12245	COG1140	nitrate reductase beta subunit
DK885_RS12250	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DK885_RS12255	COG2181	nitrate reductase activity
DK885_RS12260	COG0384	phenazine biosynthesis protein PhzF
DK885_RS12265	COG2162	N-hydroxyarylamine O-acetyltransferase activity
DK885_RS12270	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DK885_RS12280	COG5433	transposase activity
DK885_RS12295	COG3209	COG3209 Rhs family protein
DK885_RS12310	COG0625	glutathione transferase activity
DK885_RS12315	COG1113	amino acid transport
DK885_RS12320	COG3391	amine dehydrogenase activity
DK885_RS12335	COG4772	TonB-dependent receptor
DK885_RS12340	COG1802	Transcriptional regulator
DK885_RS12345	COG2130	NADP-dependent
DK885_RS12355	COG1247	-acetyltransferase
DK885_RS12360	COG3238	Protein conserved in bacteria
DK885_RS12390	COG1177	transmembrane transport
DK885_RS12395	COG1176	ABC-type spermidine putrescine transport system, permease component I
DK885_RS12400	COG3842	ATPase activity
DK885_RS12405	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DK885_RS12410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DK885_RS12415	COG1598	PFAM Uncharacterised protein family UPF0150
DK885_RS12420	COG1724	mRNA binding
DK885_RS12430	COG0826	peptidase U32
DK885_RS12435	COG1396	sequence-specific DNA binding
DK885_RS12440	COG3135	benzoate transporter
DK885_RS12445	COG0675	Transposase, IS605 OrfB family
DK885_RS12460	COG0500	methyltransferase
DK885_RS12465	COG1275	C4-dicarboxylate transporter malic acid transport protein
DK885_RS12470	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DK885_RS12475	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DK885_RS12480	COG2841	Protein conserved in bacteria
DK885_RS12500	COG5383	Protein conserved in bacteria
DK885_RS12505	COG0583	DNA-binding transcription factor activity
DK885_RS12510	COG0840	transmembrane signaling receptor activity
DK885_RS12525	COG3038	cytochrome b561
DK885_RS12530	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DK885_RS12545	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS12550	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DK885_RS12555	COG1643	Atp-dependent helicase
DK885_RS12565	COG2453	phosphatase
DK885_RS12565	COG0671	phosphoesterase, PA-phosphatase related
DK885_RS12570	COG2267	carboxylic ester hydrolase activity
DK885_RS12575	COG4589	Belongs to the CDS family
DK885_RS12580	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DK885_RS12590	COG0667	Aldo Keto reductase
DK885_RS12605	COG2826	transposase and inactivated derivatives, IS30 family
DK885_RS12625	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DK885_RS12630	COG3327	negative regulation of DNA-templated transcription, initiation
DK885_RS12635	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
DK885_RS12640	COG0183	Belongs to the thiolase family
DK885_RS12645	COG2050	protein possibly involved in aromatic compounds catabolism
DK885_RS12650	COG1250	3-hydroxyacyl-CoA dehydrogenase
DK885_RS12655	COG1024	Enoyl-CoA hydratase
DK885_RS12660	COG1024	Enoyl-CoA hydratase
DK885_RS12665	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DK885_RS12670	COG2151	metal-sulfur cluster biosynthetic enzyme
DK885_RS12675	COG3396	Phenylacetate-CoA oxygenase
DK885_RS12680	COG3460	Phenylacetate-CoA oxygenase
DK885_RS12685	COG3396	Phenylacetate-CoA oxygenase
DK885_RS12690	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS12690	COG2030	dehydratase
DK885_RS12695	COG3733	amine oxidase
DK885_RS12700	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS12705	COG2207	Transcriptional regulator
DK885_RS12710	COG3784	Protein of unknown function (DUF1318)
DK885_RS12720	COG2911	Protein conserved in bacteria
DK885_RS12725	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DK885_RS12730	COG3187	Heat shock protein
DK885_RS12735	COG3042	response to heat
DK885_RS12740	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DK885_RS12740	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DK885_RS12740	COG1013	pyruvate-flavodoxin oxidoreductase activity
DK885_RS12740	COG0674	pyruvate-flavodoxin oxidoreductase activity
DK885_RS12750	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DK885_RS12755	COG0589	response to stress
DK885_RS12765	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DK885_RS12770	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DK885_RS12775	COG5301	cellulose 1,4-beta-cellobiosidase activity
DK885_RS12785	COG3039	Transposase
DK885_RS12815	COG1475	DNA binding
DK885_RS12825	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DK885_RS12840	COG1484	DNA-dependent DNA replication
DK885_RS12845	COG3756	Protein conserved in bacteria
DK885_RS12855	COG4197	protein conserved in bacteria, prophage-related
DK885_RS12900	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DK885_RS12905	COG3723	Recombinational DNA repair protein, rece pathway
DK885_RS12925	COG0582	viral genome integration into host DNA
DK885_RS12935	COG0513	Belongs to the DEAD box helicase family
DK885_RS12950	COG3706	GGDEF domain
DK885_RS12955	COG2840	Smr protein MutS2
DK885_RS12965	COG0583	DNA-binding transcription factor activity
DK885_RS12970	COG1473	amidohydrolase
DK885_RS12975	COG1473	amidohydrolase
DK885_RS12985	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
DK885_RS12990	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DK885_RS12995	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DK885_RS13000	COG0589	response to stress
DK885_RS13005	COG3182	Iron-regulated membrane protein
DK885_RS13015	COG0668	transmembrane transport
DK885_RS13020	COG4166	transmembrane transport
DK885_RS13025	COG0583	DNA-binding transcription factor activity
DK885_RS13030	COG1073	alpha beta
DK885_RS13035	COG0702	epimerase
DK885_RS13040	COG2866	Carboxypeptidase
DK885_RS13045	COG4948	Mandelate Racemase Muconate Lactonizing
DK885_RS13050	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DK885_RS13055	COG3283	Transcriptional regulator of aromatic amino acids metabolism
DK885_RS13065	COG3106	COG3106 Predicted ATPase
DK885_RS13070	COG1609	Transcriptional regulator
DK885_RS13085	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DK885_RS13090	COG1554	hydrolase, family 65, central catalytic
DK885_RS13095	COG0673	inositol 2-dehydrogenase activity
DK885_RS13100	COG1082	Xylose isomerase domain protein TIM barrel
DK885_RS13105	COG1063	alcohol dehydrogenase
DK885_RS13110	COG0395	ABC-type sugar transport system, permease component
DK885_RS13115	COG1175	transmembrane transport
DK885_RS13120	COG1653	transport
DK885_RS13125	COG0366	Alpha amylase catalytic
DK885_RS13130	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DK885_RS13140	COG1983	PspC domain protein
DK885_RS13150	COG1842	Phage shock protein A
DK885_RS13155	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DK885_RS13160	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DK885_RS13165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DK885_RS13170	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS13180	COG1396	sequence-specific DNA binding
DK885_RS13180	COG1917	Cupin 2, conserved barrel domain protein
DK885_RS13185	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DK885_RS13190	COG0174	glutamine synthetase
DK885_RS13195	COG0531	amino acid
DK885_RS13210	COG4166	transmembrane transport
DK885_RS13215	COG4168	peptide transport system, permease
DK885_RS13220	COG4171	peptide transport system, permease
DK885_RS13225	COG4172	Belongs to the ABC transporter superfamily
DK885_RS13230	COG4172	Belongs to the ABC transporter superfamily
DK885_RS13235	COG2852	Protein conserved in bacteria
DK885_RS13240	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DK885_RS13245	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DK885_RS13245	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DK885_RS13260	COG5001	Diguanylate cyclase
DK885_RS13270	COG1349	DNA-binding transcription factor activity
DK885_RS13280	COG0023	Translation Initiation Factor
DK885_RS13290	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DK885_RS13295	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
DK885_RS13300	COG0671	phosphoesterase, PA-phosphatase related
DK885_RS13310	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DK885_RS13330	COG0583	DNA-binding transcription factor activity
DK885_RS13340	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DK885_RS13355	COG0616	signal peptide processing
DK885_RS13360	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS13365	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
DK885_RS13370	COG1187	pseudouridine synthase activity
DK885_RS13375	COG4907	membrane protein (DUF2207)
DK885_RS13380	COG0009	L-threonylcarbamoyladenylate synthase
DK885_RS13385	COG0613	PHP domain protein
DK885_RS13395	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DK885_RS13400	COG0512	Glutamine amidotransferase of anthranilate synthase
DK885_RS13400	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DK885_RS13405	COG0134	indole-3-glycerol-phosphate synthase activity
DK885_RS13405	COG0135	phosphoribosylanthranilate isomerase activity
DK885_RS13420	COG3729	General stress protein
DK885_RS13425	COG3685	Protein conserved in bacteria
DK885_RS13430	COG3685	Protein conserved in bacteria
DK885_RS13435	COG3047	cAMP biosynthetic process
DK885_RS13455	COG1607	acyl-coa hydrolase
DK885_RS13460	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DK885_RS13465	COG2350	Protein conserved in bacteria
DK885_RS13470	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DK885_RS13490	COG4608	Belongs to the ABC transporter superfamily
DK885_RS13495	COG0444	Belongs to the ABC transporter superfamily
DK885_RS13500	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DK885_RS13505	COG0601	transmembrane transport
DK885_RS13510	COG4166	transmembrane transport
DK885_RS13520	COG2095	MarC family integral membrane protein
DK885_RS13525	COG1012	belongs to the aldehyde dehydrogenase family
DK885_RS13525	COG1454	alcohol dehydrogenase
DK885_RS13535	COG1435	thymidine kinase activity
DK885_RS13545	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DK885_RS13550	COG0745	RESPONSE REGULATOR receiver
DK885_RS13555	COG1752	Esterase of the alpha-beta hydrolase superfamily
DK885_RS13565	COG0788	formyltetrahydrofolate deformylase activity
DK885_RS13600	COG2181	nitrate reductase activity
DK885_RS13605	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DK885_RS13610	COG1140	nitrate reductase beta subunit
DK885_RS13615	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DK885_RS13620	COG2223	nitrite transmembrane transporter activity
DK885_RS13630	COG3850	Histidine kinase
DK885_RS13635	COG2197	response regulator
DK885_RS13640	COG4932	domain protein
DK885_RS13645	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DK885_RS13650	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
DK885_RS13655	COG4572	Cation transport regulator
DK885_RS13660	COG0387	Pfam Sodium calcium exchanger
DK885_RS13690	COG2912	Transglutaminase-like superfamily
DK885_RS13695	COG3094	Invasion gene expression up-regulator, SirB
DK885_RS13700	COG2890	protein-(glutamine-N5) methyltransferase activity
DK885_RS13730	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DK885_RS13740	COG0659	secondary active sulfate transmembrane transporter activity
DK885_RS13755	COG0012	GTP binding
DK885_RS13770	COG3468	outer membrane autotransporter barrel domain protein
DK885_RS13775	COG3284	Transcriptional regulator
DK885_RS13780	COG2376	Dihydroxyacetone kinase
DK885_RS13785	COG1461	Dihydroxyacetone kinase
DK885_RS13790	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS13790	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
DK885_RS13790	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DK885_RS13810	COG2261	transglycosylase associated protein
DK885_RS13815	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
DK885_RS13830	COG1619	proteins homologs of microcin C7 resistance protein MccF
DK885_RS13845	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DK885_RS13855	COG2719	SpoVR family
DK885_RS13870	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DK885_RS13875	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DK885_RS13880	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DK885_RS13895	COG0179	Fumarylacetoacetate (FAA) hydrolase
DK885_RS13925	COG2894	cell division
DK885_RS13985	COG2200	EAL domain
DK885_RS14010	COG2200	EAL domain
DK885_RS14015	COG0789	Transcriptional regulator
DK885_RS14020	COG5562	phage envelope protein
DK885_RS14030	COG0538	isocitrate dehydrogenase activity
DK885_RS14035	COG1403	HNH endonuclease
DK885_RS14040	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DK885_RS14050	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DK885_RS14065	COG3778	Protein conserved in bacteria
DK885_RS14070	COG3299	homolog of phage Mu protein gp47
DK885_RS14075	COG4695	Portal protein
DK885_RS14085	COG4626	Terminase
DK885_RS14085	COG1802	Transcriptional regulator
DK885_RS14100	COG4197	protein conserved in bacteria, prophage-related
DK885_RS14105	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DK885_RS14135	COG0582	viral genome integration into host DNA
DK885_RS14150	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DK885_RS14155	COG0538	isocitrate dehydrogenase activity
DK885_RS14160	COG1187	pseudouridine synthase activity
DK885_RS14180	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DK885_RS14185	COG0745	RESPONSE REGULATOR receiver
DK885_RS14190	COG2205	protein histidine kinase activity
DK885_RS14195	COG2850	peptidyl-arginine hydroxylation
DK885_RS14210	COG3842	ATPase activity
DK885_RS14220	COG1177	transmembrane transport
DK885_RS14225	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DK885_RS14235	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DK885_RS14240	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DK885_RS14250	COG4591	ABC-type transport system involved in lipoprotein release permease component
DK885_RS14255	COG1136	(ABC) transporter
DK885_RS14260	COG4591	ABC-type transport system involved in lipoprotein release permease component
DK885_RS14265	COG4763	Acyl-transferase
DK885_RS14270	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DK885_RS14275	COG1388	LysM domain
DK885_RS14275	COG1376	ErfK ybiS ycfS ynhG family protein
DK885_RS14285	COG1309	transcriptional regulator
DK885_RS14290	COG3134	Outer membrane lipoprotein
DK885_RS14295	COG1252	NADH dehydrogenase
DK885_RS14315	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
DK885_RS14320	COG5633	Lipoprotein
DK885_RS14325	COG0537	adenosine 5'-monophosphoramidase activity
DK885_RS14330	COG4773	Receptor
DK885_RS14335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS14335	COG1263	PTS System
DK885_RS14340	COG0084	hydrolase, TatD family'
DK885_RS14345	COG0470	DNA polymerase III
DK885_RS14355	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DK885_RS14360	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DK885_RS14365	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DK885_RS14375	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS14380	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DK885_RS14400	COG1399	metal-binding, possibly nucleic acid-binding protein
DK885_RS14405	COG0424	maF-like protein
DK885_RS14410	COG0564	pseudouridine synthase activity
DK885_RS14420	COG1530	ribonuclease E activity
DK885_RS14425	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DK885_RS14430	COG1256	bacterial-type flagellum assembly
DK885_RS14435	COG3951	Flagellar rod assembly protein muramidase FlgJ
DK885_RS14435	COG1705	Flagellar rod assembly protein muramidase FlgJ
DK885_RS14450	COG4786	Flagellar basal body rod
DK885_RS14455	COG4787	bacterial-type flagellum-dependent cell motility
DK885_RS14460	COG1749	Flagellar hook protein flgE
DK885_RS14465	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DK885_RS14470	COG1558	bacterial-type flagellum-dependent cell motility
DK885_RS14475	COG1815	bacterial-type flagellum-dependent cell motility
DK885_RS14480	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
DK885_RS14485	COG2747	anti-sigma28 factor FlgM
DK885_RS14490	COG3418	PFAM FlgN family protein
DK885_RS14495	COG0728	peptidoglycan biosynthetic process
DK885_RS14500	COG0673	inositol 2-dehydrogenase activity
DK885_RS14510	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DK885_RS14520	COG2999	glutathione oxidoreductase activity
DK885_RS14560	COG3038	cytochrome b561
DK885_RS14565	COG2353	YceI-like domain
DK885_RS14575	COG1560	Kdo2-lipid A biosynthetic process
DK885_RS14590	COG5645	(Lipo)protein
DK885_RS14595	COG2943	transferase activity, transferring hexosyl groups
DK885_RS14620	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DK885_RS14625	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DK885_RS14660	COG2197	response regulator
DK885_RS14675	COG1462	curli production assembly transport component CsgG
DK885_RS14685	COG3381	protein complex oligomerization
DK885_RS14740	COG3706	GGDEF domain
DK885_RS14745	COG0457	Tetratricopeptide repeat
DK885_RS14750	COG0726	polysaccharide deacetylase
DK885_RS14750	COG1649	PFAM Uncharacterised BCR, COG1649
DK885_RS14755	COG1215	transferase activity, transferring glycosyl groups
DK885_RS14760	COG3658	cytochrome
DK885_RS14765	COG1702	phosphate starvation-inducible protein PhoH
DK885_RS14770	COG2837	iron assimilation
DK885_RS14775	COG2822	iron ion transport
DK885_RS14800	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DK885_RS14815	COG0506	proline dehydrogenase activity
DK885_RS14815	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DK885_RS14815	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DK885_RS14820	COG1309	transcriptional regulator
DK885_RS14855	COG2233	PERMEase
DK885_RS14860	COG3729	General stress protein
DK885_RS14900	COG3381	protein complex oligomerization
DK885_RS14905	COG0243	molybdopterin cofactor binding
DK885_RS14910	COG3005	denitrification pathway
DK885_RS14915	COG0745	RESPONSE REGULATOR receiver
DK885_RS14920	COG1879	ABC-type sugar transport system periplasmic component
DK885_RS14925	COG0784	Response regulator, receiver
DK885_RS14925	COG2205	protein histidine kinase activity
DK885_RS14925	COG2198	Histidine kinase
DK885_RS14930	COG0348	domain, Protein
DK885_RS14950	COG1278	Cold shock
DK885_RS14955	COG1278	Cold shock
DK885_RS14985	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DK885_RS14990	COG1596	polysaccharide export
DK885_RS14995	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DK885_RS15000	COG0489	protein tyrosine kinase activity
DK885_RS15000	COG3206	protein involved in exopolysaccharide biosynthesis
DK885_RS15015	COG1294	oxidase, subunit
DK885_RS15020	COG1271	oxidase subunit
DK885_RS15025	COG1773	rubredoxin
DK885_RS15030	COG1999	signal sequence binding
DK885_RS15035	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DK885_RS15040	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
DK885_RS15045	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
DK885_RS15050	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
DK885_RS15060	COG0670	Belongs to the BI1 family
DK885_RS15065	COG2920	part of a sulfur-relay system
DK885_RS15070	COG1254	Belongs to the acylphosphatase family
DK885_RS15085	COG1832	CoA-binding protein
DK885_RS15100	COG0210	DNA helicase
DK885_RS15105	COG3304	Inner membrane component domain
DK885_RS15110	COG1289	transmembrane transporter activity
DK885_RS15115	COG3070	regulator of competence-specific genes
DK885_RS15130	COG2885	chlorophyll binding
DK885_RS15130	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DK885_RS15140	COG1067	ATP-dependent peptidase activity
DK885_RS15150	COG3130	regulation of translation
DK885_RS15155	COG3009	Protein conserved in bacteria
DK885_RS15160	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DK885_RS15160	COG3008	intermembrane lipid transfer
DK885_RS15165	COG2995	paraquat-inducible protein a
DK885_RS15170	COG0488	(ABC) transporter
DK885_RS15180	COG3217	Mosc domain protein beta barrel domain protein
DK885_RS15180	COG0633	Ferredoxin
DK885_RS15195	COG3121	Chaperone
DK885_RS15200	COG3539	Fimbrial protein
DK885_RS15205	COG3539	Fimbrial protein
DK885_RS15210	COG3539	Fimbrial protein
DK885_RS15215	COG3188	usher protein
DK885_RS15220	COG3121	Chaperone
DK885_RS15225	COG3539	Fimbrial protein
DK885_RS15235	COG0431	NADPH-dependent FMN reductase
DK885_RS15240	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DK885_RS15250	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DK885_RS15255	COG1116	anion transmembrane transporter activity
DK885_RS15260	COG0308	aminopeptidase N
DK885_RS15285	COG1448	Aminotransferase
DK885_RS15290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DK885_RS15295	COG3108	Peptidase M15
DK885_RS15305	COG2989	Protein conserved in bacteria
DK885_RS15315	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
DK885_RS15325	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DK885_RS15330	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DK885_RS15335	COG3173	Aminoglycoside phosphotransferase
DK885_RS15350	COG3214	Protein conserved in bacteria
DK885_RS15355	COG1663	tetraacyldisaccharide 4'-kinase activity
DK885_RS15360	COG1132	(ABC) transporter
DK885_RS15365	COG0658	competence protein
DK885_RS15365	COG2333	competence protein COMEC
DK885_RS15375	COG0539	negative regulation of cytoplasmic translation
DK885_RS15385	COG0501	Belongs to the peptidase M48B family
DK885_RS15400	COG2323	membrane
DK885_RS15405	COG1944	ATP diphosphatase activity
DK885_RS15410	COG2116	formate transmembrane transporter activity
DK885_RS15415	COG1882	Formate acetyltransferase
DK885_RS15420	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DK885_RS15425	COG2249	NAD(P)H dehydrogenase (quinone) activity
DK885_RS15430	COG0583	DNA-binding transcription factor activity
DK885_RS15435	COG0531	amino acid
DK885_RS15445	COG1335	isochorismatase
DK885_RS15450	COG3302	dmso reductase anchor subunit
DK885_RS15455	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS15460	COG0243	molybdopterin cofactor binding
DK885_RS15470	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DK885_RS15480	COG1178	ABC-type Fe3 transport system permease component
DK885_RS15480	COG1674	ftsk spoiiie
DK885_RS15485	COG1522	sequence-specific DNA binding
DK885_RS15495	COG0492	ferredoxin-NADP+ reductase activity
DK885_RS15500	COG4988	ABC transporter
DK885_RS15505	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DK885_RS15525	COG0542	response to heat
DK885_RS15535	COG1278	Cold shock
DK885_RS15540	COG0577	efflux transmembrane transporter activity
DK885_RS15540	COG1136	(ABC) transporter
DK885_RS15545	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK885_RS15550	COG2990	Protein conserved in bacteria
DK885_RS15555	COG3593	DNA synthesis involved in DNA repair
DK885_RS15570	COG2431	L-lysine efflux transmembrane transporter activity
DK885_RS15580	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DK885_RS15585	COG0028	Belongs to the TPP enzyme family
DK885_RS15590	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DK885_RS15595	COG0702	epimerase
DK885_RS15600	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DK885_RS15605	COG3023	N-Acetylmuramoyl-L-alanine amidase
DK885_RS15620	COG1126	abc transporter atp-binding protein
DK885_RS15625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS15630	COG4215	(ABC) transporter
DK885_RS15635	COG4160	amino acid transport
DK885_RS15640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS15655	COG1177	transmembrane transport
DK885_RS15660	COG1176	ABC-type spermidine putrescine transport system, permease component I
DK885_RS15665	COG3842	ATPase activity
DK885_RS15670	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DK885_RS15690	COG0778	Nitroreductase
DK885_RS15700	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DK885_RS15715	COG3226	Transcriptional regulator
DK885_RS15720	COG0738	Major facilitator superfamily
DK885_RS15725	COG0561	phosphatase activity
DK885_RS15735	COG2814	Major facilitator Superfamily
DK885_RS15740	COG0671	phosphoesterase, PA-phosphatase related
DK885_RS15745	COG1349	DNA-binding transcription factor activity
DK885_RS15750	COG1686	Belongs to the peptidase S11 family
DK885_RS15755	COG0625	glutathione transferase activity
DK885_RS15760	COG2133	pyrroloquinoline quinone binding
DK885_RS15775	COG2199	diguanylate cyclase activity
DK885_RS15780	COG2200	EAL domain
DK885_RS15785	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DK885_RS15795	COG0747	negative chemotaxis
DK885_RS15800	COG4172	Belongs to the ABC transporter superfamily
DK885_RS15805	COG1446	asparaginase
DK885_RS15810	COG0303	'Molybdopterin
DK885_RS15815	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DK885_RS15820	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DK885_RS15825	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DK885_RS15830	COG1882	Formate acetyltransferase
DK885_RS15835	COG0561	phosphatase activity
DK885_RS15845	COG0488	(ABC) transporter
DK885_RS15850	COG1376	ErfK ybiS ycfS ynhG family protein
DK885_RS15855	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DK885_RS15860	COG1321	iron dependent repressor
DK885_RS15870	COG2194	sulfuric ester hydrolase activity
DK885_RS15875	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DK885_RS15880	COG5006	permease, DMT superfamily
DK885_RS15905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS15910	COG0765	amino acid transport
DK885_RS15915	COG1126	abc transporter atp-binding protein
DK885_RS15920	COG0668	transmembrane transport
DK885_RS15935	COG4774	siderophore transport
DK885_RS15945	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DK885_RS15955	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
DK885_RS15960	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DK885_RS15965	COG1199	ATP-dependent helicase activity
DK885_RS15975	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
DK885_RS15980	COG0513	Belongs to the DEAD box helicase family
DK885_RS15985	COG1309	transcriptional regulator
DK885_RS15995	COG1131	(ABC) transporter
DK885_RS16000	COG0842	Transport permease protein
DK885_RS16005	COG0842	Transport permease protein
DK885_RS16015	COG3568	Endonuclease Exonuclease Phosphatase
DK885_RS16020	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DK885_RS16025	COG0392	lysyltransferase activity
DK885_RS16030	COG0670	Belongs to the BI1 family
DK885_RS16035	COG0670	Belongs to the BI1 family
DK885_RS16040	COG0314	molybdopterin synthase activity
DK885_RS16045	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DK885_RS16055	COG0521	Mo-molybdopterin cofactor biosynthetic process
DK885_RS16065	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DK885_RS16075	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DK885_RS16080	COG2226	methyltransferase
DK885_RS16095	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DK885_RS16100	COG1881	PFAM PEBP family protein
DK885_RS16110	COG4677	pectinesterase activity
DK885_RS16115	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DK885_RS16120	COG0471	metal ion transport
DK885_RS16125	COG2828	Protein conserved in bacteria
DK885_RS16130	COG0583	DNA-binding transcription factor activity
DK885_RS16140	COG0561	phosphatase activity
DK885_RS16145	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
DK885_RS16150	COG4149	molybdate abc transporter
DK885_RS16155	COG0725	ABC transporter, periplasmic molybdate-binding protein
DK885_RS16170	COG2005	Transcriptional regulator
DK885_RS16170	COG3585	molybdate ion transport
DK885_RS16175	COG1119	ATPase activity
DK885_RS16180	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DK885_RS16185	COG1085	galactose-1-phosphate uridylyltransferase
DK885_RS16195	COG2017	converts alpha-aldose to the beta-anomer
DK885_RS16205	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DK885_RS16220	COG1230	cation diffusion facilitator family transporter
DK885_RS16225	COG3201	nicotinamide mononucleotide transporter
DK885_RS16275	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DK885_RS16280	COG2885	chlorophyll binding
DK885_RS16290	COG3064	Membrane
DK885_RS16295	COG0848	biopolymer transport protein
DK885_RS16300	COG0811	peptide transport
DK885_RS16305	COG0824	Thioesterase
DK885_RS16310	COG3790	cyd operon protein YbgE
DK885_RS16315	COG4890	Cyd operon protein YbgT
DK885_RS16320	COG1294	oxidase, subunit
DK885_RS16325	COG1271	oxidase subunit
DK885_RS16335	COG0383	alpha-mannosidase activity
DK885_RS16340	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS16340	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS16340	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS16345	COG2188	Transcriptional regulator
DK885_RS16350	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DK885_RS16360	COG0508	dehydrogenase complex catalyzes the overall conversion of
DK885_RS16365	COG0567	Dehydrogenase, E1 component
DK885_RS16370	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DK885_RS16375	COG1053	succinate dehydrogenase
DK885_RS16380	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DK885_RS16385	COG2009	succinate dehydrogenase
DK885_RS16400	COG0372	Belongs to the citrate synthase family
DK885_RS16405	COG3539	Fimbrial protein
DK885_RS16410	COG3188	usher protein
DK885_RS16415	COG3121	Chaperone
DK885_RS16420	COG3539	Fimbrial protein
DK885_RS16425	COG3180	Ammonia monooxygenase
DK885_RS16440	COG1984	allophanate hydrolase subunit 2
DK885_RS16445	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DK885_RS16450	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DK885_RS16455	COG3104	oligopeptide transport
DK885_RS16460	COG0415	Belongs to the DNA photolyase family
DK885_RS16465	COG3272	Protein of unknown function (DUF1722)
DK885_RS16500	COG3209	COG3209 Rhs family protein
DK885_RS16530	COG2205	protein histidine kinase activity
DK885_RS16535	COG0745	RESPONSE REGULATOR receiver
DK885_RS16545	COG1982	Orn Lys Arg decarboxylase major
DK885_RS16550	COG0531	amino acid
DK885_RS16570	COG0033	Phosphoglucomutase
DK885_RS16575	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
DK885_RS16580	COG0596	Alpha beta hydrolase
DK885_RS16590	COG0716	FMN binding
DK885_RS16600	COG0735	belongs to the Fur family
DK885_RS16620	COG2190	(PTS) system
DK885_RS16620	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS16620	COG1263	PTS System
DK885_RS16630	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DK885_RS16635	COG1846	Transcriptional regulator
DK885_RS16635	COG1940	carbohydrate kinase activity
DK885_RS16640	COG0647	UMP catabolic process
DK885_RS16650	COG0367	asparagine synthase
DK885_RS16690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DK885_RS16700	COG1702	phosphate starvation-inducible protein PhoH
DK885_RS16710	COG4535	Mg2 and Co2 transporter CorC
DK885_RS16715	COG0815	Transfers the fatty acyl group on membrane lipoproteins
DK885_RS16730	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK885_RS16735	COG0765	amino acid transport
DK885_RS16740	COG0765	amino acid transport
DK885_RS16745	COG1126	abc transporter atp-binding protein
DK885_RS16755	COG0443	Heat shock 70 kDa protein
DK885_RS16760	COG2214	Heat shock protein DnaJ domain protein
DK885_RS16770	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DK885_RS16775	COG2214	Heat shock protein DnaJ domain protein
DK885_RS16785	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DK885_RS16790	COG2888	peptidyl-tyrosine sulfation
DK885_RS16805	COG1466	dna polymerase III delta subunit
DK885_RS16815	COG0406	alpha-ribazole phosphatase activity
DK885_RS16820	COG0799	negative regulation of ribosome biogenesis
DK885_RS16830	COG0768	penicillin binding
DK885_RS16835	COG0772	Belongs to the SEDS family
DK885_RS16840	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DK885_RS16845	COG1686	Belongs to the peptidase S11 family
DK885_RS16865	COG0583	DNA-binding transcription factor activity
DK885_RS16880	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DK885_RS16910	COG3069	C4-dicarboxylate transmembrane transporter activity
DK885_RS16915	COG4565	transcriptional regulatory protein
DK885_RS16920	COG3290	protein histidine kinase activity
DK885_RS16925	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DK885_RS16935	COG2301	Belongs to the HpcH HpaI aldolase family
DK885_RS16940	COG3051	citrate lyase alpha subunit
DK885_RS16955	COG0471	metal ion transport
DK885_RS16960	COG3719	Belongs to the RNase T2 family
DK885_RS16970	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DK885_RS16980	COG1063	alcohol dehydrogenase
DK885_RS16985	COG0589	response to stress
DK885_RS16990	COG3634	alkyl hydroperoxide reductase activity
DK885_RS16995	COG0450	alkyl hydroperoxide reductase
DK885_RS17000	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DK885_RS17010	COG0583	DNA-binding transcription factor activity
DK885_RS17015	COG3969	phosphoadenosine phosphosulfate
DK885_RS17020	COG1475	DNA binding
DK885_RS17025	COG0436	Aminotransferase
DK885_RS17030	COG0371	Dehydrogenase
DK885_RS17035	COG2879	small protein
DK885_RS17040	COG1966	Carbon starvation protein
DK885_RS17045	COG2050	protein possibly involved in aromatic compounds catabolism
DK885_RS17050	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS17055	COG3433	isochorismatase activity
DK885_RS17055	COG1535	isochorismatase
DK885_RS17060	COG1021	2,3-dihydroxybenzoate-AMP ligase
DK885_RS17065	COG1169	isochorismate synthase
DK885_RS17075	COG4592	Periplasmic binding protein
DK885_RS17085	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DK885_RS17090	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DK885_RS17095	COG1120	ATPase activity
DK885_RS17100	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DK885_RS17105	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DK885_RS17105	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
DK885_RS17110	COG3251	PFAM MbtH domain protein
DK885_RS17115	COG2382	esterase
DK885_RS17120	COG4771	TonB-dependent receptor
DK885_RS17125	COG2977	Belongs to the P-Pant transferase superfamily
DK885_RS17130	COG3385	transposase activity
DK885_RS17160	COG2315	Protein conserved in bacteria
DK885_RS17165	COG0778	Nitroreductase
DK885_RS17170	COG0668	transmembrane transport
DK885_RS17175	COG1113	amino acid transport
DK885_RS17180	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DK885_RS17185	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK885_RS17190	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK885_RS17195	COG1538	Outer membrane efflux protein
DK885_RS17205	COG0745	RESPONSE REGULATOR receiver
DK885_RS17210	COG5002	protein histidine kinase activity
DK885_RS17215	COG1215	transferase activity, transferring glycosyl groups
DK885_RS17220	COG4783	chaperone-mediated protein folding
DK885_RS17235	COG2207	Transcriptional regulator
DK885_RS17250	COG4571	Outer membrane protease
DK885_RS17255	COG2207	Transcriptional regulator
DK885_RS17265	COG0500	methyltransferase
DK885_RS17280	COG4220	transposase activity
DK885_RS17305	COG5562	phage envelope protein
DK885_RS17320	COG3772	lysozyme
DK885_RS17385	COG2207	Transcriptional regulator
DK885_RS17390	COG1881	PFAM PEBP family protein
DK885_RS17395	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DK885_RS17400	COG2076	Multidrug Resistance protein
DK885_RS17430	COG0582	viral genome integration into host DNA
DK885_RS17440	COG2197	response regulator
DK885_RS17445	COG3539	Fimbrial protein
DK885_RS17450	COG3539	Fimbrial protein
DK885_RS17455	COG3188	usher protein
DK885_RS17460	COG3121	Chaperone
DK885_RS17465	COG3539	Fimbrial protein
DK885_RS17475	COG2501	S4 domain
DK885_RS17480	COG1988	membrane-bound metal-dependent
DK885_RS17490	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DK885_RS17505	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DK885_RS17510	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DK885_RS17515	COG0549	Belongs to the carbamate kinase family
DK885_RS17525	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DK885_RS17530	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DK885_RS17535	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
DK885_RS17540	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DK885_RS17545	COG3257	ureidoglycine aminohydrolase activity
DK885_RS17550	COG1929	Belongs to the glycerate kinase type-1 family
DK885_RS17555	COG2233	PERMEase
DK885_RS17565	COG1953	Uracil, thiamine, allantoin
DK885_RS17570	COG2084	Dehydrogenase
DK885_RS17575	COG3622	Belongs to the hyi family
DK885_RS17580	COG3960	tartronate-semialdehyde synthase activity
DK885_RS17585	COG1414	Transcriptional regulator
DK885_RS17595	COG0583	DNA-binding transcription factor activity
DK885_RS17630	COG3209	COG3209 Rhs family protein
DK885_RS17635	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DK885_RS17640	COG4181	ATPase activity
DK885_RS17645	COG2755	lipolytic protein G-D-S-L family
DK885_RS17650	COG0300	oxidoreductase activity
DK885_RS17655	COG3118	belongs to the thioredoxin family
DK885_RS17660	COG0390	transport system, permease component
DK885_RS17665	COG4619	ABC transporter
DK885_RS17670	COG0330	HflC and HflK could
DK885_RS17675	COG1585	Membrane protein implicated in regulation of membrane protease activity
DK885_RS17680	COG0789	Transcriptional regulator
DK885_RS17685	COG0531	amino acid
DK885_RS17690	COG2066	Belongs to the glutaminase family
DK885_RS17695	COG2217	Heavy metal translocating P-type atpase
DK885_RS17700	COG3093	addiction module antidote protein HigA
DK885_RS17710	COG3735	TraB family
DK885_RS17720	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DK885_RS17725	COG0737	Belongs to the 5'-nucleotidase family
DK885_RS17735	COG2223	nitrite transmembrane transporter activity
DK885_RS17740	COG4651	solute:proton antiporter activity
DK885_RS17740	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DK885_RS17745	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS17785	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DK885_RS17800	COG2832	Protein of unknown function (DUF454)
DK885_RS17805	COG3923	Primosomal replication protein n
DK885_RS17815	COG3264	Mechanosensitive ion channel
DK885_RS17815	COG1196	nuclear chromosome segregation
DK885_RS17825	COG1309	transcriptional regulator
DK885_RS17830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK885_RS17835	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DK885_RS17850	COG0110	maltose O-acetyltransferase activity
DK885_RS17860	COG4943	cyclic-guanylate-specific phosphodiesterase activity
DK885_RS17865	COG5507	3-demethylubiquinone-9 3-methyltransferase
DK885_RS17875	COG3695	enzyme binding
DK885_RS17880	COG3126	Type III secretion system lipoprotein chaperone (YscW)
DK885_RS17885	COG1946	Acyl-CoA thioesterase
DK885_RS17890	COG0004	ammonium transporteR
DK885_RS17895	COG0347	Belongs to the P(II) protein family
DK885_RS17900	COG1132	(ABC) transporter
DK885_RS17905	COG1132	(ABC) transporter
DK885_RS17910	COG1522	sequence-specific DNA binding
DK885_RS17920	COG4533	DNA binding
DK885_RS17930	COG0824	Thioesterase
DK885_RS17935	COG1555	photosystem II stabilization
DK885_RS17940	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DK885_RS17945	COG0776	regulation of translation
DK885_RS17950	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DK885_RS17975	COG0271	Belongs to the BolA IbaG family
DK885_RS17985	COG3056	Lipoprotein
DK885_RS17990	COG2223	nitrite transmembrane transporter activity
DK885_RS17995	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DK885_RS18000	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DK885_RS18005	COG1845	cytochrome c oxidase, subunit III
DK885_RS18010	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DK885_RS18020	COG2814	Major facilitator Superfamily
DK885_RS18030	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DK885_RS18035	COG0693	protein deglycase activity
DK885_RS18050	COG0142	geranyltranstransferase activity
DK885_RS18060	COG0667	Aldo Keto reductase
DK885_RS18065	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DK885_RS18070	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DK885_RS18085	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DK885_RS18085	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DK885_RS18095	COG4238	major outer membrane lipoprotein
DK885_RS18105	COG3248	Nucleoside-binding outer membrane protein
DK885_RS18110	COG1403	HNH endonuclease
DK885_RS18115	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DK885_RS18120	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DK885_RS18125	COG1862	Preprotein translocase
DK885_RS18145	COG0366	Alpha amylase catalytic
DK885_RS18150	COG1113	amino acid transport
DK885_RS18155	COG1114	Component of the transport system for branched-chain amino acids
DK885_RS18160	COG5002	protein histidine kinase activity
DK885_RS18165	COG0745	RESPONSE REGULATOR receiver
DK885_RS18170	COG0420	3'-5' exonuclease activity
DK885_RS18175	COG0419	ATPase involved in DNA repair
DK885_RS18180	COG2814	Major facilitator Superfamily
DK885_RS18185	COG1940	carbohydrate kinase activity
DK885_RS18210	COG4126	flavin adenine dinucleotide binding
DK885_RS18235	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DK885_RS18240	COG3706	GGDEF domain
DK885_RS18250	COG1785	Belongs to the alkaline phosphatase family
DK885_RS18265	COG1181	Belongs to the D-alanine--D-alanine ligase family
DK885_RS18290	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
DK885_RS18300	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DK885_RS18305	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DK885_RS18320	COG3468	outer membrane autotransporter barrel domain protein
DK885_RS18330	COG0113	porphobilinogen synthase activity
DK885_RS18335	COG2175	clavaminate synthase activity
DK885_RS18340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DK885_RS18350	COG4521	taurine ABC transporter
DK885_RS18360	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DK885_RS18365	COG1215	transferase activity, transferring glycosyl groups
DK885_RS18400	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
DK885_RS18410	COG3122	Protein conserved in bacteria
DK885_RS18415	COG2814	Major facilitator Superfamily
DK885_RS18430	COG3971	2-oxopent-4-enoate hydratase activity
DK885_RS18450	COG1414	Transcriptional regulator
DK885_RS18455	COG1609	Transcriptional regulator
DK885_RS18465	COG3250	beta-galactosidase activity
DK885_RS18485	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DK885_RS18520	COG2003	Belongs to the UPF0758 family
DK885_RS18540	COG2378	regulation of single-species biofilm formation
DK885_RS18560	COG3596	GTP binding
DK885_RS18565	COG0583	DNA-binding transcription factor activity
DK885_RS18575	COG2963	transposase activity
DK885_RS18580	COG2826	transposase and inactivated derivatives, IS30 family
DK885_RS18615	COG0833	amino acid
DK885_RS18620	COG2040	homocysteine
DK885_RS18625	COG3842	ATPase activity
DK885_RS18660	COG2801	Transposase and inactivated derivatives
DK885_RS18660	COG3415	Transposase
DK885_RS18665	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DK885_RS18670	COG0129	dihydroxy-acid dehydratase activity
DK885_RS18675	COG2211	Major facilitator Superfamily
DK885_RS18680	COG3507	Belongs to the glycosyl hydrolase 43 family
DK885_RS18685	COG1414	Transcriptional regulator
DK885_RS18690	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DK885_RS18715	COG1061	Type III restriction enzyme res subunit
DK885_RS18725	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DK885_RS18745	COG0582	viral genome integration into host DNA
DK885_RS18755	COG0583	DNA-binding transcription factor activity
DK885_RS18760	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
DK885_RS18765	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DK885_RS18770	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DK885_RS18775	COG2080	2 iron, 2 sulfur cluster binding
DK885_RS18785	COG3477	response to acidic pH
DK885_RS18795	COG0727	PFAM Uncharacterised protein family (UPF0153)
DK885_RS18800	COG3121	Chaperone
DK885_RS18810	COG3188	usher protein
DK885_RS18865	COG1388	LysM domain
DK885_RS18880	COG3059	membrane
DK885_RS18890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DK885_RS18895	COG2207	Transcriptional regulator
DK885_RS18900	COG0247	lactate metabolic process
DK885_RS18935	COG2195	Cleaves the N-terminal amino acid of tripeptides
DK885_RS18940	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DK885_RS18945	COG1690	Belongs to the RtcB family
DK885_RS18955	COG0454	-acetyltransferase
DK885_RS18965	COG2161	toxin-antitoxin pair type II binding
DK885_RS18985	COG1943	Transposase
DK885_RS18990	COG0791	NLP P60 protein
DK885_RS18995	COG3077	Addiction module antitoxin, RelB DinJ family
DK885_RS19000	COG3041	Addiction module toxin RelE StbE family
DK885_RS19005	COG3034	peptidoglycan biosynthetic process
DK885_RS19010	COG0121	glutamine amidotransferase
DK885_RS19020	COG1960	acyl-CoA dehydrogenase activity
DK885_RS19030	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DK885_RS19065	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DK885_RS19075	COG2226	methyltransferase
DK885_RS19085	COG1388	LysM domain
DK885_RS19085	COG0741	lytic transglycosylase activity
DK885_RS19090	COG2226	methyltransferase
DK885_RS19100	COG0583	DNA-binding transcription factor activity
DK885_RS19105	COG0656	L-ascorbic acid biosynthetic process
DK885_RS19140	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DK885_RS19145	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DK885_RS19150	COG2011	ABC-type metal ion transport system permease component
DK885_RS19155	COG1464	Belongs to the NlpA lipoprotein family
DK885_RS19165	COG1720	tRNA m6t6A37 methyltransferase activity
DK885_RS19175	COG0791	NLP P60 protein
DK885_RS19180	COG3015	lipoprotein NlpE involved in copper resistance
DK885_RS19185	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DK885_RS19190	COG4681	YaeQ
DK885_RS19200	COG4568	rho-dependent transcription termination
DK885_RS19205	COG0037	tRNA processing
DK885_RS19210	COG0346	lactoylglutathione lyase activity
DK885_RS19215	COG1982	Orn Lys Arg decarboxylase major
DK885_RS19225	COG0587	DNA-directed DNA polymerase activity
DK885_RS19250	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DK885_RS19255	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
DK885_RS19265	COG0750	zinc metalloprotease
DK885_RS19270	COG0575	Belongs to the CDS family
DK885_RS19275	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DK885_RS19280	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DK885_RS19315	COG0024	Methionine aminopeptidase
DK885_RS19330	COG1408	metallophosphoesterase
DK885_RS19340	COG3835	regulator
DK885_RS19345	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DK885_RS19365	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DK885_RS19370	COG2860	membrane
DK885_RS19390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DK885_RS19395	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DK885_RS19400	COG1120	ATPase activity
DK885_RS19410	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DK885_RS19420	COG1643	Atp-dependent helicase
DK885_RS19425	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DK885_RS19435	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DK885_RS19445	COG0617	tRNA 3'-terminal CCA addition
DK885_RS19450	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DK885_RS19455	COG3539	Fimbrial protein
DK885_RS19460	COG3121	Chaperone
DK885_RS19465	COG3188	usher protein
DK885_RS19470	COG3539	Fimbrial protein
DK885_RS19475	COG3539	Fimbrial protein
DK885_RS19480	COG3539	Fimbrial protein
DK885_RS19485	COG3539	Fimbrial protein
DK885_RS19500	COG5464	transposase or invertase
DK885_RS19520	COG0726	polysaccharide deacetylase
DK885_RS19525	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS19530	COG0842	Transport permease protein
DK885_RS19535	COG1131	(ABC) transporter
DK885_RS19540	COG0288	reversible hydration of carbon dioxide
DK885_RS19545	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DK885_RS19550	COG4993	Dehydrogenase
DK885_RS19555	COG2132	Multicopper oxidase
DK885_RS19580	COG1049	propionate catabolic process, 2-methylcitrate cycle
DK885_RS19590	COG3064	Membrane
DK885_RS19595	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DK885_RS19600	COG0508	dehydrogenase complex catalyzes the overall conversion of
DK885_RS19605	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DK885_RS19615	COG2186	Transcriptional regulator
DK885_RS19620	COG1113	amino acid transport
DK885_RS19625	COG3725	Membrane protein required for beta-lactamase induction
DK885_RS19630	COG3023	N-Acetylmuramoyl-L-alanine amidase
DK885_RS19635	COG0157	Belongs to the NadC ModD family
DK885_RS19645	COG4969	Belongs to the N-Me-Phe pilin family
DK885_RS19650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DK885_RS19655	COG1459	type II secretion system
DK885_RS19665	COG0237	dephospho-CoA kinase activity
DK885_RS19680	COG0494	nUDIX hydrolase
DK885_RS19700	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DK885_RS19705	COG0849	cell division
DK885_RS19710	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DK885_RS19715	COG1181	Belongs to the D-alanine--D-alanine ligase family
DK885_RS19730	COG0772	Belongs to the SEDS family
DK885_RS19735	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DK885_RS19745	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DK885_RS19750	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DK885_RS19755	COG0768	penicillin binding
DK885_RS19760	COG3116	cell division
DK885_RS19770	COG2001	Belongs to the MraZ family
DK885_RS19780	COG1609	Transcriptional regulator
DK885_RS19790	COG0440	acetolactate synthase activity
DK885_RS19795	COG0028	Belongs to the TPP enzyme family
DK885_RS19800	COG0583	DNA-binding transcription factor activity
DK885_RS19815	COG0473	3-isopropylmalate dehydrogenase activity
DK885_RS19830	COG2814	Major facilitator Superfamily
DK885_RS19840	COG4533	DNA binding
DK885_RS19845	COG4143	(ABC) transporter
DK885_RS19850	COG1178	ABC-type Fe3 transport system permease component
DK885_RS19855	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
DK885_RS19860	COG0586	Pfam SNARE associated Golgi protein
DK885_RS19865	COG4977	sequence-specific DNA binding
DK885_RS19875	COG1069	ribulokinase activity
DK885_RS19880	COG2160	L-arabinose isomerase activity
DK885_RS19885	COG0235	Class ii aldolase
DK885_RS19890	COG0417	DNA replication proofreading
DK885_RS19900	COG0564	pseudouridine synthase activity
DK885_RS19910	COG1357	PFAM Pentapeptide repeats (8 copies)
DK885_RS19915	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DK885_RS19920	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DK885_RS19925	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DK885_RS19950	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DK885_RS19965	COG2271	Major facilitator Superfamily
DK885_RS19970	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
DK885_RS19975	COG0644	oxidoreductase
DK885_RS20030	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DK885_RS20035	COG0505	Belongs to the CarA family
DK885_RS20055	COG1047	Peptidyl-prolyl cis-trans
DK885_RS20070	COG0196	riboflavin kinase activity
DK885_RS20095	COG0583	DNA-binding transcription factor activity
DK885_RS20100	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DK885_RS20110	COG3385	transposase activity
DK885_RS20130	COG4735	regulation of single-species biofilm formation
DK885_RS20135	COG1584	GPR1 FUN34 yaaH family protein
DK885_RS20140	COG0521	Mo-molybdopterin cofactor biosynthetic process
DK885_RS20145	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DK885_RS20150	COG1115	amino acid carrier protein
DK885_RS20165	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DK885_RS20175	COG0460	homoserine dehydrogenase
DK885_RS20175	COG0527	aspartate kinase activity
DK885_RS20185	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
DK885_RS20195	COG0745	RESPONSE REGULATOR receiver
DK885_RS20200	COG4452	Inner membrane protein CreD
DK885_RS20205	COG2205	protein histidine kinase activity
DK885_RS20210	COG0745	RESPONSE REGULATOR receiver
DK885_RS20215	COG3045	CreA protein
DK885_RS20220	COG3708	Transcriptional regulator
DK885_RS20220	COG2207	Transcriptional regulator
DK885_RS20240	COG0741	lytic transglycosylase activity
DK885_RS20250	COG0488	(ABC) transporter
DK885_RS20255	COG3172	ATPase kinase involved in NAD metabolism
DK885_RS20255	COG1056	cytidyltransferase-related domain
DK885_RS20260	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DK885_RS20265	COG0560	Phosphoserine phosphatase
DK885_RS20270	COG3726	membrane protein affecting hemolysin expression
DK885_RS20280	COG3550	peptidyl-serine autophosphorylation
DK885_RS20305	COG1328	CTP reductase activity
DK885_RS20310	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DK885_RS20315	COG0084	hydrolase, TatD family'
DK885_RS20320	COG4667	esterase of the alpha-beta hydrolase superfamily
DK885_RS20330	COG2823	Periplasmic or secreted lipoprotein
DK885_RS20340	COG1011	Hydrolase
DK885_RS20345	COG0456	acetyltransferase
DK885_RS20350	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
DK885_RS20380	COG4114	ferric iron reductase
DK885_RS20385	COG2197	response regulator
DK885_RS20390	COG2197	response regulator
DK885_RS20395	COG2966	Psort location CytoplasmicMembrane, score
DK885_RS20410	COG1484	DNA-dependent DNA replication
DK885_RS20425	COG1063	alcohol dehydrogenase
DK885_RS20430	COG1802	Transcriptional regulator
DK885_RS20435	COG2271	Major facilitator Superfamily
DK885_RS20440	COG0840	transmembrane signaling receptor activity
DK885_RS20450	COG1966	Carbon starvation protein
DK885_RS20455	COG2879	small protein
DK885_RS20460	COG0523	cobalamin synthesis protein
DK885_RS20465	COG1715	Restriction endonuclease
DK885_RS20470	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
DK885_RS20475	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
DK885_RS20480	COG0732	type I restriction modification DNA specificity domain
DK885_RS20490	COG1401	restriction endodeoxyribonuclease activity
DK885_RS20495	COG4268	DNA restriction-modification system
DK885_RS20505	COG1196	nuclear chromosome segregation
DK885_RS20515	COG5457	Domain of unknown function (DUF1127)
DK885_RS20520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DK885_RS20530	COG2814	Major facilitator Superfamily
DK885_RS20535	COG2733	membrane
DK885_RS20540	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
DK885_RS20545	COG1924	4 iron, 4 sulfur cluster binding
DK885_RS20555	COG3204	pilus organization
DK885_RS20560	COG0477	Major facilitator Superfamily
DK885_RS20575	COG3366	ferrous iron transmembrane transporter activity
DK885_RS20580	COG0700	Nucleoside recognition
DK885_RS20585	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DK885_RS20590	COG0583	DNA-binding transcription factor activity
DK885_RS20610	COG2186	Transcriptional regulator
DK885_RS20620	COG0246	Mannitol dehydrogenase
DK885_RS20635	COG2610	gluconate transmembrane transporter activity
DK885_RS20640	COG3539	Fimbrial protein
DK885_RS20645	COG3539	Fimbrial protein
DK885_RS20650	COG3539	Fimbrial protein
DK885_RS20655	COG3188	usher protein
DK885_RS20660	COG3121	Chaperone
DK885_RS20665	COG3539	Fimbrial protein
DK885_RS20670	COG3539	Fimbrial protein
DK885_RS20680	COG4974	Belongs to the 'phage' integrase family
DK885_RS20695	COG0582	viral genome integration into host DNA
DK885_RS20710	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DK885_RS20715	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
DK885_RS20725	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
DK885_RS20725	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DK885_RS20750	COG3153	acetyltransferase
DK885_RS20755	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DK885_RS20765	COG1363	Peptidase, m42
DK885_RS20770	COG3414	Phosphotransferase system galactitol-specific IIB component
DK885_RS20775	COG3775	system Galactitol-specific IIC component
DK885_RS20780	COG0434	BtpA family
DK885_RS20785	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS20790	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DK885_RS20795	COG1349	DNA-binding transcription factor activity
DK885_RS20800	COG1414	Transcriptional regulator
DK885_RS20805	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DK885_RS20810	COG0129	dihydroxy-acid dehydratase activity
DK885_RS20815	COG2610	gluconate transmembrane transporter activity
DK885_RS20825	COG2390	Transcriptional regulator
DK885_RS20840	COG1595	DNA-templated transcription, initiation
DK885_RS20845	COG3712	iron ion homeostasis
DK885_RS20850	COG4772	TonB-dependent receptor
DK885_RS20855	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DK885_RS20860	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DK885_RS20865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DK885_RS20870	COG1120	ATPase activity
DK885_RS20875	COG2085	NADP oxidoreductase coenzyme F420-dependent
DK885_RS20890	COG2826	transposase and inactivated derivatives, IS30 family
DK885_RS20920	COG0673	inositol 2-dehydrogenase activity
DK885_RS20925	COG2814	Major facilitator Superfamily
DK885_RS20930	COG3385	transposase activity
DK885_RS20970	COG0582	viral genome integration into host DNA
DK885_RS20985	COG1064	alcohol dehydrogenase
DK885_RS20990	COG3265	gluconokinase activity
DK885_RS20995	COG1063	alcohol dehydrogenase
DK885_RS21000	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS21005	COG2610	gluconate transmembrane transporter activity
DK885_RS21010	COG1609	Transcriptional regulator
DK885_RS21015	COG0433	COG0433 Predicted ATPase
DK885_RS21020	COG0795	lipopolysaccharide-transporting ATPase activity
DK885_RS21025	COG0795	lipopolysaccharide-transporting ATPase activity
DK885_RS21035	COG2927	DNA polymerase III (CHI subunit)
DK885_RS21040	COG0525	valine-tRNA ligase activity
DK885_RS21045	COG4269	membrane
DK885_RS21050	COG0456	acetyltransferase
DK885_RS21055	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
DK885_RS21060	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DK885_RS21070	COG2731	YhcH YjgK YiaL family protein
DK885_RS21075	COG1309	transcriptional regulator
DK885_RS21080	COG1028	Short-chain dehydrogenase reductase Sdr
DK885_RS21085	COG0251	oxidation-reduction process
DK885_RS21110	COG0251	oxidation-reduction process
DK885_RS21115	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DK885_RS21125	COG1609	Transcriptional regulator
DK885_RS21130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK885_RS21130	COG1263	PTS System
DK885_RS21135	COG0366	Alpha amylase catalytic
DK885_RS21140	COG1328	CTP reductase activity
DK885_RS21145	COG0602	queuosine metabolic process
DK885_RS21150	COG3783	Cytochrome b(562)
DK885_RS21155	COG0312	modulator of DNA gyrase
DK885_RS21165	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DK885_RS21175	COG1172	Belongs to the binding-protein-dependent transport system permease family
DK885_RS21180	COG1172	Belongs to the binding-protein-dependent transport system permease family
DK885_RS21185	COG1129	ABC transporter
DK885_RS21190	COG1879	ABC-type sugar transport system periplasmic component
DK885_RS21195	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DK885_RS21200	COG2337	Toxic component of a toxin-antitoxin (TA) module
DK885_RS21205	COG2336	PFAM SpoVT AbrB
DK885_RS21210	COG2105	PFAM AIG2 family protein
DK885_RS21215	COG2911	Protein conserved in bacteria
DK885_RS21220	COG0729	surface antigen
DK885_RS21235	COG1253	flavin adenine dinucleotide binding
DK885_RS21245	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DK885_RS21260	COG1218	3'(2'),5'-bisphosphate nucleotidase
DK885_RS21265	COG0737	Belongs to the 5'-nucleotidase family
DK885_RS21270	COG1733	regulation of RNA biosynthetic process
DK885_RS21275	COG0702	epimerase
DK885_RS21280	COG0697	spore germination
DK885_RS21290	COG1113	amino acid transport
DK885_RS21295	COG0545	Peptidyl-prolyl cis-trans isomerase
DK885_RS21305	COG3061	Opacity-associated protein A
DK885_RS21310	COG1309	transcriptional regulator
DK885_RS21330	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DK885_RS21365	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS21370	COG3414	Phosphotransferase system galactitol-specific IIB component
DK885_RS21375	COG3037	sugar-specific permease SgaT UlaA
DK885_RS21390	COG1073	alpha beta
DK885_RS21395	COG3650	response to hydrogen peroxide
DK885_RS21410	COG1960	acyl-CoA dehydrogenase activity
DK885_RS21415	COG0754	glutathionylspermidine amidase activity
DK885_RS21420	COG5463	Belongs to the UPF0441 family
DK885_RS21425	COG3766	membrane
DK885_RS21435	COG1842	Phage shock protein A
DK885_RS21440	COG3789	protein conserved in bacteria
DK885_RS21450	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DK885_RS21455	COG0557	exoribonuclease II activity
DK885_RS21470	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DK885_RS21475	COG0330	HflC and HflK could
DK885_RS21480	COG0330	HflC and HflK could
DK885_RS21485	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DK885_RS21505	COG0860	N-Acetylmuramoyl-L-alanine amidase
DK885_RS21510	COG0802	atpase or kinase
DK885_RS21515	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DK885_RS21515	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DK885_RS21520	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DK885_RS21560	COG1511	domain protein
DK885_RS21560	COG3264	Mechanosensitive ion channel
DK885_RS21575	COG0531	amino acid
DK885_RS21585	COG1053	succinate dehydrogenase
DK885_RS21590	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DK885_RS21605	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DK885_RS21610	COG3040	lipid binding
DK885_RS21615	COG2076	Multidrug Resistance protein
DK885_RS21620	COG5510	response to toxic substance
DK885_RS21625	COG5510	response to toxic substance
DK885_RS21635	COG1509	lysine 2,3-aminomutase activity
DK885_RS21660	COG0531	amino acid
DK885_RS21665	COG3030	protein affecting phage T7 exclusion by the F plasmid
DK885_RS21670	COG1027	Aspartate ammonia-lyase
DK885_RS21675	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DK885_RS21685	COG4232	protein-disulfide reductase activity
DK885_RS21690	COG1309	transcriptional regulator
DK885_RS21705	COG3710	Transcriptional regulator
DK885_RS21710	COG0531	amino acid
DK885_RS21715	COG1982	Orn Lys Arg decarboxylase major
DK885_RS21720	COG3104	oligopeptide transport
DK885_RS21725	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DK885_RS21745	COG2388	GCN5-related N-acetyl-transferase
DK885_RS21750	COG3592	Divergent 4Fe-4S mono-cluster
DK885_RS21755	COG3290	protein histidine kinase activity
DK885_RS21760	COG4565	transcriptional regulatory protein
DK885_RS21770	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DK885_RS21775	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DK885_RS21775	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DK885_RS21780	COG3647	Membrane
DK885_RS21785	COG2211	Major facilitator Superfamily
DK885_RS21790	COG1486	melibiose metabolic process
DK885_RS21795	COG2169	Transcriptional regulator
DK885_RS21800	COG1982	Orn Lys Arg decarboxylase major
DK885_RS21805	COG2207	Transcriptional regulator
DK885_RS21810	COG0531	amino acid
DK885_RS21815	COG2194	sulfuric ester hydrolase activity
DK885_RS21820	COG0745	RESPONSE REGULATOR receiver
DK885_RS21825	COG0642	Histidine kinase
DK885_RS21835	COG0477	Major facilitator Superfamily
DK885_RS21845	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DK885_RS21855	COG2824	Alkylphosphonate utilization operon protein PhnA
DK885_RS21860	COG2764	glyoxalase bleomycin resistance protein dioxygenase
DK885_RS21865	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DK885_RS21870	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DK885_RS21880	COG2188	Transcriptional regulator
DK885_RS21885	COG3624	Phosphonate C-P lyase system protein PhnG
DK885_RS21890	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
DK885_RS21895	COG3626	phosphonate metabolism
DK885_RS21900	COG3627	carbon phosphorus lyase activity
DK885_RS21905	COG4107	phosphonate C-P lyase system protein PhnK
DK885_RS21910	COG4778	phosphonate C-P lyase system protein PhnL
DK885_RS21915	COG3454	Phosphonate metabolism
DK885_RS21920	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
DK885_RS21925	COG0456	acetyltransferase
DK885_RS21930	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DK885_RS21940	COG0698	ribose 5-phosphate isomerase
DK885_RS21950	COG1737	Transcriptional regulator
DK885_RS21955	COG1879	ABC-type sugar transport system periplasmic component
DK885_RS21960	COG1129	ABC transporter
DK885_RS21965	COG1172	Belongs to the binding-protein-dependent transport system permease family
DK885_RS21970	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DK885_RS21975	COG1940	carbohydrate kinase activity
DK885_RS21980	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DK885_RS21990	COG1566	PFAM secretion protein HlyD family protein
DK885_RS21995	COG1289	transmembrane transporter activity
DK885_RS22000	COG1538	Outer membrane efflux protein
DK885_RS22010	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DK885_RS22015	COG1301	dicarboxylic acid transport
DK885_RS22025	COG4235	cytochrome complex assembly
DK885_RS22030	COG3088	subunit of a heme lyase
DK885_RS22035	COG1138	Cytochrome C-type biogenesis protein
DK885_RS22040	COG3301	Polysulphide reductase, NrfD
DK885_RS22045	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS22050	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
DK885_RS22065	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DK885_RS22070	COG3162	membrane
DK885_RS22080	COG1357	PFAM Pentapeptide repeats (8 copies)
DK885_RS22085	COG0025	NhaP-type Na H and K H
DK885_RS22090	COG2252	PERMEase
DK885_RS22110	COG0789	Transcriptional regulator
DK885_RS22115	COG2207	Transcriptional regulator
DK885_RS22120	COG4943	cyclic-guanylate-specific phosphodiesterase activity
DK885_RS22135	COG0629	single-stranded DNA binding
DK885_RS22140	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DK885_RS22145	COG2315	Protein conserved in bacteria
DK885_RS22150	COG0432	Pfam Uncharacterised protein family UPF0047
DK885_RS22155	COG3700	Belongs to the class B bacterial acid phosphatase family
DK885_RS22165	COG1448	Aminotransferase
DK885_RS22170	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DK885_RS22175	COG0305	Participates in initiation and elongation during chromosome replication
DK885_RS22180	COG0604	alcohol dehydrogenase
DK885_RS22190	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DK885_RS22205	COG0735	belongs to the Fur family
DK885_RS22210	COG3237	CsbD-like
DK885_RS22215	COG0534	Mate efflux family protein
DK885_RS22225	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DK885_RS22265	COG3842	ATPase activity
DK885_RS22275	COG2182	Extracellular solute-binding protein
DK885_RS22280	COG1175	transmembrane transport
DK885_RS22285	COG3833	ABC-type maltose transport systems, permease component
DK885_RS22290	COG2814	Major facilitator Superfamily
DK885_RS22290	COG0477	Major facilitator Superfamily
DK885_RS22305	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DK885_RS22335	COG0527	aspartate kinase activity
DK885_RS22345	COG1187	pseudouridine synthase activity
DK885_RS22355	COG1283	sodium-dependent phosphate transmembrane transporter activity
DK885_RS22360	COG0646	methionine synthase
DK885_RS22360	COG1410	methionine synthase
DK885_RS22365	COG1414	Transcriptional regulator
DK885_RS22380	COG2224	Isocitrate lyase
DK885_RS22385	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DK885_RS22395	COG0456	acetyltransferase
DK885_RS22435	COG0151	Belongs to the GarS family
DK885_RS22440	COG2204	response regulator
DK885_RS22445	COG4191	Histidine kinase
DK885_RS22455	COG3678	ATP-independent chaperone mediated protein folding
DK885_RS22470	COG3068	Protein conserved in bacteria
DK885_RS22505	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DK885_RS22510	COG2104	thiamine diphosphate biosynthetic process
DK885_RS22520	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DK885_RS22565	COG0250	Participates in transcription elongation, termination and antitermination
DK885_RS22570	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DK885_RS22615	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DK885_RS22615	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DK885_RS22620	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DK885_RS22650	COG4206	TonB-dependent receptor
DK885_RS22680	COG0583	DNA-binding transcription factor activity
DK885_RS22695	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DK885_RS22715	COG2194	sulfuric ester hydrolase activity
DK885_RS22720	COG2207	Transcriptional regulator
DK885_RS22725	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS22730	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DK885_RS22735	COG1882	Formate acetyltransferase
DK885_RS22740	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS22745	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS22750	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS22750	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DK885_RS22750	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS22755	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DK885_RS22760	COG0371	Dehydrogenase
DK885_RS22765	COG3738	Protein conserved in bacteria
DK885_RS22770	COG0697	spore germination
DK885_RS22780	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DK885_RS22785	COG0460	homoserine dehydrogenase
DK885_RS22785	COG0527	aspartate kinase activity
DK885_RS22790	COG0626	cystathionine gamma-synthase activity
DK885_RS22800	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
DK885_RS22810	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DK885_RS22815	COG1609	Transcriptional regulator
DK885_RS22820	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DK885_RS22835	COG1575	Belongs to the MenA family. Type 1 subfamily
DK885_RS22850	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DK885_RS22860	COG1494	fructose-1,6-bisphosphatase
DK885_RS22865	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DK885_RS22870	COG0589	response to stress
DK885_RS22875	COG3691	Protein conserved in bacteria
DK885_RS22880	COG3152	Membrane
DK885_RS22900	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DK885_RS22915	COG3678	ATP-independent chaperone mediated protein folding
DK885_RS22920	COG0745	RESPONSE REGULATOR receiver
DK885_RS22925	COG2205	protein histidine kinase activity
DK885_RS22930	COG2258	MOSC domain
DK885_RS22945	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DK885_RS22985	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS22990	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS22990	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK885_RS22995	COG1363	Peptidase, m42
DK885_RS23000	COG3711	transcriptional antiterminator
DK885_RS23000	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK885_RS23020	COG3383	formate dehydrogenase (NAD+) activity
DK885_RS23020	COG0243	molybdopterin cofactor binding
DK885_RS23025	COG0243	molybdopterin cofactor binding
DK885_RS23025	COG3383	formate dehydrogenase (NAD+) activity
DK885_RS23030	COG0437	4 iron, 4 sulfur cluster binding
DK885_RS23035	COG2864	formate dehydrogenase
DK885_RS23045	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DK885_RS23050	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DK885_RS23055	COG0456	acetyltransferase
DK885_RS23070	COG1011	Hydrolase
DK885_RS23075	COG1349	DNA-binding transcription factor activity
DK885_RS23080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS23085	COG2084	Dehydrogenase
DK885_RS23090	COG3684	Belongs to the aldolase LacD family
DK885_RS23095	COG2942	2-epimerase
DK885_RS23100	COG2017	converts alpha-aldose to the beta-anomer
DK885_RS23105	COG1501	Belongs to the glycosyl hydrolase 31 family
DK885_RS23110	COG2211	Major facilitator Superfamily
DK885_RS23115	COG2211	Major facilitator Superfamily
DK885_RS23120	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DK885_RS23125	COG2271	Major facilitator Superfamily
DK885_RS23130	COG1082	Xylose isomerase domain protein TIM barrel
DK885_RS23135	COG2188	Transcriptional regulator
DK885_RS23140	COG1217	gtp-binding protein TYPA
DK885_RS23150	COG0174	glutamine synthetase
DK885_RS23155	COG3852	Histidine kinase
DK885_RS23160	COG2204	response regulator
DK885_RS23170	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DK885_RS23185	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DK885_RS23185	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DK885_RS23195	COG0204	Acyl-transferase
DK885_RS23200	COG5339	Protein conserved in bacteria
DK885_RS23205	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DK885_RS23210	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DK885_RS23215	COG3084	Protein conserved in bacteria
DK885_RS23220	COG0746	molybdenum cofactor guanylyltransferase activity
DK885_RS23225	COG1763	Mo-molybdopterin cofactor biosynthetic process
DK885_RS23255	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
DK885_RS23260	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DK885_RS23265	COG1739	Uncharacterized protein family UPF0029
DK885_RS23280	COG0183	Belongs to the thiolase family
DK885_RS23285	COG0543	2 iron, 2 sulfur cluster binding
DK885_RS23290	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DK885_RS23295	COG0250	Participates in transcription elongation, termination and antitermination
DK885_RS23300	COG0084	hydrolase, TatD family'
DK885_RS23305	COG0805	protein transport
DK885_RS23310	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DK885_RS23315	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DK885_RS23325	COG3165	ubiquinone biosynthetic process from chorismate
DK885_RS23335	COG1322	Protein conserved in bacteria
DK885_RS23340	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
DK885_RS23345	COG0412	Dienelactone hydrolase
DK885_RS23355	COG0583	DNA-binding transcription factor activity
DK885_RS23360	COG0697	spore germination
DK885_RS23365	COG0561	phosphatase activity
DK885_RS23370	COG2267	carboxylic ester hydrolase activity
DK885_RS23375	COG1280	lysine exporter protein (LysE YggA)
DK885_RS23380	COG1280	lysine exporter protein (LysE YggA)
DK885_RS23385	COG0514	ATP-dependent DNA helicase (RecQ)
DK885_RS23390	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
DK885_RS23395	COG2050	protein possibly involved in aromatic compounds catabolism
DK885_RS23400	COG2962	Rard protein
DK885_RS23415	COG0598	Magnesium transport protein CorA
DK885_RS23420	COG3698	Phosphodiester glycosidase
DK885_RS23425	COG0210	DNA helicase
DK885_RS23430	COG1011	Hydrolase
DK885_RS23440	COG3159	Protein conserved in bacteria
DK885_RS23450	COG5567	small periplasmic lipoprotein
DK885_RS23460	COG3072	Adenylate cyclase
DK885_RS23475	COG1587	Uroporphyrinogen-III synthase
DK885_RS23480	COG2959	enzyme of heme biosynthesis
DK885_RS23485	COG3071	HemY protein
DK885_RS23490	COG3119	arylsulfatase activity
DK885_RS23495	COG0641	radical SAM
DK885_RS23520	COG1113	amino acid transport
DK885_RS23540	COG2244	polysaccharide biosynthetic process
DK885_RS23545	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DK885_RS23550	COG0456	acetyltransferase
DK885_RS23555	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DK885_RS23560	COG1088	dTDP-glucose 4,6-dehydratase activity
DK885_RS23565	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DK885_RS23570	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DK885_RS23575	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DK885_RS23580	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DK885_RS23590	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DK885_RS23600	COG3118	belongs to the thioredoxin family
DK885_RS23620	COG0210	DNA helicase
DK885_RS23630	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DK885_RS23640	COG0583	DNA-binding transcription factor activity
DK885_RS23645	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DK885_RS23655	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DK885_RS23660	COG3978	acetolactate synthase activity
DK885_RS23685	COG0606	chelatase, subunit chli
DK885_RS23690	COG3085	chromosome segregation
DK885_RS23730	COG2186	Transcriptional regulator
DK885_RS23735	COG0477	Major facilitator Superfamily
DK885_RS23740	COG1609	Transcriptional regulator
DK885_RS23745	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DK885_RS23750	COG1879	ABC-type sugar transport system periplasmic component
DK885_RS23755	COG1172	Belongs to the binding-protein-dependent transport system permease family
DK885_RS23760	COG1129	ABC transporter
DK885_RS23790	COG1522	sequence-specific DNA binding
DK885_RS23795	COG0716	FMN binding