C_RS00010 SM01321 C_RS00010 C_RS00055 SM00852 Probable molybdopterin binding domain C_RS00085 SM00271 DnaJ molecular chaperone homology domain C_RS00130 SM00904 Riboflavin kinase C_RS00185 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C_RS00190 SM00851 MGS-like domain C_RS00190 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C_RS00235 SM00893 Electron transfer flavoprotein domain C_RS00295 SM00650 Ribosomal RNA adenine dimethylases C_RS00315 SM00271 DnaJ molecular chaperone homology domain C_RS00325 SM00487 DEAD-like helicases superfamily C_RS00325 SM00490 helicase superfamily c-terminal domain C_RS00330 SM00486 DNA polymerase type-B family C_RS00335 SM01321 C_RS00335 C_RS00340 SM01007 Class II Aldolase and Adducin N-terminal domain C_RS00355 SM00342 helix_turn_helix, arabinose operon control protein C_RS00375 SM00382 ATPases associated with a variety of cellular activities C_RS00400 SM01321 C_RS00400 C_RS00415 SM01329 C_RS00415 C_RS00420 SM00917 LeuA allosteric (dimerisation) domain C_RS00450 SM00354 helix_turn _helix lactose operon repressor C_RS00520 SM00842 Cell division protein FtsA C_RS00525 SM00864 Tubulin/FtsZ family, GTPase domain C_RS00525 SM00865 Tubulin/FtsZ family, C-terminal domain C_RS00540 SM00957 SecA DEAD-like domain C_RS00540 SM00958 SecA preprotein cross-linking domain C_RS00580 SM01240 C_RS00580 C_RS00610 SM00644 C_RS00610 C_RS00665 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS00665 SM00895 C_RS00665 C_RS00720 SM00564 beta-propeller repeat C_RS00730 SM00947 Carbonic anhydrase C_RS00735 SM00382 ATPases associated with a variety of cellular activities C_RS00845 SM00487 DEAD-like helicases superfamily C_RS00845 SM00490 helicase superfamily c-terminal domain C_RS00845 SM00847 Helicase associated domain (HA2) Add an annotation C_RS00860 SM00382 ATPases associated with a variety of cellular activities C_RS00905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C_RS00910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C_RS00915 SM01321 C_RS00915 C_RS00935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C_RS00980 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C_RS00990 SM00935 Outer membrane protein (OmpH-like) C_RS01020 SM00481 DNA polymerase alpha chain like domain C_RS01040 SM00977 TilS substrate C-terminal domain C_RS01055 SM01322 C_RS01055 C_RS01110 SM00382 ATPases associated with a variety of cellular activities C_RS01110 SM00930 C_RS01110 C_RS01170 SM00257 Lysin motif C_RS01175 SM00849 Metallo-beta-lactamase superfamily C_RS01190 SM00479 C_RS01190 C_RS01265 SM00382 ATPases associated with a variety of cellular activities C_RS01395 SM00382 ATPases associated with a variety of cellular activities C_RS01490 SM00710 Parallel beta-helix repeats C_RS01525 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS01525 SM01134 C_RS01525 C_RS01565 SM00354 helix_turn _helix lactose operon repressor C_RS01580 SM00710 Parallel beta-helix repeats C_RS01580 SM00912 haemagglutination activity domain C_RS01620 SM00869 Autotransporter beta-domain C_RS01655 SM00382 ATPases associated with a variety of cellular activities C_RS01675 SM00421 helix_turn_helix, Lux Regulon C_RS01785 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C_RS01805 SM00347 helix_turn_helix multiple antibiotic resistance protein C_RS01810 SM00869 Autotransporter beta-domain C_RS01865 SM00421 helix_turn_helix, Lux Regulon C_RS01915 SM00634 Bacterial Ig-like domain (group 1) C_RS01920 SM00342 helix_turn_helix, arabinose operon control protein C_RS01920 SM00871 Bacterial transcription activator, effector binding domain C_RS01945 SM00342 helix_turn_helix, arabinose operon control protein C_RS01975 SM00869 Autotransporter beta-domain C_RS01985 SM00421 helix_turn_helix, Lux Regulon C_RS02025 SM00052 Putative diguanylate phosphodiesterase C_RS02025 SM00421 helix_turn_helix, Lux Regulon C_RS02040 SM00248 ankyrin repeats C_RS02075 SM00829 Enoylreductase C_RS02095 SM00382 ATPases associated with a variety of cellular activities C_RS02130 SM01266 C_RS02130 C_RS02140 SM01038 Beta galactosidase small chain C_RS02160 SM00829 Enoylreductase C_RS02190 SM00062 Bacterial periplasmic substrate-binding proteins C_RS02195 SM00382 ATPases associated with a variety of cellular activities C_RS02210 SM01004 Delta-aminolevulinic acid dehydratase C_RS02215 SM00869 Autotransporter beta-domain C_RS02265 SM00098 Alkaline phosphatase homologues C_RS02275 SM00267 diguanylate cyclase C_RS02345 SM00448 cheY-homologous receiver domain C_RS02345 SM00862 Transcriptional regulatory protein, C terminal C_RS02350 SM00091 PAS domain C_RS02350 SM00387 Histidine kinase-like ATPases C_RS02350 SM00388 His Kinase A (phosphoacceptor) domain C_RS02365 SM00642 Alpha-amylase domain C_RS02385 SM01323 C_RS02385 C_RS02400 SM00507 HNH nucleases C_RS02450 SM00861 Transketolase, pyrimidine binding domain C_RS02465 SM00981 C_RS02465 C_RS02545 SM00382 ATPases associated with a variety of cellular activities C_RS02545 SM00994 ClpX C4-type zinc finger C_RS02545 SM01086 C-terminal, D2-small domain, of ClpB protein C_RS02550 SM00382 ATPases associated with a variety of cellular activities C_RS02550 SM00464 Found in ATP-dependent protease La (LON) C_RS02555 SM00411 bacterial (prokaryotic) histone like domain C_RS02565 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C_RS02590 SM01321 C_RS02590 C_RS02595 SM00344 helix_turn_helix ASNC type C_RS02600 SM00382 ATPases associated with a variety of cellular activities C_RS02605 SM00382 ATPases associated with a variety of cellular activities C_RS02610 SM00938 Nitrogen regulatory protein P-II C_RS02640 SM00052 Putative diguanylate phosphodiesterase C_RS02650 SM01266 C_RS02650 C_RS02710 SM00382 ATPases associated with a variety of cellular activities C_RS02720 SM00493 C_RS02720 C_RS02725 SM00387 Histidine kinase-like ATPases C_RS02775 SM00530 Helix-turn-helix XRE-family like proteins C_RS02795 SM00422 helix_turn_helix, mercury resistance C_RS02810 SM00244 prohibitin homologues C_RS02815 SM00382 ATPases associated with a variety of cellular activities C_RS02830 SM00822 C_RS02830 C_RS02840 SM00382 ATPases associated with a variety of cellular activities C_RS02865 SM00346 helix_turn_helix isocitrate lyase regulation C_RS02945 SM01001 AIR carboxylase C_RS02965 SM00840 C_RS02965 C_RS03025 SM00028 Tetratricopeptide repeats C_RS03035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS03035 SM00387 Histidine kinase-like ATPases C_RS03035 SM00388 His Kinase A (phosphoacceptor) domain C_RS03040 SM00448 cheY-homologous receiver domain C_RS03040 SM00862 Transcriptional regulatory protein, C terminal C_RS03130 SM00923 MbtH-like protein C_RS03135 SM00823 Phosphopantetheine attachment site C_RS03135 SM00824 Thioesterase C_RS03145 SM00382 ATPases associated with a variety of cellular activities C_RS03185 SM00822 C_RS03185 C_RS03215 SM00470 ParB-like nuclease domain C_RS03290 SM00764 Citrate lyase ligase C-terminal domain C_RS03295 SM00091 PAS domain C_RS03295 SM00387 Histidine kinase-like ATPases C_RS03300 SM00448 cheY-homologous receiver domain C_RS03315 SM00357 Cold shock protein domain C_RS03335 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS03360 SM00936 Penicillin-binding protein 5, C-terminal domain C_RS03390 SM00855 Phosphoglycerate mutase family C_RS03425 SM00382 ATPases associated with a variety of cellular activities C_RS03440 SM00062 Bacterial periplasmic substrate-binding proteins C_RS03455 SM00116 Domain in cystathionine beta-synthase and other proteins. C_RS03455 SM01091 Transporter associated domain C_RS03470 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS03565 SM01130 C_RS03565 C_RS03585 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS03585 SM01134 C_RS03585 C_RS03595 SM01321 C_RS03595 C_RS03665 SM00448 cheY-homologous receiver domain C_RS03665 SM00862 Transcriptional regulatory protein, C terminal C_RS03670 SM00387 Histidine kinase-like ATPases C_RS03670 SM00388 His Kinase A (phosphoacceptor) domain C_RS03720 SM00796 Allophanate hydrolase subunit 1 C_RS03725 SM00797 Allophanate hydrolase subunit 2 C_RS03735 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C_RS03735 SM01232 C_RS03735 C_RS03785 SM00861 Transketolase, pyrimidine binding domain C_RS03800 SM00881 CoA binding domain C_RS03805 SM00028 Tetratricopeptide repeats C_RS03935 SM00855 Phosphoglycerate mutase family C_RS03960 SM00382 ATPases associated with a variety of cellular activities C_RS03990 SM00382 ATPases associated with a variety of cellular activities C_RS04045 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS04045 SM00876 Biotin and Thiamin Synthesis associated domain C_RS04065 SM00487 DEAD-like helicases superfamily C_RS04065 SM00490 helicase superfamily c-terminal domain C_RS04080 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS04085 SM00852 Probable molybdopterin binding domain C_RS04120 SM00155 Phospholipase D. Active site motifs. C_RS04145 SM00382 ATPases associated with a variety of cellular activities C_RS04160 SM00487 DEAD-like helicases superfamily C_RS04160 SM00490 helicase superfamily c-terminal domain C_RS04170 SM00487 DEAD-like helicases superfamily C_RS04170 SM00488 C_RS04170 C_RS04170 SM00491 C_RS04170 C_RS04195 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C_RS04220 SM00382 ATPases associated with a variety of cellular activities C_RS04230 SM00062 Bacterial periplasmic substrate-binding proteins C_RS04230 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C_RS04265 SM00529 Helix-turn-helix diphteria tox regulatory element C_RS04280 SM00382 ATPases associated with a variety of cellular activities C_RS04310 SM00852 Probable molybdopterin binding domain C_RS04320 SM00382 ATPases associated with a variety of cellular activities C_RS04340 SM00052 Putative diguanylate phosphodiesterase C_RS04345 SM00267 diguanylate cyclase C_RS04350 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS04370 SM00936 Penicillin-binding protein 5, C-terminal domain C_RS04375 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS04375 SM01134 C_RS04375 C_RS04380 SM00014 Acid phosphatase homologues C_RS04675 SM00382 ATPases associated with a variety of cellular activities C_RS04700 SM00062 Bacterial periplasmic substrate-binding proteins C_RS04700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C_RS04715 SM00062 Bacterial periplasmic substrate-binding proteins C_RS04715 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C_RS04720 SM00382 ATPases associated with a variety of cellular activities C_RS04735 SM00644 C_RS04735 C_RS04800 SM00382 ATPases associated with a variety of cellular activities C_RS04805 SM00357 Cold shock protein domain C_RS04815 SM00382 ATPases associated with a variety of cellular activities C_RS04815 SM01086 C-terminal, D2-small domain, of ClpB protein C_RS04830 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS04840 SM00382 ATPases associated with a variety of cellular activities C_RS04845 SM00382 ATPases associated with a variety of cellular activities C_RS04855 SM00344 helix_turn_helix ASNC type C_RS04860 SM00843 C_RS04860 C_RS04870 SM00382 ATPases associated with a variety of cellular activities C_RS04880 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS04950 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS04955 SM00411 bacterial (prokaryotic) histone like domain C_RS04960 SM00849 Metallo-beta-lactamase superfamily C_RS04965 SM00382 ATPases associated with a variety of cellular activities C_RS05030 SM00849 Metallo-beta-lactamase superfamily C_RS05065 SM00382 ATPases associated with a variety of cellular activities C_RS05080 SM00062 Bacterial periplasmic substrate-binding proteins C_RS05105 SM00981 C_RS05105 C_RS05110 SM00382 ATPases associated with a variety of cellular activities C_RS05185 SM00851 MGS-like domain C_RS05200 SM00881 CoA binding domain C_RS05205 SM00992 Hemimethylated DNA-binding protein YccV like C_RS05210 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C_RS05285 SM00357 Cold shock protein domain C_RS05290 SM00357 Cold shock protein domain C_RS05310 SM00073 Histidine Phosphotransfer domain C_RS05310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS05310 SM00387 Histidine kinase-like ATPases C_RS05310 SM00388 His Kinase A (phosphoacceptor) domain C_RS05310 SM00448 cheY-homologous receiver domain C_RS05320 SM00448 cheY-homologous receiver domain C_RS05320 SM00862 Transcriptional regulatory protein, C terminal C_RS05345 SM00271 DnaJ molecular chaperone homology domain C_RS05380 SM00903 Flavin reductase like domain C_RS05470 SM00267 diguanylate cyclase C_RS05535 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS05565 SM00825 Beta-ketoacyl synthase C_RS05580 SM00825 Beta-ketoacyl synthase C_RS05635 SM00563 Phosphate acyltransferases C_RS05700 SM00479 C_RS05700 C_RS05770 SM00382 ATPases associated with a variety of cellular activities C_RS05850 SM00052 Putative diguanylate phosphodiesterase C_RS05855 SM00347 helix_turn_helix multiple antibiotic resistance protein C_RS05880 SM00382 ATPases associated with a variety of cellular activities C_RS05895 SM01321 C_RS05895 C_RS05945 SM00833 Cobalamin synthesis protein cobW C-terminal domain C_RS05955 SM00671 Sel1-like repeats. C_RS05985 SM00869 Autotransporter beta-domain C_RS06025 SM00382 ATPases associated with a variety of cellular activities C_RS06065 SM01321 C_RS06065 C_RS06085 SM00481 DNA polymerase alpha chain like domain C_RS06115 SM00421 helix_turn_helix, Lux Regulon C_RS06145 SM00506 Appr-1"-p processing enzyme C_RS06150 SM00155 Phospholipase D. Active site motifs. C_RS06205 SM00450 Rhodanese Homology Domain C_RS06210 SM00867 YceI-like domain C_RS06290 SM00858 C_RS06290 C_RS06335 SM00047 Lysozyme subfamily 2 C_RS06350 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS06360 SM00363 S4 RNA-binding domain C_RS06390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C_RS06405 SM00825 Beta-ketoacyl synthase C_RS06485 SM01321 C_RS06485 C_RS06500 SM00257 Lysin motif C_RS06520 SM00382 ATPases associated with a variety of cellular activities C_RS06665 SM00507 HNH nucleases C_RS06680 SM01321 C_RS06680 C_RS06830 SM00635 Bacterial Ig-like domain 2 C_RS06860 SM00232 JAB/MPN domain C_RS06915 SM00382 ATPases associated with a variety of cellular activities C_RS06930 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C_RS06985 SM00885 D5 N terminal like C_RS07035 SM00387 Histidine kinase-like ATPases C_RS07040 SM00448 cheY-homologous receiver domain C_RS07040 SM00862 Transcriptional regulatory protein, C terminal C_RS07070 SM01329 C_RS07070 C_RS07100 SM01022 C_RS07100 C_RS07130 SM00382 ATPases associated with a variety of cellular activities C_RS07235 SM00530 Helix-turn-helix XRE-family like proteins C_RS07475 SM00382 ATPases associated with a variety of cellular activities C_RS07510 SM00422 helix_turn_helix, mercury resistance C_RS07515 SM00052 Putative diguanylate phosphodiesterase C_RS07515 SM01034 Sensors of blue-light using FAD C_RS07540 SM00052 Putative diguanylate phosphodiesterase C_RS07650 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS07665 SM01005 Alanine racemase, C-terminal domain C_RS07670 SM01091 Transporter associated domain C_RS07710 SM00382 ATPases associated with a variety of cellular activities C_RS07735 SM01120 C_RS07735 C_RS07745 SM00091 PAS domain C_RS07775 SM01400 C_RS07775 C_RS07795 SM00937 C_RS07795 C_RS07850 SM00421 helix_turn_helix, Lux Regulon C_RS07850 SM00448 cheY-homologous receiver domain C_RS07855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS07855 SM00387 Histidine kinase-like ATPases C_RS07870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS07900 SM00849 Metallo-beta-lactamase superfamily C_RS07950 SM00448 cheY-homologous receiver domain C_RS07960 SM00528 Domain in histone-like proteins of HNS family C_RS08000 SM00382 ATPases associated with a variety of cellular activities C_RS08005 SM00382 ATPases associated with a variety of cellular activities C_RS08015 SM00155 Phospholipase D. Active site motifs. C_RS08095 SM00481 DNA polymerase alpha chain like domain C_RS08110 SM00363 S4 RNA-binding domain C_RS08120 SM00822 C_RS08120 C_RS08135 SM01321 C_RS08135 C_RS08150 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C_RS08150 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C_RS08150 SM00493 C_RS08150 C_RS08185 SM00014 Acid phosphatase homologues C_RS08195 SM00028 Tetratricopeptide repeats C_RS08200 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C_RS08215 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS08215 SM01134 C_RS08215 C_RS08225 SM00052 Putative diguanylate phosphodiesterase C_RS08225 SM00091 PAS domain C_RS08225 SM00267 diguanylate cyclase C_RS08235 SM00357 Cold shock protein domain C_RS08235 SM00955 C_RS08235 C_RS08275 SM00382 ATPases associated with a variety of cellular activities C_RS08280 SM00382 ATPases associated with a variety of cellular activities C_RS08310 SM00382 ATPases associated with a variety of cellular activities C_RS08335 SM00450 Rhodanese Homology Domain C_RS08340 SM00642 Alpha-amylase domain C_RS08385 SM00382 ATPases associated with a variety of cellular activities C_RS08395 SM00354 helix_turn _helix lactose operon repressor C_RS08410 SM00091 PAS domain C_RS08410 SM00382 ATPases associated with a variety of cellular activities C_RS08420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C_RS08470 SM00100 Cyclic nucleotide-monophosphate binding domain C_RS08470 SM00419 helix_turn_helix, cAMP Regulatory protein C_RS08490 SM00342 helix_turn_helix, arabinose operon control protein C_RS08505 SM00463 Small MutS-related domain C_RS08510 SM00091 PAS domain C_RS08510 SM00267 diguanylate cyclase C_RS08525 SM00487 DEAD-like helicases superfamily C_RS08525 SM00490 helicase superfamily c-terminal domain C_RS08565 SM00890 Domain of unknown function C_RS08625 SM00195 Dual specificity phosphatase, catalytic domain C_RS08625 SM00404 Protein tyrosine phosphatase, catalytic domain motif C_RS08635 SM00382 ATPases associated with a variety of cellular activities C_RS08635 SM00487 DEAD-like helicases superfamily C_RS08635 SM00490 helicase superfamily c-terminal domain C_RS08635 SM00847 Helicase associated domain (HA2) Add an annotation C_RS08650 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C_RS08665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C_RS08675 SM01150 C_RS08675 C_RS08725 SM00530 Helix-turn-helix XRE-family like proteins C_RS08740 SM00530 Helix-turn-helix XRE-family like proteins C_RS08745 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS08755 SM00382 ATPases associated with a variety of cellular activities C_RS08865 SM01351 C_RS08865 C_RS08895 SM00903 Flavin reductase like domain C_RS08925 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS08940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS08960 SM00530 Helix-turn-helix XRE-family like proteins C_RS08970 SM00829 Enoylreductase C_RS08975 SM00919 Malic enzyme, NAD binding domain C_RS08975 SM01274 C_RS08975 C_RS09050 SM00342 helix_turn_helix, arabinose operon control protein C_RS09120 SM00530 Helix-turn-helix XRE-family like proteins C_RS09145 SM00267 diguanylate cyclase C_RS09180 SM00347 helix_turn_helix multiple antibiotic resistance protein C_RS09185 SM00342 helix_turn_helix, arabinose operon control protein C_RS09220 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS09220 SM00866 C_RS09220 C_RS09245 SM00267 diguanylate cyclase C_RS09265 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS09265 SM00895 C_RS09265 C_RS09290 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C_RS09320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS09325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS09405 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C_RS09405 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C_RS09430 SM00448 cheY-homologous receiver domain C_RS09430 SM00862 Transcriptional regulatory protein, C terminal C_RS09435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS09435 SM00387 Histidine kinase-like ATPases C_RS09435 SM00388 His Kinase A (phosphoacceptor) domain C_RS09490 SM00354 helix_turn _helix lactose operon repressor C_RS09550 SM00900 C_RS09550 C_RS09560 SM00478 endonuclease III C_RS09560 SM00525 C_RS09560 C_RS09585 SM00363 S4 RNA-binding domain C_RS09610 SM00347 helix_turn_helix multiple antibiotic resistance protein C_RS09660 SM00479 C_RS09660 C_RS09695 SM00354 helix_turn _helix lactose operon repressor C_RS09770 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain C_RS09795 SM00257 Lysin motif C_RS09815 SM00382 ATPases associated with a variety of cellular activities C_RS09875 SM00882 Coenzyme A transferase C_RS09885 SM00342 helix_turn_helix, arabinose operon control protein C_RS09895 SM00893 Electron transfer flavoprotein domain C_RS09900 SM00893 Electron transfer flavoprotein domain C_RS09960 SM00382 ATPases associated with a variety of cellular activities C_RS09975 SM00411 bacterial (prokaryotic) histone like domain C_RS10010 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C_RS10070 SM01060 C_RS10070 C_RS10085 SM00342 helix_turn_helix, arabinose operon control protein C_RS10120 SM00465 GIY-YIG type nucleases (URI domain) C_RS10195 SM00382 ATPases associated with a variety of cellular activities C_RS10200 SM00450 Rhodanese Homology Domain C_RS10220 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C_RS10225 SM00671 Sel1-like repeats. C_RS10240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C_RS10240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C_RS10240 SM00493 C_RS10240 C_RS10270 SM00870 C_RS10270 C_RS10285 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS10285 SM01134 C_RS10285 C_RS10305 SM00829 Enoylreductase C_RS10330 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C_RS10350 SM00763 PrkA AAA domain C_RS10360 SM00267 diguanylate cyclase C_RS10365 SM00267 diguanylate cyclase C_RS10385 SM00342 helix_turn_helix, arabinose operon control protein C_RS10405 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C_RS10405 SM00267 diguanylate cyclase C_RS10445 SM00341 Helicase and RNase D C-terminal C_RS10445 SM00474 3'-5' exonuclease C_RS10465 SM00487 DEAD-like helicases superfamily C_RS10465 SM00491 C_RS10465 C_RS10505 SM00052 Putative diguanylate phosphodiesterase C_RS10510 SM01091 Transporter associated domain C_RS10555 SM00357 Cold shock protein domain C_RS10585 SM00346 helix_turn_helix isocitrate lyase regulation C_RS10600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C_RS10600 SM00245 tail specific protease C_RS10605 SM00945 ProQ/FINO family C_RS10610 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C_RS10675 SM00479 C_RS10675 C_RS10750 SM00257 Lysin motif C_RS10760 SM00382 ATPases associated with a variety of cellular activities C_RS10770 SM00382 ATPases associated with a variety of cellular activities C_RS10775 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C_RS10850 SM00836 DALR anticodon binding domain C_RS10850 SM01016 Arginyl tRNA synthetase N terminal dom C_RS10875 SM00448 cheY-homologous receiver domain C_RS10880 SM00448 cheY-homologous receiver domain C_RS10885 SM00138 Methyltransferase, chemotaxis proteins C_RS10895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C_RS10895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS10895 SM00319 Homologues of the ligand binding domain of Tar C_RS10900 SM00260 Two component signalling adaptor domain C_RS10905 SM00073 Histidine Phosphotransfer domain C_RS10905 SM00260 Two component signalling adaptor domain C_RS10905 SM00387 Histidine kinase-like ATPases C_RS10905 SM01231 C_RS10905 C_RS10950 SM00382 ATPases associated with a variety of cellular activities C_RS11020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C_RS11020 SM00465 GIY-YIG type nucleases (URI domain) C_RS11025 SM00421 helix_turn_helix, Lux Regulon C_RS11025 SM00448 cheY-homologous receiver domain C_RS11040 SM00421 helix_turn_helix, Lux Regulon C_RS11045 SM00382 ATPases associated with a variety of cellular activities C_RS11060 SM01321 C_RS11060 C_RS11065 SM00062 Bacterial periplasmic substrate-binding proteins C_RS11065 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C_RS11100 SM00642 Alpha-amylase domain C_RS11130 SM00342 helix_turn_helix, arabinose operon control protein C_RS11170 SM00382 ATPases associated with a variety of cellular activities C_RS11220 SM00421 helix_turn_helix, Lux Regulon C_RS11240 SM00267 diguanylate cyclase C_RS11270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C_RS11300 SM00387 Histidine kinase-like ATPases C_RS11300 SM00388 His Kinase A (phosphoacceptor) domain C_RS11305 SM00448 cheY-homologous receiver domain C_RS11305 SM00862 Transcriptional regulatory protein, C terminal C_RS11310 SM00095 Transthyretin C_RS11365 SM00255 Toll - interleukin 1 - resistance C_RS11425 SM00528 Domain in histone-like proteins of HNS family C_RS11490 SM00382 ATPases associated with a variety of cellular activities C_RS11495 SM00382 ATPases associated with a variety of cellular activities C_RS11500 SM00342 helix_turn_helix, arabinose operon control protein C_RS11510 SM01321 C_RS11510 C_RS11515 SM00823 Phosphopantetheine attachment site C_RS11555 SM00634 Bacterial Ig-like domain (group 1) C_RS11640 SM00825 Beta-ketoacyl synthase C_RS11660 SM00823 Phosphopantetheine attachment site C_RS11660 SM00825 Beta-ketoacyl synthase C_RS11665 SM00823 Phosphopantetheine attachment site C_RS11670 SM00825 Beta-ketoacyl synthase C_RS11670 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C_RS11675 SM00823 Phosphopantetheine attachment site C_RS11680 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C_RS11700 SM00823 Phosphopantetheine attachment site C_RS11700 SM00825 Beta-ketoacyl synthase C_RS11710 SM00421 helix_turn_helix, Lux Regulon C_RS11770 SM00470 ParB-like nuclease domain C_RS11805 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS11895 SM00382 ATPases associated with a variety of cellular activities C_RS11910 SM00382 ATPases associated with a variety of cellular activities C_RS11935 SM00382 ATPases associated with a variety of cellular activities C_RS12040 SM00871 Bacterial transcription activator, effector binding domain C_RS12045 SM00936 Penicillin-binding protein 5, C-terminal domain C_RS12050 SM00479 C_RS12050 C_RS12125 SM00984 UDP binding domain C_RS12130 SM01350 C_RS12130 C_RS12285 SM01091 Transporter associated domain C_RS12305 SM00052 Putative diguanylate phosphodiesterase C_RS12305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C_RS12305 SM00091 PAS domain C_RS12305 SM00267 diguanylate cyclase C_RS12310 SM00478 endonuclease III C_RS12310 SM01009 AlkA N-terminal domain C_RS12330 SM00327 von Willebrand factor (vWF) type A domain C_RS12355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS12355 SM00387 Histidine kinase-like ATPases C_RS12355 SM00388 His Kinase A (phosphoacceptor) domain C_RS12360 SM00448 cheY-homologous receiver domain C_RS12360 SM00862 Transcriptional regulatory protein, C terminal C_RS12400 SM00046 Diacylglycerol kinase catalytic domain (presumed) C_RS12405 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS12405 SM01134 C_RS12405 C_RS12410 SM00829 Enoylreductase C_RS12440 SM01321 C_RS12440 C_RS12445 SM01133 C_RS12445 C_RS12465 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS12465 SM00866 C_RS12465 C_RS12470 SM00641 Glycosyl hydrolases family 25 C_RS12520 SM01321 C_RS12520 C_RS12540 SM00773 Proposed nucleic acid binding domain C_RS12560 SM00382 ATPases associated with a variety of cellular activities C_RS12570 SM00327 von Willebrand factor (vWF) type A domain C_RS12590 SM00448 cheY-homologous receiver domain C_RS12590 SM00850 LytTr DNA-binding domain C_RS12595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C_RS12600 SM00422 helix_turn_helix, mercury resistance C_RS12615 SM00382 ATPases associated with a variety of cellular activities C_RS12630 SM01217 C_RS12630 C_RS12715 SM00382 ATPases associated with a variety of cellular activities C_RS12725 SM00354 helix_turn _helix lactose operon repressor C_RS12780 SM00518 AP endonuclease family 2 C_RS12795 SM00100 Cyclic nucleotide-monophosphate binding domain C_RS12840 SM00841 Elongation factor P, C-terminal C_RS12840 SM01185 C_RS12840 C_RS12850 SM00833 Cobalamin synthesis protein cobW C-terminal domain C_RS12855 SM00014 Acid phosphatase homologues C_RS12865 SM00052 Putative diguanylate phosphodiesterase C_RS12885 SM00382 ATPases associated with a variety of cellular activities C_RS12900 SM00363 S4 RNA-binding domain C_RS12905 SM00487 DEAD-like helicases superfamily C_RS12905 SM00490 helicase superfamily c-terminal domain C_RS12960 SM00421 helix_turn_helix, Lux Regulon C_RS12960 SM00448 cheY-homologous receiver domain C_RS13000 SM00382 ATPases associated with a variety of cellular activities C_RS13025 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS13055 SM00382 ATPases associated with a variety of cellular activities C_RS13065 SM00342 helix_turn_helix, arabinose operon control protein C_RS13085 SM00387 Histidine kinase-like ATPases C_RS13090 SM00421 helix_turn_helix, Lux Regulon C_RS13090 SM00448 cheY-homologous receiver domain C_RS13095 SM00387 Histidine kinase-like ATPases C_RS13095 SM00388 His Kinase A (phosphoacceptor) domain C_RS13095 SM00448 cheY-homologous receiver domain C_RS13100 SM00091 PAS domain C_RS13100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS13100 SM00387 Histidine kinase-like ATPases C_RS13100 SM00388 His Kinase A (phosphoacceptor) domain C_RS13105 SM00382 ATPases associated with a variety of cellular activities C_RS13105 SM00448 cheY-homologous receiver domain C_RS13110 SM00882 Coenzyme A transferase C_RS13115 SM00882 Coenzyme A transferase C_RS13140 SM01359 C_RS13140 C_RS13140 SM01360 C_RS13140 C_RS13155 SM00434 DNA Topoisomerase IV C_RS13165 SM00869 Autotransporter beta-domain C_RS13235 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C_RS13240 SM00346 helix_turn_helix isocitrate lyase regulation C_RS13245 SM00852 Probable molybdopterin binding domain C_RS13310 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C_RS13345 SM00849 Metallo-beta-lactamase superfamily C_RS13350 SM00327 von Willebrand factor (vWF) type A domain C_RS13400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS13400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C_RS13405 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C_RS13440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C_RS13505 SM00905 Dihydroneopterin aldolase C_RS13515 SM00382 ATPases associated with a variety of cellular activities C_RS13530 SM00062 Bacterial periplasmic substrate-binding proteins C_RS13580 SM00859 Semialdehyde dehydrogenase, NAD binding domain C_RS13600 SM00825 Beta-ketoacyl synthase C_RS13640 SM00463 Small MutS-related domain C_RS13725 SM00935 Outer membrane protein (OmpH-like) C_RS13735 SM00421 helix_turn_helix, Lux Regulon C_RS13775 SM00421 helix_turn_helix, Lux Regulon C_RS13775 SM00448 cheY-homologous receiver domain C_RS13780 SM00062 Bacterial periplasmic substrate-binding proteins C_RS13780 SM00073 Histidine Phosphotransfer domain C_RS13780 SM00387 Histidine kinase-like ATPases C_RS13780 SM00388 His Kinase A (phosphoacceptor) domain C_RS13780 SM00448 cheY-homologous receiver domain C_RS13835 SM00387 Histidine kinase-like ATPases C_RS13840 SM00448 cheY-homologous receiver domain C_RS13840 SM00850 LytTr DNA-binding domain C_RS13845 SM00342 helix_turn_helix, arabinose operon control protein C_RS13905 SM00052 Putative diguanylate phosphodiesterase C_RS13905 SM00267 diguanylate cyclase C_RS13995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C_RS13995 SM00292 breast cancer carboxy-terminal domain C_RS13995 SM00532 Ligase N family C_RS14000 SM00771 ZipA, C-terminal domain (FtsZ-binding) C_RS14045 SM00382 ATPases associated with a variety of cellular activities C_RS14065 SM00822 C_RS14065 C_RS14100 SM00646 C_RS14100 C_RS14110 SM00342 helix_turn_helix, arabinose operon control protein C_RS14115 SM00877 C_RS14115 C_RS14120 SM00877 C_RS14120 C_RS14165 SM00877 C_RS14165 C_RS14190 SM00877 C_RS14190 C_RS14195 SM00919 Malic enzyme, NAD binding domain C_RS14195 SM01274 C_RS14195 C_RS14205 SM00861 Transketolase, pyrimidine binding domain C_RS14225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS14225 SM00387 Histidine kinase-like ATPases C_RS14285 SM01130 C_RS14285 C_RS14350 SM00052 Putative diguanylate phosphodiesterase C_RS14350 SM00267 diguanylate cyclase C_RS14380 SM00116 Domain in cystathionine beta-synthase and other proteins. C_RS14380 SM01240 C_RS14380 C_RS14415 SM00564 beta-propeller repeat C_RS14435 SM00530 Helix-turn-helix XRE-family like proteins C_RS14445 SM00562 C_RS14445 C_RS14455 SM01359 C_RS14455 C_RS14455 SM01360 C_RS14455 C_RS14460 SM00450 Rhodanese Homology Domain C_RS14490 SM00271 DnaJ molecular chaperone homology domain C_RS14550 SM00829 Enoylreductase C_RS14560 SM00382 ATPases associated with a variety of cellular activities C_RS14570 SM00028 Tetratricopeptide repeats C_RS14590 SM00938 Nitrogen regulatory protein P-II C_RS14595 SM00382 ATPases associated with a variety of cellular activities C_RS14595 SM00448 cheY-homologous receiver domain C_RS14605 SM00387 Histidine kinase-like ATPases C_RS14605 SM00388 His Kinase A (phosphoacceptor) domain C_RS14610 SM01211 C_RS14610 C_RS14615 SM00062 Bacterial periplasmic substrate-binding proteins C_RS14670 SM00358 Double-stranded RNA binding motif C_RS14670 SM00535 Ribonuclease III family C_RS14720 SM00487 DEAD-like helicases superfamily C_RS14720 SM00490 helicase superfamily c-terminal domain C_RS14740 SM00986 Uracil DNA glycosylase superfamily C_RS14740 SM00987 UreE urease accessory protein, C-terminal domain C_RS14745 SM00967 RNA 2'-O ribose methyltransferase substrate binding C_RS14760 SM01144 C_RS14760 C_RS14765 SM00881 CoA binding domain C_RS14770 SM00155 Phospholipase D. Active site motifs. C_RS14805 SM00382 ATPases associated with a variety of cellular activities C_RS14805 SM01086 C-terminal, D2-small domain, of ClpB protein C_RS14815 SM00363 S4 RNA-binding domain C_RS14835 SM00830 Chorismate mutase type II C_RS14840 SM00830 Chorismate mutase type II C_RS14860 SM00267 diguanylate cyclase C_RS14890 SM00382 ATPases associated with a variety of cellular activities C_RS14890 SM00962 SRP54-type protein, GTPase domain C_RS14890 SM00963 SRP54-type protein, helical bundle domain C_RS14900 SM01091 Transporter associated domain C_RS14955 SM00857 Resolvase, N terminal domain C_RS14985 SM01321 C_RS14985 C_RS15035 SM00635 Bacterial Ig-like domain 2 C_RS15120 SM00357 Cold shock protein domain C_RS15145 SM00357 Cold shock protein domain C_RS15150 SM00357 Cold shock protein domain C_RS15160 SM00507 HNH nucleases C_RS15165 SM01252 C_RS15165 C_RS15205 SM00530 Helix-turn-helix XRE-family like proteins C_RS15275 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS15275 SM00895 C_RS15275 C_RS15280 SM00257 Lysin motif C_RS15280 SM00749 bacterial OsmY and nodulation domain C_RS15290 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C_RS15295 SM00450 Rhodanese Homology Domain C_RS15300 SM00528 Domain in histone-like proteins of HNS family C_RS15320 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS15350 SM00382 ATPases associated with a variety of cellular activities C_RS15380 SM00347 helix_turn_helix multiple antibiotic resistance protein C_RS15475 SM00382 ATPases associated with a variety of cellular activities C_RS15515 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS15515 SM01134 C_RS15515 C_RS15525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C_RS15525 SM00382 ATPases associated with a variety of cellular activities C_RS15555 SM00530 Helix-turn-helix XRE-family like proteins C_RS15645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C_RS15645 SM00382 ATPases associated with a variety of cellular activities C_RS15660 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C_RS15660 SM00534 ATPase domain of DNA mismatch repair MUTS family C_RS15670 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS15670 SM01134 C_RS15670 C_RS15685 SM01007 Class II Aldolase and Adducin N-terminal domain C_RS15700 SM00849 Metallo-beta-lactamase superfamily C_RS15715 SM00257 Lysin motif C_RS15820 SM00893 Electron transfer flavoprotein domain C_RS15880 SM01192 C_RS15880 C_RS15880 SM01193 C_RS15880 C_RS15895 SM00954 Region found in RelA / SpoT proteins C_RS15905 SM00073 Histidine Phosphotransfer domain C_RS15905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS15905 SM00387 Histidine kinase-like ATPases C_RS15905 SM00388 His Kinase A (phosphoacceptor) domain C_RS15905 SM00448 cheY-homologous receiver domain C_RS15915 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C_RS15970 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C_RS15970 SM00475 5'-3' exonuclease C_RS15980 SM01007 Class II Aldolase and Adducin N-terminal domain C_RS16005 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS16005 SM01134 C_RS16005 C_RS16045 SM00925 MltA specific insert domain C_RS16095 SM00382 ATPases associated with a variety of cellular activities C_RS16095 SM01086 C-terminal, D2-small domain, of ClpB protein C_RS16180 SM01061 CAT RNA binding domain C_RS16185 SM00646 C_RS16185 C_RS16195 SM00382 ATPases associated with a variety of cellular activities C_RS16245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C_RS16265 SM00927 DNA mismatch repair enzyme MutH C_RS16290 SM00563 Phosphate acyltransferases C_RS16295 SM01321 C_RS16295 C_RS16300 SM00354 helix_turn _helix lactose operon repressor C_RS16350 SM00257 Lysin motif C_RS16355 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C_RS16360 SM01092 CO dehydrogenase flavoprotein C-terminal domain C_RS16370 SM00091 PAS domain C_RS16370 SM00382 ATPases associated with a variety of cellular activities C_RS16425 SM01092 CO dehydrogenase flavoprotein C-terminal domain C_RS16430 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C_RS16480 SM01321 C_RS16480 C_RS16490 SM00937 C_RS16490 C_RS16535 SM01022 C_RS16535 C_RS16570 SM01011 Aminopeptidase P, N-terminal domain C_RS16645 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C_RS16665 SM00382 ATPases associated with a variety of cellular activities C_RS16670 SM00382 ATPases associated with a variety of cellular activities C_RS16710 SM00861 Transketolase, pyrimidine binding domain C_RS16760 SM00731 SprT homologues. C_RS16785 SM00732 Likely ribonuclease with RNase H fold. C_RS16790 SM00382 ATPases associated with a variety of cellular activities C_RS16805 SM01152 C_RS16805 C_RS16815 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS16825 SM00870 C_RS16825 C_RS16850 SM00478 endonuclease III C_RS16850 SM00525 C_RS16850 C_RS16890 SM00028 Tetratricopeptide repeats C_RS16920 SM00387 Histidine kinase-like ATPases C_RS16920 SM00388 His Kinase A (phosphoacceptor) domain C_RS16925 SM00448 cheY-homologous receiver domain C_RS16925 SM00862 Transcriptional regulatory protein, C terminal C_RS16955 SM00382 ATPases associated with a variety of cellular activities C_RS16995 SM00347 helix_turn_helix multiple antibiotic resistance protein C_RS17135 SM00382 ATPases associated with a variety of cellular activities C_RS17200 SM00869 Autotransporter beta-domain C_RS17225 SM01006 Siderophore biosynthesis protein domain C_RS17280 SM01130 C_RS17280 C_RS17360 SM00869 Autotransporter beta-domain C_RS17515 SM00028 Tetratricopeptide repeats C_RS17530 SM00382 ATPases associated with a variety of cellular activities C_RS17595 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS17595 SM00895 C_RS17595 C_RS17775 SM00342 helix_turn_helix, arabinose operon control protein C_RS17805 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS17810 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS17810 SM00895 C_RS17810 C_RS17850 SM00563 Phosphate acyltransferases C_RS17855 SM00434 DNA Topoisomerase IV C_RS17865 SM00871 Bacterial transcription activator, effector binding domain C_RS17875 SM00448 cheY-homologous receiver domain C_RS17875 SM00862 Transcriptional regulatory protein, C terminal C_RS17880 SM00387 Histidine kinase-like ATPases C_RS17880 SM00388 His Kinase A (phosphoacceptor) domain C_RS17930 SM00382 ATPases associated with a variety of cellular activities C_RS17940 SM00387 Histidine kinase-like ATPases C_RS17940 SM00433 TopoisomeraseII C_RS18055 SM00244 prohibitin homologues C_RS18075 SM01118 C_RS18075 C_RS18080 SM01321 C_RS18080 C_RS18095 SM00287 Bacterial SH3 domain homologues C_RS18110 SM00905 Dihydroneopterin aldolase C_RS18115 SM01207 C_RS18115 C_RS18150 SM00400 zinc finger C_RS18150 SM00493 C_RS18150 C_RS18150 SM00766 DNA primase DnaG DnaB-binding C_RS18180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C_RS18180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C_RS18195 SM00354 helix_turn _helix lactose operon repressor C_RS18200 SM01038 Beta galactosidase small chain C_RS18230 SM00530 Helix-turn-helix XRE-family like proteins C_RS18275 SM00858 C_RS18275 C_RS18290 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS18290 SM00895 C_RS18290 C_RS18425 SM00858 C_RS18425 C_RS18440 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS18440 SM01134 C_RS18440 C_RS18525 SM00749 bacterial OsmY and nodulation domain C_RS18535 SM00859 Semialdehyde dehydrogenase, NAD binding domain C_RS18545 SM00465 GIY-YIG type nucleases (URI domain) C_RS18585 SM00487 DEAD-like helicases superfamily C_RS18585 SM00490 helicase superfamily c-terminal domain C_RS18590 SM00028 Tetratricopeptide repeats C_RS18595 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS18595 SM00322 K homology RNA-binding domain C_RS18600 SM01387 C_RS18600 C_RS18620 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS18675 SM01103 C_RS18675 C_RS18750 SM00382 ATPases associated with a variety of cellular activities C_RS18780 SM00382 ATPases associated with a variety of cellular activities C_RS18825 SM00073 Histidine Phosphotransfer domain C_RS18825 SM00091 PAS domain C_RS18825 SM00387 Histidine kinase-like ATPases C_RS18825 SM00388 His Kinase A (phosphoacceptor) domain C_RS18825 SM00448 cheY-homologous receiver domain C_RS18830 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS18865 SM01130 C_RS18865 C_RS18870 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS18870 SM00895 C_RS18870 C_RS18905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C_RS18910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C_RS18965 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS18995 SM00052 Putative diguanylate phosphodiesterase C_RS18995 SM00267 diguanylate cyclase C_RS19000 SM00829 Enoylreductase C_RS19020 SM00878 Biotin carboxylase C-terminal domain C_RS19040 SM00382 ATPases associated with a variety of cellular activities C_RS19055 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS19055 SM01134 C_RS19055 C_RS19130 SM00062 Bacterial periplasmic substrate-binding proteins C_RS19145 SM00382 ATPases associated with a variety of cellular activities C_RS19235 SM00422 helix_turn_helix, mercury resistance C_RS19250 SM00662 RNA polymerases D C_RS19255 SM00363 S4 RNA-binding domain C_RS19255 SM01390 C_RS19255 C_RS19320 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C_RS19325 SM01374 C_RS19325 C_RS19345 SM00322 K homology RNA-binding domain C_RS19360 SM01382 C_RS19360 C_RS19360 SM01383 C_RS19360 C_RS19380 SM01403 C_RS19380 C_RS19405 SM00382 ATPases associated with a variety of cellular activities C_RS19465 SM00495 Chitin-binding domain type 3 C_RS19475 SM00838 Elongation factor G C-terminus C_RS19475 SM00889 Elongation factor G, domain IV C_RS19540 SM00382 ATPases associated with a variety of cellular activities C_RS19570 SM00100 Cyclic nucleotide-monophosphate binding domain C_RS19570 SM00419 helix_turn_helix, cAMP Regulatory protein C_RS19710 SM00965 Secretin and TonB N terminus short domain C_RS19755 SM00363 S4 RNA-binding domain C_RS19790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS19790 SM00387 Histidine kinase-like ATPases C_RS19790 SM00388 His Kinase A (phosphoacceptor) domain C_RS19795 SM00448 cheY-homologous receiver domain C_RS19795 SM00862 Transcriptional regulatory protein, C terminal C_RS19805 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS19805 SM00732 Likely ribonuclease with RNase H fold. C_RS19810 SM00899 C_RS19810 C_RS19860 SM00421 helix_turn_helix, Lux Regulon C_RS19875 SM00382 ATPases associated with a variety of cellular activities C_RS19880 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS19880 SM01134 C_RS19880 C_RS19890 SM00450 Rhodanese Homology Domain C_RS19965 SM00642 Alpha-amylase domain C_RS19970 SM00642 Alpha-amylase domain C_RS19975 SM00859 Semialdehyde dehydrogenase, NAD binding domain C_RS19990 SM00487 DEAD-like helicases superfamily C_RS19990 SM00490 helicase superfamily c-terminal domain C_RS20005 SM00354 helix_turn _helix lactose operon repressor C_RS20060 SM00382 ATPases associated with a variety of cellular activities C_RS20085 SM00382 ATPases associated with a variety of cellular activities C_RS20090 SM00382 ATPases associated with a variety of cellular activities C_RS20135 SM00382 ATPases associated with a variety of cellular activities C_RS20140 SM00382 ATPases associated with a variety of cellular activities C_RS20140 SM00962 SRP54-type protein, GTPase domain C_RS20140 SM00963 SRP54-type protein, helical bundle domain C_RS20215 SM00382 ATPases associated with a variety of cellular activities C_RS20220 SM00382 ATPases associated with a variety of cellular activities C_RS20230 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS20230 SM00866 C_RS20230 C_RS20270 SM00382 ATPases associated with a variety of cellular activities C_RS20350 SM00421 helix_turn_helix, Lux Regulon C_RS20375 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS20395 SM00382 ATPases associated with a variety of cellular activities C_RS20440 SM00342 helix_turn_helix, arabinose operon control protein C_RS20445 SM00342 helix_turn_helix, arabinose operon control protein C_RS20455 SM01235 C_RS20455 C_RS20465 SM00421 helix_turn_helix, Lux Regulon C_RS20490 SM00052 Putative diguanylate phosphodiesterase C_RS20515 SM00052 Putative diguanylate phosphodiesterase C_RS20515 SM00267 diguanylate cyclase C_RS20520 SM00028 Tetratricopeptide repeats C_RS20585 SM00382 ATPases associated with a variety of cellular activities C_RS20590 SM00382 ATPases associated with a variety of cellular activities C_RS20670 SM00530 Helix-turn-helix XRE-family like proteins C_RS20675 SM00357 Cold shock protein domain C_RS20730 SM00382 ATPases associated with a variety of cellular activities C_RS20740 SM00342 helix_turn_helix, arabinose operon control protein C_RS20745 SM00047 Lysozyme subfamily 2 C_RS20750 SM00642 Alpha-amylase domain C_RS20770 SM00346 helix_turn_helix isocitrate lyase regulation C_RS20810 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C_RS20820 SM01007 Class II Aldolase and Adducin N-terminal domain C_RS20905 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS20905 SM00895 C_RS20905 C_RS20920 SM00971 Serine acetyltransferase, N-terminal C_RS20940 SM00450 Rhodanese Homology Domain C_RS20965 SM00829 Enoylreductase C_RS21045 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C_RS21045 SM01232 C_RS21045 C_RS21105 SM00532 Ligase N family C_RS21110 SM00072 Guanylate kinase homologues. C_RS21115 SM01409 C_RS21115 C_RS21120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C_RS21120 SM00954 Region found in RelA / SpoT proteins C_RS21130 SM00487 DEAD-like helicases superfamily C_RS21130 SM00490 helicase superfamily c-terminal domain C_RS21215 SM00354 helix_turn _helix lactose operon repressor C_RS21400 SM00877 C_RS21400 C_RS21410 SM00877 C_RS21410 C_RS21450 SM00342 helix_turn_helix, arabinose operon control protein C_RS21450 SM00448 cheY-homologous receiver domain C_RS21460 SM00877 C_RS21460 C_RS21645 SM00387 Histidine kinase-like ATPases C_RS21650 SM00421 helix_turn_helix, Lux Regulon C_RS21650 SM00448 cheY-homologous receiver domain C_RS21710 SM00342 helix_turn_helix, arabinose operon control protein C_RS21755 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C_RS21770 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS21770 SM00895 C_RS21770 C_RS21795 SM00387 Histidine kinase-like ATPases C_RS21795 SM00433 TopoisomeraseII C_RS21805 SM00480 DNA polymerase III beta subunit C_RS21825 SM01234 C_RS21825 C_RS21915 SM01061 CAT RNA binding domain C_RS21925 SM00382 ATPases associated with a variety of cellular activities C_RS21960 SM00382 ATPases associated with a variety of cellular activities C_RS22005 SM01228 C_RS22005 C_RS22015 SM00344 helix_turn_helix ASNC type C_RS22025 SM00327 von Willebrand factor (vWF) type A domain C_RS22030 SM00382 ATPases associated with a variety of cellular activities C_RS22045 SM00382 ATPases associated with a variety of cellular activities C_RS22065 SM00354 helix_turn _helix lactose operon repressor C_RS22075 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS22075 SM00895 C_RS22075 C_RS22180 SM00487 DEAD-like helicases superfamily C_RS22180 SM00490 helicase superfamily c-terminal domain C_RS22195 SM00357 Cold shock protein domain C_RS22195 SM00382 ATPases associated with a variety of cellular activities C_RS22195 SM00959 Rho termination factor, N-terminal domain C_RS22220 SM00984 UDP binding domain C_RS22325 SM01219 C_RS22325 C_RS22415 SM00341 Helicase and RNase D C-terminal C_RS22415 SM00487 DEAD-like helicases superfamily C_RS22415 SM00490 helicase superfamily c-terminal domain C_RS22415 SM00956 C_RS22415 C_RS22485 SM00861 Transketolase, pyrimidine binding domain C_RS22575 SM00346 helix_turn_helix isocitrate lyase regulation C_RS22620 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C_RS22720 SM00563 Phosphate acyltransferases C_RS22745 SM00729 Elongator protein 3, MiaB family, Radical SAM C_RS22755 SM00382 ATPases associated with a variety of cellular activities C_RS22755 SM00448 cheY-homologous receiver domain C_RS22760 SM00091 PAS domain C_RS22760 SM00387 Histidine kinase-like ATPases C_RS22760 SM00388 His Kinase A (phosphoacceptor) domain C_RS22765 SM01230 C_RS22765 C_RS22780 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS22780 SM00866 C_RS22780 C_RS22795 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS22795 SM01134 C_RS22795 C_RS22810 SM01133 C_RS22810 C_RS22815 SM00829 Enoylreductase C_RS22865 SM00530 Helix-turn-helix XRE-family like proteins C_RS22905 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS22930 SM01007 Class II Aldolase and Adducin N-terminal domain C_RS22950 SM00342 helix_turn_helix, arabinose operon control protein C_RS22955 SM00342 helix_turn_helix, arabinose operon control protein C_RS22985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS22985 SM00387 Histidine kinase-like ATPases C_RS22985 SM00388 His Kinase A (phosphoacceptor) domain C_RS22990 SM00448 cheY-homologous receiver domain C_RS22990 SM00862 Transcriptional regulatory protein, C terminal C_RS23080 SM00382 ATPases associated with a variety of cellular activities C_RS23080 SM01086 C-terminal, D2-small domain, of ClpB protein C_RS23095 SM00354 helix_turn _helix lactose operon repressor C_RS23100 SM00487 DEAD-like helicases superfamily C_RS23100 SM00490 helicase superfamily c-terminal domain C_RS23220 SM00342 helix_turn_helix, arabinose operon control protein C_RS23240 SM00859 Semialdehyde dehydrogenase, NAD binding domain C_RS23255 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C_RS23380 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C_RS23380 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C_RS23385 SM00649 Ribosomal protein L11/L12 C_RS23410 SM00663 RNA polymerase I subunit A N-terminus C_RS23415 SM00876 Biotin and Thiamin Synthesis associated domain C_RS23470 SM00411 bacterial (prokaryotic) histone like domain C_RS23485 SM00387 Histidine kinase-like ATPases C_RS23485 SM00388 His Kinase A (phosphoacceptor) domain C_RS23490 SM00382 ATPases associated with a variety of cellular activities C_RS23490 SM00448 cheY-homologous receiver domain C_RS23495 SM01209 C_RS23495 C_RS23495 SM01210 C_RS23495 C_RS23500 SM00798 AICARFT/IMPCHase bienzyme C_RS23500 SM00851 MGS-like domain C_RS23565 SM00346 helix_turn_helix isocitrate lyase regulation C_RS23570 SM01018 B12 binding domain C_RS23635 SM00363 S4 RNA-binding domain C_RS23710 SM00382 ATPases associated with a variety of cellular activities C_RS23735 SM00563 Phosphate acyltransferases C_RS23775 SM00829 Enoylreductase C_RS23795 SM00882 Coenzyme A transferase C_RS23800 SM00354 helix_turn _helix lactose operon repressor C_RS23805 SM00382 ATPases associated with a variety of cellular activities C_RS23815 SM01005 Alanine racemase, C-terminal domain C_RS23835 SM00861 Transketolase, pyrimidine binding domain C_RS23855 SM00881 CoA binding domain C_RS23870 SM00382 ATPases associated with a variety of cellular activities C_RS23870 SM00448 cheY-homologous receiver domain C_RS23875 SM00387 Histidine kinase-like ATPases C_RS23910 SM00052 Putative diguanylate phosphodiesterase C_RS23915 SM00342 helix_turn_helix, arabinose operon control protein C_RS23920 SM00422 helix_turn_helix, mercury resistance C_RS23995 SM00028 Tetratricopeptide repeats C_RS24005 SM00671 Sel1-like repeats. C_RS24010 SM00382 ATPases associated with a variety of cellular activities C_RS24015 SM00382 ATPases associated with a variety of cellular activities C_RS24040 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C_RS24065 SM00849 Metallo-beta-lactamase superfamily C_RS24085 SM00382 ATPases associated with a variety of cellular activities C_RS24120 SM00072 Guanylate kinase homologues. C_RS24130 SM00382 ATPases associated with a variety of cellular activities C_RS24135 SM00382 ATPases associated with a variety of cellular activities C_RS24160 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS24160 SM00866 C_RS24160 C_RS24175 SM00382 ATPases associated with a variety of cellular activities C_RS24210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS24210 SM00387 Histidine kinase-like ATPases C_RS24210 SM00388 His Kinase A (phosphoacceptor) domain C_RS24215 SM00448 cheY-homologous receiver domain C_RS24215 SM00862 Transcriptional regulatory protein, C terminal C_RS24230 SM00342 helix_turn_helix, arabinose operon control protein C_RS24240 SM00342 helix_turn_helix, arabinose operon control protein C_RS24275 SM00448 cheY-homologous receiver domain C_RS24280 SM00091 PAS domain C_RS24280 SM00387 Histidine kinase-like ATPases C_RS24325 SM00862 Transcriptional regulatory protein, C terminal C_RS24345 SM00382 ATPases associated with a variety of cellular activities C_RS24580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS24580 SM00387 Histidine kinase-like ATPases C_RS24580 SM00388 His Kinase A (phosphoacceptor) domain C_RS24585 SM00448 cheY-homologous receiver domain C_RS24690 SM00883 Chaperonin 10 Kd subunit C_RS24715 SM00841 Elongation factor P, C-terminal C_RS24715 SM01185 C_RS24715 C_RS24790 SM00479 C_RS24790 C_RS24825 SM00646 C_RS24825 C_RS24830 SM00853 MutL C terminal dimerisation domain C_RS24830 SM01340 C_RS24830 C_RS24850 SM00244 prohibitin homologues C_RS24855 SM00244 prohibitin homologues C_RS24865 SM00788 Adenylosuccinate synthetase C_RS24875 SM00316 Ribosomal protein S1-like RNA-binding domain C_RS24875 SM00357 Cold shock protein domain C_RS24875 SM00955 C_RS24875 C_RS24880 SM00967 RNA 2'-O ribose methyltransferase substrate binding C_RS24935 SM00420 helix_turn_helix, Deoxyribose operon repressor C_RS24935 SM01134 C_RS24935 C_RS24960 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C_RS24970 SM01007 Class II Aldolase and Adducin N-terminal domain C_RS25005 SM00530 Helix-turn-helix XRE-family like proteins C_RS25025 SM00882 Coenzyme A transferase C_RS25105 SM01091 Transporter associated domain C_RS25135 SM00671 Sel1-like repeats. C_RS25150 SM00382 ATPases associated with a variety of cellular activities C_RS25205 SM00642 Alpha-amylase domain C_RS25215 SM00354 helix_turn _helix lactose operon repressor C_RS25220 SM00831 Cation transporter/ATPase, N-terminus C_RS25325 SM00354 helix_turn _helix lactose operon repressor C_RS25350 SM00829 Enoylreductase C_RS25380 SM00487 DEAD-like helicases superfamily C_RS25380 SM00490 helicase superfamily c-terminal domain C_RS25520 SM00345 helix_turn_helix gluconate operon transcriptional repressor C_RS25520 SM00895 C_RS25520 C_RS25625 SM00487 DEAD-like helicases superfamily C_RS25635 SM00833 Cobalamin synthesis protein cobW C-terminal domain C_RS25655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C_RS25655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS25655 SM00319 Homologues of the ligand binding domain of Tar C_RS25680 SM00895 C_RS25680 C_RS25685 SM00829 Enoylreductase C_RS25700 SM00382 ATPases associated with a variety of cellular activities C_RS25720 SM00421 helix_turn_helix, Lux Regulon C_RS25725 SM00421 helix_turn_helix, Lux Regulon C_RS25785 SM00749 bacterial OsmY and nodulation domain C_RS25820 SM01133 C_RS25820 C_RS25825 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C_RS25840 SM01321 C_RS25840 C_RS25865 SM00382 ATPases associated with a variety of cellular activities C_RS25870 SM00530 Helix-turn-helix XRE-family like proteins C_RS25880 SM00530 Helix-turn-helix XRE-family like proteins C_RS25885 SM00382 ATPases associated with a variety of cellular activities C_RS25905 SM00855 Phosphoglycerate mutase family C_RS25910 SM00342 helix_turn_helix, arabinose operon control protein C_RS25910 SM00871 Bacterial transcription activator, effector binding domain C_RS25920 SM00448 cheY-homologous receiver domain C_RS25920 SM00862 Transcriptional regulatory protein, C terminal C_RS25925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C_RS25925 SM00387 Histidine kinase-like ATPases C_RS25925 SM00388 His Kinase A (phosphoacceptor) domain C_RS25935 SM00448 cheY-homologous receiver domain C_RS25935 SM00862 Transcriptional regulatory protein, C terminal